Query 034237
Match_columns 100
No_of_seqs 148 out of 1020
Neff 7.1
Searched_HMMs 46136
Date Fri Mar 29 11:17:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034237.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/034237hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd01959 nsLTP2 nsLTP2: Non-spe 99.8 6.2E-21 1.3E-25 114.8 3.9 66 35-100 1-66 (66)
2 cd04660 nsLTP_like nsLTP_like: 99.6 5.3E-16 1.1E-20 94.6 3.7 60 39-99 7-70 (73)
3 PF14368 LTP_2: Probable lipid 99.6 3.5E-16 7.5E-21 98.6 1.5 67 31-98 18-92 (96)
4 cd01960 nsLTP1 nsLTP1: Non-spe 99.6 6.6E-16 1.4E-20 97.2 1.9 65 34-98 2-79 (89)
5 cd00010 AAI_LTSS AAI_LTSS: Alp 99.5 1.7E-14 3.8E-19 85.0 2.6 56 40-95 1-63 (63)
6 smart00499 AAI Plant lipid tra 99.1 1.3E-10 2.8E-15 69.6 3.4 60 39-98 7-75 (79)
7 PF00234 Tryp_alpha_amyl: Prot 98.9 5.9E-11 1.3E-15 74.1 -3.7 61 39-99 14-87 (90)
8 PF14547 Hydrophob_seed: Hydro 95.8 0.0034 7.3E-08 39.4 0.7 61 39-99 8-80 (85)
9 cd01958 HPS_like HPS_like: Hyd 95.3 0.019 4.2E-07 36.0 2.9 66 34-99 3-81 (85)
10 cd00261 AAI_SS AAI_SS: Alpha-A 85.9 0.28 6.1E-06 31.3 0.4 62 39-100 14-108 (110)
11 PLN00214 putative protein; Pro 55.1 11 0.00024 24.8 2.1 72 2-73 1-82 (115)
12 PF10868 DUF2667: Protein of u 50.3 7.9 0.00017 24.5 0.8 43 2-46 1-43 (90)
13 PF13956 Ibs_toxin: Toxin Ibs, 35.4 14 0.0003 16.6 0.2 13 11-23 4-16 (19)
14 PF05617 Prolamin_like: Prolam 30.2 32 0.00069 19.8 1.2 20 51-70 26-46 (70)
15 PF10731 Anophelin: Thrombin i 25.8 83 0.0018 18.5 2.4 7 11-17 5-11 (65)
16 COG3354 FlaG Putative archaeal 23.7 99 0.0022 21.4 2.8 18 2-19 1-18 (154)
No 1
>cd01959 nsLTP2 nsLTP2: Non-specific lipid-transfer protein type 2 (nsLTP2) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. nsLTP2 can bind lipids and sterols. Structure studies of rice nsLTPs show that the plasticity of the hydrophobic cavity is an important factor in ligand binding. The flexibility of the sLTP2 cavity allows its binding to rigid sterol molecules, whereas nsLTP1 cannot bind sterols despite its larger cavity size. The resulting nsLTP2/sterol complexes may bind to receptors that trigger defense responses. nsLTP2 gene exp
Probab=99.82 E-value=6.2e-21 Score=114.84 Aligned_cols=66 Identities=61% Similarity=1.392 Sum_probs=61.6
Q ss_pred CCccccccchhhhcCCCCCchhHHHhcccccccccccccCcccccCCCHHHHHHhhcccCCCCCCC
Q 034237 35 CSPTELSPCLAALTSSAPPSGACCNKLRQQRPCLCGYLRNPNLRQYVNSPNAKRIVATCGIPYPRC 100 (100)
Q Consensus 35 C~~~~L~pC~~~v~~~~~Ps~~CC~~vk~~~~ClC~~l~~~~~~~~i~~~~a~~Lp~~Cgv~~p~C 100 (100)
|+..+|.+|++|++++.+||++||+.+|++++|||+|++++.+..+||.++|++||++||+++|+|
T Consensus 1 c~~~~L~~C~~ai~~~~~Ps~~CC~~Lk~~~~CLC~y~~~p~l~~~i~~~~A~~l~~~Cgv~~P~C 66 (66)
T cd01959 1 CNPTQLSPCLPAILGGSPPSAACCAKLKEQQSCLCQYAKNPSLKQYVNSPNARKVLAACGVPYPNC 66 (66)
T ss_pred CChhhcccCHHHHhCCCCCCHHHHHHHhcCCCCeeeeecCccHHhhcCcHHHHHHHHHcCCCCCCC
Confidence 555689999999998889999999999999999999999998877899999999999999999998
No 2
>cd04660 nsLTP_like nsLTP_like: Non-specific lipid-transfer protein (nsLTP)-like subfamily; composed of predominantly uncharacterized proteins with similarity to nsLTPs, including Medicago truncatula MtN5, the root-specific Phaseolus vulgaris PVR3, Antirrhinum majus FIL1, and Lilium longiflorum LIM3. Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. The MtN5 gene is induced during root nodule development. FIL1 is thought to be important in petal and stamen formation. The LIM3 gene is induced during the early prophase stage of meiosis in lily microsporocytes.
Probab=99.61 E-value=5.3e-16 Score=94.65 Aligned_cols=60 Identities=37% Similarity=0.804 Sum_probs=51.6
Q ss_pred ccccchhhhcCCC---CCchhHHHhcccc-cccccccccCcccccCCCHHHHHHhhcccCCCCCC
Q 034237 39 ELSPCLAALTSSA---PPSGACCNKLRQQ-RPCLCGYLRNPNLRQYVNSPNAKRIVATCGIPYPR 99 (100)
Q Consensus 39 ~L~pC~~~v~~~~---~Ps~~CC~~vk~~-~~ClC~~l~~~~~~~~i~~~~a~~Lp~~Cgv~~p~ 99 (100)
.|.||++|+++++ +||.+||+++|+. ++|+|.+++...+. +||.++|.+||++||+++|+
T Consensus 7 ~L~~C~~yl~~~~~~~~Ps~~CC~~vk~~~~~C~C~~~~~~~~~-~i~~~~a~~Lp~~Cgv~~p~ 70 (73)
T cd04660 7 LLAECQPYVTGPNPPPPPSRECCAALRRADLPCLCRYKTSLVLQ-IIDPDKAVYLPAKCGLPLPP 70 (73)
T ss_pred HHHHHHHHHcCCCCCCCCCHHHHHHHHcCCcCCEeeccCCCccc-ccCHHHHHHHHHHcCCCCCC
Confidence 6889999999754 5899999999987 58999998865333 59999999999999999883
No 3
>PF14368 LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A 1TUK_A.
Probab=99.59 E-value=3.5e-16 Score=98.55 Aligned_cols=67 Identities=37% Similarity=0.817 Sum_probs=48.7
Q ss_pred ccCCCCccccccc---hhhhcCCCCCchhHHHhcccc----cccccccccCcc-cccCCCHHHHHHhhcccCCCCC
Q 034237 31 EAVTCSPTELSPC---LAALTSSAPPSGACCNKLRQQ----RPCLCGYLRNPN-LRQYVNSPNAKRIVATCGIPYP 98 (100)
Q Consensus 31 ~~~~C~~~~L~pC---~~~v~~~~~Ps~~CC~~vk~~----~~ClC~~l~~~~-~~~~i~~~~a~~Lp~~Cgv~~p 98 (100)
...+|. .+|.|| ..|++++..||++||+++|+. +.|+|++++++. ...+||.+++..||++||++.|
T Consensus 18 ~~~~c~-~~l~~c~~~~~~~~~~~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~~~~~~in~~~a~~Lp~~Cg~~~~ 92 (96)
T PF14368_consen 18 CCCSCA-NSLLPCCPCLCYVTGGPAPSAACCSALKSVVQADPPCLCQLLNSPGAPGFGINVTRALALPAACGVPVP 92 (96)
T ss_dssp BTTB-H-CCCCHH--HHHHHCC-----HHHHHHHCC----HCCHHHCCCC-CCHCHHCCTCHHHHHHHHHCTSS-S
T ss_pred CcchhH-HHHhccccchhccCCCCCCCHHHHHHHHHhccCCCCCHHHhcCccccccCCcCHHHHHHHHHHcCCCCC
Confidence 334563 357777 788887779999999999994 799999999887 3458999999999999999987
No 4
>cd01960 nsLTP1 nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans.
Probab=99.57 E-value=6.6e-16 Score=97.16 Aligned_cols=65 Identities=31% Similarity=0.676 Sum_probs=55.1
Q ss_pred CCCcc--ccccchhhhcCC-CCCchhHHHhcccc---------cccccccccCccccc-CCCHHHHHHhhcccCCCCC
Q 034237 34 TCSPT--ELSPCLAALTSS-APPSGACCNKLRQQ---------RPCLCGYLRNPNLRQ-YVNSPNAKRIVATCGIPYP 98 (100)
Q Consensus 34 ~C~~~--~L~pC~~~v~~~-~~Ps~~CC~~vk~~---------~~ClC~~l~~~~~~~-~i~~~~a~~Lp~~Cgv~~p 98 (100)
+|..+ .|.||++|++++ ..|+++||++++++ ++|+|.++++..... +||.++|.+||++||+++|
T Consensus 2 ~C~~v~~~l~~C~~y~~g~~~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~C~~~~~~~~~~i~~~~a~~LP~~C~v~~~ 79 (89)
T cd01960 2 SCGQVTSLLAPCLGYLTGGGPAPSPACCSGVKSLNGLAKTTADRQAACNCLKSAAAGISGLNPGRAAGLPGKCGVSIP 79 (89)
T ss_pred CHHHHHhhHHhHHHHHhCCCCCCChHHhhhhHHHhhccCCCCchhhhhhcccccccccCCCCHHHHHhChHhcccCCC
Confidence 56665 789999999985 48999999999985 379999998765555 4999999999999999865
No 5
>cd00010 AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins. Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges.
Probab=99.48 E-value=1.7e-14 Score=84.99 Aligned_cols=56 Identities=36% Similarity=0.790 Sum_probs=48.8
Q ss_pred cccchhhhcCC-CCCchhHHHhcccc----cccccccccCccccc-CC-CHHHHHHhhcccCC
Q 034237 40 LSPCLAALTSS-APPSGACCNKLRQQ----RPCLCGYLRNPNLRQ-YV-NSPNAKRIVATCGI 95 (100)
Q Consensus 40 L~pC~~~v~~~-~~Ps~~CC~~vk~~----~~ClC~~l~~~~~~~-~i-~~~~a~~Lp~~Cgv 95 (100)
|.||++|++++ ..||++||++++++ +.|+|++++++.... ++ |.+++..||++||+
T Consensus 1 L~~C~~y~~~~~~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~~~~~~~~~~~~a~~LP~~Cgv 63 (63)
T cd00010 1 LAPCLSYLTGGATAPPSDCCSGLKSVVKSDPKCLCAALNGPGASLLGLKNATRALALPAACGL 63 (63)
T ss_pred CcchHHHHcCCCCCCChHHHHHHHHHHhcChhhHHHHHcCccccccCcccHHHHHhchHhcCC
Confidence 67999999986 58999999999997 589999999876543 45 79999999999996
No 6
>smart00499 AAI Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family.
Probab=99.07 E-value=1.3e-10 Score=69.58 Aligned_cols=60 Identities=45% Similarity=0.871 Sum_probs=50.7
Q ss_pred ccccchhhhcCC---CCCchhHHHhcccc--cccccccccCcccccC----CCHHHHHHhhcccCCCCC
Q 034237 39 ELSPCLAALTSS---APPSGACCNKLRQQ--RPCLCGYLRNPNLRQY----VNSPNAKRIVATCGIPYP 98 (100)
Q Consensus 39 ~L~pC~~~v~~~---~~Ps~~CC~~vk~~--~~ClC~~l~~~~~~~~----i~~~~a~~Lp~~Cgv~~p 98 (100)
.+.+|.+|++++ ..|+.+||++++++ ..|+|..++....... ++..++..||+.||+..+
T Consensus 7 ~~~~c~~~~~~~~~~~~p~~~CC~~l~~~~~~~C~C~~~~~~~~~~~~~~~~~~~~a~~lp~~C~~~~~ 75 (79)
T smart00499 7 QLAPCLSYLTGGSPGAPPSQQCCSQLRGLNSAQCRCLALRAAVLGILEIPGVNAQNAASLPSACGVPPP 75 (79)
T ss_pred hHHhhHHHHcCCCCCCCCchHHHHHHHHhcccCCcchhhhcccccccchhhhhHHHHHhhHHhcCCCCC
Confidence 456999999975 47889999999999 5899999886544432 599999999999999987
No 7
>PF00234 Tryp_alpha_amyl: Protease inhibitor/seed storage/LTP family This is a small subfamily; InterPro: IPR003612 This domain is found is several proteins, including plant lipid transfer proteins [], seed storage proteins [] and trypsin-alpha amylase inhibitors [, ]. The domain forms a four-helical bundle in a right-handed superhelix with a folded leaf topology, which is stabilised by disulphide bonds, and which has an internal cavity. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; PDB: 1BFA_A 1BEA_A 1MID_A 1BE2_A 1LIP_A 3GSH_A 1JTB_A 1UVC_B 1BV2_A 1UVB_A ....
Probab=98.86 E-value=5.9e-11 Score=74.10 Aligned_cols=61 Identities=31% Similarity=0.648 Sum_probs=52.6
Q ss_pred ccccchhhhcCC-CCCchhHHHhcccc-cccccccccCcccc-----------cCCCHHHHHHhhcccCCCCCC
Q 034237 39 ELSPCLAALTSS-APPSGACCNKLRQQ-RPCLCGYLRNPNLR-----------QYVNSPNAKRIVATCGIPYPR 99 (100)
Q Consensus 39 ~L~pC~~~v~~~-~~Ps~~CC~~vk~~-~~ClC~~l~~~~~~-----------~~i~~~~a~~Lp~~Cgv~~p~ 99 (100)
.+.+|.+|++++ ..|+..||++|+++ +.|.|..++..... .+++..+|..||+.||+++|.
T Consensus 14 ~l~~c~~~~~~~~~~~~~~CC~~L~~l~~~C~C~~i~~~~~~~~~q~~~~~~~~~~~~~~a~~LP~~C~v~~~~ 87 (90)
T PF00234_consen 14 RLSPCLPYLQGGCQQPSQQCCQQLRQLDPQCRCEAIRQMVRQVIQQQQQGGQEMQIMAQRAQNLPSMCNVSPPY 87 (90)
T ss_dssp HHHGGHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHCTSTCSHHHHHHHHHHHHHHHHTTSSSSS
T ss_pred cccccHHHHhcccccchHHHhHHHHHHhHHhhCHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHCCCCCCC
Confidence 688999999985 47999999999998 68999999865333 268999999999999999886
No 8
>PF14547 Hydrophob_seed: Hydrophobic seed protein
Probab=95.81 E-value=0.0034 Score=39.44 Aligned_cols=61 Identities=28% Similarity=0.609 Sum_probs=43.7
Q ss_pred ccccchhhhc-----CCCCCchhHHHhcccc-----cccccccccCcccc-cCCCHH-HHHHhhcccCCCCCC
Q 034237 39 ELSPCLAALT-----SSAPPSGACCNKLRQQ-----RPCLCGYLRNPNLR-QYVNSP-NAKRIVATCGIPYPR 99 (100)
Q Consensus 39 ~L~pC~~~v~-----~~~~Ps~~CC~~vk~~-----~~ClC~~l~~~~~~-~~i~~~-~a~~Lp~~Cgv~~p~ 99 (100)
+|.-|.+.+. .+.++...||.-++++ ..|+|..+|...+. ..+|.. ....|-..||...|.
T Consensus 8 kLgvC~~vL~l~~~~~g~~~~~~CC~li~gL~d~~AA~CLC~aika~vlg~i~~~ipv~l~~lln~CGk~~p~ 80 (85)
T PF14547_consen 8 KLGVCANVLGLVNLVIGNPPRQPCCSLIAGLADLDAAVCLCTAIKANVLGLINVNIPVALNLLLNACGKTVPS 80 (85)
T ss_pred hhhhhhhhhhhhccccCCCCCCCcChHHhCcccchHHHHHHHHHhhhcccccccccccHHHHHHHHhCCcCcC
Confidence 6778888772 1346788999999997 47999999865555 344433 344577889998773
No 9
>cd01958 HPS_like HPS_like: Hydrophobic Protein from Soybean (HPS)-like subfamily; composed of proteins with similarity to HPS, a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins. In addition to HPS, members of this subfamily include a hybrid proline-rich protein (HyPRP) from maize, a dark-inducible protein (LeDI-2) from Lithospermum erythrorhizon, maize ZRP3 protein, and rice RcC3 protein. HyPRP is an embryo-specific protein that contains an N-terminal proline-rich domain and a C-terminal HPS-like cysteine-rich domain. It has been suggested that HyPRP may be involved in the stability and defense of the developing embryo. LeDI-2 is a root-specific protein that may be involved in regulating the biosynthesis of shikonin derivatives in L. erythrorhizon. Maize ZRP3 and rice RcC3 are root-specific proteins whose functions are yet to be determined. It has been reported that ZRP3 largely accumulates in a distinct subset
Probab=95.32 E-value=0.019 Score=36.02 Aligned_cols=66 Identities=27% Similarity=0.573 Sum_probs=45.9
Q ss_pred CCCcc--ccccchhhhcC-----CCCCchhHHHhcccc-----cccccccccCcccccCCCHHHHHH-hhcccCCCCCC
Q 034237 34 TCSPT--ELSPCLAALTS-----SAPPSGACCNKLRQQ-----RPCLCGYLRNPNLRQYVNSPNAKR-IVATCGIPYPR 99 (100)
Q Consensus 34 ~C~~~--~L~pC~~~v~~-----~~~Ps~~CC~~vk~~-----~~ClC~~l~~~~~~~~i~~~~a~~-Lp~~Cgv~~p~ 99 (100)
.|..+ +|.-|..-+.. +.+|...||.-++++ ..|+|..+|...+...+|.....+ |-..||...|.
T Consensus 3 ~CP~dalkLgvCanvL~l~~~~~g~~~~~~CC~ll~GL~dldAA~CLCtaikan~lgi~~~~pv~l~llln~CGk~~P~ 81 (85)
T cd01958 3 TCPRDALKLGVCANVLGLSLLLLGTPAVQPCCPLIGGLADLDAAVCLCTAIKANILGISINIPVALSLLLNSCGRNVPP 81 (85)
T ss_pred CCCcchHHhchhHhhhhccccccCCCccchHHHHHcCchhhheeeeeeeeeeccccCcccccChhHHHHHHHHcCcCCC
Confidence 45544 67778876632 347778999999997 579999999765555444444444 55679988773
No 10
>cd00261 AAI_SS AAI_SS: Alpha-Amylase Inhibitors (AAIs) and Seed Storage (SS) Protein subfamily; composed of cereal-type AAIs and SS proteins. They are mainly present in the seeds of a variety of plants. AAIs play an important role in the natural defenses of plants against insects and pathogens such as fungi, bacteria and viruses. AAIs impede the digestion of plant starch and proteins by inhibiting digestive alpha-amylases and proteinases. Also included in this subfamily are SS proteins such as 2S albumin, gamma-gliadin, napin, and prolamin. These AAIs and SS proteins are also known allergens in humans.
Probab=85.86 E-value=0.28 Score=31.26 Aligned_cols=62 Identities=26% Similarity=0.485 Sum_probs=41.9
Q ss_pred ccccchhhhcCC----CC-----------CchhHHHhcccc-cccccccccCccc----c--------c----CCCHHHH
Q 034237 39 ELSPCLAALTSS----AP-----------PSGACCNKLRQQ-RPCLCGYLRNPNL----R--------Q----YVNSPNA 86 (100)
Q Consensus 39 ~L~pC~~~v~~~----~~-----------Ps~~CC~~vk~~-~~ClC~~l~~~~~----~--------~----~i~~~~a 86 (100)
.|.+|..|+... +. ....||.-++.. ..|-|.-|....- . . ..-...|
T Consensus 14 ~L~~C~~yl~qq~~~~~~~~~~~~~~~~~~~qqCCqqL~~i~~qcrC~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 93 (110)
T cd00261 14 PLNSCREYLRQQCSGVGGPPVWPQQSCEVLRQQCCQQLAQIPEQCRCEALRQMVQGVIQQQQQQQEQQQGQEVERMRQAA 93 (110)
T ss_pred cCcHHHHHHHHhccCCCCCCCcCccccHHHHHHHHHHHHhCcHhhhHHHHHHHHHHHHHhhhccccccCcChHHHHHHHH
Confidence 578899987521 11 235799999998 5899988864210 0 0 1234578
Q ss_pred HHhhcccCCCC-CCC
Q 034237 87 KRIVATCGIPY-PRC 100 (100)
Q Consensus 87 ~~Lp~~Cgv~~-p~C 100 (100)
.+||+.||+.. +.|
T Consensus 94 ~~Lp~~C~~~~~~~C 108 (110)
T cd00261 94 QNLPSMCNLYPPPYC 108 (110)
T ss_pred HhhchhcCCCCCCCC
Confidence 99999999987 555
No 11
>PLN00214 putative protein; Provisional
Probab=55.07 E-value=11 Score=24.85 Aligned_cols=72 Identities=21% Similarity=0.358 Sum_probs=36.7
Q ss_pred CcccchHHHHHHHHHHHHHHHhhhhh--hhhcc---CCCCccccccchhhhc----CCCCCchhHHHhcccc-ccccccc
Q 034237 2 MQRVSSVEAVRFVMVVLVAVAALSQV--HVAEA---VTCSPTELSPCLAALT----SSAPPSGACCNKLRQQ-RPCLCGY 71 (100)
Q Consensus 2 m~~~~~~~~l~~~~~v~~~~~~~~~~--~a~~~---~~C~~~~L~pC~~~v~----~~~~Ps~~CC~~vk~~-~~ClC~~ 71 (100)
|++-.+.++.+|+++.++-+.+|+-+ -+++. .+|....-.-|..-+. .++++|..||..+-+. +.|-=.+
T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~C~~Kmt~KCa~EI~a~i~~N~t~s~~CC~~LVk~GK~CH~~L 80 (115)
T PLN00214 1 MSKFSSQITTLFIVVALVCAFVPVFSVEEAEAKSLWNTCLVKITPKCALDIIAVVFENGTLIDPCCNDLVKEGKVCHDTL 80 (115)
T ss_pred CCccccchhHHHHHHHHHHhcccccchhhhHHHHHHHHHHhhccHhhHHHHHHHHHcCCCCchHHHHHHHHHhhHHHHHH
Confidence 45544444455555544433444321 12222 2455221234776443 3567899999986654 4555444
Q ss_pred cc
Q 034237 72 LR 73 (100)
Q Consensus 72 l~ 73 (100)
++
T Consensus 81 iK 82 (115)
T PLN00214 81 IK 82 (115)
T ss_pred HH
Confidence 43
No 12
>PF10868 DUF2667: Protein of unknown function (DUF2667); InterPro: IPR022618 This family of proteins with unknown function appears to be restricted to Arabidopsis thaliana.
Probab=50.29 E-value=7.9 Score=24.54 Aligned_cols=43 Identities=16% Similarity=0.357 Sum_probs=17.8
Q ss_pred CcccchHHHHHHHHHHHHHHHhhhhhhhhccCCCCccccccchhh
Q 034237 2 MQRVSSVEAVRFVMVVLVAVAALSQVHVAEAVTCSPTELSPCLAA 46 (100)
Q Consensus 2 m~~~~~~~~l~~~~~v~~~~~~~~~~~a~~~~~C~~~~L~pC~~~ 46 (100)
|+|....+ +++++++.+.+++..+.-.++...|+ ..+.+|.+|
T Consensus 1 m~slk~st-~~ilvvvclsiLLisp~eV~G~~~cd-~~~G~C~~~ 43 (90)
T PF10868_consen 1 MGSLKLST-FVILVVVCLSILLISPTEVDGRLKCD-SPFGACTPF 43 (90)
T ss_pred CCceEEEe-eehhHHHHHHHHccccceeCCeEccC-cccccCCch
Confidence 45544322 22323333332332332344444465 345556555
No 13
>PF13956 Ibs_toxin: Toxin Ibs, type I toxin-antitoxin system
Probab=35.43 E-value=14 Score=16.64 Aligned_cols=13 Identities=23% Similarity=0.513 Sum_probs=5.3
Q ss_pred HHHHHHHHHHHHh
Q 034237 11 VRFVMVVLVAVAA 23 (100)
Q Consensus 11 l~~~~~v~~~~~~ 23 (100)
++.++++++++++
T Consensus 4 ~vIIlvvLLliSf 16 (19)
T PF13956_consen 4 LVIILVVLLLISF 16 (19)
T ss_pred ehHHHHHHHhccc
Confidence 3344444443333
No 14
>PF05617 Prolamin_like: Prolamin-like; InterPro: IPR008502 This entry consists of several proteins of unknown function found exclusively in Arabidopsis thaliana.
Probab=30.23 E-value=32 Score=19.83 Aligned_cols=20 Identities=15% Similarity=0.516 Sum_probs=16.3
Q ss_pred CCCchhHHHhcccc-cccccc
Q 034237 51 APPSGACCNKLRQQ-RPCLCG 70 (100)
Q Consensus 51 ~~Ps~~CC~~vk~~-~~ClC~ 70 (100)
...+++||.++.+. +.|.=.
T Consensus 26 ~~i~~~CC~~i~~~g~~C~~~ 46 (70)
T PF05617_consen 26 KNIGPECCKAINKMGKDCHPA 46 (70)
T ss_pred CCCChHHHHHHHHHhHhHHHH
Confidence 48999999999997 577655
No 15
>PF10731 Anophelin: Thrombin inhibitor from mosquito; InterPro: IPR018932 Members of this family are all inhibitors of thrombin, the peptidase that is at the end of the blood coagulation cascade and which creates the clot by cleaving fibrinogen. The interaction between thrombin and fibrinogen involves two different areas of contact - via the thrombin active site and via a second substrate-binding site known as an exosite. The inhibitor acts by blocking the exosite, rather than by interacting with the active site. The inhibitors are from mosquitoes that feed on human blood and which, by inhibiting thrombin, prevent the blood from clotting and keep it flowing.
Probab=25.76 E-value=83 Score=18.55 Aligned_cols=7 Identities=0% Similarity=0.263 Sum_probs=3.1
Q ss_pred HHHHHHH
Q 034237 11 VRFVMVV 17 (100)
Q Consensus 11 l~~~~~v 17 (100)
|+++.|+
T Consensus 5 l~vialL 11 (65)
T PF10731_consen 5 LIVIALL 11 (65)
T ss_pred hhHHHHH
Confidence 4444444
No 16
>COG3354 FlaG Putative archaeal flagellar protein G [Cell motility and secretion]
Probab=23.71 E-value=99 Score=21.40 Aligned_cols=18 Identities=39% Similarity=0.595 Sum_probs=9.4
Q ss_pred CcccchHHHHHHHHHHHH
Q 034237 2 MQRVSSVEAVRFVMVVLV 19 (100)
Q Consensus 2 m~~~~~~~~l~~~~~v~~ 19 (100)
||++++..-++|++.+++
T Consensus 1 mAs~a~SeLV~FIaalLi 18 (154)
T COG3354 1 MASVASSELVMFIAALLI 18 (154)
T ss_pred CCccchhHHHHHHHHHHH
Confidence 777776542334443333
Done!