Query 034236
Match_columns 100
No_of_seqs 106 out of 515
Neff 6.0
Searched_HMMs 13730
Date Mon Mar 25 19:19:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034236.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/034236hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1y6ia1 a.118.1.22 (A:1-82) Mg 59.7 0.88 6.4E-05 27.1 -0.0 53 47-99 6-62 (82)
2 d1v9va1 a.29.10.1 (A:8-108) Mi 36.4 40 0.0029 20.2 6.9 64 19-82 36-99 (101)
3 d2csba1 a.60.2.4 (A:351-409) T 33.1 7.1 0.00052 21.0 0.9 27 47-73 18-46 (59)
4 d2eiaa2 a.73.1.1 (A:17-147) EI 32.6 23 0.0017 22.3 3.6 32 61-93 50-81 (131)
5 d1nf4a_ a.25.1.1 (A:) Bacterio 31.0 52 0.0038 19.9 6.5 80 8-94 86-168 (169)
6 d1kxpd3 a.126.1.1 (D:405-473) 24.0 58 0.0042 18.1 4.5 30 42-71 11-40 (69)
7 d1ej2a_ c.26.1.3 (A:) Nicotina 19.6 61 0.0044 18.9 3.8 35 45-79 128-166 (167)
8 d1vlha_ c.26.1.3 (A:) Phosphop 19.4 49 0.0036 18.9 3.2 25 46-70 127-153 (157)
9 d1gvfa_ c.1.10.2 (A:) Tagatose 18.5 1.4E+02 0.01 20.3 6.1 41 25-65 217-258 (284)
10 d1f9aa_ c.26.1.3 (A:) Nicotina 17.5 73 0.0053 18.4 3.8 33 46-78 126-162 (164)
No 1
>d1y6ia1 a.118.1.22 (A:1-82) Mg-chelatase cofactor Gun4 {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=59.67 E-value=0.88 Score=27.13 Aligned_cols=53 Identities=15% Similarity=0.166 Sum_probs=40.1
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhCC----CCCcCCCCCCCcccccc
Q 034236 47 DDLRLRFEANKHVTDLDAIDRMIDEAEATYNKWRHP----DPYIGKCFCTGSKHRIL 99 (100)
Q Consensus 47 ~~iR~eFe~nk~vtD~~~I~~Ll~~G~~~L~~~~Hp----~p~~~~~~pgG~~y~~~ 99 (100)
..+|++|..-..=+....|-.|.+.|+.-++...-+ .+..+|+...|.+|++|
T Consensus 6 ~~L~~ql~sgSeK~QLQ~IpqLa~~Ge~G~~vL~eFL~~~~~~~~~t~V~GkaYq~L 62 (82)
T d1y6ia1 6 TELSQQLHDASEKKQLTAIAALAEMGEGGQGILLDYLAKNVPLEKPVLAVGNVYQTL 62 (82)
T ss_dssp HHHHHHHHHSCTTTHHHHHHHHHTSHHHHHHHHHHHHHHHCSCSSCCHHHHHHHHHH
T ss_pred HHHHHHHHcCChHHHHHHHHHHHHccchhHHHHHHHHHHhCccCCCCcccchHHHHH
Confidence 367889987554456789999999888887665543 25567788889999986
No 2
>d1v9va1 a.29.10.1 (A:8-108) Microtubule-associated serine/threonine-protein kinase 3, MAST3 (KIAA0561) {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.35 E-value=40 Score=20.19 Aligned_cols=64 Identities=13% Similarity=0.156 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhCC
Q 034236 19 ERVQILYRRALKDTLNWAVHRHLFYKDADDLRLRFEANKHVTDLDAIDRMIDEAEATYNKWRHP 82 (100)
Q Consensus 19 ~~Vl~LYR~~LR~~~~~~~~r~~~r~~a~~iR~eFe~nk~vtD~~~I~~Ll~~G~~~L~~~~Hp 82 (100)
.||+.|=|.||..+++-...-.+|.....++-.-..+-+.=++++.+..+-.--++-|-.+.-|
T Consensus 36 HQiiElARDCL~KS~e~lITs~YF~Else~LekLl~ea~erSe~~~~~~i~~lvkkLL~IIsRP 99 (101)
T d1v9va1 36 HQIVELARDCLAKSGENLVTSRYFLEMQEKLERLLQDAHERSDSEEVSFIVQLVRKLLIIISRP 99 (101)
T ss_dssp HHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHhhhhcChhHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHhhcccC
Confidence 5899999999999987655444555444455555655555567776666555555555555444
No 3
>d2csba1 a.60.2.4 (A:351-409) Topoisomerase V {Methanopyrus kandleri [TaxId: 2320]}
Probab=33.06 E-value=7.1 Score=21.00 Aligned_cols=27 Identities=41% Similarity=0.656 Sum_probs=21.1
Q ss_pred HHHHHHHHhcCCC--CCHHHHHHHHHHHH
Q 034236 47 DDLRLRFEANKHV--TDLDAIDRMIDEAE 73 (100)
Q Consensus 47 ~~iR~eFe~nk~v--tD~~~I~~Ll~~G~ 73 (100)
.++-+-|+.-..+ +|.++|+.++++|.
T Consensus 18 deliehfesiagilatdleeiermyeegr 46 (59)
T d2csba1 18 DELIEHFESIAGILATDLEEIERMYEEGR 46 (59)
T ss_dssp HHHHHHHSSHHHHHTSCHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHccc
Confidence 3566777766654 89999999999885
No 4
>d2eiaa2 a.73.1.1 (A:17-147) EIAV capsid protein p26 {Equine infectious anemia virus [TaxId: 11665]}
Probab=32.56 E-value=23 Score=22.25 Aligned_cols=32 Identities=19% Similarity=0.091 Sum_probs=18.7
Q ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCcCCCCCCC
Q 034236 61 DLDAIDRMIDEAEATYNKWRHPDPYIGKCFCTG 93 (100)
Q Consensus 61 D~~~I~~Ll~~G~~~L~~~~Hp~p~~~~~~pgG 93 (100)
+.+.|+.-|++--++ +.-.||.|.-+.-.|+|
T Consensus 50 a~Qiikd~INEeAae-WDr~HP~~~gp~~~P~~ 81 (131)
T d2eiaa2 50 QKQILLDAIDKIADD-WDNRHPLPNAPLVAPPQ 81 (131)
T ss_dssp HHHHHHHHHHHHHHH-HHHHSCCTTCCSSCCSS
T ss_pred HHHHHHHHHHHHHHH-HHHcCCCCCCCCCCCCC
Confidence 455555555544444 66789988665444443
No 5
>d1nf4a_ a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Desulfovibrio desulfuricans [TaxId: 876]}
Probab=30.95 E-value=52 Score=19.90 Aligned_cols=80 Identities=19% Similarity=0.148 Sum_probs=45.3
Q ss_pred HHHhhccHHHHHHHHHHHHHHHHHhhh--hhhhHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHH-HHHHHHHhhCCCC
Q 034236 8 AAYVARRAAQKERVQILYRRALKDTLN--WAVHRHLFYKDADDLRLRFEANKHVTDLDAIDRMIDE-AEATYNKWRHPDP 84 (100)
Q Consensus 8 ~~~~~~~~~~r~~Vl~LYR~~LR~~~~--~~~~r~~~r~~a~~iR~eFe~nk~vtD~~~I~~Ll~~-G~~~L~~~~Hp~p 84 (100)
.+++......-+.|...|+.+.+.+.. .+..++.++. +-.+-+ .|+.-.+.+-.+++. |+.-|....- .|
T Consensus 86 ~e~l~~~l~~E~~~~~~y~~~~~~A~~~~D~~t~~~l~~----il~eE~--~H~~~~e~~l~~i~~~G~~yl~~~~~-~~ 158 (169)
T d1nf4a_ 86 PVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFER----IIEEEQ--AHLTYYENIGSHIKNLGDTYLAKIAG-TP 158 (169)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH----HHHHHH--HHHHHHHHHHHHHHHHTHHHHHHHTT-CC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH----HHHHHH--HHHHHHHHHHHHHHHHhHHHHHHHhC-CC
Confidence 455666667888999999999999963 3334455542 222222 244444444444444 7665554443 33
Q ss_pred CcCCCCCCCc
Q 034236 85 YIGKCFCTGS 94 (100)
Q Consensus 85 ~~~~~~pgG~ 94 (100)
-.-|..+.|+
T Consensus 159 ~~~~~~~~~~ 168 (169)
T d1nf4a_ 159 SSTGTASKGF 168 (169)
T ss_dssp CCCSSCCCCC
T ss_pred CCCCCCCCCC
Confidence 3445555554
No 6
>d1kxpd3 a.126.1.1 (D:405-473) Vitamin D binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.02 E-value=58 Score=18.10 Aligned_cols=30 Identities=13% Similarity=0.257 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHH
Q 034236 42 FYKDADDLRLRFEANKHVTDLDAIDRMIDE 71 (100)
Q Consensus 42 ~r~~a~~iR~eFe~nk~vtD~~~I~~Ll~~ 71 (100)
|-.+..++.+.|+....-..|.+++.|+++
T Consensus 11 Fte~kkkL~e~lr~k~P~as~~~l~~mVek 40 (69)
T d1kxpd3 11 FTEYKKKLAERLKAKLPDATPKELAKLVNK 40 (69)
T ss_dssp HHHHHHHHHHHHHHHCTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCCCHHHHHHHHHH
Confidence 344456899999998888889999999875
No 7
>d1ej2a_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=19.55 E-value=61 Score=18.94 Aligned_cols=35 Identities=6% Similarity=0.123 Sum_probs=23.0
Q ss_pred HHHHHHHHHHhcCCCCC---HHHHHHHHH-HHHHHHHHh
Q 034236 45 DADDLRLRFEANKHVTD---LDAIDRMID-EAEATYNKW 79 (100)
Q Consensus 45 ~a~~iR~eFe~nk~vtD---~~~I~~Ll~-~G~~~L~~~ 79 (100)
.++.||+...+++++++ +.+++.+.+ .|...+..+
T Consensus 128 SST~IR~~i~~g~~~~~lvP~~V~~~i~~~~g~~r~~~~ 166 (167)
T d1ej2a_ 128 SGTEVRRRMLDDGDWRSLLPESVVEVIDEINGVERIKHL 166 (167)
T ss_dssp SHHHHHHHHHHTCCCGGGSCHHHHHHHHHTTHHHHHHHH
T ss_pred cHHHHHHHHHcCCChhHhCCHHHHHHHHHCCcHHHHHhc
Confidence 35789999998888764 445554444 477766643
No 8
>d1vlha_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Thermotoga maritima [TaxId: 2336]}
Probab=19.41 E-value=49 Score=18.89 Aligned_cols=25 Identities=12% Similarity=0.097 Sum_probs=17.9
Q ss_pred HHHHHHHHHhcCCCCC--HHHHHHHHH
Q 034236 46 ADDLRLRFEANKHVTD--LDAIDRMID 70 (100)
Q Consensus 46 a~~iR~eFe~nk~vtD--~~~I~~Ll~ 70 (100)
++.||+....++++++ |..+...|+
T Consensus 127 ST~IR~~i~~g~~i~~lvP~~V~~yI~ 153 (157)
T d1vlha_ 127 SSLVKEVALYGGDVTEWVPPEVARALN 153 (157)
T ss_dssp HHHHHHHHHTTCCCTTTSCHHHHHHHH
T ss_pred HHHHHHHHHcCCChhHhcCHHHHHHHH
Confidence 4789999999998875 444555444
No 9
>d1gvfa_ c.1.10.2 (A:) Tagatose-1,6-bisphosphate aldolase {Escherichia coli [TaxId: 562]}
Probab=18.50 E-value=1.4e+02 Score=20.31 Aligned_cols=41 Identities=20% Similarity=0.116 Sum_probs=26.5
Q ss_pred HHHHHHHh-hhhhhhHHHHHHHHHHHHHHHHhcCCCCCHHHH
Q 034236 25 YRRALKDT-LNWAVHRHLFYKDADDLRLRFEANKHVTDLDAI 65 (100)
Q Consensus 25 YR~~LR~~-~~~~~~r~~~r~~a~~iR~eFe~nk~vtD~~~I 65 (100)
.+++.+.+ .++..+-+....+...+|+.+.+|.+..||..+
T Consensus 217 i~~ai~~Gi~KiNi~T~l~~a~~~~~~~~l~~n~~~~d~~~~ 258 (284)
T d1gvfa_ 217 VRRTIELGVTKVNVATELKIAFAGAVKAWFAENPQGNDPRYY 258 (284)
T ss_dssp HHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHCTTCCCHHHH
T ss_pred HHHHHHcCeEEEEechHHHHHHHHHHHHHHHhCCCCCCHHHH
Confidence 45566666 333333334334446789999999999998654
No 10
>d1f9aa_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=17.48 E-value=73 Score=18.37 Aligned_cols=33 Identities=18% Similarity=0.241 Sum_probs=19.9
Q ss_pred HHHHHHHHHhcCCCCC--HHHHHHHHHH--HHHHHHH
Q 034236 46 ADDLRLRFEANKHVTD--LDAIDRMIDE--AEATYNK 78 (100)
Q Consensus 46 a~~iR~eFe~nk~vtD--~~~I~~Ll~~--G~~~L~~ 78 (100)
.+.||+.-.++.++++ |..+...|++ |...+.+
T Consensus 126 ST~IR~~i~~g~~i~~~vp~~V~~~i~~~~~~~r~~~ 162 (164)
T d1f9aa_ 126 GTEIRRRMLNGEKWEHLVPKAVVDVIKEIKGVERLRK 162 (164)
T ss_dssp HHHHHHHHHHTCCCGGGSCHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHcCCChHHhCCHHHHHHHHHcCcHHHHHh
Confidence 4678888888887754 2333444443 6666554
Done!