BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034238
(100 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224095003|ref|XP_002310323.1| predicted protein [Populus trichocarpa]
gi|118487937|gb|ABK95790.1| unknown [Populus trichocarpa]
gi|222853226|gb|EEE90773.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/100 (73%), Positives = 83/100 (83%), Gaps = 1/100 (1%)
Query: 1 MAMVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFY 60
++M+RS LL+ +LR S S AP +RGF+SSAHHDDAYE AKWEKI YLG ATCT+LA Y
Sbjct: 3 ISMMRSALLRNSLRSASKPS-APTRRGFSSSAHHDDAYEAAKWEKIAYLGAATCTILAIY 61
Query: 61 NLSKGHPHYEEPPRYEYLHIRNKEFPWGPDGLFEKKPEHH 100
NLSKGHPHYE PP Y YLHIRNKEFPWGP+GLFE K +HH
Sbjct: 62 NLSKGHPHYETPPEYPYLHIRNKEFPWGPNGLFEVKEDHH 101
>gi|388493726|gb|AFK34929.1| unknown [Lotus japonicus]
gi|388511333|gb|AFK43728.1| unknown [Lotus japonicus]
Length = 102
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/99 (75%), Positives = 80/99 (80%)
Query: 2 AMVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFYN 61
A+VRS LL+T LR + S PKR F+SS HDDAYETAKWEKITYLGIA+CT LA Y
Sbjct: 4 ALVRSALLRTTLRGGARGGSLTPKRNFSSSGGHDDAYETAKWEKITYLGIASCTALAAYC 63
Query: 62 LSKGHPHYEEPPRYEYLHIRNKEFPWGPDGLFEKKPEHH 100
LSKGHPHYEEPP Y YLHIRNKEFPWGPDGLFE K EHH
Sbjct: 64 LSKGHPHYEEPPAYPYLHIRNKEFPWGPDGLFETKHEHH 102
>gi|225438196|ref|XP_002264013.1| PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial [Vitis
vinifera]
gi|297745701|emb|CBI41023.3| unnamed protein product [Vitis vinifera]
Length = 98
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/99 (78%), Positives = 84/99 (84%), Gaps = 3/99 (3%)
Query: 1 MAMVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFY 60
MAMVRSGL +TALR S +A PKR ++SSA HDDA ETAKWEKITYLGIATCTVLA
Sbjct: 3 MAMVRSGL-RTALR--SRTPAAAPKRNYSSSAGHDDARETAKWEKITYLGIATCTVLAVV 59
Query: 61 NLSKGHPHYEEPPRYEYLHIRNKEFPWGPDGLFEKKPEH 99
NLSKGHPH+EEPPRY+YLHIRNKEFPWGPDGLFE K H
Sbjct: 60 NLSKGHPHHEEPPRYDYLHIRNKEFPWGPDGLFETKQHH 98
>gi|351721032|ref|NP_001236940.1| uncharacterized protein LOC100527245 [Glycine max]
gi|255631866|gb|ACU16300.1| unknown [Glycine max]
Length = 102
Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/95 (75%), Positives = 80/95 (84%), Gaps = 1/95 (1%)
Query: 2 AMVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFYN 61
++VRSG L++ALR S+ S PKR FASS HHDDAYETAKWEKITYLGI +CT LA YN
Sbjct: 4 SLVRSGFLRSALRG-SARGSQVPKRNFASSGHHDDAYETAKWEKITYLGIVSCTGLAVYN 62
Query: 62 LSKGHPHYEEPPRYEYLHIRNKEFPWGPDGLFEKK 96
LSKGHPH++EPP Y YLHIRNKEFPWGPDGLFE K
Sbjct: 63 LSKGHPHFKEPPAYPYLHIRNKEFPWGPDGLFETK 97
>gi|351725137|ref|NP_001236314.1| uncharacterized protein LOC100499808 [Glycine max]
gi|255626789|gb|ACU13739.1| unknown [Glycine max]
Length = 102
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/95 (75%), Positives = 79/95 (83%), Gaps = 1/95 (1%)
Query: 2 AMVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFYN 61
++VRSG L++ALR + SS PKR FASS HHDDAYETAKWEKITYLGI CT LA YN
Sbjct: 4 SLVRSGFLRSALRG-RARSSQVPKRNFASSGHHDDAYETAKWEKITYLGIVGCTGLAVYN 62
Query: 62 LSKGHPHYEEPPRYEYLHIRNKEFPWGPDGLFEKK 96
LSKGHPH++EPP Y YLHIRNKEFPWGPDGLFE K
Sbjct: 63 LSKGHPHFKEPPAYPYLHIRNKEFPWGPDGLFETK 97
>gi|449478071|ref|XP_004155214.1| PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial-like
isoform 2 [Cucumis sativus]
Length = 98
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/96 (76%), Positives = 81/96 (84%), Gaps = 2/96 (2%)
Query: 1 MAMVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFY 60
MA +RS LL+ ALR +S +S PKRGFASSAH DDA ETAKWEKITY GI TC++LAFY
Sbjct: 3 MASIRSNLLRAALRG-ASRNSVQPKRGFASSAH-DDARETAKWEKITYAGIVTCSILAFY 60
Query: 61 NLSKGHPHYEEPPRYEYLHIRNKEFPWGPDGLFEKK 96
NLSKGHPH+EEPP Y Y+HIRNKEFPWGPDGLFE K
Sbjct: 61 NLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFEVK 96
>gi|357476589|ref|XP_003608580.1| hypothetical protein MTR_4g097800 [Medicago truncatula]
gi|355509635|gb|AES90777.1| hypothetical protein MTR_4g097800 [Medicago truncatula]
gi|388495124|gb|AFK35628.1| unknown [Medicago truncatula]
Length = 103
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/100 (71%), Positives = 80/100 (80%), Gaps = 1/100 (1%)
Query: 2 AMVRSGLLQTALRRVSSASSAPPKRGFASSA-HHDDAYETAKWEKITYLGIATCTVLAFY 60
++RSG ++ LRR S +S PKR F+SS+ HHDDAYETAKWEKITYLGI +CT LA Y
Sbjct: 4 TLMRSGFIRNVLRRGGSGASPAPKRNFSSSSGHHDDAYETAKWEKITYLGIVSCTGLAVY 63
Query: 61 NLSKGHPHYEEPPRYEYLHIRNKEFPWGPDGLFEKKPEHH 100
LSKGH HY+EPP Y YLHIRNKEFPWGPDGLFE K EHH
Sbjct: 64 ILSKGHHHYDEPPAYPYLHIRNKEFPWGPDGLFEIKEEHH 103
>gi|255582409|ref|XP_002531993.1| cytochrome-c oxidase, putative [Ricinus communis]
gi|223528352|gb|EEF30392.1| cytochrome-c oxidase, putative [Ricinus communis]
Length = 101
Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/98 (71%), Positives = 80/98 (81%), Gaps = 5/98 (5%)
Query: 2 AMVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETA---KWEKITYLGIATCTVLA 58
A++RSGL + ALR S SAP KR F+SSAHHDDAYE A KWEKITY+ IA+C++LA
Sbjct: 4 ALMRSGL-RNALRG-GSKPSAPLKRRFSSSAHHDDAYEAAEASKWEKITYVAIASCSILA 61
Query: 59 FYNLSKGHPHYEEPPRYEYLHIRNKEFPWGPDGLFEKK 96
YNLSKGHPH+EEPP Y Y+HIRNKEFPWGPDGLFE K
Sbjct: 62 IYNLSKGHPHHEEPPAYPYMHIRNKEFPWGPDGLFESK 99
>gi|297798092|ref|XP_002866930.1| hypothetical protein ARALYDRAFT_912546 [Arabidopsis lyrata subsp.
lyrata]
gi|297312766|gb|EFH43189.1| hypothetical protein ARALYDRAFT_912546 [Arabidopsis lyrata subsp.
lyrata]
Length = 102
Score = 137 bits (346), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 67/95 (70%), Positives = 76/95 (80%), Gaps = 1/95 (1%)
Query: 2 AMVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFYN 61
A+VRS L + A+R V+ +S PKR F+SSA HDDAYE AKWEKITYLGIA+CT LA Y
Sbjct: 4 AIVRSALSRAAIR-VAPRTSVAPKRNFSSSAGHDDAYEAAKWEKITYLGIASCTALAVYV 62
Query: 62 LSKGHPHYEEPPRYEYLHIRNKEFPWGPDGLFEKK 96
LSKGH H E+PP Y Y+HIRNKEFPWGPDGLFE K
Sbjct: 63 LSKGHHHGEDPPAYPYMHIRNKEFPWGPDGLFEVK 97
>gi|226532722|ref|NP_001145536.1| uncharacterized protein LOC100278971 [Zea mays]
gi|195657649|gb|ACG48292.1| hypothetical protein [Zea mays]
Length = 94
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/98 (69%), Positives = 73/98 (74%), Gaps = 7/98 (7%)
Query: 2 AMVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFYN 61
A RSGL A+R A P R SS+ HDDAYETAKWEKITY GI TCT+LA YN
Sbjct: 4 AAARSGLRSLAVR-------AAPLRRRMSSSVHDDAYETAKWEKITYAGIVTCTLLAAYN 56
Query: 62 LSKGHPHYEEPPRYEYLHIRNKEFPWGPDGLFEKKPEH 99
LSKGHPH++EPP Y YLHIRNKEFPWGPDGLFEKK H
Sbjct: 57 LSKGHPHFDEPPAYPYLHIRNKEFPWGPDGLFEKKDHH 94
>gi|226499360|ref|NP_001142528.1| uncharacterized protein LOC100274770 [Zea mays]
gi|195605960|gb|ACG24810.1| hypothetical protein [Zea mays]
gi|195618996|gb|ACG31328.1| hypothetical protein [Zea mays]
Length = 94
Score = 134 bits (337), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 67/98 (68%), Positives = 72/98 (73%), Gaps = 7/98 (7%)
Query: 2 AMVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFYN 61
A RSGL A+R A P R SS+ HDDAYETAKWEKITY GI TCT+LA YN
Sbjct: 4 AAARSGLRSLAVR-------AAPLRRRMSSSVHDDAYETAKWEKITYAGIVTCTLLAAYN 56
Query: 62 LSKGHPHYEEPPRYEYLHIRNKEFPWGPDGLFEKKPEH 99
LSKGHPH++EPP Y YLHIRNKEFPWGPDGLFE K H
Sbjct: 57 LSKGHPHFDEPPAYPYLHIRNKEFPWGPDGLFETKDHH 94
>gi|15235720|ref|NP_195496.1| cytochrome c oxidase subunit VIa [Arabidopsis thaliana]
gi|75213718|sp|Q9T070.1|COX6A_ARATH RecName: Full=Cytochrome c oxidase subunit 6a, mitochondrial;
Short=AtCOX6a; Flags: Precursor
gi|11908090|gb|AAG41474.1|AF326892_1 unknown protein [Arabidopsis thaliana]
gi|12642898|gb|AAK00391.1|AF339709_1 unknown protein [Arabidopsis thaliana]
gi|14190491|gb|AAK55726.1|AF380645_1 AT4g37830/T28I19_110 [Arabidopsis thaliana]
gi|4490728|emb|CAB38931.1| putative protein [Arabidopsis thaliana]
gi|7270766|emb|CAB80448.1| putative protein [Arabidopsis thaliana]
gi|15810105|gb|AAL06978.1| AT4g37830/T28I19_110 [Arabidopsis thaliana]
gi|110737597|dbj|BAF00740.1| hypothetical protein [Arabidopsis thaliana]
gi|332661442|gb|AEE86842.1| cytochrome c oxidase subunit VIa [Arabidopsis thaliana]
Length = 102
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/95 (68%), Positives = 75/95 (78%), Gaps = 1/95 (1%)
Query: 2 AMVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFYN 61
A+VRS L + A+ R + +S PKR F+SSA HDDAYE AKWEKITYLGIA+CT LA Y
Sbjct: 4 AIVRSALSR-AVTRAAPKTSVAPKRNFSSSAGHDDAYEAAKWEKITYLGIASCTALAVYV 62
Query: 62 LSKGHPHYEEPPRYEYLHIRNKEFPWGPDGLFEKK 96
LSKGH H E+PP Y ++HIRNKEFPWGPDGLFE K
Sbjct: 63 LSKGHHHGEDPPAYPHMHIRNKEFPWGPDGLFEVK 97
>gi|194707564|gb|ACF87866.1| unknown [Zea mays]
Length = 94
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/98 (68%), Positives = 72/98 (73%), Gaps = 7/98 (7%)
Query: 2 AMVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFYN 61
A RSGL A+R A P R SS+ HDDAYETAKWEKITY GI TCT+LA YN
Sbjct: 4 AAARSGLRSLAVR-------AGPLRRRMSSSVHDDAYETAKWEKITYAGIVTCTLLAAYN 56
Query: 62 LSKGHPHYEEPPRYEYLHIRNKEFPWGPDGLFEKKPEH 99
LSKGHPH++EPP Y YLHIRNKEFPWGPDGLFE K H
Sbjct: 57 LSKGHPHFDEPPAYPYLHIRNKEFPWGPDGLFETKDHH 94
>gi|195605644|gb|ACG24652.1| hypothetical protein [Zea mays]
Length = 94
Score = 130 bits (328), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 66/98 (67%), Positives = 71/98 (72%), Gaps = 7/98 (7%)
Query: 2 AMVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFYN 61
A RSGL A+R A P R SS+ HDDAYETAKWEKITY GI TCT+LA YN
Sbjct: 4 AAARSGLRSLAVR-------AGPLRRRMSSSVHDDAYETAKWEKITYAGIVTCTLLAAYN 56
Query: 62 LSKGHPHYEEPPRYEYLHIRNKEFPWGPDGLFEKKPEH 99
LSKGHPH++EP Y YLHIRNKEFPWGPDGLFE K H
Sbjct: 57 LSKGHPHFDEPXAYPYLHIRNKEFPWGPDGLFETKDHH 94
>gi|21595807|gb|AAM66133.1| unknown [Arabidopsis thaliana]
Length = 102
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/95 (68%), Positives = 72/95 (75%), Gaps = 1/95 (1%)
Query: 2 AMVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFYN 61
A+VRS L + A R S AP KR F+SSA HDDAYE AKWEKITYLGIA+CT LA Y
Sbjct: 4 AIVRSALSRAATRAAPKTSVAP-KRNFSSSAGHDDAYEAAKWEKITYLGIASCTALAVYV 62
Query: 62 LSKGHPHYEEPPRYEYLHIRNKEFPWGPDGLFEKK 96
LSKGH E+PP Y ++HIRNKEFPWGPDGLFE K
Sbjct: 63 LSKGHHPGEDPPAYPHMHIRNKEFPWGPDGLFEVK 97
>gi|449478068|ref|XP_004155213.1| PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial-like
isoform 1 [Cucumis sativus]
Length = 141
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/139 (52%), Positives = 81/139 (58%), Gaps = 45/139 (32%)
Query: 1 MAMVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFY 60
MA +RS LL+ ALR +S +S PKRGFASSAH DDA ETAKWEKITY GI TC++LAFY
Sbjct: 3 MASIRSNLLRAALRG-ASRNSVQPKRGFASSAH-DDARETAKWEKITYAGIVTCSILAFY 60
Query: 61 NLSKGHPHYEEPP-------------------------------------------RYEY 77
NLSKGHPH+EEPP Y Y
Sbjct: 61 NLSKGHPHHEEPPVSYNFSQFILFPQVLSTLVELWNYVLYSHVLTIYFCLGFHCMQAYPY 120
Query: 78 LHIRNKEFPWGPDGLFEKK 96
+HIRNKEFPWGPDGLFE K
Sbjct: 121 MHIRNKEFPWGPDGLFEVK 139
>gi|242037971|ref|XP_002466380.1| hypothetical protein SORBIDRAFT_01g006750 [Sorghum bicolor]
gi|241920234|gb|EER93378.1| hypothetical protein SORBIDRAFT_01g006750 [Sorghum bicolor]
Length = 94
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 58/70 (82%), Positives = 62/70 (88%)
Query: 30 SSAHHDDAYETAKWEKITYLGIATCTVLAFYNLSKGHPHYEEPPRYEYLHIRNKEFPWGP 89
SS+ HDDAYETAKWEKITY GI TCT+LA YNLSKGHPH++EPP Y YLHIRNKEFPWGP
Sbjct: 25 SSSVHDDAYETAKWEKITYAGIVTCTLLAAYNLSKGHPHFDEPPAYPYLHIRNKEFPWGP 84
Query: 90 DGLFEKKPEH 99
DGLFEKK H
Sbjct: 85 DGLFEKKDHH 94
>gi|115455623|ref|NP_001051412.1| Os03g0772800 [Oryza sativa Japonica Group]
gi|31745230|gb|AAP68890.1| putative cytochrome c oxidase subunit VIa precursor [Oryza sativa
Japonica Group]
gi|108711306|gb|ABF99101.1| Cytochrome c oxidase subunit VIa family protein, expressed [Oryza
sativa Japonica Group]
gi|113549883|dbj|BAF13326.1| Os03g0772800 [Oryza sativa Japonica Group]
gi|218193823|gb|EEC76250.1| hypothetical protein OsI_13691 [Oryza sativa Indica Group]
gi|222625879|gb|EEE60011.1| hypothetical protein OsJ_12754 [Oryza sativa Japonica Group]
gi|313575820|gb|ADR66989.1| cytochrome c oxidase [Oryza sativa Japonica Group]
Length = 98
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 60/67 (89%)
Query: 30 SSAHHDDAYETAKWEKITYLGIATCTVLAFYNLSKGHPHYEEPPRYEYLHIRNKEFPWGP 89
SS+ HDDA+ETAKWEKITY GI TCT+LA YNLSKGHPH++EPP Y YLHIRNKEFPWGP
Sbjct: 30 SSSAHDDAHETAKWEKITYAGIVTCTLLAAYNLSKGHPHFDEPPAYPYLHIRNKEFPWGP 89
Query: 90 DGLFEKK 96
DGLFE K
Sbjct: 90 DGLFENK 96
>gi|326532212|dbj|BAK01482.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 99
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/70 (75%), Positives = 60/70 (85%)
Query: 30 SSAHHDDAYETAKWEKITYLGIATCTVLAFYNLSKGHPHYEEPPRYEYLHIRNKEFPWGP 89
SS+ HDDAYETAKWEKIT +G TCT+LA +NLSKGHPHY+EPP Y YL IRNKEFPWGP
Sbjct: 30 SSSAHDDAYETAKWEKITIMGAVTCTLLAAWNLSKGHPHYDEPPAYPYLRIRNKEFPWGP 89
Query: 90 DGLFEKKPEH 99
+GLFE K +H
Sbjct: 90 NGLFEVKHDH 99
>gi|242089671|ref|XP_002440668.1| hypothetical protein SORBIDRAFT_09g004850 [Sorghum bicolor]
gi|241945953|gb|EES19098.1| hypothetical protein SORBIDRAFT_09g004850 [Sorghum bicolor]
Length = 114
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 3/85 (3%)
Query: 18 SASSAPPKRGFASSA---HHDDAYETAKWEKITYLGIATCTVLAFYNLSKGHPHYEEPPR 74
SA + +RGFA+SA HDDA E KWE+ITY GIATCTVLA +NLSKGH + +PP
Sbjct: 15 SAGTVLRRRGFAASATARRHDDAKEAVKWERITYAGIATCTVLAMFNLSKGHQEFPDPPP 74
Query: 75 YEYLHIRNKEFPWGPDGLFEKKPEH 99
YLHIRNK+FPWGPDGLFE+K +H
Sbjct: 75 NPYLHIRNKDFPWGPDGLFERKKKH 99
>gi|145334259|ref|NP_001078510.1| cytochrome c oxidase subunit VIa [Arabidopsis thaliana]
gi|332661443|gb|AEE86843.1| cytochrome c oxidase subunit VIa [Arabidopsis thaliana]
Length = 92
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 67/95 (70%), Gaps = 11/95 (11%)
Query: 2 AMVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFYN 61
A+VRS L + A+ R + +S PKR F+SSA HDDAYE AKWEKITYLGIA+CT LA Y
Sbjct: 4 AIVRSALSR-AVTRAAPKTSVAPKRNFSSSAGHDDAYEAAKWEKITYLGIASCTALAVYV 62
Query: 62 LSKGHPHYEEPPRYEYLHIRNKEFPWGPDGLFEKK 96
LSKGH H E+PP EFPWGPDGLFE K
Sbjct: 63 LSKGHHHGEDPP----------EFPWGPDGLFEVK 87
>gi|116779712|gb|ABK21401.1| unknown [Picea sitchensis]
gi|116794225|gb|ABK27052.1| unknown [Picea sitchensis]
gi|148906062|gb|ABR16190.1| unknown [Picea sitchensis]
Length = 106
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 52/68 (76%)
Query: 32 AHHDDAYETAKWEKITYLGIATCTVLAFYNLSKGHPHYEEPPRYEYLHIRNKEFPWGPDG 91
A HDDAYET KW+KIT GI CT LA Y+LS H H+EE P Y YLHIRNKEFPWGPDG
Sbjct: 36 AGHDDAYETEKWKKITIAGIIACTALATYSLSGEHEHFEESPAYPYLHIRNKEFPWGPDG 95
Query: 92 LFEKKPEH 99
LFE+K H
Sbjct: 96 LFERKKHH 103
>gi|168024930|ref|XP_001764988.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683797|gb|EDQ70204.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 112
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 57/99 (57%), Gaps = 8/99 (8%)
Query: 4 VRSGLLQTALRRVSSASSAPPKRGFASSAH-HDDAYETAKWEKITYLGIATCTVLAFYNL 62
V S L QTA A KR FAS +H HDDA ETAKW IT C + Y L
Sbjct: 17 VASPLSQTA------RDGAVAKRFFASKSHAHDDAEETAKWRSITIAAYIMCVGMGIYTL 70
Query: 63 S-KGHPHYEEPPRYEYLHIRNKEFPWGPDGLFEKKPEHH 100
+ + H H E P Y YLHIRNK+FPWGPDGLFE K E H
Sbjct: 71 ANEEHGHGGETPGYSYLHIRNKQFPWGPDGLFEYKHESH 109
>gi|168019261|ref|XP_001762163.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686567|gb|EDQ72955.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 112
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 60/106 (56%), Gaps = 8/106 (7%)
Query: 3 MVRSGLLQTALRRVSS------ASSAPPKRGFASSAH-HDDAYETAKWEKITYLGIATCT 55
+VR L R +SS + A KR FAS +H HDDA ETAKW IT C
Sbjct: 4 LVRQRLGALLSRPISSPLGQTAQTGAASKRFFASKSHAHDDAEETAKWRSITIAAYIMCI 63
Query: 56 VLAFYNLS-KGHPHYEEPPRYEYLHIRNKEFPWGPDGLFEKKPEHH 100
+ Y L+ + H H E P Y YLHIRNK+FPWGPDGLFE K E H
Sbjct: 64 GMGIYILANEEHGHDGEKPGYSYLHIRNKQFPWGPDGLFEYKHEGH 109
>gi|414873092|tpg|DAA51649.1| TPA: hypothetical protein ZEAMMB73_591450 [Zea mays]
Length = 65
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 45/66 (68%), Gaps = 7/66 (10%)
Query: 2 AMVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFYN 61
A RSGL A+R A P R SS+ HDDAYETAKWEKITY GI TCT+LA YN
Sbjct: 4 AAARSGLRSLAVR-------AGPLRRRMSSSVHDDAYETAKWEKITYAGIVTCTLLAAYN 56
Query: 62 LSKGHP 67
LSKGHP
Sbjct: 57 LSKGHP 62
>gi|326500484|dbj|BAK06331.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 76
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 36/44 (81%)
Query: 49 LGIATCTVLAFYNLSKGHPHYEEPPRYEYLHIRNKEFPWGPDGL 92
+G TCT+LA +NLSKGHPHY+EPP Y YL IRNKEFPWG + L
Sbjct: 1 MGAVTCTLLAAWNLSKGHPHYDEPPAYPYLRIRNKEFPWGMNLL 44
>gi|384253669|gb|EIE27143.1| hypothetical protein COCSUDRAFT_52086 [Coccomyxa subellipsoidea
C-169]
Length = 106
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 11 TALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFYNLSKGHPHYE 70
+ LR++ S A +H ++ + W+K++ I C +A ++LS H H
Sbjct: 17 SQLRQIRQMSGA--------VSHEEEIKQMYFWQKVSLAAIPVCVGVAIWDLSHAHEHDH 68
Query: 71 EPPRYEYLHIRNKEFPWGPDGLFE 94
+ +Y Y+HIR K+FPWG LF+
Sbjct: 69 DQIQYPYMHIRTKDFPWGACSLFD 92
>gi|307102489|gb|EFN50762.1| hypothetical protein CHLNCDRAFT_142490 [Chlorella variabilis]
Length = 98
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 7 GLLQTALRRVSSASSAPPKRGFASSAHHDDAYETA-------KWEKITYLGIATCTVLAF 59
G L+T++ R +S +R A+ A + E A KW+ I++ I C L
Sbjct: 3 GSLRTSVARAGRTASQQVRR-MATDAIAEVEKEAAHAQKEANKWKMISFGCIPVCVGLGA 61
Query: 60 YNLSKGHPHYEEPPRYEYLHIRNKEFPWGPDGLFEKK 96
LS H H+ P Y Y+ + K+FPWGPD LF K
Sbjct: 62 LTLSNAHTHHRHAPNYPYMLYKVKDFPWGPDPLFGYK 98
>gi|302822859|ref|XP_002993085.1| hypothetical protein SELMODRAFT_449005 [Selaginella moellendorffii]
gi|300139085|gb|EFJ05833.1| hypothetical protein SELMODRAFT_449005 [Selaginella moellendorffii]
Length = 795
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 36 DAYETAKWEKITYLGIATCTVLAFYNLSKGHPHYEEPPR-YEYLHIRNKEFPWGPDGLFE 94
D +E +KW+KIT I C FY HP EP + Y Y+++R+K+FPWGPD L +
Sbjct: 731 DLHEISKWKKITLGMIIVCLCDGFY--VYNHPEVHEPRKEYPYMNVRHKDFPWGPDPLLK 788
>gi|145354988|ref|XP_001421755.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581993|gb|ABP00049.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 77
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 39 ETAKWEKITYLGIATCTVLAFYNLSKG-HPHYEEPPRYEYLHIRNKE-FPWGPD-GLFEK 95
E KW ++ L I C Y LS H H E P Y YL IRN+E FPWG D GLFE
Sbjct: 13 EMNKWRAVSMLVIPACAGFGVYTLSNAAHGHGHENPAYSYLRIRNREQFPWGGDCGLFEY 72
Query: 96 KPE 98
+ +
Sbjct: 73 RDD 75
>gi|168041260|ref|XP_001773110.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675657|gb|EDQ62150.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 128
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 35 DDAYETAKWEKITYLGIATCTVLAFYNLS-KGHPHYEEPPRYEYLHIRNKEFPWG 88
DDA ET +W IT + C F S + H H E+ P Y YL IRNK FPWG
Sbjct: 42 DDAEETFQWRNITIAAVMGCMGTVFNTFSGEEHHHPEDRPAYSYLRIRNKAFPWG 96
>gi|409083150|gb|EKM83507.1| OX6A subunit VIa of cytochrome c oxidase [Agaricus bisporus var.
burnettii JB137-S8]
Length = 133
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 36/122 (29%)
Query: 6 SGLLQTALRRVSSASSAPPK-RGFASSAHHDD-----------------AYETAK-WEKI 46
S L +TALR S+ +AP + RGFA + + A ET+ W KI
Sbjct: 2 SALARTALR--SALRTAPRRSRGFAQAVTEAESPAVKAYLQEESALIHHATETSDMWRKI 59
Query: 47 TYL----GIATCTVLAFYNLSKGHPHYE-----------EPPRYEYLHIRNKEFPWGPDG 91
+Y +A CT+ + S+ H E +PP Y++L+ RN+ FPWG +
Sbjct: 60 SYFVCLPAVAVCTIWVYNAESEHMAHLEHMRQENGGELPQPPEYDFLNRRNRPFPWGMNS 119
Query: 92 LF 93
LF
Sbjct: 120 LF 121
>gi|426201798|gb|EKV51721.1| COX6A subunit VIa of cytochrome c oxidase [Agaricus bisporus var.
bisporus H97]
Length = 133
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 36/122 (29%)
Query: 6 SGLLQTALRRVSSASSAPPK-RGFASSAHHDD-----------------AYETAK-WEKI 46
S L +TALR S+ +AP + RGFA + A ET+ W KI
Sbjct: 2 SALARTALR--SALRTAPRRSRGFAQEVTQAESPAVKAYLQEESALIHHATETSDMWRKI 59
Query: 47 TYL----GIATCTVLAFYNLSKGHPHYE-----------EPPRYEYLHIRNKEFPWGPDG 91
+Y +A CT+ + S+ H E +PP Y++L+ RN+ FPWG +
Sbjct: 60 SYFVCLPAVAVCTIWVYNAESEHMAHLEHMRQENGGELPQPPEYDFLNRRNRPFPWGMNS 119
Query: 92 LF 93
LF
Sbjct: 120 LF 121
>gi|302787062|ref|XP_002975301.1| hypothetical protein SELMODRAFT_415475 [Selaginella moellendorffii]
gi|300156875|gb|EFJ23502.1| hypothetical protein SELMODRAFT_415475 [Selaginella moellendorffii]
Length = 769
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 36 DAYETAKWEKITYLGIATCTVLAFYNLSKGHPHYEEPPR-YEYLHIRNKEFPWG 88
D +E +KW+KIT I C FY HP EP + Y Y+++R+K+FPWG
Sbjct: 707 DLHEISKWKKITLGMIIVCLCDGFY--VYNHPEVHEPRKEYPYMNVRHKDFPWG 758
>gi|412985073|emb|CCO20098.1| predicted protein [Bathycoccus prasinos]
Length = 67
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 42 KWEKITYLGIATCTVLAFYNLSKG-HPHYEEPPRYEYLHIRNKE-FPWGPD-GLFE 94
KW +T+L I C Y+ + H H EE P Y YL R++E +PWG D GLFE
Sbjct: 3 KWRTVTFLAIPACAAFGVYSFATAEHGHGEEQPAYSYLKRRSREQWPWGGDLGLFE 58
>gi|209733996|gb|ACI67867.1| Cytochrome c oxidase polypeptide VIa, mitochondrial precursor
[Salmo salar]
Length = 113
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 12/96 (12%)
Query: 3 MVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAK-WEKITYL----GIATCTVL 57
MV G + AL R SS R ++SA H +TA+ W+ ++++ G+A C +
Sbjct: 1 MVSFGRISQALLR----SSMIQTRQLSASAAHSHGEQTARTWKILSFVVALPGVAVCMLN 56
Query: 58 AFYNLSKGHPHYEEPPR--YEYLHIRNKEFPWGPDG 91
+ + + H+ EP Y +L IR+K FPWG DG
Sbjct: 57 MYLKMQQHAAHHVEPEFVPYSHLRIRSKRFPWG-DG 91
>gi|255089186|ref|XP_002506515.1| predicted protein [Micromonas sp. RCC299]
gi|226521787|gb|ACO67773.1| predicted protein [Micromonas sp. RCC299]
Length = 102
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Query: 5 RSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFYNLSK 64
R+ LL A R + + ++ KW +T+L + C L Y S
Sbjct: 4 RATLLNFAKRAAKAPVRVTRRNMSGGGTIEEERAHMEKWRGVTFLAVPGCIGLGVYLFSN 63
Query: 65 GHPHY-EEPPRYEYLHIRNKEFPWGPD-GLFE 94
H H+ E P Y Y+ R K+ PWG D LFE
Sbjct: 64 HHEHHAHEQPAYSYMRRRLKQLPWGGDCALFE 95
>gi|209734560|gb|ACI68149.1| Cytochrome c oxidase polypeptide VIa, mitochondrial precursor
[Salmo salar]
Length = 113
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 3 MVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAK-WEKITYL----GIATCTVL 57
MV G + AL R SS R ++SA H +TA W+ ++++ G+A C +
Sbjct: 1 MVSFGRISQALLR----SSMIQTRQLSASAAHSHGEQTATTWKILSFVVALPGVAVCMLN 56
Query: 58 AFYNLSKGHPHYEEPPR--YEYLHIRNKEFPWGPDG 91
+ + + H+ EP Y +L IR+K FPWG DG
Sbjct: 57 MYLKMQQHAAHHVEPEFVPYSHLRIRSKRFPWG-DG 91
>gi|403158109|ref|XP_003307448.2| hypothetical protein PGTG_00398 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375163683|gb|EFP74442.2| hypothetical protein PGTG_00398 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 127
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 34/66 (51%), Gaps = 15/66 (22%)
Query: 43 WEKITYLGIATCTVLAF---YNLSKGHPHYEE----------PPR--YEYLHIRNKEFPW 87
W KITY VLA YNL+K H H+ E P R Y+YL+IRNK FPW
Sbjct: 52 WRKITYYVAFPSIVLALVNAYNLAKEHEHHLEHIKEENGGELPERIHYDYLNIRNKSFPW 111
Query: 88 GPDGLF 93
G LF
Sbjct: 112 GNYTLF 117
>gi|164422311|gb|ABY55253.1| cytochrome c oxidase subunit VIa polypeptide 1 [Oncorhynchus
masou formosanus]
Length = 136
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 22/97 (22%)
Query: 2 AMVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAK-WEKITYL----GIATCTV 56
A++RS ++QT R ++SA H +TA+ W+ ++++ G+A C +
Sbjct: 10 ALLRSSIIQT--------------RQLSASAAHSHGEQTARTWKILSFVVALPGVAVCML 55
Query: 57 LAFYNLSKGHPHYEEPPR--YEYLHIRNKEFPWGPDG 91
+ + + H+ EP Y +L IR+K FPWG DG
Sbjct: 56 NMYLKMQRHAAHHVEPEFVPYSHLRIRSKRFPWG-DG 91
>gi|321471482|gb|EFX82455.1| hypothetical protein DAPPUDRAFT_302522 [Daphnia pulex]
Length = 111
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 9 LQTALRRVSSASSAPPK--RGFASSAHHDDAYETAKWEKITYL----GIATCTVLAFYNL 62
+ T L +V S A + G A+ + H D ++ W +T+L G+A C + + L
Sbjct: 1 MATVLGKVISRGIATTRVANGQAAVSGHHDGWKI--WRNLTFLVALPGVALCMLNVYLGL 58
Query: 63 SKGHPHYEEP-PRYEYLHIRNKEFPWG 88
H P YEY+ IRNK FPWG
Sbjct: 59 DDVEAHSAPPFVPYEYMRIRNKRFPWG 85
>gi|91088963|ref|XP_974027.1| PREDICTED: similar to CG17280 CG17280-PA [Tribolium castaneum]
gi|270012806|gb|EFA09254.1| hypothetical protein TcasGA2_TC006519 [Tribolium castaneum]
Length = 112
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 41/90 (45%), Gaps = 16/90 (17%)
Query: 8 LLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYL----GIATCTVLAFYNLS 63
LQT+ RR A S H+ Y+ W +T+ IA C V +
Sbjct: 12 FLQTSARRAVQVQGPS-----AVSGGHEGGYKV--WRNMTFFVAFPAIALCAVNCYLAHY 64
Query: 64 KGHPHYEEPP--RYEYLHIRNKEFPWGPDG 91
GH +E PP +YEYL IR K FPWG DG
Sbjct: 65 SGH--HERPPFVKYEYLRIRTKRFPWG-DG 91
>gi|303288003|ref|XP_003063290.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455122|gb|EEH52426.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 67
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Query: 42 KWEKITYLGIATCTVL---AFYNLSKGHPHYEEPPRYEYLHIRNKEFPWGPD-GLFE 94
KW+ ++++ + C L +F N+ HP E P Y YL+IRNK PWG GLFE
Sbjct: 3 KWKGVSFIAMPACVCLGAWSFMNMEHHHP--AERPAYSYLNIRNKIMPWGGKCGLFE 57
>gi|389751538|gb|EIM92611.1| X15341 cytochrome C oxidase subunit [Stereum hirsutum FP-91666 SS1]
Length = 128
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 31/70 (44%), Gaps = 17/70 (24%)
Query: 40 TAKWEKITYL----GIATCTVLAFYNLSKGHP------------HYEEPPRYEYLHIRNK 83
T W KI+Y I CT L N H H +PP Y YL+ RNK
Sbjct: 48 TDLWRKISYFVAVPAIVACT-LWVRNTENDHSEHMDHLRAENDGHLPQPPDYPYLNRRNK 106
Query: 84 EFPWGPDGLF 93
FPWGP+ LF
Sbjct: 107 PFPWGPNSLF 116
>gi|126324377|ref|XP_001376841.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Monodelphis domestica]
Length = 109
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 45/97 (46%), Gaps = 14/97 (14%)
Query: 1 MAMVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYL----GIATCTV 56
MA+ G L L RV APP R A++ H D W+ +T+ G+A +
Sbjct: 1 MAVTAGGRLLAQLGRVR----APPGRMLATTVSHSDHGSGRLWKTLTFFVALPGVAVSML 56
Query: 57 LAFYNLSKGHPHYEEPP--RYEYLHIRNKEFPWGPDG 91
A+ K H+E P Y +L IR K FPWG DG
Sbjct: 57 NAYL---KSKEHHERPSFVPYPHLRIRTKPFPWG-DG 89
>gi|332373668|gb|AEE61975.1| unknown [Dendroctonus ponderosae]
Length = 112
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
Query: 6 SGLLQTALRRV--SSASSAPPKRGF-ASSAHHDDAYETAKWEKITYL----GIATCTVLA 58
+ +L ALRR +SA A G A S H+ Y+ W+K+T+ I C V
Sbjct: 2 AAVLNHALRRFFQTSAQRAVQIEGHSAVSGIHEGGYKP--WKKLTFFVAFPSIILCAVNC 59
Query: 59 F--YNLSKGHPHYEEPPRYEYLHIRNKEFPWGPDG 91
+ + HPH ++ +YEYL IR+K FPWG DG
Sbjct: 60 YMVHQDHAKHPHEKKFVKYEYLAIRSKRFPWG-DG 93
>gi|242002136|ref|XP_002435711.1| cytochrome C oxidase, subunit VIa/COX13, putative [Ixodes
scapularis]
gi|215499047|gb|EEC08541.1| cytochrome C oxidase, subunit VIa/COX13, putative [Ixodes
scapularis]
Length = 111
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 13 LRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYL----GIATCTVLAFYNLSKGHPH 68
LR SS++ K G A SAH W +T+ I C + A+ + H H
Sbjct: 10 LRYFSSSAIRYAKPGEAGSAH---LAAQKMWRNLTFFVAFPAIGLCALNAYLAEKEHHKH 66
Query: 69 YEEP--PRYEYLHIRNKEFPWGPD--GLF 93
+ P +YEYL+IR K FPWG GLF
Sbjct: 67 FHRPEFKKYEYLYIRTKRFPWGDGNHGLF 95
>gi|442753217|gb|JAA68768.1| Putative cytochrome c oxidase subunit via/cox13 [Ixodes ricinus]
Length = 111
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query: 13 LRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYL----GIATCTVLAFYNLSKGHPH 68
LR SS++ K G A +AH W +T+ I C + A+ + H H
Sbjct: 10 LRYFSSSAIRYAKPGEAGNAH---LAAQKMWRNLTFFVAFPAIGLCALNAYLAEQEHHKH 66
Query: 69 YEEP--PRYEYLHIRNKEFPWGPD--GLF 93
+ P +YEYL+IR K+FPWG GLF
Sbjct: 67 FHRPEFKKYEYLYIRTKKFPWGDGNHGLF 95
>gi|194882703|ref|XP_001975450.1| GG20553 [Drosophila erecta]
gi|190658637|gb|EDV55850.1| GG20553 [Drosophila erecta]
Length = 94
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 43 WEKITYLGIATCTVLAFYNLSKGHPHYEEPP--RYEYLHIRNKEFPWGPDG 91
W+++T+L VL N GH H E P +YEYL R K FPWG DG
Sbjct: 20 WKRVTFLLALPAIVLCAANAFSGHKHVEREPFAKYEYLRRRTKRFPWG-DG 69
>gi|195488415|ref|XP_002092306.1| GE11738 [Drosophila yakuba]
gi|194178407|gb|EDW92018.1| GE11738 [Drosophila yakuba]
Length = 94
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 43 WEKITYLGIATCTVLAFYNLSKGHPHYEEPP--RYEYLHIRNKEFPWGPDG 91
W+++T+L VL N GH H E P +YEYL R K FPWG DG
Sbjct: 20 WKRVTFLLALPAIVLCAANAFSGHKHVEREPFAKYEYLRRRTKRFPWG-DG 69
>gi|195583760|ref|XP_002081684.1| GD11145 [Drosophila simulans]
gi|124014148|gb|ABM88324.1| mitochondrial cytochrome c oxidase subunit 6A isoform 3
[Drosophila simulans]
gi|124014150|gb|ABM88325.1| mitochondrial cytochrome c oxidase subunit 6A isoform 3
[Drosophila simulans]
gi|124014154|gb|ABM88327.1| mitochondrial cytochrome c oxidase subunit 6A isoform 3
[Drosophila simulans]
gi|124014156|gb|ABM88328.1| mitochondrial cytochrome c oxidase subunit 6A isoform 3
[Drosophila simulans]
gi|124014158|gb|ABM88329.1| mitochondrial cytochrome c oxidase subunit 6A isoform 3
[Drosophila simulans]
gi|124014160|gb|ABM88330.1| mitochondrial cytochrome c oxidase subunit 6A isoform 3
[Drosophila simulans]
gi|124014162|gb|ABM88331.1| mitochondrial cytochrome c oxidase subunit 6A isoform 3
[Drosophila simulans]
gi|194193693|gb|EDX07269.1| GD11145 [Drosophila simulans]
Length = 94
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 43 WEKITYLGIATCTVLAFYNLSKGHPHYEEPP--RYEYLHIRNKEFPWGPDG 91
W+++T+L VL N GH H E P +YEYL R K FPWG DG
Sbjct: 20 WKRVTFLLALPAIVLCAANAFTGHKHVEREPFAKYEYLRRRTKRFPWG-DG 69
>gi|24653962|ref|NP_725504.1| CG30093 [Drosophila melanogaster]
gi|21645316|gb|AAM70935.1| CG30093 [Drosophila melanogaster]
gi|68051531|gb|AAY85029.1| IP05686p [Drosophila melanogaster]
gi|220951346|gb|ACL88216.1| CG30093-PA [synthetic construct]
Length = 94
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 43 WEKITYLGIATCTVLAFYNLSKGHPHYEEPP--RYEYLHIRNKEFPWGPDG 91
W+++T+L VL N GH H E P +YEYL R K FPWG DG
Sbjct: 20 WKRVTFLLALPAIVLCAANAFTGHKHVEREPFAKYEYLRRRTKRFPWG-DG 69
>gi|124014152|gb|ABM88326.1| mitochondrial cytochrome c oxidase subunit 6A isoform 3
[Drosophila simulans]
Length = 94
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 43 WEKITYLGIATCTVLAFYNLSKGHPHYEEPP--RYEYLHIRNKEFPWGPDG 91
W+++T+L VL N GH H E P +YEYL R K FPWG DG
Sbjct: 20 WKRVTFLLALPAIVLCAANAFTGHKHVEREPFAKYEYLRRRTKRFPWG-DG 69
>gi|6138950|gb|AAF04404.1|AF051370_1 cytochrome c oxidase subunit VIa precursor [Thunnus obesus]
Length = 100
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 11/81 (13%)
Query: 18 SASSAPPKRGFASSAHHDDAYETAKWEKITYL----GIATCTVLAFYNLSKGHPHYEEPP 73
S S+ +R FA+++H W+ ++++ G+ C + A+ KG H EPP
Sbjct: 2 SLSALAARRVFAAASHSSHEGGARTWKILSFVLAAPGVTVCMINAYM---KGQAHSHEPP 58
Query: 74 R---YEYLHIRNKEFPWGPDG 91
Y +L IR K+FPWG DG
Sbjct: 59 EFVPYPHLRIRTKKFPWG-DG 78
>gi|225705586|gb|ACO08639.1| Cytochrome c oxidase polypeptide VIa, mitochondrial precursor
[Oncorhynchus mykiss]
Length = 113
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 13/89 (14%)
Query: 10 QTALRRVSSASSAPPKRGFASSAHHDDAYETAK-WEKITYL----GIATCTVLAFYNLSK 64
QT LR SS R +++A H A +TA+ W+ ++++ G+A C + + +
Sbjct: 9 QTLLR-----SSLIQTRQLSATAAHGHAEQTARTWKILSFVVALPGVAVCMLNMYLKMQH 63
Query: 65 GHPHYEEPPR--YEYLHIRNKEFPWGPDG 91
H+ EP Y +L IR+K FPWG DG
Sbjct: 64 HAAHHVEPEFVPYSHLRIRSKRFPWG-DG 91
>gi|239613862|gb|EEQ90849.1| cytochrome c oxidase subunit VIa [Ajellomyces dermatitidis ER-3]
Length = 155
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 45/112 (40%), Gaps = 18/112 (16%)
Query: 4 VRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAK---WEKITYLGIATCTVLA-- 58
VRSG+LQ P F A+ A W K++ + +LA
Sbjct: 24 VRSGVLQRRFNSTEQKVPTLPDNAFNRERASVKAHAAATSDLWRKLSIYVVVPVVILASV 83
Query: 59 -FYNLSKGH-------PHYEEPPRYEYLHIRNKEFPWGPDG----LFEKKPE 98
YNL H P EE Y Y +IRNK +PWG DG LF K P+
Sbjct: 84 NAYNLWNEHWEHWDHMPPLEERVEYPYQNIRNKNYPWG-DGDKLELFRKLPQ 134
>gi|225705046|gb|ACO08369.1| Cytochrome c oxidase polypeptide VIa, mitochondrial precursor
[Oncorhynchus mykiss]
Length = 161
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 13/89 (14%)
Query: 10 QTALRRVSSASSAPPKRGFASSAHHDDAYETAK-WEKITYL----GIATCTVLAFYNLSK 64
QT LR SS R +++A H A +TA+ W+ ++++ G+A C + + +
Sbjct: 9 QTLLR-----SSLIQTRQLSATAAHGHAEQTARTWKILSFVVALPGVAVCMLNMYLKMQH 63
Query: 65 GHPHYEEPPR--YEYLHIRNKEFPWGPDG 91
H+ EP Y +L IR+K FPWG DG
Sbjct: 64 HAAHHVEPEFVPYSHLRIRSKRFPWG-DG 91
>gi|195334741|ref|XP_002034035.1| GM21645 [Drosophila sechellia]
gi|194126005|gb|EDW48048.1| GM21645 [Drosophila sechellia]
Length = 94
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 43 WEKITYLGIATCTVLAFYNLSKGHPHYEEPP--RYEYLHIRNKEFPWGPDG 91
W+++T+L VL N GH H + P +YEYL R K FPWG DG
Sbjct: 20 WKRVTFLLALPAIVLCAANAFTGHKHVDREPFAKYEYLRRRTKRFPWG-DG 69
>gi|308812666|ref|XP_003083640.1| unnamed protein product [Ostreococcus tauri]
gi|116055521|emb|CAL58189.1| unnamed protein product [Ostreococcus tauri]
Length = 324
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 25 KRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFYNLSKGHPHYEEPPRYEYLHIRNKE 84
+R F +AY + C Y L+ + E P+Y YL IRN+E
Sbjct: 247 RRDFGWPILFMEAYVLFXXXXXXXXAVPACAGFGVYTLANVEHTHNEHPKYSYLRIRNRE 306
Query: 85 -FPWGPD-GLFEKKPEHH 100
FPWG D GLFE + H
Sbjct: 307 QFPWGGDLGLFEYPSKEH 324
>gi|195455757|ref|XP_002074853.1| GK23279 [Drosophila willistoni]
gi|194170938|gb|EDW85839.1| GK23279 [Drosophila willistoni]
Length = 109
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 6 SGLLQTALRRVSSASSAPPKRGFASSA-HHDDAYETAKWEKITYL----GIATCTVLAFY 60
S +L A+RR A+ A G A+ A H Y+ W+++++ + C + A+
Sbjct: 2 SAVLNHAIRRQLVATGARNMSGTAAVAGEHSGGYKV--WKRLSFFVAVPAVGLCMLNAYL 59
Query: 61 NLSKGHPH-YEEPPRYEYLHIRNKEFPWG 88
+ H H +E +YEYL R K FPWG
Sbjct: 60 KHQEEHDHPRQEFVKYEYLRRREKRFPWG 88
>gi|125809378|ref|XP_001361094.1| GA14437 [Drosophila pseudoobscura pseudoobscura]
gi|195154665|ref|XP_002018242.1| GL16869 [Drosophila persimilis]
gi|54636267|gb|EAL25670.1| GA14437 [Drosophila pseudoobscura pseudoobscura]
gi|194114038|gb|EDW36081.1| GL16869 [Drosophila persimilis]
Length = 109
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 6 SGLLQTALRRVSSASSAPPKRGFASSA-HHDDAYETAKWEKITYL----GIATCTVLAFY 60
S +L A+RR A++A G A+ A H Y+ W+++++ + C + A+
Sbjct: 2 SAILNHAIRRQFGATAARNMSGTAAVAGEHSGGYKV--WKRLSFFVAVPAVGLCMLNAYL 59
Query: 61 NLSKGHPH-YEEPPRYEYLHIRNKEFPWG 88
+ H H +E +Y+YL R K FPWG
Sbjct: 60 KHQEEHDHPRQEFVKYDYLRRREKRFPWG 88
>gi|308324401|gb|ADO29335.1| mitochondrial cytochrome c oxidase subunit 6a1 [Ictalurus
punctatus]
Length = 109
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 14/88 (15%)
Query: 10 QTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYL----GIATCTVLAFYNLSKG 65
QT LR VS+ + ++ A++AH + +T W+ +T+L G+ C + F L
Sbjct: 9 QTLLRSVSAVQT---RQLSAAAAHGEQGSKT--WKLLTFLVALPGVGVCMLNTF--LKAQ 61
Query: 66 HPHYEEPPR--YEYLHIRNKEFPWGPDG 91
H +E+P Y +L IR+K FPWG DG
Sbjct: 62 HHSHEQPEFIPYTHLRIRSKRFPWG-DG 88
>gi|209735732|gb|ACI68735.1| Cytochrome c oxidase polypeptide VIa, mitochondrial precursor
[Salmo salar]
gi|223646160|gb|ACN09838.1| Cytochrome c oxidase polypeptide VIa, mitochondrial precursor
[Salmo salar]
gi|223672007|gb|ACN12185.1| Cytochrome c oxidase polypeptide VIa, mitochondrial precursor
[Salmo salar]
Length = 113
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 13/89 (14%)
Query: 10 QTALRRVSSASSAPPKRGFASSAHHDDAYETAK-WEKITYL----GIATCTVLAFYNLSK 64
QT LR SS R +++A H +TA+ W+ ++++ G+A C + + +
Sbjct: 9 QTLLR-----SSLIQTRQLSATAAHGHGEQTARTWKILSFVVALPGVAVCMLNMYLKMQH 63
Query: 65 GHPHYEEPPR--YEYLHIRNKEFPWGPDG 91
H+ EP Y +L IR+K FPWG DG
Sbjct: 64 HAAHHVEPEFVPYSHLRIRSKRFPWG-DG 91
>gi|194756222|ref|XP_001960378.1| GF11548 [Drosophila ananassae]
gi|190621676|gb|EDV37200.1| GF11548 [Drosophila ananassae]
Length = 97
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 43 WEKITYLGIATCTVLAFYNLSKGHPHYEEPP--RYEYLHIRNKEFPWGPDG 91
W K+T+L VL N GH ++ P +YEYL R K FPWG DG
Sbjct: 22 WRKVTFLLAIPAIVLCAVNAFSGHSQHDREPFTKYEYLRRRTKRFPWG-DG 71
>gi|52345674|ref|NP_001004884.1| cytochrome c oxidase subunit VIa polypeptide 2 [Xenopus
(Silurana) tropicalis]
gi|49670632|gb|AAH75281.1| MGC88918 protein [Xenopus (Silurana) tropicalis]
Length = 105
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 25 KRGFASSAHHDDAYETAKWEKITYL----GIATCTVLAFYNLSKGHPHYEEPP--RYEYL 78
+R AS AH + A W+ +++ G+A C + A+ L K H +E P Y++L
Sbjct: 14 RRQMASEAHEEGAKAARTWKILSFTVALPGVAVCMLNAW--LKKQHHPHERPKFVAYDHL 71
Query: 79 HIRNKEFPWGPDG 91
IR K FPWG DG
Sbjct: 72 RIRTKRFPWG-DG 83
>gi|225715662|gb|ACO13677.1| Cytochrome c oxidase polypeptide VIa, mitochondrial precursor
[Esox lucius]
Length = 111
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 3 MVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAK-WEKITYL----GIATCTVL 57
MV G + AL R S + S R + SA H + A+ W+ ++++ G+A C +
Sbjct: 1 MVVFGRISQALLRYSLSQS----RQLSVSAAHGHGEKAARTWKILSFVVALPGVAVCMLN 56
Query: 58 AFYNLSKGHPHYEEPPR--YEYLHIRNKEFPWGPDG 91
+ + + H+ EP Y +L IR+K FPWG DG
Sbjct: 57 MYLKMHEHAAHHVEPEFVPYSHLRIRSKRFPWG-DG 91
>gi|284795350|ref|NP_001087350.2| cytochrome c oxidase subunit 6a polypeptide 1 [Xenopus laevis]
Length = 110
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 17/97 (17%)
Query: 3 MVRSGLLQTALRRVSSASSAPPKRG--FASSAHHDDAYETAKWEKITYL----GIATCTV 56
M G L LRR + P RG F+++A + A W+ ++Y+ G+A C +
Sbjct: 1 MASLGRLSGILRR------SLPIRGRLFSAAAEQEHAGAVRTWKILSYVVALPGVAVCML 54
Query: 57 LAFYNLSKGHPHYEEPPR--YEYLHIRNKEFPWGPDG 91
+ + H +E P YE+L IR K FPWG DG
Sbjct: 55 NVYLKMQ--HHSHENPEFIPYEHLRIRTKRFPWG-DG 88
>gi|288856324|ref|NP_001165814.1| cytochrome c oxidase subunit 6A1, mitochondrial [Nasonia
vitripennis]
Length = 104
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 15/93 (16%)
Query: 2 AMVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFYN 61
++R + Q R S+ P K A + W ++ G+ L F N
Sbjct: 5 VILRRAIAQKLFTRNYSSHGDPQKIQAAYNM----------WRNLSLFGVPVVLTLGFLN 54
Query: 62 LSKGHPHYEEPPR---YEYLHIRNKEFPWGPDG 91
+ H EEPP YE+L IR K FPWG DG
Sbjct: 55 VYLNEEH-EEPPEFIPYEHLRIRTKRFPWG-DG 85
>gi|308485615|ref|XP_003105006.1| CRE-TAG-174 protein [Caenorhabditis remanei]
gi|308257327|gb|EFP01280.1| CRE-TAG-174 protein [Caenorhabditis remanei]
Length = 128
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 34 HDDAYETAKWEKITYLGIATCTVLAFYNLSKGHPHY---EEPPRYEY--LHIRNKEFPWG 88
+ +A ET W+KI Y+ C L Y K H + E P EY L++RNK FPWG
Sbjct: 44 NQNASET--WKKIFYIASIPCLALTMYAAFKDHKKHMSHERPEHVEYAFLNVRNKPFPWG 101
Query: 89 PDG---LFEKKPE 98
DG LF K E
Sbjct: 102 -DGNHSLFHNKAE 113
>gi|341889608|gb|EGT45543.1| hypothetical protein CAEBREN_09745 [Caenorhabditis brenneri]
Length = 129
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 34 HDDAYETAKWEKITYLGIATCTVLAFYNLSKGHPHY---EEPPRYEY--LHIRNKEFPWG 88
+ +A ET W+KI Y+ C L Y K H + E P EY L++RNK FPWG
Sbjct: 44 NQNASET--WKKIFYIASIPCLALTMYAAFKDHKKHMSHERPEHVEYAFLNVRNKPFPWG 101
Query: 89 PDG---LFEKKPE 98
DG LF K E
Sbjct: 102 -DGNHSLFHNKAE 113
>gi|194885378|ref|XP_001976426.1| GG22865 [Drosophila erecta]
gi|190659613|gb|EDV56826.1| GG22865 [Drosophila erecta]
Length = 109
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 6 SGLLQTALRRVSSASSAPPKRGFASSA-HHDDAYETAKWEKITYLGIATCTVLAFYNLSK 64
S +L A+RR A++A G A+ A H Y+ W+++++ L N
Sbjct: 2 SAILNHAIRRQFGATAARNMSGTAAVAGEHSGGYKV--WKRLSFFVAVPAVGLCMLNAYL 59
Query: 65 GHPHYEEPPR-----YEYLHIRNKEFPWG 88
H + PR YEYL R K FPWG
Sbjct: 60 KHQEEHDKPRQEFVKYEYLRRREKRFPWG 88
>gi|20130301|ref|NP_611805.1| levy [Drosophila melanogaster]
gi|7291601|gb|AAF47024.1| levy [Drosophila melanogaster]
gi|17944459|gb|AAL48119.1| RH03295p [Drosophila melanogaster]
gi|220949164|gb|ACL87125.1| levy-PA [synthetic construct]
gi|220958324|gb|ACL91705.1| levy-PA [synthetic construct]
Length = 109
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 6 SGLLQTALRRVSSASSAPPKRGFASSA-HHDDAYETAKWEKITYLGIATCTVLAFYNLSK 64
S +L A+RR AS+A G A+ A H Y+ W+++++ L N
Sbjct: 2 SAILNHAIRRQFGASAARNMSGTAAVAGEHSGGYKV--WKRLSFFVAVPAVGLCMLNAYL 59
Query: 65 GHPHYEEPPR-----YEYLHIRNKEFPWG 88
H + PR Y+YL R K FPWG
Sbjct: 60 KHQEEHDKPRQEFVKYDYLRRREKRFPWG 88
>gi|147906308|ref|NP_001091288.1| cytochrome c oxidase subunit VIa polypeptide 2 [Xenopus laevis]
gi|123959674|gb|AAI28947.1| LOC100037102 protein [Xenopus laevis]
Length = 105
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 25 KRGFASSAHHDDAYETAKWEKITYL----GIATCTVLAFYNLSKGHPHYEEPP--RYEYL 78
+R AS AH + A W+ ++++ G+A C + A+ N K H E P Y++L
Sbjct: 14 RREMASEAHGEGARAARTWKILSFVVALPGVAVCMLNAWLN--KEHHPQERPTFLAYDHL 71
Query: 79 HIRNKEFPWGPDG 91
IR K FPWG DG
Sbjct: 72 RIRTKRFPWG-DG 83
>gi|195026046|ref|XP_001986169.1| GH21206 [Drosophila grimshawi]
gi|193902169|gb|EDW01036.1| GH21206 [Drosophila grimshawi]
Length = 109
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 6 SGLLQTALRRVSSASSAPPKRGFASSA-HHDDAYETAKWEKITYL----GIATCTVLAFY 60
S +L A+RR ++A G A+ A H Y+ W+++++ + C + A+
Sbjct: 2 SFVLNNAIRRQIGTTAARNMSGTAAVAGEHSGGYKV--WKRLSFFVAVPAVGLCMLNAYL 59
Query: 61 NLSKGHPH-YEEPPRYEYLHIRNKEFPWG 88
+ H H +E +YEYL R K FPWG
Sbjct: 60 KHQEEHGHPRQEFVKYEYLRRREKRFPWG 88
>gi|308322101|gb|ADO28188.1| mitochondrial cytochrome c oxidase subunit 6a1 [Ictalurus
furcatus]
Length = 109
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 16/89 (17%)
Query: 10 QTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYL----GIATCTVLAFYNLSKG 65
QT LR VS+ + ++ A++AH + +T W+ +T+L G+ C + F K
Sbjct: 9 QTLLRSVSAVQT---RQLSAAAAHGEQGSKT--WKLLTFLVALPGVGVCMLNTFL---KA 60
Query: 66 HPHYEEPPR---YEYLHIRNKEFPWGPDG 91
H E P Y +L IR+K FPWG DG
Sbjct: 61 QHHSHERPEFIPYTHLRIRSKRFPWG-DG 88
>gi|401881010|gb|EJT45316.1| cytochrome C oxidase subunit [Trichosporon asahii var. asahii CBS
2479]
gi|406697121|gb|EKD00389.1| cytochrome C oxidase subunit [Trichosporon asahii var. asahii CBS
8904]
Length = 126
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 17/80 (21%)
Query: 29 ASSAHHDDAYETAKWEKITY-LGIATCTVLAF--YNLSKGHPHYEE------------PP 73
A++AH E W+KI++ + I C + Y L H H+ + PP
Sbjct: 36 ATAAHAKQTTEL--WKKISFFVCIPACIAGGWWTYKLEADHEHHLDHIREENGGHLPAPP 93
Query: 74 RYEYLHIRNKEFPWGPDGLF 93
YEYL+IR K FPWG LF
Sbjct: 94 AYEYLNIRTKPFPWGMQSLF 113
>gi|195384171|ref|XP_002050791.1| GJ22345 [Drosophila virilis]
gi|194145588|gb|EDW61984.1| GJ22345 [Drosophila virilis]
Length = 109
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 6 SGLLQTALRRVSSASSAPPKRGFASSA-HHDDAYETAKWEKITYL----GIATCTVLAFY 60
S +L A+RR S +A G A+ A H Y+ W+++++ + C + A+
Sbjct: 2 SYVLNNAIRRQISGIAARNMSGTAAVAGEHSGGYKV--WKRLSFFVAMPAVGLCMLNAYL 59
Query: 61 NLSKGHPH-YEEPPRYEYLHIRNKEFPWG 88
+ H H +E +Y+YL R K FPWG
Sbjct: 60 KHQEEHDHPRQEFVKYDYLRRREKRFPWG 88
>gi|225711478|gb|ACO11585.1| Cytochrome c oxidase polypeptide VIa-liver [Caligus
rogercresseyi]
Length = 102
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 1 MAMVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFY 60
M L +A+RR +SA+SA +H D A W+K+ +L
Sbjct: 1 MVTSLRSLSTSAVRRFASAASA--------ESHGDSA---GFWKKVFIFAGIPAILLGHV 49
Query: 61 N---LSKGHPHYEEPPRYEYLHIRNKEFPWGPDG 91
N L +GH H E Y YL IR K FPWG DG
Sbjct: 50 NAFVLPEGHGHRPEFKPYPYLRIRKKAFPWG-DG 82
>gi|324521446|gb|ADY47857.1| Cytochrome c oxidase subunit 6A [Ascaris suum]
Length = 132
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 49/120 (40%), Gaps = 21/120 (17%)
Query: 1 MAMVRSGLLQTALRRVSSASSAPPKRGFASSAHHDD-------AYETAK-----WEKITY 48
M++ S R V+ + GF SS + D +TA+ W+KI +
Sbjct: 1 MSLSASQRFALTARTVAIRAQRSSSGGFYSSHNFDQFGKGLNQQLKTAEATKQTWKKIFF 60
Query: 49 LGIATCTVLAFYNLSKGHPHYEEPPR-----YEYLHIRNKEFPWGPDG---LFEKKPEHH 100
C L Y H + PR Y YL++RNK FPWG DG LF K E +
Sbjct: 61 WCSIPCLALTMYAAYADHQKHRSKPRPEYVEYPYLNVRNKPFPWG-DGNHTLFHNKKEQY 119
>gi|268576208|ref|XP_002643084.1| C. briggsae CBR-TAG-174 protein [Caenorhabditis briggsae]
Length = 128
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 32/64 (50%), Gaps = 9/64 (14%)
Query: 43 WEKITYLGIATCTVLAFYNLSKGHPHY---EEPPRYEY--LHIRNKEFPWGPDG---LFE 94
W+KI Y+ C L Y K H + E P EY L++RNK FPWG DG LF
Sbjct: 51 WKKIFYIASIPCLALTMYAAFKDHKKHMSHERPEHVEYAFLNVRNKPFPWG-DGNHSLFH 109
Query: 95 KKPE 98
K E
Sbjct: 110 NKAE 113
>gi|312076152|ref|XP_003140733.1| cytochrome c oxidase subunit VIa family protein [Loa loa]
gi|307764107|gb|EFO23341.1| cytochrome c oxidase subunit VIa family protein [Loa loa]
Length = 136
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 27/127 (21%)
Query: 1 MAMVRSGLLQTALRRVSSASSAPPKRGFASSAHHD---DAYETAKWEK----ITYLGIAT 53
++ RS L +T L++ + A S R S+A++D D + K++K + G
Sbjct: 9 FSVTRSQLSRTRLKQTTKAISTSQVRHTQSAANYDEEADDRDRFKYDKFYNAVVMFGSPV 68
Query: 54 CTVLAFYNLSKGHP---HYEEPP--RYEYLHIRNKEFPWG---------------PDGLF 93
+ FY GH H+++ Y YL +RNK PWG P F
Sbjct: 69 VLAILFYVTYLGHQMEEHFDQEKYVHYPYLTVRNKPLPWGDGNHALFHNPEKNYVPGVGF 128
Query: 94 EKKPEHH 100
EKK E H
Sbjct: 129 EKKQEKH 135
>gi|327282644|ref|XP_003226052.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Anolis carolinensis]
Length = 144
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 2 AMVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYL----GIATCTVL 57
AM S L + + + + A A +R +++A H + W+ ++++ G+A C +
Sbjct: 32 AMAASALGKLSRQVAAPAPQAGLRRFLSATAGHGEGGSARTWKILSFVVALPGVAVCMLN 91
Query: 58 AFYNLSKGHPHYEEPPRYEYLHIRNKEFPWGPDG 91
+ H E P Y +L IR K FPWG DG
Sbjct: 92 CYLKAQHEHERPEFIP-YSHLRIRTKPFPWG-DG 123
>gi|195552203|ref|XP_002076395.1| GD15452 [Drosophila simulans]
gi|124014116|gb|ABM88308.1| mitochondrial cytochrome c oxidase subunit 6A isoform 1
[Drosophila simulans]
gi|124014118|gb|ABM88309.1| mitochondrial cytochrome c oxidase subunit 6A isoform 1
[Drosophila simulans]
gi|124014120|gb|ABM88310.1| mitochondrial cytochrome c oxidase subunit 6A isoform 1
[Drosophila simulans]
gi|124014122|gb|ABM88311.1| mitochondrial cytochrome c oxidase subunit 6A isoform 1
[Drosophila simulans]
gi|124014124|gb|ABM88312.1| mitochondrial cytochrome c oxidase subunit 6A isoform 1
[Drosophila simulans]
gi|124014126|gb|ABM88313.1| mitochondrial cytochrome c oxidase subunit 6A isoform 1
[Drosophila simulans]
gi|124014128|gb|ABM88314.1| mitochondrial cytochrome c oxidase subunit 6A isoform 1
[Drosophila simulans]
gi|124014130|gb|ABM88315.1| mitochondrial cytochrome c oxidase subunit 6A isoform 1
[Drosophila simulans]
gi|194202044|gb|EDX15620.1| GD15452 [Drosophila simulans]
Length = 109
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 6 SGLLQTALRRVSSASSAPPKRGFASSA-HHDDAYETAKWEKITYLGIATCTVLAFYNLSK 64
S +L A+RR A++A G A+ A H Y+ W+++++ L N
Sbjct: 2 SAILNHAIRRQFGATAARNMSGTAAVAGEHSGGYKV--WKRLSFFVAVPAVGLCMLNAYL 59
Query: 65 GHPHYEEPPR-----YEYLHIRNKEFPWG 88
H + PR Y+YL R K FPWG
Sbjct: 60 KHQEEHDKPRQEFVKYDYLRRREKRFPWG 88
>gi|195347126|ref|XP_002040105.1| GM16024 [Drosophila sechellia]
gi|194135454|gb|EDW56970.1| GM16024 [Drosophila sechellia]
Length = 109
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 6 SGLLQTALRRVSSASSAPPKRGFASSA-HHDDAYETAKWEKITYLGIATCTVLAFYNLSK 64
S +L A+RR A++A G A+ A H Y+ W+++++ L N
Sbjct: 2 SAILNHAIRRQFGATAARNMSGTAAVAGEHSGGYKV--WKRLSFFVAVPAVGLCMLNAYL 59
Query: 65 GHPHYEEPPR-----YEYLHIRNKEFPWG 88
H + PR Y+YL R K FPWG
Sbjct: 60 KHQEEHDKPRQEFVKYDYLRRREKRFPWG 88
>gi|53933242|ref|NP_001005592.1| cytochrome c oxidase subunit 6A1, mitochondrial [Danio rerio]
gi|51980454|gb|AAH81530.1| Cytochrome c oxidase subunit VIa polypeptide 1 [Danio rerio]
gi|182889330|gb|AAI64950.1| Cox6a1 protein [Danio rerio]
Length = 108
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 8/82 (9%)
Query: 14 RRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYL----GIATCTVLAFYNLSKGHPHY 69
+++ +++ R +++AH ++A +T W+ +T++ G+A C +L Y S+ H
Sbjct: 9 QKLFKSAALTQSRQLSAAAHGENAAKT--WKILTFVVALPGVAVC-MLNMYLRSQHHHEQ 65
Query: 70 EEPPRYEYLHIRNKEFPWGPDG 91
E Y +L IR+K FPWG DG
Sbjct: 66 PEFVPYSHLRIRSKRFPWG-DG 86
>gi|195489200|ref|XP_002092636.1| GE14301 [Drosophila yakuba]
gi|38048357|gb|AAR10081.1| similar to Drosophila melanogaster CG17280, partial [Drosophila
yakuba]
gi|194178737|gb|EDW92348.1| GE14301 [Drosophila yakuba]
Length = 109
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 6 SGLLQTALRRVSSASSAPPKRGFASSA-HHDDAYETAKWEKITYLGIATCTVLAFYNLSK 64
S +L A+RR A++A G A+ A H Y+ W+++++ L N
Sbjct: 2 SAILNHAIRRQFGATAARNMSGTAAVAGEHSGGYKV--WKRLSFFVAVPAVGLCMLNAYL 59
Query: 65 GHPHYEEPPR-----YEYLHIRNKEFPWG 88
H + PR Y+YL R K FPWG
Sbjct: 60 KHQEEHDKPRQEFVKYDYLRRREKRFPWG 88
>gi|62858031|ref|NP_001016543.1| cytochrome c oxidase subunit 6a polypeptide 1 [Xenopus (Silurana)
tropicalis]
gi|89271881|emb|CAJ83526.1| cytochrome c oxidase subunit VIa polypeptide 1 [Xenopus
(Silurana) tropicalis]
gi|171847245|gb|AAI61502.1| cytochrome c oxidase subunit 6a polypeptide 1 [Xenopus (Silurana)
tropicalis]
Length = 111
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 13/92 (14%)
Query: 10 QTALRRVSSA-SSAPPKRG---FASSAHHDDAYETAKWEKITYL----GIATCTVLAFYN 61
AL R+S + P RG A+++ + A W+ +TY+ G+A C + A+
Sbjct: 1 MAALGRLSGILRGSLPSRGRLFSAAASEQEHAGAVRTWKILTYVVALPGVAVCMLNAYLK 60
Query: 62 LSKGHPHYEEPPR--YEYLHIRNKEFPWGPDG 91
+ H +E P YE+L IR K+FPWG DG
Sbjct: 61 MQ--HHSHENPEFIPYEHLRIRTKKFPWG-DG 89
>gi|157135376|ref|XP_001656628.1| cytochrome c oxidase, subunit VIA, putative [Aedes aegypti]
gi|94468508|gb|ABF18103.1| cytochrome c oxidase subunit VIa/COX13 [Aedes aegypti]
gi|108881257|gb|EAT45482.1| AAEL003234-PA [Aedes aegypti]
Length = 109
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 1 MAMVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYL----GIATCTV 56
M++V LL+ + + + P A + H Y+T W+K+++ + C +
Sbjct: 1 MSLVNHVLLRAISQSAARNAVTGPS---AVAGHGGGGYKT--WKKLSFFVALPAVGLCML 55
Query: 57 LAFYNLSK--GHPHYEEPPRYEYLHIRNKEFPWG 88
A+ + GHP E P YE++ IRNK FPWG
Sbjct: 56 NAYLKHQEHHGHPRPEFIP-YEHMRIRNKRFPWG 88
>gi|390604723|gb|EIN14114.1| mitochondrial cytochrome c oxidase subunit VIa [Punctularia
strigosozonata HHB-11173 SS5]
Length = 112
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 37/87 (42%), Gaps = 19/87 (21%)
Query: 23 PPKRGFASSAHHDDAYETAKWEKITYL----GIATCTVLAFYNLSKGHPHYE-------- 70
P RG A+ + E W KI+Y I C+ YNL H +
Sbjct: 14 PRTRGVATDSVAAKTSEL--WRKISYYVCLPSIIVCSAWV-YNLEADHEEHNRHLMEENG 70
Query: 71 ----EPPRYEYLHIRNKEFPWGPDGLF 93
EPP YEYL+ R K +PWG + LF
Sbjct: 71 GKLPEPPAYEYLNRRVKPYPWGMNSLF 97
>gi|327349956|gb|EGE78813.1| cytochrome c oxidase subunit VIa [Ajellomyces dermatitidis ATCC
18188]
Length = 155
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 46/112 (41%), Gaps = 18/112 (16%)
Query: 4 VRSGLLQTALRRVSSASSAPPKRGFA---SSAHHDDAYETAKWEKITYLGIATCTVLA-- 58
VRSG+LQ P F ++ A + W K++ + +LA
Sbjct: 24 VRSGVLQRRFNSTEQKVPTLPDNAFNRERAAVKAHAAATSDLWRKLSIYVVVPVVILASV 83
Query: 59 -FYNLSKGH-------PHYEEPPRYEYLHIRNKEFPWGPDG----LFEKKPE 98
YNL H P EE Y Y +IRNK +PWG DG LF K P+
Sbjct: 84 NAYNLWNEHWEHWDHMPPLEERVEYPYQNIRNKNYPWG-DGDKLELFRKLPQ 134
>gi|345565932|gb|EGX48879.1| hypothetical protein AOL_s00079g100 [Arthrobotrys oligospora ATCC
24927]
Length = 127
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 44/94 (46%), Gaps = 15/94 (15%)
Query: 10 QTALRR--VSSASSAPPKRGFASSAHHDDAYETAKWEKIT-YLGIATCTVLAF--YNLSK 64
Q LRR S A S K A AH + E W K++ Y+ I + + YNL
Sbjct: 20 QILLRRNYASQAGSTFTKEREAVKAHAAQSSEL--WRKLSLYVAIPALILSSINAYNLWN 77
Query: 65 GH-------PHYEEPPRYEYLHIRNKEFPWGPDG 91
H P EE P+Y YL+IR K FPWG DG
Sbjct: 78 EHWEHESHLPPQEERPQYPYLNIRVKRFPWG-DG 110
>gi|209736562|gb|ACI69150.1| Cytochrome c oxidase polypeptide VIa, mitochondrial precursor
[Salmo salar]
gi|223646496|gb|ACN10006.1| Cytochrome c oxidase polypeptide VIa, mitochondrial precursor
[Salmo salar]
gi|223646996|gb|ACN10256.1| Cytochrome c oxidase polypeptide VIa, mitochondrial precursor
[Salmo salar]
gi|223672343|gb|ACN12353.1| Cytochrome c oxidase polypeptide VIa, mitochondrial precursor
[Salmo salar]
gi|223672861|gb|ACN12612.1| Cytochrome c oxidase polypeptide VIa, mitochondrial precursor
[Salmo salar]
Length = 102
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 16 VSSASSAPPKRGFASSAHHDDAYETAK-WEKITYL----GIATCTVLAFYNLSKGHPHYE 70
++S +S +R FA+++H +A+ W+ ++++ G+A C A+ + + H
Sbjct: 1 MASPASMATRRLFAAASHAGHEGGSARTWKILSFVLALPGVAVCIANAYMKMQQ---HSH 57
Query: 71 EPPR---YEYLHIRNKEFPWGPDG 91
EPP Y +L IR K++PWG DG
Sbjct: 58 EPPEFVAYSHLRIRTKKWPWG-DG 80
>gi|403276822|ref|XP_003930082.1| PREDICTED: cytochrome c oxidase subunit 6A2, mitochondrial-like
[Saimiri boliviensis boliviensis]
Length = 96
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 23 PPKRGFASSAHHDDAYETAKWEKITYL----GIATCTVLAFYNLSKGHPHYEEPPRYEYL 78
P RG AS+A W +T++ +A CT+ A+ L GH E Y +L
Sbjct: 7 PLSRGLASAAKEGHGGAGRTWRLLTFVLALPSVALCTLNAY--LHSGHRPRPEFIAYPHL 64
Query: 79 HIRNKEFPWGPDG 91
IR K FPWG DG
Sbjct: 65 RIRTKRFPWG-DG 76
>gi|47217580|emb|CAG02507.1| unnamed protein product [Tetraodon nigroviridis]
Length = 108
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 14/96 (14%)
Query: 3 MVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYL----GIATCTVLA 58
M G L L R + S +R F+++A + W+ ++++ G+A C +
Sbjct: 1 MAAVGQLARVLLRSAVTQS---RRQFSAAAAEHGEHSAKTWKILSFVVALPGVAVCMLNT 57
Query: 59 FYNLSKGHPHYEEPPR---YEYLHIRNKEFPWGPDG 91
F K H E P Y +L IR+K FPWG DG
Sbjct: 58 FL---KEQSHSHEQPEFVPYSHLRIRSKRFPWG-DG 89
>gi|392579586|gb|EIW72713.1| hypothetical protein TREMEDRAFT_24629 [Tremella mesenterica DSM
1558]
Length = 122
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 16/102 (15%)
Query: 8 LLQTALRRVSSASSAPPKRGFAS--SAHHDDAYETAK-WEKITYL----GIATCTVLAFY 60
L +T+++R + ++A + F + +A + A +T + W KI++ GIA T+ +
Sbjct: 8 LARTSMKRTMATAAASGENEFVAKRAAVREHAAQTTELWRKISFYVCIPGIAVATLWTWK 67
Query: 61 NLS---------KGHPHYEEPPRYEYLHIRNKEFPWGPDGLF 93
S K H E Y Y+++R K FPWG LF
Sbjct: 68 AESAHAEHKAHAKAEGHEHERVVYSYMNVRTKPFPWGNQSLF 109
>gi|302405182|ref|XP_003000428.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261361085|gb|EEY23513.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 592
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 13/82 (15%)
Query: 9 LQTALRRVSSASSAPPKRGFASSA---HHDDAYETAKWEKITYLGIATCTVLAFYNLSKG 65
LQ AL R+ + SSA P R S A H D + A W ++ A + FYN
Sbjct: 156 LQEALLRLRARSSAQPLRSLVSYAFIAHQDIGWRGAYWYLFSFHCFAFLMLFFFYN---- 211
Query: 66 HPHYEEPPRYEYLHIRNKEFPW 87
PP +E H + E W
Sbjct: 212 ------PPDFEMKHREDGETKW 227
>gi|195029629|ref|XP_001987674.1| GH22053 [Drosophila grimshawi]
gi|193903674|gb|EDW02541.1| GH22053 [Drosophila grimshawi]
Length = 103
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 43 WEKITYL----GIATCTVLAFYNLSKGHPHYEEPPRYEYLHIRNKEFPWG 88
W+++T+L +A C + A+ G E +YE+L RNK FPWG
Sbjct: 33 WKRVTFLVATPAVALCMINAYNTKQDGEKAREPFVKYEHLRRRNKRFPWG 82
>gi|110671416|gb|ABG81959.1| putative mitochondrial cytochrome oxidase subunit VIa [Diaphorina
citri]
Length = 105
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 18/100 (18%)
Query: 6 SGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFYNLSKG 65
S L Q +R+ S++ + S+A + DA + W +TY G C L +
Sbjct: 3 SRLGQMMMRKFSTSPA------MKSAAGNPDAVKL--WRNLTYFGALPCCALVGVYVYLE 54
Query: 66 HPHYEE---PPRY---EYLHIRNKEFPWGPDG---LFEKK 96
H EE P + EYL+IRN+ FPWG DG LF K
Sbjct: 55 HQAEEEHHVRPEFVKREYLYIRNRRFPWG-DGNHSLFHNK 93
>gi|17553574|ref|NP_498082.1| Protein TAG-174 [Caenorhabditis elegans]
gi|2493854|sp|Q20779.1|COX6A_CAEEL RecName: Full=Probable cytochrome c oxidase subunit 6A,
mitochondrial; AltName: Full=Cytochrome c oxidase
polypeptide VIa; Flags: Precursor
gi|351059826|emb|CCD67407.1| Protein TAG-174 [Caenorhabditis elegans]
Length = 128
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 36 DAYETAKWEKITYLGIATCTVLAFYNLSKGHPHY---EEPPRYEY--LHIRNKEFPW--G 88
+A ET W+KI ++ C L Y K H + E P EY L++RNK FPW G
Sbjct: 46 NASET--WKKIFFIASIPCLALTMYAAFKDHKKHMSHERPEHVEYAFLNVRNKPFPWSDG 103
Query: 89 PDGLFEKKPEH 99
LF K E
Sbjct: 104 NHSLFHNKAEQ 114
>gi|322696796|gb|EFY88583.1| cytochrome c oxidase subunit VIa, putative [Metarhizium acridum
CQMa 102]
Length = 129
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 23/111 (20%)
Query: 3 MVRSGLLQTALRRVSSASSAPPKRGFASSAHHDD-----------AYETAK-WEKITYLG 50
M+ S L+ R ++ AP +R AS++ ++ A ET + W+KI+ G
Sbjct: 1 MLASRLVTRNASRFATQLRAPAQRRLASTSAENEFIKERQHIKEHAKETTELWKKISIYG 60
Query: 51 IATCTVLAFYN---LSKGH-------PHYEEPPRYEYLHIRNKEFPWGPDG 91
+ C LA N L K H P EE Y Y +IR K + WG DG
Sbjct: 61 VIPCLALAGANAWYLWKEHWEHWSHMPPLEERTEYPYQNIRTKNYQWG-DG 110
>gi|195121986|ref|XP_002005493.1| GI20495 [Drosophila mojavensis]
gi|193910561|gb|EDW09428.1| GI20495 [Drosophila mojavensis]
Length = 109
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 6 SGLLQTALRRVSSASSAPPKRGFASSA-HHDDAYETAKWEKITYL----GIATCTVLAFY 60
S +L A+RR +A G A+ A H Y+ W+++++ + C + A+
Sbjct: 2 SFVLNNAIRRQIGVIAARNMSGTAAVAGEHSGGYKV--WKRLSFFVAMPAVGLCMLNAYL 59
Query: 61 NLSKGHPH-YEEPPRYEYLHIRNKEFPWG 88
+ H H E +YEYL R K FPWG
Sbjct: 60 KHQEEHDHPRPEFVKYEYLRRREKRFPWG 88
>gi|346466541|gb|AEO33115.1| hypothetical protein [Amblyomma maculatum]
Length = 129
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 43 WEKITYL----GIATCTVLAFYNLSKGHPHYEEPPR--YEYLHIRNKEFPWGPDG 91
W+++TY IA C + + + HY P YEYLH+R+K +PWG DG
Sbjct: 57 WKRLTYFVAFPAIALCGINVYLAEKEHAKHYHRPEYRPYEYLHVRSKRYPWG-DG 110
>gi|393248120|gb|EJD55627.1| mitochondrial cytochrome c oxidase subunit VIa [Auricularia
delicata TFB-10046 SS5]
Length = 134
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 15/79 (18%)
Query: 30 SSAHHDDAYETAKWEKITYLGIA--TCTVLAFY-NLSKGHPHY----------EEPPR-- 74
S+ H A T W KI++ + T TV+A+ N+ H + E PP+
Sbjct: 43 SAVTHHAAQTTDLWRKISFYVMLPLTVTVIAYVRNVEAEHEAHIEHLKHENGGELPPKPA 102
Query: 75 YEYLHIRNKEFPWGPDGLF 93
Y YL+ R K FPWGP+ LF
Sbjct: 103 YPYLNRRAKPFPWGPNSLF 121
>gi|402217738|gb|EJT97817.1| mitochondrial cytochrome c oxidase subunit VIa [Dacryopinax sp.
DJM-731 SS1]
Length = 133
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 46/114 (40%), Gaps = 23/114 (20%)
Query: 3 MVRSGLLQTALRRVSSASSAPPKRGFASSAHHDD-------AYETAK-WEKITYLGIATC 54
+ R+ L RR ++A P S +D A +T K W I+YL
Sbjct: 7 LARTPLRAPLARRFATAELDPVHHAGVKSKFLEDREAVRHHAEQTTKLWRNISYLVCIPA 66
Query: 55 TVLAFYNLSKGHPHYE---------------EPPRYEYLHIRNKEFPWGPDGLF 93
V ++ + + +E E P YEYL+IR + FPWG + LF
Sbjct: 67 IVGGYFWVMRVEGEHEAHQAHLREENGGHLPEKPHYEYLNIRRRAFPWGNNSLF 120
>gi|255945067|ref|XP_002563301.1| Pc20g07780 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588036|emb|CAP86107.1| Pc20g07780 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 140
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 42/98 (42%), Gaps = 19/98 (19%)
Query: 11 TALRRVSSASSAPP-------KRGFASSAHHDDAYETAKWEKITYLGIATCTV---LAFY 60
T RR +SA + P R A+ HH A + W K++ + C + L Y
Sbjct: 26 TIQRRFNSAEAKPSWIVDNEFNRERAAVKHHA-ASTSDLWRKLSIFAVIPCLIGGGLNAY 84
Query: 61 NLSKGH-------PHYEEPPRYEYLHIRNKEFPWGPDG 91
NL H P EE Y Y +IR K FPWG DG
Sbjct: 85 NLWSEHWEHWEHMPPLEERTEYPYQNIRVKNFPWG-DG 121
>gi|296233354|ref|XP_002761982.1| PREDICTED: cytochrome c oxidase subunit 6A2, mitochondrial
[Callithrix jacchus]
Length = 97
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Query: 23 PPKRGFASSAHHDDAYETAK-WEKITYL----GIATCTVLAFYNLSKGHPHYEEPPRYEY 77
P RG AS+A A+ W +T++ +A CT+ A+ L GH E Y +
Sbjct: 7 PLSRGLASAAKEGHGGTGARTWRLLTFVLALPSVALCTLNAY--LHSGHRPRPEFIAYPH 64
Query: 78 LHIRNKEFPWGPDG 91
L IR K FPWG DG
Sbjct: 65 LRIRTKRFPWG-DG 77
>gi|195436332|ref|XP_002066122.1| GK22192 [Drosophila willistoni]
gi|194162207|gb|EDW77108.1| GK22192 [Drosophila willistoni]
Length = 96
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 17/75 (22%)
Query: 25 KRGFASSAHHDDAYETAKWEKITYL----GIATCTVLAFYNLSKGHPHYEEPP----RYE 76
KR A + H++ + W+K+T++ I C V AF PH E P +YE
Sbjct: 11 KRHLAKAQDHNN---SNMWKKLTFMVATPAICLCMVNAFVV-----PHKEVEPEPFVKYE 62
Query: 77 YLHIRNKEFPWGPDG 91
+L R K FPWG DG
Sbjct: 63 HLRRRTKRFPWG-DG 76
>gi|194755104|ref|XP_001959832.1| GF13063 [Drosophila ananassae]
gi|190621130|gb|EDV36654.1| GF13063 [Drosophila ananassae]
Length = 109
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 6 SGLLQTALRRVSSASSAPPKRGFASSA-HHDDAYETAKWEKITYLGIATCTVLAFYNLSK 64
S +L ++RR A++A G A+ A H Y+ W+++++ L N
Sbjct: 2 SAVLNYSIRRHLGATAARNMSGTAAVAGEHSGGYKV--WKRLSFFVAVPAVGLCMLNAYL 59
Query: 65 GHPHYEEPPR-----YEYLHIRNKEFPWG 88
H + PR Y+YL R K FPWG
Sbjct: 60 KHQEEHDKPRQEFVKYDYLRRREKRFPWG 88
>gi|348516198|ref|XP_003445626.1| PREDICTED: cytochrome c oxidase subunit 6A, mitochondrial-like
[Oreochromis niloticus]
Length = 110
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 22/96 (22%)
Query: 2 AMVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYL----GIATCTVL 57
++RS L QT RR SA++A H + + +T W+ +T++ G+ C +
Sbjct: 10 VLLRSSLTQT--RRQLSAAAA---------GHGEQSGKT--WKILTFVVALPGVGVCMLN 56
Query: 58 AFYNLSKGHPHYEEPPR--YEYLHIRNKEFPWGPDG 91
F L + H +E+P Y +L IR+K FPWG DG
Sbjct: 57 TF--LKEQHHSHEQPEFVPYTHLRIRSKRFPWG-DG 89
>gi|62952898|gb|AAY23172.1| cytochrome c oxidase polypeptide VIa [Penicillium chrysogenum]
Length = 134
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 42/98 (42%), Gaps = 19/98 (19%)
Query: 11 TALRRVSSASSAPP-------KRGFASSAHHDDAYETAKWEKITYLGIATCTV---LAFY 60
T RR +SA + P R A+ HH A + W K++ + C + L Y
Sbjct: 20 TIQRRFNSAEAKPSWIVDNEFNRERAAVKHHA-ASTSDLWRKLSIFAVIPCLIGGGLNAY 78
Query: 61 NLSKGH-------PHYEEPPRYEYLHIRNKEFPWGPDG 91
NL H P EE Y Y +IR K FPWG DG
Sbjct: 79 NLWSEHWEHWEHMPPLEERTEYPYQNIRVKNFPWG-DG 115
>gi|209731472|gb|ACI66605.1| Cytochrome c oxidase polypeptide VIa, mitochondrial precursor
[Salmo salar]
gi|209735242|gb|ACI68490.1| Cytochrome c oxidase polypeptide VIa, mitochondrial precursor
[Salmo salar]
Length = 102
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 12/84 (14%)
Query: 16 VSSASSAPPKRGFASSAHHDDAYETAK-WEKITYL----GIATCTVLAFYNLSKGHPHYE 70
++S +S +R A+++H +A+ W+ ++++ G+A C A+ + + H
Sbjct: 1 MASPASMAARRVLAAASHAGHEGGSARTWKILSFVLALPGVAVCIANAYMKMQQ---HSH 57
Query: 71 EPPR---YEYLHIRNKEFPWGPDG 91
EPP Y +L IR K++PWG DG
Sbjct: 58 EPPEFVAYSHLRIRTKKWPWG-DG 80
>gi|295663070|ref|XP_002792088.1| hypothetical protein PAAG_05876 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|67044149|gb|AAY64184.1| Cox13p [Paracoccidioides brasiliensis]
gi|226279263|gb|EEH34829.1| hypothetical protein PAAG_05876 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 142
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 42/101 (41%), Gaps = 14/101 (13%)
Query: 4 VRSGLLQTALRRVSSASSAPPKRGFA---SSAHHDDAYETAKWEKITYLGIATCTVLA-- 58
VRSGLLQ + P F ++ A + W K++ G+ +LA
Sbjct: 24 VRSGLLQRRFTSTEQSGPVLPDNAFNRERAAVKAHAAATSDLWRKLSIYGVIPVIILASI 83
Query: 59 -FYNLSKGH-------PHYEEPPRYEYLHIRNKEFPWGPDG 91
+NL H P EE Y Y +IR K +PWG DG
Sbjct: 84 NAWNLWNEHWEHWEHMPPLEERVEYPYQNIRTKNYPWG-DG 123
>gi|290561677|gb|ADD38238.1| Cytochrome c oxidase subunit 6A1, mitochondrial [Lepeophtheirus
salmonis]
Length = 105
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 14/84 (16%)
Query: 11 TALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKI-TYLGIATCTV--LAFYNLSKGHP 67
TA+RR ++A SA + H D A W+KI ++GI + + + L H
Sbjct: 12 TAVRRYATAGSA-------EAGHGDSA---GFWKKIFLFVGIPAIVLGHINAFALPGDHE 61
Query: 68 HYEEPPRYEYLHIRNKEFPWGPDG 91
H E Y YL IR K FPWG DG
Sbjct: 62 HRPEFKPYPYLRIRKKPFPWG-DG 84
>gi|225711850|gb|ACO11771.1| Cytochrome c oxidase polypeptide VIa-liver, mitochondrial
precursor [Lepeophtheirus salmonis]
Length = 105
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 14/84 (16%)
Query: 11 TALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKI-TYLGIATCTV--LAFYNLSKGHP 67
TA+RR ++A SA + H D A W+KI ++GI + + + L H
Sbjct: 12 TAVRRYATAGSA-------EAGHGDSA---GFWKKIFLFVGIPAIVLGHINAFALPGDHE 61
Query: 68 HYEEPPRYEYLHIRNKEFPWGPDG 91
H E Y YL IR K FPWG DG
Sbjct: 62 HRPEFKPYPYLRIRKKPFPWG-DG 84
>gi|226294617|gb|EEH50037.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 142
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 14/101 (13%)
Query: 4 VRSGLLQTALRRVSSASSAPPKRGFA---SSAHHDDAYETAKWEKITYLGIATCTVLA-- 58
VRSGLLQ + P F ++ A + W K++ G+ +LA
Sbjct: 24 VRSGLLQRRFTSTEQSGPVLPDNAFNRERAAVKAHAAATSDLWRKLSIYGVIPVVILASI 83
Query: 59 -FYNLSKGH-------PHYEEPPRYEYLHIRNKEFPWGPDG 91
+NL H P EE Y Y ++R K +PWG DG
Sbjct: 84 NAWNLWNEHWEHWDHMPPLEERVEYPYQNVRTKNYPWG-DG 123
>gi|158296406|ref|XP_316821.4| AGAP000851-PA [Anopheles gambiae str. PEST]
gi|157015281|gb|EAA12143.4| AGAP000851-PA [Anopheles gambiae str. PEST]
Length = 110
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Query: 3 MVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYL----GIATCTVLA 58
++R + Q+ +R + A + H Y+ W+K+++ + C + A
Sbjct: 7 ILRRSISQSIVRNAEVGGPS------AVAGHEAGGYKV--WKKLSFFVAVPAVGLCMLNA 58
Query: 59 FYNLSKGHPH-YEEPPRYEYLHIRNKEFPWG 88
+ + H H E +YE+L IRNK FPWG
Sbjct: 59 YLKHQEEHGHPRPEFVKYEHLRIRNKRFPWG 89
>gi|148222617|ref|NP_001089622.1| cytochrome c oxidase subunit 6a polypeptide 1 [Xenopus laevis]
gi|71051873|gb|AAH99297.1| MGC116489 protein [Xenopus laevis]
Length = 111
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 15/92 (16%)
Query: 11 TALRRVSSA-SSAPPKRG---FASSAHHDDAYETAKWEKITYL----GIATCTVLAFYNL 62
AL R+S + P RG A++A + A W+ ++ + G+A C + + +
Sbjct: 2 AALGRLSGILRGSLPIRGRLFSAAAAEQEHAGAVRTWKILSAVVALPGVAVCMLNVYLKM 61
Query: 63 SKGHPHYEEPPR---YEYLHIRNKEFPWGPDG 91
H EE P YE+L IR+K+FPWG DG
Sbjct: 62 QH---HSEERPEFVPYEHLRIRSKKFPWG-DG 89
>gi|410922331|ref|XP_003974636.1| PREDICTED: cytochrome c oxidase subunit 6A, mitochondrial-like
[Takifugu rubripes]
Length = 111
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 14/96 (14%)
Query: 3 MVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYL----GIATCTVLA 58
M G L L R + S +R F+++A + W+ ++++ G+ C +
Sbjct: 1 MAALGQLSRVLLRSALTQS---RRQFSAAAAEHGEHSAKTWKILSFVVALPGVGVCMLNM 57
Query: 59 FYNLSKGHPHYEEPPR---YEYLHIRNKEFPWGPDG 91
F K H E P Y +L IR+K FPWG DG
Sbjct: 58 FL---KEQSHSHEQPEFVPYSHLRIRSKRFPWG-DG 89
>gi|261193609|ref|XP_002623210.1| cytochrome c oxidase subunit VIa [Ajellomyces dermatitidis
SLH14081]
gi|239588815|gb|EEQ71458.1| cytochrome c oxidase subunit VIa [Ajellomyces dermatitidis
SLH14081]
Length = 128
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 41/101 (40%), Gaps = 14/101 (13%)
Query: 4 VRSGLLQTALRRVSSASSAPPKRGFA---SSAHHDDAYETAKWEKITYLGIATCTVLA-- 58
VRSG+LQ P F ++ A + W K++ + +LA
Sbjct: 24 VRSGVLQRRFNSTEQKVPTLPDNAFNRERAAVKAHAAATSDLWRKLSIYVVVPVVILASV 83
Query: 59 -FYNLSKGH-------PHYEEPPRYEYLHIRNKEFPWGPDG 91
YNL H P EE Y Y +IRNK +PWG DG
Sbjct: 84 NAYNLWNEHWEHWDHMPPLEERVEYPYQNIRNKNYPWG-DG 123
>gi|388851733|emb|CCF54539.1| related to COX13-cytochrome-c oxidase chain VIa [Ustilago hordei]
Length = 134
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 20/108 (18%)
Query: 1 MAMVRSGLLQTALRRVSSASSAPPKRGFASSAHHDD-AYETAK-WEKIT-YLGIATCTVL 57
M + + + Q ++RR+++A A A+ HH + A ++A W K++ Y+ I VL
Sbjct: 14 MTLAVARVQQQSVRRLATA--AGENEFVAARVHHKEHAGKSADLWRKVSMYVCIPGSIVL 71
Query: 58 AFYNLSKGHPHYE-----------EPPR---YEYLHIRNKEFPWGPDG 91
Y HY+ +PP YEY +IR K FPWG DG
Sbjct: 72 GVYIYGIEKHHYDHMVHEYHENGNQPPERTFYEYNNIRKKAFPWG-DG 118
>gi|402590848|gb|EJW84778.1| cytochrome c oxidase subunit VIa family protein [Wuchereria
bancrofti]
Length = 136
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 52/127 (40%), Gaps = 27/127 (21%)
Query: 1 MAMVRSGLLQTALRRVSSASSAPPKRGFASSAHHD---DAYETAKWEK----ITYLGIAT 53
+++ RS L +T L++ + A S R + +D D + K++K + G
Sbjct: 9 LSITRSQLSRTQLKQTTKAFSGSQIRNTRPATDYDEEADDRDRFKYDKFYNAVVMYGSPV 68
Query: 54 CTVLAFYNLSKGHP---HYEEPP--RYEYLHIRNKEFPWG---------------PDGLF 93
+ FY GH H+++ Y YL +RNK PWG P F
Sbjct: 69 VLAILFYVTYLGHQMEEHFDQEKYVHYPYLTVRNKPLPWGDGNHSLFHNPERNYVPGVGF 128
Query: 94 EKKPEHH 100
EKK E H
Sbjct: 129 EKKQEKH 135
>gi|225558762|gb|EEH07046.1| cytochrome c oxidase subunit VIa [Ajellomyces capsulatus G186AR]
Length = 128
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 41/101 (40%), Gaps = 14/101 (13%)
Query: 4 VRSGLLQTALRRVSSASSAPPKRGFA---SSAHHDDAYETAKWEKITYLGIATCTVLA-- 58
VRSG+LQ P F ++ A + W K++ + +LA
Sbjct: 24 VRSGILQRRFNSTEQKLPPLPDNAFNRERAAVKAHAAATSDLWRKLSIYAVVPVVLLASI 83
Query: 59 -FYNLSKGH-------PHYEEPPRYEYLHIRNKEFPWGPDG 91
YNL H P EE Y Y +IRNK +PWG DG
Sbjct: 84 NAYNLWNEHWEHWEHMPPLEERVEYPYQNIRNKNYPWG-DG 123
>gi|242813021|ref|XP_002486081.1| cytochrome c oxidase subunit VIa, putative [Talaromyces stipitatus
ATCC 10500]
gi|218714420|gb|EED13843.1| cytochrome c oxidase subunit VIa, putative [Talaromyces stipitatus
ATCC 10500]
Length = 191
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 11/71 (15%)
Query: 31 SAHHDDAYETAKWEKITYLGIATCTV---LAFYNLSKGH-------PHYEEPPRYEYLHI 80
+ H A + W +++ G+ C + + YNL H P EE Y Y +I
Sbjct: 103 AVKHHAASTSKLWLRLSIFGVIPCLIGGSINAYNLWNEHWEHWNHLPPLEERTEYSYQNI 162
Query: 81 RNKEFPWGPDG 91
R K FPWG DG
Sbjct: 163 RTKNFPWG-DG 172
>gi|325183170|emb|CCA17627.1| AlNc14C38G3286 [Albugo laibachii Nc14]
Length = 109
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 15 RVSSASSAPPKRGFASSAHHD-----DAYETAKWEKITYLGIATC-TVLAFYNLSKGHPH 68
R+ + S+ R +S+ H+ + ++ W I + G+ T TV++ H
Sbjct: 9 RILTKSNTSGARQMSSATEHEAEEQMNLWKRISWGMIAFTGVFTVGTVISHLGEHHDHDD 68
Query: 69 YEEPPRYEYLHIRNKEFPW 87
EE P Y YL +RNK FPW
Sbjct: 69 DEEKPAYAYLKMRNKPFPW 87
>gi|239789640|dbj|BAH71432.1| ACYPI23643 [Acyrthosiphon pisum]
Length = 118
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query: 43 WEKITY-LGIATCTVLAFYNLSKGHPHYEEPPR-----YEYLHIRNKEFPWG 88
W+K+TY +G+ C + + Y ++ H + R YE+L IR + FPWG
Sbjct: 44 WKKVTYFIGLPGCLLASIYCINGHLEHEKHSSRPEFVPYEHLRIRTRRFPWG 95
>gi|238505974|ref|XP_002384189.1| cytochrome c oxidase subunit VIa, putative [Aspergillus flavus
NRRL3357]
gi|317151126|ref|XP_003190484.1| cytochrome c oxidase subunit VIa [Aspergillus oryzae RIB40]
gi|220690303|gb|EED46653.1| cytochrome c oxidase subunit VIa, putative [Aspergillus flavus
NRRL3357]
Length = 140
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 20/105 (19%)
Query: 5 RSGLLQTAL-RRVSSASSAPP-------KRGFASSAHHDDAYETAKWEKITYLGIATCTV 56
RS +++A+ RR +S S P R A+ HH A + W K++ + C +
Sbjct: 19 RSAPVRSAIQRRFNSTDSKLPWMVDNEFNRERAAVKHHA-ASTSDLWRKLSIYAVIPCLI 77
Query: 57 LA---FYNLSKGH-------PHYEEPPRYEYLHIRNKEFPWGPDG 91
L YNL + H P EE Y Y +IR K FPWG DG
Sbjct: 78 LGSLNAYNLWEEHWEHWEHMPPLEERVEYPYQNIRVKNFPWG-DG 121
>gi|284813510|ref|NP_001165368.1| cytochrome c oxidase subunit 6A, mitochondrial [Oncorhynchus
mykiss]
gi|5921903|sp|O13085.1|COX6A_ONCMY RecName: Full=Cytochrome c oxidase subunit 6A, mitochondrial;
AltName: Full=Cytochrome c oxidase polypeptide VIa;
Flags: Precursor
gi|2138312|gb|AAB58362.1| cytochrome c oxidase subunit VIa [Oncorhynchus mykiss]
Length = 102
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 12/84 (14%)
Query: 16 VSSASSAPPKRGFASSAHHDDAYETAK-WEKITYL----GIATCTVLAFYNLSKGHPHYE 70
++S +S +R ++++H +A+ W+ ++++ G+A C A+ + + H
Sbjct: 1 MASPASMAARRVLSAASHAGHEGGSARTWKILSFVLALPGVAVCIANAYMKMQQ---HSH 57
Query: 71 EPPR---YEYLHIRNKEFPWGPDG 91
EPP Y +L IR K++PWG DG
Sbjct: 58 EPPEFVAYSHLRIRTKKWPWG-DG 80
>gi|146746652|gb|ABQ43785.1| mitochondrial cytochrome c oxidase subunit VIa [Bombyx mori]
Length = 108
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 43 WEKITYLGIATCTVLAFYN--LSKGHPHYEEPPR--YEYLHIRNKEFPWGPDG 91
W+++++ L N L+ H+E PP YEY+ IR K FPWG DG
Sbjct: 36 WKRMSFFVAFPAIALGMLNAYLAHQEEHHERPPFVPYEYMRIRTKRFPWG-DG 87
>gi|154286662|ref|XP_001544126.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150407767|gb|EDN03308.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|240275155|gb|EER38670.1| cytochrome c oxidase subunit VIa [Ajellomyces capsulatus H143]
gi|325094514|gb|EGC47824.1| cytochrome c oxidase subunit VIa [Ajellomyces capsulatus H88]
Length = 128
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 41/101 (40%), Gaps = 14/101 (13%)
Query: 4 VRSGLLQTALRRVSSASSAPPKRGFA---SSAHHDDAYETAKWEKITYLGIATCTVLA-- 58
VRSG+LQ P F ++ A + W K++ + +LA
Sbjct: 24 VRSGVLQRRFNSTEQKLPPLPDNAFNRERAAVKAHAAATSDLWRKLSIYAVVPVVLLASI 83
Query: 59 -FYNLSKGH-------PHYEEPPRYEYLHIRNKEFPWGPDG 91
YNL H P EE Y Y +IRNK +PWG DG
Sbjct: 84 NAYNLWNEHWEHWEHMPPLEERVEYPYQNIRNKNYPWG-DG 123
>gi|6680988|ref|NP_031774.1| cytochrome c oxidase subunit 6A1, mitochondrial [Mus musculus]
gi|567766|gb|AAA53066.1| cytochrome c oxidase [Mus musculus]
gi|12832359|dbj|BAB22073.1| unnamed protein product [Mus musculus]
gi|13277855|gb|AAH03807.1| Cytochrome c oxidase, subunit VI a, polypeptide 1 [Mus musculus]
gi|26386158|dbj|BAB31662.2| unnamed protein product [Mus musculus]
gi|56078778|gb|AAH52816.1| Cytochrome c oxidase, subunit VI a, polypeptide 1 [Mus musculus]
gi|74151378|dbj|BAE38808.1| unnamed protein product [Mus musculus]
gi|148687915|gb|EDL19862.1| cytochrome c oxidase, subunit VI a, polypeptide 1 [Mus musculus]
gi|1094404|prf||2106151A cytochrome c oxidase:SUBUNIT=VIa
Length = 112
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 9/95 (9%)
Query: 3 MVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYL----GIATCTVLA 58
M+ S +L + + P R SS H + W+ +TY G+ +
Sbjct: 1 MMASAVLSASRVSRPLGRALPGLRRPMSSGAHGEEGSARMWKALTYFVALPGVGVSMLNV 60
Query: 59 FYNLSKGHPHYEEPP--RYEYLHIRNKEFPWGPDG 91
F L H +E PP Y +L IR K FPWG DG
Sbjct: 61 F--LKSRHEEHERPPFVAYPHLRIRTKPFPWG-DG 92
>gi|354497471|ref|XP_003510843.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Cricetulus griseus]
Length = 155
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 41/92 (44%), Gaps = 18/92 (19%)
Query: 6 SGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYL----GIATCTVLAFYN 61
SGLL AL RV R +S AH ++ W+ +TY G+ + F
Sbjct: 56 SGLLSRALPRVG--------RPMSSGAHGEEG-SARMWKALTYFVALPGVGVSMLNVF-- 104
Query: 62 LSKGHPHYEEPP--RYEYLHIRNKEFPWGPDG 91
L H +E P Y +L IR K FPWG DG
Sbjct: 105 LKSRHAEHERPEFVAYPHLRIRTKPFPWG-DG 135
>gi|425778483|gb|EKV16608.1| Cytochrome c oxidase polypeptide VIa [Penicillium digitatum PHI26]
gi|425784221|gb|EKV22012.1| Cytochrome c oxidase polypeptide VIa [Penicillium digitatum Pd1]
Length = 140
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 43/98 (43%), Gaps = 19/98 (19%)
Query: 11 TALRRVSSASSAPP-------KRGFASSAHHDDAYETAKWEKITYLGIATCTV---LAFY 60
T RR +SA + P R A+ HH A + W +++ + C + L Y
Sbjct: 26 TIQRRFNSAEAKPSWIVDNEFNRERAAVKHHA-ASTSDLWRRLSIFAVIPCLIGGGLNAY 84
Query: 61 NLSKGH-PHYE------EPPRYEYLHIRNKEFPWGPDG 91
NL H H+E E Y Y +IR K FPWG DG
Sbjct: 85 NLWSEHWEHWEHMAPLEERTEYPYQNIRTKNFPWG-DG 121
>gi|50756677|ref|XP_415270.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial
[Gallus gallus]
Length = 108
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 9 LQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFYNLSKGHPH 68
L+ R + +A + P R A+SA H+ W+ ++++ + N H
Sbjct: 4 LRGLSRLLPAAPGSVPARSMAASAAHEGG-GARLWKTLSFVVALPAVGVCMLNCYLKAQH 62
Query: 69 YEEPP---RYEYLHIRNKEFPWGPDG 91
E P RY +L IR+K FPWG DG
Sbjct: 63 EHERPEFIRYAHLRIRSKPFPWG-DG 87
>gi|302695063|ref|XP_003037210.1| hypothetical protein SCHCODRAFT_43659 [Schizophyllum commune H4-8]
gi|300110907|gb|EFJ02308.1| hypothetical protein SCHCODRAFT_43659, partial [Schizophyllum
commune H4-8]
Length = 116
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 15/72 (20%)
Query: 37 AYETAKWEKIT-YLGIATCTVLAFYNLSKGHPHYE--------------EPPRYEYLHIR 81
A T W K++ Y+ I V Y K H +PP YEYL++R
Sbjct: 38 AETTDLWRKVSFYVCIPAMLVCGAYVYKKETDHLAHLEHLRHENDGVLPQPPEYEYLNMR 97
Query: 82 NKEFPWGPDGLF 93
K +PWG + LF
Sbjct: 98 RKPYPWGKNSLF 109
>gi|405970718|gb|EKC35597.1| Cytochrome c oxidase subunit 6A1, mitochondrial [Crassostrea
gigas]
Length = 130
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Query: 14 RRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFYNL-SKGHPHYEEP 72
RR++++ A K + E +W IT + C V Y + + H E
Sbjct: 17 RRLATSVDASYKDSLPAKVSGHPEAEIKRWWAITLWMVGVCAVTRVYQMMDENHGKRPEF 76
Query: 73 PRYEYLHIRNKEFPW 87
Y++L IR K FPW
Sbjct: 77 IPYQHLRIRKKAFPW 91
>gi|355710157|gb|EHH31621.1| Cytochrome c oxidase polypeptide VIa-heart [Macaca mulatta]
Length = 97
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 12/76 (15%)
Query: 23 PPKRGFASSA---HHDDAYETAKWEKITYL----GIATCTVLAFYNLSKGHPHYEEPPRY 75
P RG AS+A H A T W ++++ +A CT + NL GH E Y
Sbjct: 7 PLTRGLASAAKGGHEGSAART--WRLLSFVLALPSVALCTFNS--NLHSGHRPRPEFHSY 62
Query: 76 EYLHIRNKEFPWGPDG 91
++L IR K FPWG DG
Sbjct: 63 QHLRIRTKPFPWG-DG 77
>gi|310794036|gb|EFQ29497.1| cytochrome c oxidase subunit VIa [Glomerella graminicola M1.001]
Length = 127
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 11/88 (12%)
Query: 11 TALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITY------LGIATCTVLAFYNLSK 64
T RR +S S R ++ HH A TA W KI+ LG+A +N
Sbjct: 21 TVQRRFASTSDNAFIREREAAKHHA-ASTTALWRKISIYGCIPALGLAAANAYVLWNEHW 79
Query: 65 GH----PHYEEPPRYEYLHIRNKEFPWG 88
H P EE Y Y +IR K + WG
Sbjct: 80 EHWSHLPPLEERTEYSYQNIRTKNYQWG 107
>gi|322709549|gb|EFZ01125.1| cytochrome c oxidase subunit VIa, putative [Metarhizium anisopliae
ARSEF 23]
Length = 129
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 23/111 (20%)
Query: 3 MVRSGLLQTALRRVSSASSAPPKRGFASSAHHDD-----------AYETAK-WEKITYLG 50
M S L R ++ AP +R AS++ ++ A ET + W+KI+ G
Sbjct: 1 MFASRLATRNASRFAAQLRAPAQRRLASTSAENEFIKERQHIKEHAKETTELWKKISIYG 60
Query: 51 IATCTVLAFYN---LSKGH-------PHYEEPPRYEYLHIRNKEFPWGPDG 91
+ C LA N L K H P EE Y Y +IR K + WG DG
Sbjct: 61 VIPCLALAGANAWYLWKEHWEHWSHMPPLEERIEYPYQNIRTKNYQWG-DG 110
>gi|73995307|ref|XP_534704.2| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
isoform 2 [Canis lupus familiaris]
gi|345790934|ref|XP_003433433.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
isoform 1 [Canis lupus familiaris]
Length = 110
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Query: 20 SSAPPKRGFASSAHHDDAYETAKWEKITYL----GIATCTVLAFYNLSKGHPHYEEPPRY 75
S AP R +S AH ++ W+ +TY G+ + F G E Y
Sbjct: 17 SGAPLGRSMSSGAHGEEG-SARMWKALTYFVALPGVGVSMLNVFLKSHHGEHERPEFIAY 75
Query: 76 EYLHIRNKEFPWGPDG 91
+L IR+K FPWG DG
Sbjct: 76 PHLRIRSKPFPWG-DG 90
>gi|307207908|gb|EFN85469.1| Cytochrome c oxidase polypeptide 6A1, mitochondrial [Harpegnathos
saltator]
Length = 104
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 15/89 (16%)
Query: 8 LLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFYNLSKGHP 67
+++T R+ SSAS+ S H +A W+++++ LA N H
Sbjct: 7 VVRTFTRKYSSASTE-------GSTHSKNA--EILWKRLSFFVAFPAIGLAMLNSYLNHQ 57
Query: 68 --HYEEPPR---YEYLHIRNKEFPWGPDG 91
H++E P Y++L IRNK FPWG DG
Sbjct: 58 AHHHDERPEFIPYDHLRIRNKSFPWG-DG 85
>gi|1352173|sp|P43024.2|CX6A1_MOUSE RecName: Full=Cytochrome c oxidase subunit 6A1, mitochondrial;
AltName: Full=Cytochrome c oxidase polypeptide
VIa-liver; Flags: Precursor
Length = 111
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 25 KRGFASSAHHDDAYETAKWEKITYL----GIATCTVLAFYNLSKGHPHYEEPP--RYEYL 78
+R +S AH ++ W+ +TY G+ + F L H +E PP Y +L
Sbjct: 23 RRPMSSGAHGEEG-SARMWKALTYFVALPGVGVSMLNVF--LKSRHEEHERPPFVAYPHL 79
Query: 79 HIRNKEFPWGPDG 91
IR K FPWG DG
Sbjct: 80 RIRTKPFPWG-DG 91
>gi|170583215|ref|XP_001896480.1| Cytochrome c oxidase subunit VIa family protein [Brugia malayi]
gi|158596301|gb|EDP34672.1| Cytochrome c oxidase subunit VIa family protein [Brugia malayi]
Length = 136
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 27/127 (21%)
Query: 1 MAMVRSGLLQTALRRVSSASSAP------PKRGFASSAHHDDAYETAK-WEKITYLGIAT 53
+++ R+ L +T L++++ A S P + A D ++ K + + G
Sbjct: 9 LSITRTQLSRTQLKQMTKAFSGSQIQNTHPATNYDEEADDRDRFKYDKFYNSVVMYGSPV 68
Query: 54 CTVLAFYNLSKGHP---HYEEPP--RYEYLHIRNKEFPWG---------------PDGLF 93
+ FY GH H+++ Y YL +RNK PWG P F
Sbjct: 69 VLAILFYVTYLGHQMEEHFDQDKYVHYPYLTVRNKPLPWGDGNHSLFHNPERNYVPGVGF 128
Query: 94 EKKPEHH 100
EKK E H
Sbjct: 129 EKKQEKH 135
>gi|46129425|ref|XP_389064.1| hypothetical protein FG08888.1 [Gibberella zeae PH-1]
Length = 126
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 23/108 (21%)
Query: 1 MAMVRSGLLQTALRRVSSASSAPPKRGFASSAHH----------DDAYETAKWEKITYLG 50
M+ VR A R ++ AP +R FAS+ + A T W+KI+ G
Sbjct: 1 MSAVR---FTRAATRATAQLRAPAQRRFASTQNEFIKERQHIKEHAAGTTELWKKISLYG 57
Query: 51 IATCTVLA----FYNLSKGHPHY------EEPPRYEYLHIRNKEFPWG 88
+A C + A ++ S+ H+ EE Y Y +IR K + WG
Sbjct: 58 VAPCLIAAGANAYWLWSEHWEHWSHMPPLEERTEYPYQNIRTKNYQWG 105
>gi|77736544|ref|NP_036946.1| cytochrome c oxidase subunit 6A1, mitochondrial precursor [Rattus
norvegicus]
gi|1352174|sp|P10818.2|CX6A1_RAT RecName: Full=Cytochrome c oxidase subunit 6A1, mitochondrial;
AltName: Full=Cytochrome c oxidase polypeptide
VIa-liver; Flags: Precursor
gi|149063563|gb|EDM13886.1| cytochrome c oxidase, subunit VIa, polypeptide 1 [Rattus
norvegicus]
Length = 111
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 41/92 (44%), Gaps = 18/92 (19%)
Query: 6 SGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYL----GIATCTVLAFYN 61
SGLL AL RV R +S AH ++ W+ +TY G+ + F
Sbjct: 12 SGLLGRALPRVG--------RPMSSGAHGEEG-SARIWKALTYFVALPGVGVSMLNVF-- 60
Query: 62 LSKGHPHYEEPP--RYEYLHIRNKEFPWGPDG 91
L H +E P Y +L IR K FPWG DG
Sbjct: 61 LKSRHEEHERPEFVAYPHLRIRTKPFPWG-DG 91
>gi|195383858|ref|XP_002050642.1| GJ22272 [Drosophila virilis]
gi|194145439|gb|EDW61835.1| GJ22272 [Drosophila virilis]
Length = 102
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
Query: 36 DAYETAKWEKITYLGIATCTVLAFYNLSKGHPHYEEPPR-----YEYLHIRNKEFPWGPD 90
+A + W+++T+L L N + P E PR YE+L RNK FPWG D
Sbjct: 26 NASGSMLWKRVTFLVATPAIALCMINAYRSKPG--EQPRQPFVKYEHLRRRNKRFPWG-D 82
Query: 91 G 91
G
Sbjct: 83 G 83
>gi|395501153|ref|XP_003754962.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Sarcophilus harrisii]
Length = 111
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 8 LLQTALRRVSS---ASSAPPKRGFASSAHHDDAYE-TAKWEKITYLGIA----TCTVLAF 59
++ T RRV + S A R F SS+ + E +A+ K+ G+A +++
Sbjct: 1 MMATTGRRVLTFLGQSRALAGRTFLSSSSMEGIEEGSARMWKMLTFGLALPGVMVSMINC 60
Query: 60 YNLSKGHPHYEEPPRYEYLHIRNKEFPWGPDG 91
Y +K HP + Y +L IR K FPWG DG
Sbjct: 61 YLKAKDHPRRHKFVPYSHLRIRTKPFPWG-DG 91
>gi|408392229|gb|EKJ71587.1| hypothetical protein FPSE_08226 [Fusarium pseudograminearum CS3096]
Length = 126
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 23/108 (21%)
Query: 1 MAMVRSGLLQTALRRVSSASSAPPKRGFASSAHH----------DDAYETAKWEKITYLG 50
M+ VR A R ++ AP +R FAS+ + A T W+KI+ G
Sbjct: 1 MSAVR---FTRAATRATAQLRAPAQRRFASTQNEFIKERQHIKEHAAGTTELWKKISLYG 57
Query: 51 IATCTVLA----FYNLSKGHPHY------EEPPRYEYLHIRNKEFPWG 88
+A C + A ++ S+ H+ EE Y Y +IR K + WG
Sbjct: 58 VAPCLIAAGANAYWLWSEHWEHWSHMPPLEERTEYPYQNIRTKNYQWG 105
>gi|169843764|ref|XP_001828607.1| hypothetical protein CC1G_10278 [Coprinopsis cinerea okayama7#130]
gi|116510315|gb|EAU93210.1| hypothetical protein CC1G_10278 [Coprinopsis cinerea okayama7#130]
Length = 127
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 15/69 (21%)
Query: 40 TAKWEKITYLGI--ATCTVLAF-YNLSKGHP-HYE-----------EPPRYEYLHIRNKE 84
T W KI+Y G V+A+ YN+ H H E E P Y++L+ R K
Sbjct: 48 TDLWRKISYYGCFPGIVAVVAWVYNVEVEHAAHIEHLKEENGGELPETPAYDFLNRRAKP 107
Query: 85 FPWGPDGLF 93
FPWG + LF
Sbjct: 108 FPWGANSLF 116
>gi|221102584|ref|XP_002153881.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Hydra magnipapillata]
Length = 120
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 14/94 (14%)
Query: 9 LQTALRRVSSASSAPPKRGF----ASSAHHDDAYETAK-WEKITYLGIATCTVLAFYNLS 63
+ A+R SS +A + + AS H +A TAK W+++T G L Y++
Sbjct: 12 FRLAVRHSSSDKAALALKAYNDAMASEIAHAEA--TAKLWKRLTLFGALPLIALVGYHVM 69
Query: 64 ------KGHPHYEEPPRYEYLHIRNKEFPWGPDG 91
+ H H E Y +L IRNK FPWG DG
Sbjct: 70 TTEAEHEAHFHRPEFIPYSHLRIRNKPFPWG-DG 102
>gi|219120339|ref|XP_002180910.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407626|gb|EEC47562.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 139
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 11/81 (13%)
Query: 25 KRGFASSAHH---DDAYETAKWEKITY-LGIATCTVLAFYNL---SKGHPHYEEPPRYEY 77
K + HH ++ E +W IT+ + I C + A Y GH E P E+
Sbjct: 51 KELLKTQEHHTIEEELGEMWRWVNITFWVAIPICVLSAAYTFFFEEHGHRIEENVP--EF 108
Query: 78 LHIRNKEFPW--GPDGLFEKK 96
+ IR KEFPW G LF+ K
Sbjct: 109 MGIRTKEFPWECGECDLFDSK 129
>gi|197128995|gb|ACH45493.1| putative cytochrome c oxidase subunit VIa polypeptide 1
[Taeniopygia guttata]
Length = 113
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 43 WEKITYL----GIATCTVLAFYNLSKGHPHYEEPPRYEYLHIRNKEFPWGPDG 91
W+ +T+L G+A C + + H E P Y +L IR K FPWG DG
Sbjct: 39 WKTLTFLVALPGVAVCMLNCYLKAQHHHERPEFVP-YSHLRIRTKRFPWG-DG 89
>gi|348585405|ref|XP_003478462.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Cavia porcellus]
Length = 110
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Query: 3 MVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFYNL 62
MV + L + + R+ S R +S AH + W+ +T+ ++ N+
Sbjct: 1 MVAAALAVSRVSRLLGRSRLQVGRLMSSGAHGHEG-SARMWKALTFFVALPGVAVSMLNV 59
Query: 63 SKGHPHYEEPPR---YEYLHIRNKEFPWGPDG 91
H EE P Y +L IR K FPWG DG
Sbjct: 60 FLKSHHEEERPEFIAYPHLRIRTKPFPWG-DG 90
>gi|363751581|ref|XP_003646007.1| hypothetical protein Ecym_4111 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889642|gb|AET39190.1| hypothetical protein Ecym_4111 [Eremothecium cymbalariae
DBVPG#7215]
Length = 3264
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 2 AMVRSGLLQTALRRVSSASSAPPKRGFASSAHH-----DDAYETAKWEKITYLGIATCTV 56
+++ +GL+ + L +S +S KR AS+AH DA TA++ I TV
Sbjct: 420 SLISAGLISSLLEIISIKNSKY-KRTLASAAHLLEDVISDADATAEFINNNGFNILIETV 478
Query: 57 LAFYNLSKGHPHYEEPPRYEYLH 79
N + HP + EPP+Y ++
Sbjct: 479 TNEVNFALEHPDFGEPPKYSVVY 501
>gi|336264662|ref|XP_003347107.1| hypothetical protein SMAC_05406 [Sordaria macrospora k-hell]
gi|380093802|emb|CCC08766.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 136
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 41/99 (41%), Gaps = 15/99 (15%)
Query: 7 GLLQTALRRVSSA-SSAPPKRGFA---SSAHHDDAYETAKWEKITYLGIATCTVLAFYN- 61
+ QT RR +S ++ K F + A T W KI+ GI LA YN
Sbjct: 20 AVRQTVQRRFASTPATGTGKNAFVREREAVKQHAAETTELWRKISLYGIPPALALAGYNA 79
Query: 62 --LSKGH-------PHYEEPPRYEYLHIRNKEFPWGPDG 91
L H P EE Y Y +IR + +PWG DG
Sbjct: 80 YTLYNEHWEHWSHLPPLEERTEYPYQNIRTRNYPWG-DG 117
>gi|260908362|gb|ACX53902.1| cytochrome c oxidase subunit VIa/COX13 [Rhipicephalus sanguineus]
Length = 108
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 12/93 (12%)
Query: 9 LQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFYNLSKG--- 65
LQ A R S +++ + G A H A W++++ L N+
Sbjct: 6 LQQAFRNFSKSAARFSRHGDA----HSHAAGELLWKRLSIFVAFPAXALCGINVYLAEVE 61
Query: 66 ---HPHYEEPPRYEYLHIRNKEFPWGPD--GLF 93
H H E YEY+HIR K++PWG GLF
Sbjct: 62 HMKHSHRPEYHPYEYIHIRTKKYPWGDGNRGLF 94
>gi|254586503|ref|XP_002498819.1| ZYRO0G19272p [Zygosaccharomyces rouxii]
gi|238941713|emb|CAR29886.1| ZYRO0G19272p [Zygosaccharomyces rouxii]
Length = 131
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 17/97 (17%)
Query: 9 LQTALRRVSSASSAPPKRGFASSAHHDDAYETAK-WEKIT-YLGI--ATCTVLAFYNLSK 64
L+ A + V ++ K +S HH A +T+K W +IT ++ + T + Y + K
Sbjct: 21 LEPAFKNVDVKAANAFKHELEASQHH--AKDTSKFWIRITAFVAVPAVALTAINTYFVEK 78
Query: 65 GHPHYEE----------PPRYEYLHIRNKEFPWGPDG 91
H + E P YEY++IR+K F WG DG
Sbjct: 79 EHAEHREHLEHISDEDWPKNYEYMNIRSKPFFWG-DG 114
>gi|298705214|emb|CBJ28645.1| cytochrome c oxidase subunit VIa [Ectocarpus siliculosus]
Length = 107
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 37 AYETAKWEKITY-LGIATCTVLAFYNLSKGHPHYEE-PPRYEYLHIRNKEFPWG 88
A E AKW+K+T +G+ + V ++ H H +E P Y+ IRNK PW
Sbjct: 33 AEEMAKWKKMTAGMGVLSLAVTTLVLATEEHHHRDEDAPIPSYMKIRNKPHPWN 86
>gi|327358509|gb|AEA51101.1| cytochrome c oxidase subunit VIa precursor [Oryzias melastigma]
Length = 101
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 16 VSSASSAPPKRGFASSAHHDDAYETAKWEKITYL----GIATCTVLAFYNLSKGHPHYEE 71
+SSA+ A + A+++H + W+ +T++ G+ C A+ + H E
Sbjct: 1 MSSATLAARRVLAAAASHGAEEAGAKTWKILTFVLAFPGVGVCMANAYMKMQAHGDHQPE 60
Query: 72 PPRYEYLHIRNKEFPWGPDG 91
Y +L IR K+FPWG DG
Sbjct: 61 FVPYSHLRIRTKKFPWG-DG 79
>gi|400595546|gb|EJP63341.1| cytochrome c oxidase subunit VIa [Beauveria bassiana ARSEF 2860]
Length = 143
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 41/99 (41%), Gaps = 23/99 (23%)
Query: 15 RVSSASSAPPKRGFASSAHHDDAYE------------TAKWEKITYLGIATCTVLAFYN- 61
R ++ A +R FASSA ++ + T W KI+ G+ C + A N
Sbjct: 13 RFAAQVRAGAQRRFASSATENEFIKERQHIKDHAKSTTELWRKISIYGVTPCLIAAGANA 72
Query: 62 --LSKGH-------PHYEEPPRYEYLHIRNKEFPWGPDG 91
L H P E+ Y Y +IR K F WG DG
Sbjct: 73 YYLWNEHWEHWSHMPALEDRTEYAYQNIRTKNFQWG-DG 110
>gi|348690150|gb|EGZ29964.1| hypothetical protein PHYSODRAFT_353708 [Phytophthora sojae]
Length = 98
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 26 RGFASSAHHDDAYETAKWEKITYLGIATCTVLAFYNLSK--GHPHYE-EPPRYEYLHIRN 82
R +S+ + + +W I+ IA +V Y + H H+E + P Y YL +R
Sbjct: 10 RNMSSATEQEAKEQMHRWTTISKGMIALTSVYTVYAIGDHLSHEHHEKDTPAYPYLKMRT 69
Query: 83 KEFPW 87
K FPW
Sbjct: 70 KPFPW 74
>gi|115402639|ref|XP_001217396.1| predicted protein [Aspergillus terreus NIH2624]
gi|114189242|gb|EAU30942.1| predicted protein [Aspergillus terreus NIH2624]
Length = 177
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 20/96 (20%)
Query: 14 RRVSSASSAPP--------KRGFASSAHHDDAYETAKWEKITYLGIATCTVLA---FYNL 62
RR++S + P R A+ HH A + W+K++ + C +L YNL
Sbjct: 29 RRLNSTDAKMPSWAVDNEFNRERANVKHHA-ASTSDLWKKLSIFAVIPCLILGSVNAYNL 87
Query: 63 SKGH-------PHYEEPPRYEYLHIRNKEFPWGPDG 91
+ H P EE Y Y +IR K +PWG DG
Sbjct: 88 WEEHWEHWEHMPPLEERTEYPYQNIRVKNYPWG-DG 122
>gi|297493738|gb|ADI40591.1| cytochrome c oxidase subunit VIa polypeptide 1 [Rousettus
leschenaultii]
Length = 94
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 30 SSAHHDDAYETAKWEKITYL----GIATCTVLAFYNLSKGHPHYEEPPRYEYLHIRNKEF 85
SS H + W+ +TY G+A + F G E Y +L IR+K F
Sbjct: 17 SSGAHGEEGSARMWKALTYFVALPGVAVSMLNVFLKSRHGEHERPEFIAYPHLRIRSKRF 76
Query: 86 PWGPDG 91
PWG DG
Sbjct: 77 PWG-DG 81
>gi|350537313|ref|NP_001233186.1| cytochrome c oxidase subunit 6A1, mitochondrial [Taeniopygia
guttata]
gi|197128999|gb|ACH45497.1| putative cytochrome c oxidase subunit VIa polypeptide 1
[Taeniopygia guttata]
gi|197129005|gb|ACH45503.1| putative cytochrome c oxidase subunit VIa polypeptide 1
[Taeniopygia guttata]
gi|197129008|gb|ACH45506.1| putative cytochrome c oxidase subunit VIa polypeptide 1
[Taeniopygia guttata]
Length = 108
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 10/55 (18%)
Query: 43 WEKITYL----GIATCTVLAFYNLSKGHPHYEEPPR--YEYLHIRNKEFPWGPDG 91
W+ +T+L G+A C + + K H+E P Y +L IR K FPWG DG
Sbjct: 39 WKTLTFLVALPGVAVCMLNCYL---KAQHHHERPEFVPYSHLRIRTKRFPWG-DG 89
>gi|85112355|ref|XP_964326.1| hypothetical protein NCU01962 [Neurospora crassa OR74A]
gi|28926104|gb|EAA35090.1| hypothetical protein NCU01962 [Neurospora crassa OR74A]
gi|336463553|gb|EGO51793.1| hypothetical protein NEUTE1DRAFT_118541 [Neurospora tetrasperma
FGSC 2508]
Length = 136
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 41/99 (41%), Gaps = 15/99 (15%)
Query: 7 GLLQTALRRVSSA-SSAPPKRGFA---SSAHHDDAYETAKWEKITYLGIATCTVLAFYN- 61
+ QT RR +S ++ K F + A T W KI+ GI LA YN
Sbjct: 20 AVRQTVQRRFASTPANESGKNAFVREREAVKQHAAETTELWRKISLYGIPPALALAGYNA 79
Query: 62 --LSKGH-------PHYEEPPRYEYLHIRNKEFPWGPDG 91
L H P EE Y Y +IR + +PWG DG
Sbjct: 80 YTLYNEHWEHWSHLPPLEERTEYPYQNIRTRNYPWG-DG 117
>gi|302563911|ref|NP_001181507.1| cytochrome c oxidase subunit 6A2, mitochondrial [Macaca mulatta]
Length = 97
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 12/76 (15%)
Query: 23 PPKRGFASSA---HHDDAYETAKWEKITYL----GIATCTVLAFYNLSKGHPHYEEPPRY 75
P RG AS+A H A T W ++++ +A CT ++ L GH E Y
Sbjct: 7 PLTRGLASAAKGGHEGSAART--WRLLSFVLALPSVALCTFNSY--LHSGHRPRPEFHSY 62
Query: 76 EYLHIRNKEFPWGPDG 91
++L IR K FPWG DG
Sbjct: 63 QHLRIRTKPFPWG-DG 77
>gi|50412824|ref|XP_457168.1| DEHA2B04730p [Debaryomyces hansenii CBS767]
gi|49652833|emb|CAG85163.1| DEHA2B04730p [Debaryomyces hansenii CBS767]
Length = 137
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 15/101 (14%)
Query: 4 VRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITY---LGIATCTVLAFY 60
V + + A +V + K+ A H + T W+KITY L + T +
Sbjct: 23 VSKRIAENAFPKVDKQAGEAFKKASREKAEHSEGI-TKLWKKITYVVALPVVLLTAIPIA 81
Query: 61 NLSKGH----------PHYEEPPRYEYLHIRNKEFPWGPDG 91
+ H P E P +YEY ++R K+F WG DG
Sbjct: 82 RIEMHHAEHRKHLREVPDEEWPTQYEYQNLRQKKFFWG-DG 121
>gi|355786586|gb|EHH66769.1| hypothetical protein EGM_03822 [Macaca fascicularis]
Length = 114
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 37/95 (38%), Gaps = 5/95 (5%)
Query: 1 MAMVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFY 60
MA V + L R S P SS H + W+ +T+ ++
Sbjct: 1 MAAVGVSRVSRRLGRSGPGRSGPQLGRPVSSGAHGEEGSARMWKTLTFFVALPGVAVSML 60
Query: 61 N--LSKGHPHYEEPP--RYEYLHIRNKEFPWGPDG 91
N L H +E P Y +L IR K FPWG DG
Sbjct: 61 NVYLKSHHGEHERPKFIAYPHLRIRTKPFPWG-DG 94
>gi|443895284|dbj|GAC72630.1| cytochrome c oxidase, subunit VIb/COX13 [Pseudozyma antarctica
T-34]
Length = 131
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 20/98 (20%)
Query: 11 TALRRVSSASSAPPKRGFASSAHHDD-AYETAK-WEKIT-YLGIATCTVLAFYNLSKGHP 67
+A+RR ++A A A AHH + A ++A W K++ Y+ I VL Y
Sbjct: 21 SAVRRYATA--AGENEFVAERAHHKEHAGKSADLWRKVSLYVCIPGSIVLGVYIYGIEKH 78
Query: 68 HYE-----------EPPR---YEYLHIRNKEFPWGPDG 91
HY+ +PP YEY +IR K FPWG DG
Sbjct: 79 HYDHMVHEFHENDNQPPERTFYEYNNIRKKAFPWG-DG 115
>gi|328862420|gb|EGG11521.1| hypothetical protein MELLADRAFT_74085 [Melampsora larici-populina
98AG31]
Length = 130
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 29/69 (42%), Gaps = 15/69 (21%)
Query: 40 TAKWEKITYLGIATCTVLAFYNLSKGHPHYE---------------EPPRYEYLHIRNKE 84
T W KITY VLA +N K +E E +Y+YL+ R K
Sbjct: 51 TDLWRKITYYVGFPAVVLALFNAQKLANEHEAHLEHIKEENGGELPERIQYDYLNRRAKS 110
Query: 85 FPWGPDGLF 93
FPWG LF
Sbjct: 111 FPWGNYTLF 119
>gi|326433427|gb|EGD78997.1| cytochrome c oxidase polypeptide VIa [Salpingoeca sp. ATCC 50818]
Length = 157
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
Query: 12 ALRRVSSASSAPPKRGFASS----AHHDDAYETAKWEKITY------LGIATCTVLAFYN 61
A+RR +SA+ R +S A ++ ++ AK TY + I C ++ F +
Sbjct: 46 AMRRAASAAHRTQTRSASSLGPSLAEQEEVFDHAKKTLGTYRNISLFVAIPACLLIGFKS 105
Query: 62 LSKG-HPHYEEPPRYEYLHIRNKEFPWGPDG 91
H H E Y++L R K+FPWG DG
Sbjct: 106 FVLAEHEHAPEFVEYDHLRKRAKKFPWG-DG 135
>gi|302921478|ref|XP_003053291.1| hypothetical protein NECHADRAFT_99757 [Nectria haematococca mpVI
77-13-4]
gi|256734231|gb|EEU47578.1| hypothetical protein NECHADRAFT_99757 [Nectria haematococca mpVI
77-13-4]
Length = 128
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 49/112 (43%), Gaps = 24/112 (21%)
Query: 1 MAMVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYE-----------TAKWEKITYL 49
M+ VR +TA RVS+ P +R FAS+ ++ E T W+KI+
Sbjct: 1 MSAVRQ-FTRTA-SRVSAQLRVPAQRRFASTVENEFIKERQHIKDHAKGTTELWKKISIF 58
Query: 50 GIATCTVLAFYN---LSKGH-------PHYEEPPRYEYLHIRNKEFPWGPDG 91
G+ L+ N L H P EE Y Y +IR+K + WG DG
Sbjct: 59 GVIPALALSAANAYWLWNEHWDHWNHMPPLEERTEYPYQNIRSKNYQWG-DG 109
>gi|475707|gb|AAA17836.1| cytochrome c oxidase subunit VIaL [Mus musculus]
gi|4090852|gb|AAC98895.1| cytochrome C oxidase subunit VIa homolog [Homo sapiens]
Length = 86
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Query: 30 SSAHHDDAYETAKWEKITYL----GIATCTVLAFYNLSKGHPHYEEPP--RYEYLHIRNK 83
SS H + W+ +TY G+ + F L H +E PP Y +L IR K
Sbjct: 2 SSGAHGEEGSARMWKALTYFVALPGVGVSMLNVF--LKSRHEEHERPPFVAYPHLRIRTK 59
Query: 84 EFPWGPDG 91
FPWG DG
Sbjct: 60 PFPWG-DG 66
>gi|242012085|ref|XP_002426771.1| cytochrome c oxidase polypeptide Via isoform 1, putative
[Pediculus humanus corporis]
gi|212510953|gb|EEB14033.1| cytochrome c oxidase polypeptide Via isoform 1, putative
[Pediculus humanus corporis]
Length = 116
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 39 ETAKWEKITYL--GIATCTVLAFYNLSKGHPHYEEPPRYEYLHIRNKEFPWGPDG 91
ETA K T++ I + F + + HP E +Y YL IR K++PWG DG
Sbjct: 37 ETASLWKKTFIFACIPILALCTFSVMIEEHPERPEFVKYSYLRIRKKKYPWG-DG 90
>gi|444723182|gb|ELW63843.1| Cytochrome c oxidase subunit 6A1, mitochondrial [Tupaia
chinensis]
Length = 109
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 3 MVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYL----GIATCTVLA 58
M + +LQ + R+ S S R +S AH ++ W+ +TY G+ +
Sbjct: 1 MAAAAVLQVS--RLLSRSCPQLGRPMSSGAHGEEG-SARMWKALTYFVALPGVGVSMLNV 57
Query: 59 FYNLSKGHPHYEEPP--RYEYLHIRNKEFPWGPDG 91
F L H +E P Y +L IR+K FPWG DG
Sbjct: 58 F--LKSHHEEHERPEFIAYPHLRIRSKPFPWG-DG 89
>gi|320167249|gb|EFW44148.1| hypothetical protein CAOG_02173 [Capsaspora owczarzaki ATCC
30864]
Length = 96
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 40 TAKWEKITYLGIATCTVLAFYNLSKGHPHYEEPPRYEYLHIRNKEFPWG 88
T W++I+ +LA N H + + Y +L IRNK FPW
Sbjct: 34 TVTWKRISLFVAFPAVLLATANAVAAHEEHHDYIAYPHLRIRNKAFPWS 82
>gi|340975598|gb|EGS22713.1| cytochrome c oxidase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 129
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 17/99 (17%)
Query: 6 SGLLQTALRRVSSASSAPPKRGFASSAHH--DDAYETAK-WEKITYLGIATCTVLA---F 59
+ L A RR++S + + F H + A TA+ W KI+ + +LA
Sbjct: 16 AQLRAQAQRRLASTET---ENSFVRERRHVKEHAKATAELWRKISLYAVPPAMILAGINA 72
Query: 60 YNLSKGH-------PHYEEPPRYEYLHIRNKEFPWGPDG 91
YNL H P EE Y Y +IR + FPWG DG
Sbjct: 73 YNLWNEHWEHWSHLPPLEERVEYPYQNIRTRNFPWG-DG 110
>gi|432867504|ref|XP_004071222.1| PREDICTED: cytochrome c oxidase subunit 6A, mitochondrial-like
[Oryzias latipes]
Length = 101
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 43 WEKITYL----GIATCTVLAFYNLSKGHPHYEEPPRYEYLHIRNKEFPWGPDG 91
W+ +T++ G+ C A+ + H E Y +L IR K+FPWG DG
Sbjct: 28 WKILTFVLAFPGVGVCMANAYMKMQHHSHHQPEFVPYSHLRIRTKKFPWG-DG 79
>gi|407918297|gb|EKG11568.1| Cytochrome c oxidase subunit VIa [Macrophomina phaseolina MS6]
Length = 128
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 42/111 (37%), Gaps = 28/111 (25%)
Query: 8 LLQTALRRVSSASSAPPKRGFASSAHHDDAYETA-----------------KWEKITY-- 48
L + LRR + A P R +AS H + A + A W K++
Sbjct: 2 LSRAVLRRSAQALRTPATRRWASQTHFEGAADNAFNRERAAVKQHAAETSDLWRKLSIYV 61
Query: 49 ----LGIATCTVLAFYNLSKGH----PHYEEPPRYEYLHIRNKEFPWGPDG 91
L IA +N H P EE P Y Y ++R K F WG DG
Sbjct: 62 VIPALAIAGANAYRLWNEHWEHVSHMPPLEERPEYPYQNLRTKNFFWG-DG 111
>gi|121704748|ref|XP_001270637.1| cytochrome c oxidase subunit VIa, putative [Aspergillus clavatus
NRRL 1]
gi|119398783|gb|EAW09211.1| cytochrome c oxidase subunit VIa, putative [Aspergillus clavatus
NRRL 1]
Length = 135
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 47/106 (44%), Gaps = 21/106 (19%)
Query: 4 VRSGLLQTAL-RRVSSASSAPP-------KRGFASSAHHDDAYETAKWEKITYLGIATCT 55
+RS +++A RR + S P R A+ HH A + W K++Y + C
Sbjct: 14 LRSAPVRSAFQRRFNGTDSKLPWMVDNEFNRERAAVKHHAAA-TSDLWRKLSY-AVVPCL 71
Query: 56 VLA---FYNLSKGH-------PHYEEPPRYEYLHIRNKEFPWGPDG 91
+LA YNL H P EE Y Y +IR K F WG DG
Sbjct: 72 ILAGLNAYNLWNEHWEHWEHMPPLEERVEYPYQNIRVKNFAWG-DG 116
>gi|298160948|ref|NP_001177150.1| cytochrome c oxidase subunit VIa polypeptide 1 [Sus scrofa]
Length = 109
Score = 34.3 bits (77), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 25 KRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFYNL-SKGHPHYEEPPR---YEYLHI 80
+R +SSAH ++ W+ +TY ++ N+ K H EE P Y +L I
Sbjct: 21 RRPMSSSAHGEEG-SARMWKTLTYFVALPGVGVSMLNVFLKSHHAEEERPEFVPYPHLRI 79
Query: 81 RNKEFPWGPDG 91
R+K FPWG DG
Sbjct: 80 RSKPFPWG-DG 89
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,742,656,847
Number of Sequences: 23463169
Number of extensions: 65175863
Number of successful extensions: 121675
Number of sequences better than 100.0: 271
Number of HSP's better than 100.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 215
Number of HSP's that attempted gapping in prelim test: 121540
Number of HSP's gapped (non-prelim): 273
length of query: 100
length of database: 8,064,228,071
effective HSP length: 69
effective length of query: 31
effective length of database: 6,445,269,410
effective search space: 199803351710
effective search space used: 199803351710
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)