Query 034237
Match_columns 100
No_of_seqs 148 out of 1020
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 19:20:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034237.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034237hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n89_A Lipid transfer protein; 99.8 5.1E-22 1.7E-26 118.9 1.4 67 34-100 1-67 (67)
2 1l6h_A LTP2, non-specific lipi 99.8 5.7E-22 1.9E-26 119.3 -0.6 67 34-100 2-68 (69)
3 2rkn_A DIR1 protein, AT5G48485 99.7 3.2E-19 1.1E-23 109.0 1.6 69 32-100 2-77 (77)
4 2ljo_A Non-specific lipid-tran 99.7 2.1E-19 7.1E-24 113.7 -0.5 67 32-98 1-79 (93)
5 2alg_A Non-specific lipid tran 99.6 4.6E-17 1.6E-21 102.6 -0.9 65 33-98 2-79 (92)
6 1siy_A LTP 1, NS-LTP1, nonspec 99.6 1.5E-16 5.3E-21 100.0 0.8 64 33-98 1-78 (91)
7 1bwo_A NS-LTP1, nonspecific li 99.6 1.2E-16 4.2E-21 100.3 -0.8 63 34-98 2-78 (90)
8 1afh_A Maize nonspecific lipid 99.6 2.8E-16 9.7E-21 99.1 0.0 65 32-98 1-80 (93)
9 1t12_A LTP 1, nonspecific lipi 99.5 4.1E-16 1.4E-20 98.1 -1.5 63 33-98 2-78 (91)
10 1hyp_A Hydrophobic protein fro 95.2 0.01 3.6E-07 35.9 2.2 61 34-99 7-73 (80)
11 3ob4_A Conglutin, maltose ABC 93.8 0.0038 1.3E-07 47.9 -2.6 45 55-100 429-488 (500)
12 1s6d_A Albumin 8; all helix, f 91.1 0.14 4.8E-06 32.1 2.6 61 40-100 21-101 (103)
13 1sm7_A Recombinant IB pronapin 91.1 0.031 1.1E-06 35.3 -0.5 62 39-100 14-104 (109)
14 2ds2_B Sweet protein mabinlin- 90.8 0.034 1.2E-06 32.8 -0.5 47 54-100 7-67 (72)
15 1pnb_B Napin BNIB; napin IA an 86.7 0.045 1.5E-06 32.5 -2.0 49 52-100 9-70 (75)
16 1psy_A 2S albumin, RICC3; albu 84.2 0.13 4.4E-06 33.4 -0.9 57 39-95 26-116 (125)
17 1w2q_A Conglutin, ARA H 6; all 83.2 0.24 8E-06 32.3 0.1 59 39-97 24-113 (127)
18 1hss_A 0.19 alpha-amylase inhi 81.4 0.16 5.4E-06 33.1 -1.3 60 39-98 16-104 (124)
19 1bea_A Bifunctional amylase/se 75.3 0.82 2.8E-05 29.7 0.7 60 39-98 16-109 (127)
20 2lvf_A 2S albumin; allergen, c 60.2 3.9 0.00013 25.8 1.5 62 39-100 17-105 (114)
21 1b1u_A Protein (alpha-amylase/ 27.8 20 0.00068 22.9 0.9 61 39-99 16-109 (122)
No 1
>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*
Probab=99.83 E-value=5.1e-22 Score=118.90 Aligned_cols=67 Identities=40% Similarity=1.023 Sum_probs=62.0
Q ss_pred CCCccccccchhhhcCCCCCchhHHHhcccccccccccccCcccccCCCHHHHHHhhcccCCCCCCC
Q 034237 34 TCSPTELSPCLAALTSSAPPSGACCNKLRQQRPCLCGYLRNPNLRQYVNSPNAKRIVATCGIPYPRC 100 (100)
Q Consensus 34 ~C~~~~L~pC~~~v~~~~~Ps~~CC~~vk~~~~ClC~~l~~~~~~~~i~~~~a~~Lp~~Cgv~~p~C 100 (100)
+|+...|.||++|++++++||++||++||++..|+|+|++++.+..+||.++|.+||++||+++|+|
T Consensus 1 ~C~~~~L~pC~~~v~~~~~Ps~~CC~~lk~~~~ClC~~~k~~~~~~~in~~~A~~Lp~~Cgv~~P~C 67 (67)
T 1n89_A 1 ACQASQLAVCASAILSGAKPSGECCGNLRAQQGCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVPHC 67 (67)
T ss_dssp CCCSSTTHHHHHHHTTCCCCCHHHHHHHHHHSSHHHHGGGCSTTHHHHTCHHHHHHHHHHTSCCSCC
T ss_pred CCChhhcccCHHHHcCCCCCCHHHHHhhCCCCCCCCccccCcccccccCHHHHHHHHHHcCCCCCCC
Confidence 4776789999999998889999999999999999999999987766799999999999999999998
No 2
>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1
Probab=99.82 E-value=5.7e-22 Score=119.31 Aligned_cols=67 Identities=42% Similarity=1.023 Sum_probs=62.4
Q ss_pred CCCccccccchhhhcCCCCCchhHHHhcccccccccccccCcccccCCCHHHHHHhhcccCCCCCCC
Q 034237 34 TCSPTELSPCLAALTSSAPPSGACCNKLRQQRPCLCGYLRNPNLRQYVNSPNAKRIVATCGIPYPRC 100 (100)
Q Consensus 34 ~C~~~~L~pC~~~v~~~~~Ps~~CC~~vk~~~~ClC~~l~~~~~~~~i~~~~a~~Lp~~Cgv~~p~C 100 (100)
+|+...|.||++|++++.+||++||++||++..|+|+|++++.+..+||.++|.+||++||+++|+|
T Consensus 2 ~C~~~~L~pC~~~v~~~~~Ps~~CC~~lk~~~~ClC~~~k~~~~~~~in~~~A~~Lp~~Cgv~~P~C 68 (69)
T 1l6h_A 2 GCNAGQLTVCTGAIAGGARPTAACCSSLRAQQGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALPTC 68 (69)
T ss_dssp CSTTTTHHHHHHHHTTCCSTTHHHHHHHHHHHHHHHHHTTCSSHHHHTTTTTGGGCCCCCSSCSCCC
T ss_pred CCChhhcccCHHHHcCCCCCCHHHHHhhCCCCCCCCccccCcccccccCHHHHHHHHHHcCCCCCCC
Confidence 5887799999999998888999999999999999999999987766899999999999999999998
No 3
>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}
Probab=99.74 E-value=3.2e-19 Score=109.01 Aligned_cols=69 Identities=32% Similarity=0.714 Sum_probs=60.0
Q ss_pred cCCCCcc--ccccchhhhcCC--CCCchhHHHhccc-ccccccccccCccccc-CCCHHHHHHhhcccCCCCC-CC
Q 034237 32 AVTCSPT--ELSPCLAALTSS--APPSGACCNKLRQ-QRPCLCGYLRNPNLRQ-YVNSPNAKRIVATCGIPYP-RC 100 (100)
Q Consensus 32 ~~~C~~~--~L~pC~~~v~~~--~~Ps~~CC~~vk~-~~~ClC~~l~~~~~~~-~i~~~~a~~Lp~~Cgv~~p-~C 100 (100)
..+|+++ .|.||++|++++ ..||++||+++|+ .+.|+|.+++++.+.. +||.++|.+||++||+++| +|
T Consensus 2 ~~~C~~~~~~L~pC~~yv~~~~~~~Ps~~CC~~lk~~~~~ClC~~~~~~~~~~~gin~~~A~~LP~~Cgv~~p~~C 77 (77)
T 2rkn_A 2 IDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQHADFACLCGYKNSPWLGSFGVDPELASALPKQCGLANAPTC 77 (77)
T ss_dssp CCBTTBCHHHHHHHGGGGBSSSCCCCCHHHHHHHTTCCHHHHHTTTTCHHHHHHTBCHHHHHHHHHHTTCSCCCCC
T ss_pred cchHHhHHHhHhhCHHHHcCCCCCCCCHHHHHHHHhcCcCCcCcccCCcchhhcCcCHHHHHHHHHHcCCCCCCCC
Confidence 4679887 799999999974 5899999999996 6899999998764443 7999999999999999998 77
No 4
>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}
Probab=99.73 E-value=2.1e-19 Score=113.74 Aligned_cols=67 Identities=33% Similarity=0.729 Sum_probs=58.8
Q ss_pred cCCCCcc--ccccchhhhcCCCCCchhHHHhcccc---------cccccccccCcccc-cCCCHHHHHHhhcccCCCCC
Q 034237 32 AVTCSPT--ELSPCLAALTSSAPPSGACCNKLRQQ---------RPCLCGYLRNPNLR-QYVNSPNAKRIVATCGIPYP 98 (100)
Q Consensus 32 ~~~C~~~--~L~pC~~~v~~~~~Ps~~CC~~vk~~---------~~ClC~~l~~~~~~-~~i~~~~a~~Lp~~Cgv~~p 98 (100)
+++|+++ .|.||++|+++++.|++.||+++|++ ++|+|+++|+.... .+||.++|..||++||+++|
T Consensus 1 AisC~~v~~~L~pCl~Yv~g~~~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~~~~~in~~~a~~LP~~CgV~~p 79 (93)
T 2ljo_A 1 AISCGAVTSDLSPCLTYLTGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIP 79 (93)
T ss_dssp CCSSHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGGGCTTCCHHHHHHHHHHHTCCCS
T ss_pred CCCHHHHHHHHHhHHHHHcCCCCCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhhccCCcCHHHHHhhhHhcCCCCC
Confidence 4689887 79999999998878999999999986 58999999975443 37999999999999999887
No 5
>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*
Probab=99.60 E-value=4.6e-17 Score=102.56 Aligned_cols=65 Identities=29% Similarity=0.657 Sum_probs=54.0
Q ss_pred CCCCcc--ccccchhhhcCCCCCchhHHHhcccc-----------cccccccccCcccccCCCHHHHHHhhcccCCCCC
Q 034237 33 VTCSPT--ELSPCLAALTSSAPPSGACCNKLRQQ-----------RPCLCGYLRNPNLRQYVNSPNAKRIVATCGIPYP 98 (100)
Q Consensus 33 ~~C~~~--~L~pC~~~v~~~~~Ps~~CC~~vk~~-----------~~ClC~~l~~~~~~~~i~~~~a~~Lp~~Cgv~~p 98 (100)
++|+++ .|.||++|++++++|+++||+++|++ ..|+|.+...+.+. +||.++|.+||++||+++|
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~~~~~~~-~in~~~A~~LP~~Cgv~~p 79 (92)
T 2alg_A 2 ITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVP-GVNPNNAAALPGKCGVSIP 79 (92)
T ss_dssp CCHHHHHHHHGGGHHHHHHCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHST-TCCHHHHHHHHHHTTCCCS
T ss_pred CChHHHHHhccCcHHHHcCCCCCCHHHHHHHHHHHhhhcccCCCCcCCccccCcccccC-ccChHHHHHHHHHcCCCCC
Confidence 578876 79999999998777999999999984 36999754433344 8999999999999999876
No 6
>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}
Probab=99.59 E-value=1.5e-16 Score=99.96 Aligned_cols=64 Identities=27% Similarity=0.640 Sum_probs=52.2
Q ss_pred CCCCcc--ccccchhhhcCCCCCchhHHHhcccc---------c--ccccccccCccccc-CCCHHHHHHhhcccCCCCC
Q 034237 33 VTCSPT--ELSPCLAALTSSAPPSGACCNKLRQQ---------R--PCLCGYLRNPNLRQ-YVNSPNAKRIVATCGIPYP 98 (100)
Q Consensus 33 ~~C~~~--~L~pC~~~v~~~~~Ps~~CC~~vk~~---------~--~ClC~~l~~~~~~~-~i~~~~a~~Lp~~Cgv~~p 98 (100)
++|+++ .|.||++|++++++|+++||+++|++ + .|+| +++..... +||.++|.+||++||+++|
T Consensus 1 i~C~~v~~~L~pCl~yv~~~~~Ps~~CC~~lk~l~~~a~t~~d~~~~ClC--~k~~~~~~~~in~~~A~~LP~~Cgv~~p 78 (91)
T 1siy_A 1 MTCGQVQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSC--LKAAAGAVRGINPNNAEALPGKCGVNIP 78 (91)
T ss_dssp CCTTTTHHHHHHHHHHHTSCSCCCHHHHHHHHHHHTTTCSSHHHHHHHHH--HHHHTTCCSSCCHHHHHHHHHHHTCCCS
T ss_pred CCHHHHHHhccCcHHHHhCCCCCcHHHHHHHHHHHhhhccCCCCCcCCcc--cCCcccccCCcCHHHHHHHHHHcCCCCC
Confidence 468887 79999999998767999999999995 2 4666 56543333 7999999999999999876
No 7
>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*
Probab=99.57 E-value=1.2e-16 Score=100.25 Aligned_cols=63 Identities=30% Similarity=0.735 Sum_probs=51.7
Q ss_pred CCCcc--ccccchhhhcCCCCCchhHHHhcccc-----------cccccccccCccccc-CCCHHHHHHhhcccCCCCC
Q 034237 34 TCSPT--ELSPCLAALTSSAPPSGACCNKLRQQ-----------RPCLCGYLRNPNLRQ-YVNSPNAKRIVATCGIPYP 98 (100)
Q Consensus 34 ~C~~~--~L~pC~~~v~~~~~Ps~~CC~~vk~~-----------~~ClC~~l~~~~~~~-~i~~~~a~~Lp~~Cgv~~p 98 (100)
+|+++ .|.||++|++++++|+++||+++|++ ..|+| +++..... +||.++|.+||++||+++|
T Consensus 2 ~C~~v~~~L~pCl~y~~~~~~Ps~~CC~~lk~l~~~a~t~~dr~~~ClC--lk~~~~~~~~in~~~A~~LP~~C~v~~p 78 (90)
T 1bwo_A 2 DCGHVDSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNC--LKGIARGIHNLNEDNARSIPPKCGVNLP 78 (90)
T ss_dssp CHHHHHHHHGGGHHHHTTCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHH--HHHHHTTCTTCCHHHHHTHHHHHTCCCS
T ss_pred CHHHHHHhhcccHHHHcCCCCCCHHHhHHHHHHHhhccCCCCCCccCcC--ccCchhccCCcCHHHHHHHHHHcCCCCC
Confidence 57766 79999999998766999999999985 25666 66654443 7999999999999999876
No 8
>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*
Probab=99.56 E-value=2.8e-16 Score=99.09 Aligned_cols=65 Identities=31% Similarity=0.745 Sum_probs=51.7
Q ss_pred cCCCCcc--ccccchhhhcCCC-CCchhHHHhcccc-----------cccccccccCccccc-CCCHHHHHHhhcccCCC
Q 034237 32 AVTCSPT--ELSPCLAALTSSA-PPSGACCNKLRQQ-----------RPCLCGYLRNPNLRQ-YVNSPNAKRIVATCGIP 96 (100)
Q Consensus 32 ~~~C~~~--~L~pC~~~v~~~~-~Ps~~CC~~vk~~-----------~~ClC~~l~~~~~~~-~i~~~~a~~Lp~~Cgv~ 96 (100)
+++|+++ .|.||++|+++++ .|+++||+++|++ ..|+| ++...... +||.++|..||++||++
T Consensus 1 a~~C~~v~~~L~pCl~y~~~~~~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC--~~~~~~~~~~in~~~A~~LP~~C~v~ 78 (93)
T 1afh_A 1 AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNAAAGVSGLNAGNAASIPSKCGVS 78 (93)
T ss_dssp CCSSHHHHHHHGGGHHHHTTSCCSCCHHHHHHHHHHHHHCCSSHHHHHHHHH--HHHHHTTSTTCCHHHHHHHHHHHHCC
T ss_pred CCChHHHHHhccCcHHHHcCCCCCChHHHHHHHHHHHHhhcCCCCCcccCEe--eccccccccCcCHHHHHHHHHHcCCC
Confidence 3678876 7999999999864 6888999999997 14555 55432223 79999999999999998
Q ss_pred CC
Q 034237 97 YP 98 (100)
Q Consensus 97 ~p 98 (100)
+|
T Consensus 79 ~p 80 (93)
T 1afh_A 79 IP 80 (93)
T ss_dssp CS
T ss_pred CC
Confidence 76
No 9
>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}
Probab=99.52 E-value=4.1e-16 Score=98.07 Aligned_cols=63 Identities=32% Similarity=0.722 Sum_probs=50.4
Q ss_pred CCCCcc--ccccchhhhcCCCCCchhHHHhcccc-----------cccccccccCccccc-CCCHHHHHHhhcccCCCCC
Q 034237 33 VTCSPT--ELSPCLAALTSSAPPSGACCNKLRQQ-----------RPCLCGYLRNPNLRQ-YVNSPNAKRIVATCGIPYP 98 (100)
Q Consensus 33 ~~C~~~--~L~pC~~~v~~~~~Ps~~CC~~vk~~-----------~~ClC~~l~~~~~~~-~i~~~~a~~Lp~~Cgv~~p 98 (100)
++|+++ .|.||++|+++++.|+ +||+++|++ ..|+| +++..... +||.++|..||++||+++|
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~~P~-~CC~gv~~l~~~a~t~~dr~~~ClC--lk~~~~~~~~in~~~A~~LP~~C~v~~p 78 (91)
T 1t12_A 2 ITCGQVTSNLAPCLAYLRNTGPLG-RCCGGVKALVNSARTTEDRQIACTC--LKSAAGAISGINLGKAAGLPSTCGVNIP 78 (91)
T ss_dssp CCHHHHHHHTHHHHHHHTTSSCCT-THHHHHHHHHHTTCSTHHHHHHHHH--HHHHHHHCTTCCHHHHHHHHHHTTCCCS
T ss_pred CChHHHHHhccCcHHHHcCCCChH-HHHHHHHHHHhhccCCCCCCccCCC--ccccccccCCcChhHHHHHHHHcCCCCC
Confidence 578876 7999999999864588 999999985 24666 66542233 8999999999999999876
No 10
>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1
Probab=95.18 E-value=0.01 Score=35.93 Aligned_cols=61 Identities=34% Similarity=0.666 Sum_probs=45.1
Q ss_pred CCCccccccchhhhcCCCCCchhHHHhcccc-----cccccccccCcccccCCCHHHHHH-hhcccCCCCCC
Q 034237 34 TCSPTELSPCLAALTSSAPPSGACCNKLRQQ-----RPCLCGYLRNPNLRQYVNSPNAKR-IVATCGIPYPR 99 (100)
Q Consensus 34 ~C~~~~L~pC~~~v~~~~~Ps~~CC~~vk~~-----~~ClC~~l~~~~~~~~i~~~~a~~-Lp~~Cgv~~p~ 99 (100)
+|. +|.-|.+-+.+...|...||+-++++ ..|+|..+|- +.. +|...+.+ |-..||...|+
T Consensus 7 ~CP--kLgvCanvL~g~~~~~~~CC~Ll~GL~dleAAvCLCtaik~--Lgi-lnlpv~L~llln~Cgk~~P~ 73 (80)
T 1hyp_A 7 SCP--DLSICLNILGGSLGTVDDCCALIGGLGDIEAIVCLCIQLRA--LGI-LNLNRNLQLILNSCGRSYPS 73 (80)
T ss_dssp CSC--CCGGGGGGGGTCCTTHHHHHHHHHTSCHHHHHHHHHHHHHH--HTC-SCHHHHHHHHHHHTTCSSCC
T ss_pred CCC--chhHHHHHhCcCCCCCCccchhhhCcchhhhhhhhhhhccc--cce-eecChhHHHHHHHhCCcCcC
Confidence 566 78889887754334778899999997 4799988872 344 57766666 56789998773
No 11
>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}
Probab=93.78 E-value=0.0038 Score=47.92 Aligned_cols=45 Identities=29% Similarity=0.724 Sum_probs=33.4
Q ss_pred hhHHHhcccc---cccccccccCcccc---------c--CCCHHHHHHhhcccCCCCC-CC
Q 034237 55 GACCNKLRQQ---RPCLCGYLRNPNLR---------Q--YVNSPNAKRIVATCGIPYP-RC 100 (100)
Q Consensus 55 ~~CC~~vk~~---~~ClC~~l~~~~~~---------~--~i~~~~a~~Lp~~Cgv~~p-~C 100 (100)
.+||+.|++. ++|.|+-|+...-. . .+ ..+|..||..||+..| +|
T Consensus 429 ~~cc~~l~~~~~~~~c~c~~~~~~~~~~~~~~~~~~~~~~~-~~~a~~~p~~c~~~~~~~c 488 (500)
T 3ob4_A 429 ERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQQEQQF-KRELRNLPQQCGLRAPQRC 488 (500)
T ss_dssp HHHHHHHGGGTTCHHHHHHHHHHHHHHHHTTCCSSHHHHHH-HHHHHTHHHHTTCCCCSCC
T ss_pred HHHHHHHHhCCcccccccHHHHHHHHHHHHHhhhHHHHHHH-HHHHhhCchhcCCCCCccC
Confidence 6899999998 48999988753110 0 12 3459999999999977 56
No 12
>1s6d_A Albumin 8; all helix, folded LEAF, right-handed superhelix, disulphide rich, plant protein; NMR {Helianthus annuus} SCOP: a.52.1.3
Probab=91.12 E-value=0.14 Score=32.07 Aligned_cols=61 Identities=18% Similarity=0.353 Sum_probs=43.2
Q ss_pred cccchhhhcCC---C----------CCchhHHHhcccc-cccccccccCcccc-c-C----CCHHHHHHhhcccCCCCCC
Q 034237 40 LSPCLAALTSS---A----------PPSGACCNKLRQQ-RPCLCGYLRNPNLR-Q-Y----VNSPNAKRIVATCGIPYPR 99 (100)
Q Consensus 40 L~pC~~~v~~~---~----------~Ps~~CC~~vk~~-~~ClC~~l~~~~~~-~-~----i~~~~a~~Lp~~Cgv~~p~ 99 (100)
|.+|..|+... . ..-..||+-++.. ..|.|..|+...-. . + -...+|..||+.||++...
T Consensus 21 L~~Cq~yv~qq~~~~~~~~~~~~~e~~~qqCC~qL~~~~~~CrC~al~~~~Q~q~~g~q~~~~~q~A~~LP~~C~i~p~~ 100 (103)
T 1s6d_A 21 LNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLMSQP 100 (103)
T ss_dssp TTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHSCGGGSSHHHHHHTTSTTCSSTHHHHHHHHHHHHHHTTSSSSC
T ss_pred HHHHHHHHHHHhhccCCcccccccHHHHHHHHHHHHhcCcccCcHHHHHHHHHHhcchhHHHHHHHHHhcHHhcCCCccc
Confidence 88999998741 1 1346799999998 68999998754211 1 1 1244688999999997544
Q ss_pred C
Q 034237 100 C 100 (100)
Q Consensus 100 C 100 (100)
|
T Consensus 101 C 101 (103)
T 1s6d_A 101 C 101 (103)
T ss_dssp S
T ss_pred C
Confidence 5
No 13
>1sm7_A Recombinant IB pronapin; all alpha-helix, right-handed superhelix, plant protein; NMR {Brassica napus}
Probab=91.06 E-value=0.031 Score=35.28 Aligned_cols=62 Identities=24% Similarity=0.469 Sum_probs=41.6
Q ss_pred ccccchhhhcC---C-C---CC---------chhHHHhcccc-cccccccccCccc---ccC--------CCHHHHHHhh
Q 034237 39 ELSPCLAALTS---S-A---PP---------SGACCNKLRQQ-RPCLCGYLRNPNL---RQY--------VNSPNAKRIV 90 (100)
Q Consensus 39 ~L~pC~~~v~~---~-~---~P---------s~~CC~~vk~~-~~ClC~~l~~~~~---~~~--------i~~~~a~~Lp 90 (100)
.|.+|..|+.. + + .| -..||+.++.. ..|.|..|+...- ..+ -...+|..||
T Consensus 14 ~L~~C~~yv~qq~~~~~~~~~~~~~~~~~~~~qqCC~qL~~v~~qCrC~al~~~v~~~~~qgq~~~~~~~~~~~~a~~LP 93 (109)
T 1sm7_A 14 HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLP 93 (109)
T ss_dssp CCSSHHHHGGGGTTSSCCCSCSSSCTTCCTTHHHHHHHTTTTCHHHHTTTTHHHHHTSSCSSCCCTTHHHHHHHTTSSHH
T ss_pred cHHHHHHHHHHHhcCCCcccccccccccHHHHHHHHHHHHhcCccCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHhCH
Confidence 38899999862 1 1 12 35799999998 6899998875310 000 1233477899
Q ss_pred cccCCCCC-CC
Q 034237 91 ATCGIPYP-RC 100 (100)
Q Consensus 91 ~~Cgv~~p-~C 100 (100)
+.||+..+ .|
T Consensus 94 ~~Cnl~~~~~C 104 (109)
T 1sm7_A 94 NVCNMKQIGTC 104 (109)
T ss_dssp HHSCCCSSCSS
T ss_pred HhcCCCCCCCC
Confidence 99999854 45
No 14
>2ds2_B Sweet protein mabinlin-2 chain B; plant protein, SEED storage protein; 1.70A {Capparis masaikai}
Probab=90.81 E-value=0.034 Score=32.85 Aligned_cols=47 Identities=38% Similarity=0.794 Sum_probs=33.8
Q ss_pred chhHHHhcccc-cccccccccCcc---ccc---------CCCHHHHHHhhcccCCCC-CCC
Q 034237 54 SGACCNKLRQQ-RPCLCGYLRNPN---LRQ---------YVNSPNAKRIVATCGIPY-PRC 100 (100)
Q Consensus 54 s~~CC~~vk~~-~~ClC~~l~~~~---~~~---------~i~~~~a~~Lp~~Cgv~~-p~C 100 (100)
-..||+.++.. +.|.|..|+... ... .-...+|..||+.||+.. ..|
T Consensus 7 ~qqCC~eL~~~~~~CrC~aL~~~~~~~~qqgq~~~~qq~~~~~q~a~~LP~~C~l~~~~~C 67 (72)
T 2ds2_B 7 LRQCCNQLRQVDRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNIGAC 67 (72)
T ss_dssp HHHHHHHHTTSCGGGHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCTTCCCC
T ss_pred HHHHHHHHHhcCccccCHHHHHHHHHHHHhhhhhchHHHHHHHHHHHhhHHhcCCCCCCcC
Confidence 35799999998 689999988543 000 123557899999999984 345
No 15
>1pnb_B Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3
Probab=86.69 E-value=0.045 Score=32.46 Aligned_cols=49 Identities=24% Similarity=0.457 Sum_probs=34.2
Q ss_pred CCchhHHHhcccc-cccccccccCcc---cc---c-C----CCHHHHHHhhcccCCCC-CCC
Q 034237 52 PPSGACCNKLRQQ-RPCLCGYLRNPN---LR---Q-Y----VNSPNAKRIVATCGIPY-PRC 100 (100)
Q Consensus 52 ~Ps~~CC~~vk~~-~~ClC~~l~~~~---~~---~-~----i~~~~a~~Lp~~Cgv~~-p~C 100 (100)
..-..||+.++.. +.|.|..|+... .. . + -...+|..||+.||+.. ..|
T Consensus 9 ~~~qqCC~qL~~~~~~CrC~aL~~~~~~~~~qgq~~~~q~~~~~q~a~~LP~~Cnl~~~~~C 70 (75)
T 1pnb_B 9 WLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQIGTC 70 (75)
T ss_dssp SCTHHHHHHHHTSCGGGSHHHHHHHHHHHHSGGGCSSCCHHHHHHHCCSCSCSSCCTTTCCC
T ss_pred HHHHHHHHHHHhCCcccccHHHHHHHHHHHHHcccchHHHHHHHHHHHhhHHhcCCCCCCCC
Confidence 4457899999998 689999887542 00 1 1 12446778999999984 345
No 16
>1psy_A 2S albumin, RICC3; albumin SEED protein, SEED storage protein, plant protein; NMR {Ricinus communis} SCOP: a.52.1.3
Probab=84.17 E-value=0.13 Score=33.41 Aligned_cols=57 Identities=30% Similarity=0.592 Sum_probs=40.3
Q ss_pred ccccchhhhcCC----C-------CC-----------chhHHHhcccc-cccccccccCccc------cc-C--C--CHH
Q 034237 39 ELSPCLAALTSS----A-------PP-----------SGACCNKLRQQ-RPCLCGYLRNPNL------RQ-Y--V--NSP 84 (100)
Q Consensus 39 ~L~pC~~~v~~~----~-------~P-----------s~~CC~~vk~~-~~ClC~~l~~~~~------~~-~--i--~~~ 84 (100)
.|.+|..|+... . .| -..||+.|+.. +.|.|..|+...- .. + + -..
T Consensus 26 ~L~~Cq~yv~qq~~~~~~~~~~~~~~~~e~~~qe~~~~qqCC~qL~~~~~~C~C~aL~~~v~~~~qQgq~~gqq~~~~~q 105 (125)
T 1psy_A 26 DLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQVRDECQCEAIKYIAEDQIQQGQLHGEESERVAQ 105 (125)
T ss_dssp TTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTCCSSHHHHHHHHHHHHHHHHTTCCTTCSHHHHH
T ss_pred hHHHHHHHHHHHHhcccCcchhhhcchhhcccccHHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 689999998631 1 13 25799999998 7899999865320 01 1 1 245
Q ss_pred HHHHhhcccCC
Q 034237 85 NAKRIVATCGI 95 (100)
Q Consensus 85 ~a~~Lp~~Cgv 95 (100)
+|.+||+.||+
T Consensus 106 ~A~~LP~~C~i 116 (125)
T 1psy_A 106 RAGEIVSSCGV 116 (125)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHhhHHHcCC
Confidence 68999999998
No 17
>1w2q_A Conglutin, ARA H 6; allergen, allergene; NMR {Arachis hypogaea}
Probab=83.24 E-value=0.24 Score=32.25 Aligned_cols=59 Identities=19% Similarity=0.462 Sum_probs=41.3
Q ss_pred ccccchhhhcCC---CC----C-----------chhHHHhcccc---cccccccccCccc----cc-C--CC---HHHHH
Q 034237 39 ELSPCLAALTSS---AP----P-----------SGACCNKLRQQ---RPCLCGYLRNPNL----RQ-Y--VN---SPNAK 87 (100)
Q Consensus 39 ~L~pC~~~v~~~---~~----P-----------s~~CC~~vk~~---~~ClC~~l~~~~~----~~-~--i~---~~~a~ 87 (100)
.|.+|..|+... .. + -..||+.|+.. +.|.|..|+.... .. + .. ..+|.
T Consensus 24 qL~~Cq~yl~q~~~~~~~~~~~~~~~~~~~e~~lqqCC~qL~q~~~~~qCrCeaL~q~~Q~qq~q~~gqq~~~~~~q~A~ 103 (127)
T 1w2q_A 24 NLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELM 103 (127)
T ss_dssp CCHHHHHHHHTGGGSSSSSCSCCCTTSCCHHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHSCTTTTTSTTHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhccCCccchhhcccccHHHHHHHHHHHHhhccCCCccCHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 688999998631 10 1 25799999988 5899999886431 11 1 22 45689
Q ss_pred HhhcccCCCC
Q 034237 88 RIVATCGIPY 97 (100)
Q Consensus 88 ~Lp~~Cgv~~ 97 (100)
.||..||++-
T Consensus 104 ~LP~~C~i~~ 113 (127)
T 1w2q_A 104 SLPQQCNFRA 113 (127)
T ss_dssp HHHHHHTCCC
T ss_pred HhHHhcCCCC
Confidence 9999999943
No 18
>1hss_A 0.19 alpha-amylase inhibitor; cereal inhibitor, animal amylase; 2.06A {Triticum aestivum} SCOP: a.52.1.2
Probab=81.39 E-value=0.16 Score=33.09 Aligned_cols=60 Identities=28% Similarity=0.506 Sum_probs=40.4
Q ss_pred ccccchhhhcC---CC-CC---chhHHHhcccc-cccccccccCcc---cc-cC-----------------CCHHHHHHh
Q 034237 39 ELSPCLAALTS---SA-PP---SGACCNKLRQQ-RPCLCGYLRNPN---LR-QY-----------------VNSPNAKRI 89 (100)
Q Consensus 39 ~L~pC~~~v~~---~~-~P---s~~CC~~vk~~-~~ClC~~l~~~~---~~-~~-----------------i~~~~a~~L 89 (100)
.|..|..|+.. +. .| ...||+.|++. ..|-|..|.... .. .+ +-.+.|..|
T Consensus 16 pL~~Cr~Yv~~~C~g~~~p~~~~~~CC~QL~~i~~~CRC~ALr~m~~~~~~~~g~~~g~~~~e~~pgCrre~~~~~A~~L 95 (124)
T 1hss_A 16 ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEHGAQEGQAGTGAFPRCRREVVKLTAASI 95 (124)
T ss_dssp CCTTHHHHHHHHTTTCCCCHHHHHHHHHHHHTSCTTTHHHHHHHHHHHHHHHC---------CCSTTCCHHHHHHHHTTH
T ss_pred cchHHHHHHHHHccCCCCcHHHHHHHHHHHHhcCcccchHHHHHHHHhhhhhhhhhccccchhhccCCcHHHHHHHHHhc
Confidence 58899999963 22 23 35699999998 689998776421 00 00 112258889
Q ss_pred hcccCCCCC
Q 034237 90 VATCGIPYP 98 (100)
Q Consensus 90 p~~Cgv~~p 98 (100)
|+.||+..+
T Consensus 96 P~~Cnl~~~ 104 (124)
T 1hss_A 96 TAVCRLPIV 104 (124)
T ss_dssp HHHTTCCEE
T ss_pred hhhcCCCCC
Confidence 999999765
No 19
>1bea_A Bifunctional amylase/serine protease inhibitor; amylase/protease bifunctional inhibitor; 1.95A {Zea mays} SCOP: a.52.1.2 PDB: 1bfa_A
Probab=75.26 E-value=0.82 Score=29.73 Aligned_cols=60 Identities=23% Similarity=0.341 Sum_probs=40.5
Q ss_pred ccccchhhhcC-----CC-CC----chhHHHhcccc-cccccccccCcc---cc-------cCC---C--------HHHH
Q 034237 39 ELSPCLAALTS-----SA-PP----SGACCNKLRQQ-RPCLCGYLRNPN---LR-------QYV---N--------SPNA 86 (100)
Q Consensus 39 ~L~pC~~~v~~-----~~-~P----s~~CC~~vk~~-~~ClC~~l~~~~---~~-------~~i---~--------~~~a 86 (100)
.|..|..|+.. +. .| ...||+.+++. ..|-|..|.... +. .+. - .+.|
T Consensus 16 pL~~CR~Yv~~q~C~~g~~~p~e~~~~~CC~QL~~i~~~CRC~ALr~m~~~~~~~~~~~~~~G~~~~~pgC~re~~~~~A 95 (127)
T 1bea_A 16 PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFA 95 (127)
T ss_dssp CCHHHHHHHHHHHHSCCCSSCHHHHHHHHHHHHHTSCGGGHHHHHHHHHHCBCCCSSSCCCBCCCCCBTTBCHHHHHHHH
T ss_pred cchHHHHHHHHhhcccCCCCchHHHHHHHHHHHHhcCcccchHHHHHHHHhhhcccccccccccccccCCCcHHHHHHHH
Confidence 57889999852 22 23 34599999998 689998775421 10 111 1 3358
Q ss_pred HHh--hcccCCCCC
Q 034237 87 KRI--VATCGIPYP 98 (100)
Q Consensus 87 ~~L--p~~Cgv~~p 98 (100)
..| |+.||+..+
T Consensus 96 ~~Lv~P~~Cnl~~~ 109 (127)
T 1bea_A 96 ATLVTEAECNLATI 109 (127)
T ss_dssp TTTTSTTTTCCCCT
T ss_pred HhcCCcccCCCCCC
Confidence 889 999999876
No 20
>2lvf_A 2S albumin; allergen, copper binding, hydrophobic interaction; NMR {Bertholletia excelsa}
Probab=60.21 E-value=3.9 Score=25.81 Aligned_cols=62 Identities=27% Similarity=0.501 Sum_probs=41.2
Q ss_pred ccccchhhhcC----CC---CCc-------hhHHHhcccc-cccccccccCcc---c-ccC-C-------CHHHHHHhhc
Q 034237 39 ELSPCLAALTS----SA---PPS-------GACCNKLRQQ-RPCLCGYLRNPN---L-RQY-V-------NSPNAKRIVA 91 (100)
Q Consensus 39 ~L~pC~~~v~~----~~---~Ps-------~~CC~~vk~~-~~ClC~~l~~~~---~-~~~-i-------~~~~a~~Lp~ 91 (100)
.|..|..|+.. +. .+. ..||+.|+.. ..|.|.-|+... . ..+ + -...|.+||+
T Consensus 17 ~L~~Cq~yv~qq~~~~~~~~~~~~~~~~~l~~CC~qL~qv~~~CrC~aL~~~v~~~~qq~~~~~~~~~~~~~q~A~~LP~ 96 (114)
T 2lvf_A 17 MLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGMDESCRCEGLRMMMRMMQQKEMQPRGEQMRRMMRLAENIPS 96 (114)
T ss_dssp HHHHHHHHHHHHHHTTTTCSCCSSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHHHHCCcCccCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhChH
Confidence 47889999852 11 111 3499999998 589999887532 1 111 1 1447999999
Q ss_pred ccCCCCCCC
Q 034237 92 TCGIPYPRC 100 (100)
Q Consensus 92 ~Cgv~~p~C 100 (100)
.||+..-.|
T Consensus 97 ~C~i~p~~C 105 (114)
T 2lvf_A 97 RCNLSPMRC 105 (114)
T ss_dssp HHCCCCSCC
T ss_pred hcCCCcccC
Confidence 999984345
No 21
>1b1u_A Protein (alpha-amylase/trypsin inhibitor RATI); bifunctional, hydrolase inhibitor; 2.20A {Eleusine coracana} SCOP: a.52.1.2 PDB: 1bip_A 1tmq_B
Probab=27.79 E-value=20 Score=22.87 Aligned_cols=61 Identities=16% Similarity=0.355 Sum_probs=40.7
Q ss_pred ccccchhhhcC-----CC-CC----chhHHHhcccc-cccccccccCcc---cc-----c----CC--------CHHHHH
Q 034237 39 ELSPCLAALTS-----SA-PP----SGACCNKLRQQ-RPCLCGYLRNPN---LR-----Q----YV--------NSPNAK 87 (100)
Q Consensus 39 ~L~pC~~~v~~-----~~-~P----s~~CC~~vk~~-~~ClC~~l~~~~---~~-----~----~i--------~~~~a~ 87 (100)
.|..|..|+.. ++ .| ...||+.|++. ..|-|..|.... +. . +. -...|.
T Consensus 16 ~L~~Cr~Yv~~q~C~~g~~~p~~~~~~~CC~QL~~i~~~CRC~ALr~m~~~~~~~~g~~~g~~~~~~pgC~re~~~~~A~ 95 (122)
T 1b1u_A 16 PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAP 95 (122)
T ss_dssp TTTHHHHHHHHHHHCCCCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHTCEECTTSCEECCCCCCCTTCCHHHHHHHGG
T ss_pred cchHHHHHHHHhcccCCCCCchHHHHHHHHHHHHhCCccccHHHHHHHHHhhhhhhcccccccchhccCCcHHHHHHHHH
Confidence 58899999852 12 34 34699999998 589998775421 10 0 11 113578
Q ss_pred Hh--hcccCCCCCC
Q 034237 88 RI--VATCGIPYPR 99 (100)
Q Consensus 88 ~L--p~~Cgv~~p~ 99 (100)
.| |+.||++.++
T Consensus 96 ~Lv~P~~Cnl~~~~ 109 (122)
T 1b1u_A 96 KLVTEVECNLATIH 109 (122)
T ss_dssp GTTSTTTTCCCCTT
T ss_pred hcCCcccCCCCCCC
Confidence 89 9999998764
Done!