BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034239
(100 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3GNO|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase
pdb|3GNP|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-Glucosidase
With Octyl-Beta- D-Thio-Glucoside
pdb|3GNR|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase
With Covalently Bound 2-deoxy-2-fluoroglucoside To The
Catalytic Nucleophile E396
Length = 488
Score = 60.5 bits (145), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/40 (65%), Positives = 31/40 (77%)
Query: 49 GSTRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFA 88
G TR SFP F+FGTAS+AYQYEGA GR +++WDTFA
Sbjct: 11 GLTRGSFPEGFVFGTASAAYQYEGAVKEDGRGQTIWDTFA 50
>pdb|3SCW|A Chain A, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCW|B Chain B, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 49 GSTRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGD 94
G +R +FP F+FGT +SAYQ EG A GGR S+WD FA PG+
Sbjct: 14 GLSRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFA-HTPGN 58
>pdb|2RGL|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGL|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
Length = 481
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 49 GSTRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGD 94
G +R +FP F+FGT +SAYQ EG A GGR S+WD FA PG+
Sbjct: 14 GLSRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFA-HTPGN 58
>pdb|3SCP|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCP|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCQ|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCQ|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 49 GSTRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGD 94
G +R +FP F+FGT +SAYQ EG A GGR S+WD FA PG+
Sbjct: 14 GLSRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFA-HTPGN 58
>pdb|3SCV|A Chain A, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCV|B Chain B, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 49 GSTRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGD 94
G +R +FP F+FGT +SAYQ EG A GGR S+WD FA PG+
Sbjct: 14 GLSRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFA-HTPGN 58
>pdb|3F4V|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F4V|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3AHT|A Chain A, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHT|B Chain B, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHV|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
pdb|3AHV|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
Length = 481
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 49 GSTRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGD 94
G +R +FP F+FGT +SAYQ EG A GGR S+WD FA PG+
Sbjct: 14 GLSRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFA-HTPGN 58
>pdb|3SCN|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCN|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCO|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCO|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCT|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCT|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCU|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
pdb|3SCU|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
Length = 481
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 49 GSTRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGD 94
G +R +FP F+FGT +SAYQ EG A GGR S+WD FA PG+
Sbjct: 14 GLSRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFA-HTPGN 58
>pdb|3SCR|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCR|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCS|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCS|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 49 GSTRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGD 94
G +R +FP F+FGT +SAYQ EG A GGR S+WD FA PG+
Sbjct: 14 GLSRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFA-HTPGN 58
>pdb|4A3Y|A Chain A, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
pdb|4A3Y|B Chain B, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
Length = 540
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%)
Query: 51 TRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQP 92
+R+ FP +F+ GT SSAYQ EG A GGR S+WDTF +P
Sbjct: 18 SRSDFPADFIMGTGSSAYQIEGGARDGGRGPSIWDTFTHRRP 59
>pdb|4ATD|A Chain A, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATD|B Chain B, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATL|A Chain A, Crystal Structure Of Raucaffricine Glucosidase In
Complex With Glucose
pdb|4ATL|B Chain B, Crystal Structure Of Raucaffricine Glucosidase In
Complex With Glucose
Length = 513
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%)
Query: 51 TRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQP 92
+R+ FP +F+ GT SSAYQ EG A GGR S+WDTF +P
Sbjct: 18 SRSDFPADFIMGTGSSAYQIEGGARDGGRGPSIWDTFTHRRP 59
>pdb|3U57|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U57|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|4EK7|A Chain A, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
pdb|4EK7|B Chain B, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
Length = 513
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%)
Query: 51 TRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQP 92
+R+ FP +F+ GT SSAYQ EG A GGR S+WDTF +P
Sbjct: 18 SRSDFPADFIMGTGSSAYQIEGGARDGGRGPSIWDTFTHRRP 59
>pdb|1CBG|A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase
From White Clover (Trifolium Repens L.), A Family 1
Glycosyl-Hydrolase
Length = 490
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 29/42 (69%)
Query: 51 TRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQP 92
R+ F P F+FGTASSA+QYEGAA G+ S+WDTF P
Sbjct: 15 NRSCFAPGFVFGTASSAFQYEGAAFEDGKGPSIWDTFTHKYP 56
>pdb|1UYQ|A Chain A, Mutated B-Glucosidase A From Paenibacillus Polymyxa
Showing Increased Stability
Length = 447
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 55 FPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGDQFLSPN 100
FP +F++GTA++AYQ EGA GR S+WDTFA PG F N
Sbjct: 5 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFA-HTPGKVFNGDN 49
>pdb|1E4I|A Chain A, 2-Deoxy-2-Fluoro-Beta-D-GlucosylENZYME INTERMEDIATE
Complex Of The Beta-Glucosidase From Bacillus Polymyxa
Length = 447
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 54 SFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGDQFLSPN 100
FP +F++GTA++AYQ EGA GR S+WDTFA PG F N
Sbjct: 4 QFPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAH-TPGKVFNGDN 49
>pdb|1TR1|A Chain A, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|B Chain B, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|C Chain C, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|D Chain D, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
Length = 447
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 54 SFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGDQFLSPN 100
FP +F++GTA++AYQ EGA GR S+WDTFA PG F N
Sbjct: 4 QFPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAH-TPGKVFNGDN 49
>pdb|1BGG|A Chain A, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|B Chain B, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|C Chain C, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|D Chain D, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
Length = 448
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 54 SFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGDQFLSPN 100
FP +F++GTA++AYQ EGA GR S+WDTFA PG F N
Sbjct: 5 QFPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAH-TPGKVFNGDN 50
>pdb|1BGA|A Chain A, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|B Chain B, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|C Chain C, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|D Chain D, Beta-Glucosidase A From Bacillus Polymyxa
Length = 447
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 54 SFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGDQFLSPN 100
FP +F++GTA++AYQ EGA GR S+WDTFA PG F N
Sbjct: 4 QFPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAH-TPGKVFNGDN 49
>pdb|2JF6|A Chain A, Structure Of Inactive Mutant Of Strictosidine
Glucosidase In Complex With Strictosidine
pdb|2JF6|B Chain B, Structure Of Inactive Mutant Of Strictosidine
Glucosidase In Complex With Strictosidine
pdb|2JF7|A Chain A, Structure Of Strictosidine Glucosidase
pdb|2JF7|B Chain B, Structure Of Strictosidine Glucosidase
Length = 532
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 25/42 (59%)
Query: 52 RNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPG 93
R FP +F+FG SAYQ EGA + G R S+WDTF P
Sbjct: 40 RRDFPQDFIFGAGGSAYQCEGAYNEGNRGPSIWDTFTQRSPA 81
>pdb|1GNX|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GNX|B Chain B, B-Glucosidase From Streptomyces Sp
pdb|1GON|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GON|B Chain B, B-Glucosidase From Streptomyces Sp
Length = 479
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 27/35 (77%)
Query: 54 SFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFA 88
+FP FL+G+A+++YQ EGAA GR S+WDT+A
Sbjct: 17 TFPEGFLWGSATASYQIEGAAAEDGRTPSIWDTYA 51
>pdb|1V03|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 52 RNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQP 92
R+ FPP FLFG A+SAYQ EGA + G+ S WD F + P
Sbjct: 73 RDWFPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCHNFP 113
>pdb|1V02|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|B Chain B, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|C Chain C, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|D Chain D, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|F Chain F, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 52 RNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQP 92
R+ FPP FLFG A+SAYQ EGA + G+ S WD F + P
Sbjct: 73 RDWFPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCHNFP 113
>pdb|1V02|E Chain E, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 52 RNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQP 92
R+ FPP FLFG A+SAYQ EGA + G+ S WD F + P
Sbjct: 73 RDWFPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCHNFP 113
>pdb|2O9R|A Chain A, Beta-Glucosidase B Complexed With Thiocellobiose
Length = 452
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 55 FPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTF 87
FP F++GT++S+YQ EG GGR S+WDTF
Sbjct: 12 FPATFMWGTSTSSYQIEGGTDEGGRTPSIWDTF 44
>pdb|2O9P|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa
pdb|2O9T|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
Glucose
pdb|2Z1S|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa Complexed
With Cellotetraose
Length = 454
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 55 FPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTF 87
FP F++GT++S+YQ EG GGR S+WDTF
Sbjct: 14 FPATFMWGTSTSSYQIEGGTDEGGRTPSIWDTF 46
>pdb|2JIE|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
2- F-Glucose
Length = 454
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 55 FPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTF 87
FP F++GT++S+YQ EG GGR S+WDTF
Sbjct: 14 FPATFMWGTSTSSYQIEGGTDEGGRTPSIWDTF 46
>pdb|1QOX|A Chain A, Beta-Glucosidase From Bacillus Circulans Sp.
Alkalophilus
pdb|1QOX|B Chain B, Beta-Glucosidase From Bacillus Circulans Sp.
Alkalophilus
pdb|1QOX|C Chain C, Beta-Glucosidase From Bacillus Circulans Sp.
Alkalophilus
pdb|1QOX|D Chain D, Beta-Glucosidase From Bacillus Circulans Sp.
Alkalophilus
pdb|1QOX|E Chain E, Beta-Glucosidase From Bacillus Circulans Sp.
Alkalophilus
pdb|1QOX|F Chain F, Beta-Glucosidase From Bacillus Circulans Sp.
Alkalophilus
pdb|1QOX|G Chain G, Beta-Glucosidase From Bacillus Circulans Sp.
Alkalophilus
pdb|1QOX|H Chain H, Beta-Glucosidase From Bacillus Circulans Sp.
Alkalophilus
pdb|1QOX|I Chain I, Beta-Glucosidase From Bacillus Circulans Sp.
Alkalophilus
pdb|1QOX|J Chain J, Beta-Glucosidase From Bacillus Circulans Sp.
Alkalophilus
pdb|1QOX|K Chain K, Beta-Glucosidase From Bacillus Circulans Sp.
Alkalophilus
pdb|1QOX|L Chain L, Beta-Glucosidase From Bacillus Circulans Sp.
Alkalophilus
pdb|1QOX|M Chain M, Beta-Glucosidase From Bacillus Circulans Sp.
Alkalophilus
pdb|1QOX|N Chain N, Beta-Glucosidase From Bacillus Circulans Sp.
Alkalophilus
pdb|1QOX|O Chain O, Beta-Glucosidase From Bacillus Circulans Sp.
Alkalophilus
pdb|1QOX|P Chain P, Beta-Glucosidase From Bacillus Circulans Sp.
Alkalophilus
Length = 449
Score = 45.4 bits (106), Expect = 8e-06, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 55 FPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFA 88
FP +F +G A++AYQ EGA + GR S+WDTFA
Sbjct: 5 FPSDFKWGVATAAYQIEGAYNEDGRGMSIWDTFA 38
>pdb|1HXJ|A Chain A, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
pdb|1HXJ|B Chain B, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
Length = 507
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 52 RNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQP 92
R+ FP +F FG A+SAYQ EGA + G+ S WD F + P
Sbjct: 16 RDWFPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCHNHP 56
>pdb|1H49|A Chain A, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
pdb|1H49|B Chain B, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
Length = 512
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 52 RNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQP 92
R+ FP +F FG A+SAYQ EGA + G+ S WD F + P
Sbjct: 21 RDWFPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCHNHP 61
>pdb|1E4L|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4L|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4N|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With
The Natural Aglycone Dimboa
pdb|1E4N|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With
The Natural Aglycone Dimboa
pdb|1E55|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E55|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E56|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1E56|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1V08|A Chain A, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
pdb|1V08|B Chain B, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
Length = 512
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 52 RNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQP 92
R+ FP +F FG A+SAYQ EGA + G+ S WD F + P
Sbjct: 21 RDWFPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCHNHP 61
>pdb|1E1E|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1E|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1F|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
pdb|1E1F|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
Length = 512
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 52 RNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQP 92
R+ FP +F FG A+SAYQ EGA + G+ S WD F + P
Sbjct: 21 RDWFPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCHNHP 61
>pdb|1NP2|A Chain A, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
pdb|1NP2|B Chain B, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
Length = 436
Score = 44.3 bits (103), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 58 EFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPG 93
+FL+G A+SAYQ EGA GR S+WDTFA +PG
Sbjct: 7 KFLWGVATSAYQIEGATQEDGRGPSIWDTFAR-RPG 41
>pdb|3AHX|A Chain A, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|B Chain B, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|C Chain C, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|D Chain D, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
Length = 453
Score = 43.9 bits (102), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 55 FPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFA 88
FP +F+FGTA++AYQ EGA + S+WD F+
Sbjct: 6 FPKDFIFGTATAAYQIEGAYKEDEKGESIWDRFS 39
>pdb|3PTK|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.)
Os4bglu12
pdb|3PTK|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.)
Os4bglu12
pdb|3PTM|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.)
Os4bglu12 With 2- Fluoroglucopyranoside
pdb|3PTM|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.)
Os4bglu12 With 2- Fluoroglucopyranoside
pdb|3PTQ|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.)
Os4bglu12 With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
pdb|3PTQ|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.)
Os4bglu12 With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
Length = 505
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 30/42 (71%)
Query: 51 TRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQP 92
+R SFP F+FGTASS+YQYEG A GGR S+WDTF P
Sbjct: 30 SRRSFPKGFIFGTASSSYQYEGGAAEGGRGPSIWDTFTHQHP 71
>pdb|3TA9|A Chain A, Beta-Glucosidase A From The Halothermophile H. Orenii
pdb|3TA9|B Chain B, Beta-Glucosidase A From The Halothermophile H. Orenii
Length = 458
Score = 43.1 bits (100), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 55 FPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPG 93
FP +F++G A+S+YQ EGA + G+ S+WD F+ PG
Sbjct: 13 FPEDFIWGAATSSYQIEGAFNEDGKGESIWDRFS-HTPG 50
>pdb|3ZJK|A Chain A, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|B Chain B, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|C Chain C, Crystal Structure Of Ttb-gly F401s Mutant
Length = 431
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 58 EFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPG 93
+FL+G A+SAYQ EGA GR S+WD FA +PG
Sbjct: 7 KFLWGVATSAYQIEGATQEDGRGPSIWDAFA-QRPG 41
>pdb|1UG6|A Chain A, Structure Of Beta-Glucosidase At Atomic Resolution From
Thermus Thermophilus Hb8
Length = 431
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 58 EFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPG 93
+FL+G A+SAYQ EGA GR S+WD FA +PG
Sbjct: 7 KFLWGVATSAYQIEGATQEDGRGPSIWDAFA-QRPG 41
>pdb|1PBG|A Chain A, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|1PBG|B Chain B, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|3PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-C
pdb|3PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-C
Length = 468
Score = 42.7 bits (99), Expect = 6e-05, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 54 SFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMD 90
+ P +F+FG A++AYQ EGA H G+ WD + D
Sbjct: 4 TLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLED 40
>pdb|2PBG|A Chain A, 6-Phospho-Beta-D-Galactosidase Form-B
Length = 468
Score = 42.4 bits (98), Expect = 6e-05, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 54 SFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMD 90
+ P +F+FG A++AYQ EGA H G+ WD + D
Sbjct: 4 TLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLED 40
>pdb|4PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-Cst
pdb|4PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-Cst
Length = 468
Score = 42.4 bits (98), Expect = 6e-05, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 54 SFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMD 90
+ P +F+FG A++AYQ EGA H G+ WD + D
Sbjct: 4 TLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLED 40
>pdb|3AI0|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With
Para-Nitrophenyl-Beta-D-Glucopyranoside
pdb|3VIM|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIN|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIO|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIP|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
Length = 487
Score = 42.0 bits (97), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 54 SFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQP 92
+FP EF G A+++YQ EGA G+ ++WDT + P
Sbjct: 11 TFPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHP 49
>pdb|3AHZ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Tris
pdb|3VIF|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Gluconolactone
pdb|3VIG|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With
1-Deoxynojirimycin
pdb|3VIH|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glycerol
pdb|3VII|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Bis-Tris
Length = 487
Score = 42.0 bits (97), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 54 SFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQP 92
+FP EF G A+++YQ EGA G+ ++WDT + P
Sbjct: 11 TFPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHP 49
>pdb|3VIK|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Cellobiose
pdb|3VIL|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Salicin
Length = 487
Score = 42.0 bits (97), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 54 SFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQP 92
+FP EF G A+++YQ EGA G+ ++WDT + P
Sbjct: 11 TFPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHP 49
>pdb|3VIJ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glucose
Length = 487
Score = 42.0 bits (97), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 54 SFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQP 92
+FP EF G A+++YQ EGA G+ ++WDT + P
Sbjct: 11 TFPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHP 49
>pdb|4HZ6|A Chain A, Crystal Structure Of Bglb
pdb|4HZ7|A Chain A, Crystal Structure Of Bglb With Glucose
pdb|4HZ8|A Chain A, Crystal Structure Of Bglb With Natural Substrate
Length = 444
Score = 41.2 bits (95), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 55 FPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTF 87
FP FL+G A+S+YQ EGA + G+ S+WD F
Sbjct: 5 FPEGFLWGAATSSYQIEGAWNEDGKGESIWDRF 37
>pdb|3CMJ|A Chain A, Crystal Structure Of Engineered Beta-Glucosidase From
Soil Metagenome
Length = 465
Score = 41.2 bits (95), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 55 FPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTF 87
FP FL+G A+S+YQ EGA + G+ S+WD F
Sbjct: 26 FPEGFLWGAATSSYQIEGAWNEDGKGESIWDRF 58
>pdb|2E3Z|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E3Z|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E40|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
pdb|2E40|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
Length = 465
Score = 40.8 bits (94), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 55 FPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTF 87
P F++G A++AYQ EG+ GR+ S+WDTF
Sbjct: 9 LPKSFVWGYATAAYQIEGSPDKDGREPSIWDTF 41
>pdb|3AHY|A Chain A, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|B Chain B, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|C Chain C, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|D Chain D, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
Length = 473
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 55 FPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPG 93
P +F +G A++AYQ EGA GR S+WDTF QPG
Sbjct: 9 LPKDFQWGFATAAYQIEGAVDQDGRGPSIWDTFCA-QPG 46
>pdb|1WCG|A Chain A, Aphid Myrosinase
pdb|1WCG|B Chain B, Aphid Myrosinase
Length = 464
Score = 40.4 bits (93), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 55 FPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQP 92
FP +F+FGT++++YQ EG + G+ ++WD P
Sbjct: 5 FPKDFMFGTSTASYQIEGGWNEDGKGENIWDRLVHTSP 42
>pdb|3AIS|A Chain A, Crystal Structure Of A Mutant Beta-Glucosidase In Wheat
Complexed With Dimboa-Glc
Length = 565
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 52 RNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQP 92
R+ F +FLFG ++SAYQ EGA + G+ S WD F P
Sbjct: 71 RDWFDKDFLFGASTSAYQIEGAWNEDGKGPSTWDHFCHTYP 111
>pdb|2DGA|A Chain A, Crystal Structure Of Hexameric Beta-Glucosidase In Wheat
pdb|3AIQ|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With An Aglycone Dimboa
pdb|3AIR|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With 2-Deoxy- 2-Fluoroglucoside And Dinitrophenol
Length = 565
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 52 RNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQP 92
R+ F +FLFG ++SAYQ EGA + G+ S WD F P
Sbjct: 71 RDWFDKDFLFGASTSAYQIEGAWNEDGKGPSTWDHFCHTYP 111
>pdb|3AIU|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye
pdb|3AIV|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With An Aglycone Dimboa
pdb|3AIW|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With 2-Deoxy-2- Fluoroglucoside And Dinitrophenol
Length = 564
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 52 RNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQP 92
R+ F +FLFG ++SAYQ EGA + G+ S WD F P
Sbjct: 71 RDWFSKDFLFGASTSAYQIEGAWNEDGKGPSTWDHFCHTYP 111
>pdb|1MYR|A Chain A, Myrosinase From Sinapis Alba
Length = 501
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 43 VCLPCYGSTRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQP 92
C G +SF +F+FG ASSAYQ EG GR ++WD F P
Sbjct: 13 TCGNTDGLNSSSFEADFIFGVASSAYQIEGTI---GRGLNIWDGFTHRYP 59
>pdb|1OD0|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OD0|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIF|A Chain A, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIF|B Chain B, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIM|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIM|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1W3J|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In
Complex With Tetrahydrooxazine
pdb|1W3J|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In
Complex With Tetrahydrooxazine
pdb|1UZ1|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In
Complex With Isofagomine Lactam
pdb|1UZ1|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In
Complex With Isofagomine Lactam
pdb|2CBU|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex
With Castanospermine
pdb|2CBU|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex
With Castanospermine
pdb|2CBV|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex
With Calystegine B2
pdb|2CBV|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex
With Calystegine B2
pdb|2CES|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex
With Glucoimidazole
pdb|2CES|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex
With Glucoimidazole
pdb|2CET|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex
With Phenethyl-Substituted Glucoimidazole
pdb|2CET|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex
With Phenethyl-Substituted Glucoimidazole
pdb|2J77|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex
With Deoxynojirimycin
pdb|2J77|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex
With Deoxynojirimycin
pdb|2J78|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex
With Gluco-Hydroximolactam
pdb|2J78|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex
With Gluco-Hydroximolactam
pdb|2J79|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex
With Galacto-Hydroximolactam
pdb|2J79|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex
With Galacto-Hydroximolactam
pdb|2J7B|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex
With Gluco-Tetrazole
pdb|2J7B|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex
With Gluco-Tetrazole
pdb|2J7C|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex
With Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7C|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex
With Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7D|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex
With Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7D|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex
With Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7E|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex
With Methyl Acetate-Substituted Glucoimidazole
pdb|2J7E|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex
With Methyl Acetate-Substituted Glucoimidazole
pdb|2J7F|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex
With Carboxylate-substituted Glucoimidazole
pdb|2J7F|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex
With Carboxylate-substituted Glucoimidazole
pdb|2J7G|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex
With Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7G|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex
With Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7H|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex
With Azafagomine
pdb|2J7H|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex
With Azafagomine
pdb|2J75|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex
With Noeuromycin
pdb|2J75|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex
With Noeuromycin
pdb|2JAL|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex
With Cyclophellitol
pdb|2JAL|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex
With Cyclophellitol
pdb|2VRJ|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex
With N-
Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2VRJ|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex
With N-
Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2WBG|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WC3|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC4|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
Length = 468
Score = 38.5 bits (88), Expect = 0.001, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 49 GSTRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGD 94
S FP FL+G A+++YQ EG+ G S+W TF+ PG+
Sbjct: 22 ASNVKKFPEGFLWGVATASYQIEGSPLADGAGMSIWHTFS-HTPGN 66
>pdb|4GXP|A Chain A, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|B Chain B, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|C Chain C, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
Length = 467
Score = 37.4 bits (85), Expect = 0.002, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 55 FPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGD 94
FP FL+G A+++YQ EG+ G S+W TF+ PG+
Sbjct: 13 FPEGFLWGVATASYQIEGSPLADGAGMSIWHTFS-HTPGN 51
>pdb|2ZOX|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase
pdb|3VKK|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase-Mannose Complex
Length = 469
Score = 33.1 bits (74), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 54 SFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFA 88
+FP F + A++AYQ EG G+ VWDTF
Sbjct: 2 AFPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFT 36
>pdb|2E9L|A Chain A, Crystal Structure Of Human Cytosolic Neutral
Beta-Glycosylceramidase (Klotho-Related Prote:klrp)
Complex With Glucose And Fatty Acids
pdb|2E9M|A Chain A, Crystal Structure Of Human Cytosolic Neutral Beta-
Glycosylceramidase (Klotho-Related Prote:klrp) Complex
With Galactose And Fatty Acids
Length = 469
Score = 33.1 bits (74), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 54 SFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFA 88
+FP F + A++AYQ EG G+ VWDTF
Sbjct: 2 AFPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFT 36
>pdb|2JFE|X Chain X, The Crystal Structure Of Human Cytosolic
Beta-Glucosidase
Length = 469
Score = 33.1 bits (74), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 54 SFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFA 88
+FP F + A++AYQ EG G+ VWDTF
Sbjct: 2 AFPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFT 36
>pdb|1VFF|A Chain A, Beta-Glycosidase From Pyrococcus Horikoshii
Length = 423
Score = 30.4 bits (67), Expect = 0.25, Method: Composition-based stats.
Identities = 12/18 (66%), Positives = 15/18 (83%)
Query: 55 FPPEFLFGTASSAYQYEG 72
FP FLFGTA+S++Q EG
Sbjct: 5 FPEMFLFGTATSSHQIEG 22
>pdb|4F79|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase
Mutant (E375q) In Complex With Salicin 6-Phosphate
pdb|4GPN|A Chain A, The Crystal Structure Of 6-P-Beta-D-Glucosidase (E375q
Mutant) From Streptococcus Mutans Ua150 In Complex With
Gentiobiose 6-Phosphate.
pdb|4GPN|B Chain B, The Crystal Structure Of 6-P-Beta-D-Glucosidase (E375q
Mutant) From Streptococcus Mutans Ua150 In Complex With
Gentiobiose 6-Phosphate
Length = 480
Score = 30.4 bits (67), Expect = 0.27, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 53 NSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPG 93
+ P FL+G A +A+Q EG GG+ SV D + G
Sbjct: 5 SKLPENFLWGGAVAAHQLEGGWQEGGKGISVADVMTAGRHG 45
>pdb|4F66|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159 In Complex With
Beta-D-Glucose-6-Phosphate.
pdb|4F66|B Chain B, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159 In Complex With
Beta-D-Glucose-6-Phosphate
Length = 480
Score = 30.4 bits (67), Expect = 0.27, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 53 NSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPG 93
+ P FL+G A +A+Q EG GG+ SV D + G
Sbjct: 5 SKLPENFLWGGAVAAHQLEGGWQEGGKGISVADVMTAGRHG 45
>pdb|3PN8|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159
pdb|3PN8|B Chain B, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159
Length = 480
Score = 30.0 bits (66), Expect = 0.38, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 53 NSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPG 93
+ P FL+G A +A+Q EG GG+ SV D + G
Sbjct: 5 SKLPENFLWGGAVAAHQLEGGWQEGGKGISVADVXTAGRHG 45
>pdb|2XHY|A Chain A, Crystal Structure Of E.Coli Bgla
pdb|2XHY|B Chain B, Crystal Structure Of E.Coli Bgla
pdb|2XHY|C Chain C, Crystal Structure Of E.Coli Bgla
pdb|2XHY|D Chain D, Crystal Structure Of E.Coli Bgla
Length = 479
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 54 SFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFA 88
+ P +FL+G A +A+Q EG + GG+ S+ D
Sbjct: 7 TLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLT 41
>pdb|1DWA|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part
1: Structure Prior To Irradiation
pdb|1DWF|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part
2: Structure After Irradiation With 9.110e15 PhotonsMM2
pdb|1DWG|M Chain M, Study On Radiation Damage On A Cryocooled Crystal: Part
3 Structure After Irradiation With 18.210e15
PhotonsMM2.
pdb|1DWH|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part
4: Structure After Irradiation With 27.210e15
PhotonsMM2
pdb|1DWI|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part
5: Structure After Irradiation With 54.010e15
PhotonsMM2
pdb|1DWJ|M Chain M, Study On Radiation Damage On A Cryocooled Crystal.
Refined Part 6: Structure After A Radiation Dose Of
5410e15 PhotonsMM2
Length = 499
Score = 28.5 bits (62), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Query: 62 GTASSAYQYEGAAHIGGRKRSVWDTFAMDQP 92
G ASSAYQ EG GR ++WD F P
Sbjct: 30 GVASSAYQIEGTI---GRGLNIWDGFTHRYP 57
>pdb|1E6Q|M Chain M, Myrosinase From Sinapis Alba With The Bound Transition
State Analogue Gluco-Tetrazole
pdb|1E6X|M Chain M, Myrosinase From Sinapis Alba With A Bound Transition
State Analogue,D-Glucono-1,5-Lactone
pdb|1E70|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba
pdb|1E71|M Chain M, Myrosinase From Sinapis Alba With Bound Ascorbate
pdb|1E72|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate Or Ascorbate
pdb|1E73|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba With Bound
L-Ascorbate
pdb|1E6S|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate
pdb|1E4M|M Chain M, Myrosinase From Sinapis Alba
pdb|1W9B|M Chain M, S. Alba Myrosinase In Complex With Carba-Glucotropaeolin
pdb|1W9D|M Chain M, S. Alba Myrosinase In Complex With S-Ethyl
Phenylacetothiohydroximate-O-Sulfate
pdb|2WXD|M Chain M, A Micromolar O-Sulfated Thiohydroximate Inhibitor Bound
To Plant Myrosinase
Length = 501
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Query: 62 GTASSAYQYEGAAHIGGRKRSVWDTFAMDQP 92
G ASSAYQ EG GR ++WD F P
Sbjct: 32 GVASSAYQIEGTI---GRGLNIWDGFTHRYP 59
>pdb|2X2H|A Chain A, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase
pdb|2X2H|B Chain B, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase
pdb|2X2H|C Chain C, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase
pdb|2X2H|D Chain D, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase
pdb|2X2I|A Chain A, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Acarbose
pdb|2X2I|B Chain B, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Acarbose
pdb|2X2I|C Chain C, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Acarbose
pdb|2X2I|D Chain D, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Acarbose
pdb|2X2J|A Chain A, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Deoxynojirimycin
pdb|2X2J|B Chain B, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Deoxynojirimycin
pdb|2X2J|C Chain C, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Deoxynojirimycin
pdb|2X2J|D Chain D, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Deoxynojirimycin
Length = 1027
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 6 YIIHRKGEVGM----GSWRVEVKFQNLFVCYLITSSICLSSVCLPCYGSTRNSF 55
YII R G +G G W + + ++ +I ++I ++ CLP GS F
Sbjct: 634 YIISRGGYIGNQHFGGMWVGDNSTTSNYIQMMIANNINMNMSCLPLVGSDIGGF 687
>pdb|1ZR5|A Chain A, Crystal Structure Of The Macro-Domain Of Human Core
Histone Variant Macroh2a1.2
pdb|1ZR5|B Chain B, Crystal Structure Of The Macro-Domain Of Human Core
Histone Variant Macroh2a1.2
Length = 214
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 31 CYLITSSICLSSVCLPCYGSTRNSFPPE 58
C + L S+ P GS RN FP +
Sbjct: 139 CLALADDKKLKSIAFPSIGSGRNGFPKQ 166
>pdb|1ZR3|A Chain A, Crystal Structure Of The Macro-Domain Of Human Core
Histone Variant Macroh2a1.1 (Form B)
pdb|1ZR3|B Chain B, Crystal Structure Of The Macro-Domain Of Human Core
Histone Variant Macroh2a1.1 (Form B)
pdb|1ZR3|C Chain C, Crystal Structure Of The Macro-Domain Of Human Core
Histone Variant Macroh2a1.1 (Form B)
pdb|1ZR3|D Chain D, Crystal Structure Of The Macro-Domain Of Human Core
Histone Variant Macroh2a1.1 (Form B)
pdb|2FXK|A Chain A, Crystal Structure Of The Macro-Domain Of Human Core
Histone Variant Macroh2a1.1 (Form A)
pdb|2FXK|B Chain B, Crystal Structure Of The Macro-Domain Of Human Core
Histone Variant Macroh2a1.1 (Form A)
pdb|3IID|A Chain A, Crystal Structure Of The Macro Domain Of Human Histone
Macroh2a1.1 In Complex With Adp-Ribose (Form A)
pdb|3IIF|A Chain A, Crystal Structure Of The Macro Domain Of Human Histone
Macroh2a1.1 In Complex With Adp-Ribose (Form B)
pdb|3IIF|B Chain B, Crystal Structure Of The Macro Domain Of Human Histone
Macroh2a1.1 In Complex With Adp-Ribose (Form B)
pdb|3IIF|C Chain C, Crystal Structure Of The Macro Domain Of Human Histone
Macroh2a1.1 In Complex With Adp-Ribose (Form B)
Length = 211
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 31 CYLITSSICLSSVCLPCYGSTRNSFPPE 58
C + L S+ P GS RN FP +
Sbjct: 136 CLALADDKKLKSIAFPSIGSGRNGFPKQ 163
>pdb|2X11|A Chain A, Crystal Structure Of The Complete Epha2 Ectodomain In
Complex With Ephrin A5 Receptor Binding Domain
Length = 545
Score = 26.2 bits (56), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 10/78 (12%)
Query: 3 KLPYIIHRKGEVGMGSWRVEVKFQ-------NLFVCYLITSSICL--SSVCLPCYGSTRN 53
+ P H VGMG+ +VE+++ + Y +T C S C PC S R
Sbjct: 329 RPPSAPHYLTAVGMGA-KVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRY 387
Query: 54 SFPPEFLFGTASSAYQYE 71
S PP L T+ + E
Sbjct: 388 SEPPHGLTRTSVTVSDLE 405
>pdb|3FL7|A Chain A, Crystal Structure Of The Human Ephrin A2 Ectodomain
Length = 536
Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 10/78 (12%)
Query: 3 KLPYIIHRKGEVGMGSWRVEVKFQ-------NLFVCYLITSSICL--SSVCLPCYGSTRN 53
+ P H VGMG+ +VE+++ + Y +T C S C PC S R
Sbjct: 332 RPPSAPHYLTAVGMGA-KVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRY 390
Query: 54 SFPPEFLFGTASSAYQYE 71
S PP L T+ + E
Sbjct: 391 SEPPHGLTRTSVTVSDLE 408
>pdb|3MX0|A Chain A, Crystal Structure Of Epha2 Ectodomain In Complex With
Ephrin-A5
pdb|3MX0|C Chain C, Crystal Structure Of Epha2 Ectodomain In Complex With
Ephrin-A5
Length = 409
Score = 25.8 bits (55), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 10/78 (12%)
Query: 3 KLPYIIHRKGEVGMGSWRVEVKFQ-------NLFVCYLITSSICL--SSVCLPCYGSTRN 53
+ P H VGMG+ +VE+++ + Y +T C S C PC S R
Sbjct: 301 RPPSAPHYLTAVGMGA-KVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRY 359
Query: 54 SFPPEFLFGTASSAYQYE 71
S PP L T+ + E
Sbjct: 360 SEPPHGLTRTSVTVSDLE 377
>pdb|1YD9|A Chain A, 1.6a Crystal Structure Of The Non-Histone Domain Of The
Histone Variant Macroh2a1.1.
pdb|1YD9|B Chain B, 1.6a Crystal Structure Of The Non-Histone Domain Of The
Histone Variant Macroh2a1.1.
pdb|1YD9|C Chain C, 1.6a Crystal Structure Of The Non-Histone Domain Of The
Histone Variant Macroh2a1.1.
pdb|1YD9|D Chain D, 1.6a Crystal Structure Of The Non-Histone Domain Of The
Histone Variant Macroh2a1.1
Length = 193
Score = 25.8 bits (55), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 31 CYLITSSICLSSVCLPCYGSTRNSFPPE 58
C + L S+ P GS RN FP +
Sbjct: 118 CLALADDRKLKSIAFPSIGSGRNGFPKQ 145
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.138 0.451
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,178,844
Number of Sequences: 62578
Number of extensions: 111172
Number of successful extensions: 258
Number of sequences better than 100.0: 74
Number of HSP's better than 100.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 193
Number of HSP's gapped (non-prelim): 74
length of query: 100
length of database: 14,973,337
effective HSP length: 66
effective length of query: 34
effective length of database: 10,843,189
effective search space: 368668426
effective search space used: 368668426
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 45 (21.9 bits)