Query 034239
Match_columns 100
No_of_seqs 147 out of 1241
Neff 4.8
Searched_HMMs 46136
Date Fri Mar 29 11:18:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034239.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/034239hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0626 Beta-glucosidase, lact 99.6 2.7E-15 5.9E-20 126.6 5.4 56 43-98 25-80 (524)
2 PLN02849 beta-glucosidase 99.5 2.9E-14 6.3E-19 119.3 3.4 58 28-89 7-64 (503)
3 PF00232 Glyco_hydro_1: Glycos 99.4 3.8E-14 8.3E-19 116.0 2.1 46 53-99 3-48 (455)
4 PRK15014 6-phospho-beta-glucos 99.4 1.2E-13 2.6E-18 114.8 2.7 44 52-95 3-49 (477)
5 PLN02998 beta-glucosidase 99.4 2.2E-13 4.9E-18 113.9 2.4 41 49-89 25-65 (497)
6 PRK09852 cryptic 6-phospho-bet 99.4 2.6E-13 5.7E-18 112.9 2.3 41 54-95 3-43 (474)
7 PRK09589 celA 6-phospho-beta-g 99.3 3.1E-13 6.8E-18 112.3 2.4 42 54-95 3-47 (476)
8 PRK13511 6-phospho-beta-galact 99.3 3.1E-13 6.7E-18 111.8 2.1 42 53-95 3-44 (469)
9 PLN02814 beta-glucosidase 99.3 1.9E-13 4.1E-18 114.5 0.3 41 50-90 23-63 (504)
10 PRK09593 arb 6-phospho-beta-gl 99.3 4.1E-13 8.9E-18 111.6 2.0 42 53-95 4-45 (478)
11 TIGR03356 BGL beta-galactosida 99.3 5.1E-13 1.1E-17 109.3 2.3 43 55-98 1-43 (427)
12 TIGR01233 lacG 6-phospho-beta- 99.3 9.2E-13 2E-17 109.2 2.6 41 53-94 2-42 (467)
13 COG2723 BglB Beta-glucosidase/ 99.3 1.1E-12 2.3E-17 109.7 2.0 45 53-97 2-47 (460)
14 KOG3967 Uncharacterized conser 48.3 11 0.00023 30.4 1.4 22 3-24 102-123 (297)
15 PF13986 DUF4224: Domain of un 20.7 61 0.0013 19.1 1.2 20 2-21 27-46 (47)
No 1
>KOG0626 consensus Beta-glucosidase, lactase phlorizinhydrolase, and related proteins [Carbohydrate transport and metabolism]
Probab=99.56 E-value=2.7e-15 Score=126.62 Aligned_cols=56 Identities=52% Similarity=0.796 Sum_probs=48.2
Q ss_pred ccCCCCCCCCCCCCCCcchhhhhhhhhhcccccCCCCccchhhhhhhcCCCCccCC
Q 034239 43 VCLPCYGSTRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGDQFLS 98 (100)
Q Consensus 43 ~~~~~~~~~~~~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~~~p~~i~d~ 98 (100)
.|.....+.+..||++|+||+||||||+||+++++|||+++||++.|+.|+++.|.
T Consensus 25 ~~~~~~~~~r~~FP~~F~FGtAtSAyQ~EGA~~e~gRg~svWD~f~~~~p~~~~~~ 80 (524)
T KOG0626|consen 25 VCPKTTKFSRADFPKGFLFGTATSAYQVEGAANEDGRGPSVWDTFTHKYPGKICDG 80 (524)
T ss_pred cCcccCcccccCCCCCceeeccchHHHhhhhhccCCCCCchhhhhhccCCcccccC
Confidence 34444456788899999999999999999999999999999999999899765554
No 2
>PLN02849 beta-glucosidase
Probab=99.46 E-value=2.9e-14 Score=119.32 Aligned_cols=58 Identities=43% Similarity=0.737 Sum_probs=46.1
Q ss_pred HHHHHHHHhhhhhhcccCCCCCCCCCCCCCCcchhhhhhhhhhcccccCCCCccchhhhhhh
Q 034239 28 LFVCYLITSSICLSSVCLPCYGSTRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAM 89 (100)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~ 89 (100)
++-.+||++..|..+ ...+.+.+||++|+||+||||||+||+++++|||+|+||++.+
T Consensus 7 ~~~~~~~~~~~~~~~----~~~~~~~~FP~dFlwG~AtsA~QiEGa~~~~Gkg~SiwD~~~~ 64 (503)
T PLN02849 7 LFTIFLLLALSSGKC----SSDYSRSDFPEGFVFGAGTSAYQWEGAFDEDGRKPSVWDTFLH 64 (503)
T ss_pred HHHHHHHHhcccccc----cCCCccccCCCCCEEEeechhhhhcCCcCCCCCcCcceeeeec
Confidence 444455555544222 3446677899999999999999999999999999999999887
No 3
>PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 1 GH1 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3.2.1.21 from EC); beta-galactosidase (3.2.1.23 from EC); 6-phospho-beta-galactosidase (3.2.1.85 from EC); 6-phospho-beta-glucosidase (3.2.1.86 from EC); lactase-phlorizin hydrolase (3.2.1.62 from EC), (3.2.1.108 from EC); beta-mannosidase (3.2.1.25 from EC); myrosinase (3.2.1.147 from EC). ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1QVB_A 3AHY_D 2E9L_A 2ZOX_A 2JFE_X 2E9M_A 3FIZ_A 3FIY_A 3CMJ_A 3FJ0_A ....
Probab=99.43 E-value=3.8e-14 Score=116.02 Aligned_cols=46 Identities=46% Similarity=0.817 Sum_probs=37.7
Q ss_pred CCCCCCcchhhhhhhhhhcccccCCCCccchhhhhhhcCCCCccCCC
Q 034239 53 NSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGDQFLSP 99 (100)
Q Consensus 53 ~~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~~~p~~i~d~~ 99 (100)
.+||++|+||+||||+|+||++.+||||+|+||.+.+ .|+++.++.
T Consensus 3 ~~fp~~F~wG~atsa~Q~EG~~~~dGkg~s~wd~~~~-~~~~~~~~~ 48 (455)
T PF00232_consen 3 KKFPEDFLWGVATSAYQIEGAWNEDGKGPSIWDTFCH-EPGKVEDGS 48 (455)
T ss_dssp GGS-TT-EEEEE--HHHHSSSTTSTTSTTBHHHHHHH-STTSSTTSS
T ss_pred CCCCCCCeEEEeceeccccceecCCCCCccccccccc-ccceeeccc
Confidence 4699999999999999999999999999999999999 577776653
No 4
>PRK15014 6-phospho-beta-glucosidase BglA; Provisional
Probab=99.39 E-value=1.2e-13 Score=114.84 Aligned_cols=44 Identities=32% Similarity=0.559 Sum_probs=38.4
Q ss_pred CCCCCCCcchhhhhhhhhhcccccCCCCccchhhhhh---hcCCCCc
Q 034239 52 RNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFA---MDQPGDQ 95 (100)
Q Consensus 52 ~~~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~---~~~p~~i 95 (100)
+.+||++|+||+||||||+||+++++|||+|+||++. +..|+++
T Consensus 3 ~~~FP~~FlwG~AtsA~QiEGa~~e~Gkg~siwD~~~~~~~~~~~~~ 49 (477)
T PRK15014 3 KLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREI 49 (477)
T ss_pred cCCCCCCCEEeeecHHHHhCCCcCCCCCcccHhhccccccccCcccc
Confidence 4569999999999999999999999999999999988 4345544
No 5
>PLN02998 beta-glucosidase
Probab=99.36 E-value=2.2e-13 Score=113.89 Aligned_cols=41 Identities=56% Similarity=1.010 Sum_probs=38.0
Q ss_pred CCCCCCCCCCcchhhhhhhhhhcccccCCCCccchhhhhhh
Q 034239 49 GSTRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAM 89 (100)
Q Consensus 49 ~~~~~~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~ 89 (100)
.+.+..||++|+||+||||||+||+++++|||+|+||.+.+
T Consensus 25 ~~~~~~FP~~FlwG~AtSA~QvEGa~~~~Gkg~siwD~~~~ 65 (497)
T PLN02998 25 KYSRNDFPPGFVFGSGTSAYQVEGAADEDGRTPSIWDVFAH 65 (497)
T ss_pred cCccccCCCCCEEeeechHHHhCCCcCCCCCccchhhcccc
Confidence 35567799999999999999999999999999999999887
No 6
>PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional
Probab=99.35 E-value=2.6e-13 Score=112.86 Aligned_cols=41 Identities=34% Similarity=0.450 Sum_probs=37.6
Q ss_pred CCCCCcchhhhhhhhhhcccccCCCCccchhhhhhhcCCCCc
Q 034239 54 SFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGDQ 95 (100)
Q Consensus 54 ~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~~~p~~i 95 (100)
+||++|+||+||||||+||+++++|||+|+||++.+ .|+++
T Consensus 3 ~FP~~FlwG~AtsA~QiEGa~~~~Gkg~siwD~~~~-~~~~~ 43 (474)
T PRK09852 3 VFPEGFLWGGALAANQSEGAFREGGKGLTTVDMIPH-GEHRM 43 (474)
T ss_pred CCCCCCEEeccchHhhcCCCcCCCCCCCchhhcccc-CCCcc
Confidence 599999999999999999999999999999999887 46654
No 7
>PRK09589 celA 6-phospho-beta-glucosidase; Reviewed
Probab=99.35 E-value=3.1e-13 Score=112.27 Aligned_cols=42 Identities=36% Similarity=0.497 Sum_probs=37.3
Q ss_pred CCCCCcchhhhhhhhhhcccccCCCCccchhhhhh---hcCCCCc
Q 034239 54 SFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFA---MDQPGDQ 95 (100)
Q Consensus 54 ~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~---~~~p~~i 95 (100)
+||++|+||+||||||+||+++++|||+|+||++. ++.|+++
T Consensus 3 ~fP~~FlwG~AtsA~QiEGa~~~~gkg~siwD~~~~~~~~~~~~~ 47 (476)
T PRK09589 3 GFKKGFLWGGAVAAHQLEGGWNEGGKGISVADVMTAGAHGVPREI 47 (476)
T ss_pred CCCCCCEEeeechHhhhcCCcCCCCCCCchhcccccccccCcccc
Confidence 59999999999999999999999999999999988 4345544
No 8
>PRK13511 6-phospho-beta-galactosidase; Provisional
Probab=99.34 E-value=3.1e-13 Score=111.80 Aligned_cols=42 Identities=33% Similarity=0.648 Sum_probs=37.9
Q ss_pred CCCCCCcchhhhhhhhhhcccccCCCCccchhhhhhhcCCCCc
Q 034239 53 NSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGDQ 95 (100)
Q Consensus 53 ~~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~~~p~~i 95 (100)
..||++|+||+||||||+||++.+||||+|+||++.+ .|+++
T Consensus 3 ~~fP~~FlwG~Atsa~QiEG~~~~~Gkg~siwD~~~~-~~~~~ 44 (469)
T PRK13511 3 KTLPKDFIFGGATAAYQAEGATKTDGKGPVAWDKYLE-ENYWF 44 (469)
T ss_pred CCCCCCCEEEeechHhhhcCCcCCCCCccchhhcccc-cCCCC
Confidence 4599999999999999999999999999999999987 55543
No 9
>PLN02814 beta-glucosidase
Probab=99.33 E-value=1.9e-13 Score=114.47 Aligned_cols=41 Identities=59% Similarity=0.944 Sum_probs=37.6
Q ss_pred CCCCCCCCCcchhhhhhhhhhcccccCCCCccchhhhhhhc
Q 034239 50 STRNSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMD 90 (100)
Q Consensus 50 ~~~~~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~~ 90 (100)
+.+.+||++|+||+||||||+||+++++|||+|+||++.+.
T Consensus 23 ~~~~~fP~~FlwG~AtaA~QiEGa~~~~gkg~siwD~~~~~ 63 (504)
T PLN02814 23 FTRNDFPEDFLFGAATSAYQWEGAVDEDGRTPSVWDTTSHC 63 (504)
T ss_pred cccccCCCCCEEeeechhhhhcCCcCCCCCccchhheeeec
Confidence 44567999999999999999999999999999999998863
No 10
>PRK09593 arb 6-phospho-beta-glucosidase; Reviewed
Probab=99.33 E-value=4.1e-13 Score=111.61 Aligned_cols=42 Identities=33% Similarity=0.494 Sum_probs=37.4
Q ss_pred CCCCCCcchhhhhhhhhhcccccCCCCccchhhhhhhcCCCCc
Q 034239 53 NSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGDQ 95 (100)
Q Consensus 53 ~~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~~~p~~i 95 (100)
.+||++|+||+||||||+||++.+||||+|+||++.+ .|+++
T Consensus 4 ~~fP~~FlwG~AtsA~QiEGa~~~~Gkg~siwD~~~~-~~~~~ 45 (478)
T PRK09593 4 MPFPKGFLWGGATAANQCEGAYNVDGRGLANVDVVPI-GEDRF 45 (478)
T ss_pred ccCCCCCEEeeechHHHhCCCcCCCCCccchhhcccc-CcCcc
Confidence 4599999999999999999999999999999999887 44443
No 11
>TIGR03356 BGL beta-galactosidase.
Probab=99.32 E-value=5.1e-13 Score=109.29 Aligned_cols=43 Identities=47% Similarity=0.885 Sum_probs=38.4
Q ss_pred CCCCcchhhhhhhhhhcccccCCCCccchhhhhhhcCCCCccCC
Q 034239 55 FPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGDQFLS 98 (100)
Q Consensus 55 FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~~~p~~i~d~ 98 (100)
||++|+||+||||+|+||+++++|||+|+||++.+ .|+++.++
T Consensus 1 fp~~FlwG~atsa~Q~EG~~~~~gkg~s~wd~~~~-~~~~~~~~ 43 (427)
T TIGR03356 1 FPKDFLWGVATASYQIEGAVNEDGRGPSIWDTFSH-TPGKVKDG 43 (427)
T ss_pred CCCCCEEeeechHHhhCCCcCCCCCccchhheecc-CCCcccCC
Confidence 79999999999999999999999999999999887 56665443
No 12
>TIGR01233 lacG 6-phospho-beta-galactosidase. This enzyme is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation.
Probab=99.30 E-value=9.2e-13 Score=109.16 Aligned_cols=41 Identities=37% Similarity=0.722 Sum_probs=37.0
Q ss_pred CCCCCCcchhhhhhhhhhcccccCCCCccchhhhhhhcCCCC
Q 034239 53 NSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQPGD 94 (100)
Q Consensus 53 ~~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~~~p~~ 94 (100)
.+||++|+||+||||+|+||++.++|||+|+||++.+ .|++
T Consensus 2 ~~fP~~FlwG~AtsA~QvEG~~~~~Gkg~siwD~~~~-~~~~ 42 (467)
T TIGR01233 2 KTLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLE-DNYW 42 (467)
T ss_pred CCCCCCCEEeeechhhhcCCCcCCCCCcCchhhcccc-CCCC
Confidence 3599999999999999999999999999999999886 4554
No 13
>COG2723 BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]
Probab=99.28 E-value=1.1e-12 Score=109.69 Aligned_cols=45 Identities=40% Similarity=0.742 Sum_probs=39.9
Q ss_pred CCCCCCcchhhhhhhhhhcccccCCCCccchhhhhhhcC-CCCccC
Q 034239 53 NSFPPEFLFGTASSAYQYEGAAHIGGRKRSVWDTFAMDQ-PGDQFL 97 (100)
Q Consensus 53 ~~FP~~FlwG~ATSA~QvEG~~~~dGkG~siWD~~~~~~-p~~i~d 97 (100)
.+||++|+||+||||+|+||++++||||+|+||.+.+.. |+++..
T Consensus 2 ~~FPkdFlWG~AtAa~Q~EGa~~~dGkg~s~wD~~~~~~~~~~~~~ 47 (460)
T COG2723 2 LKFPKDFLWGGATAAFQVEGAWNEDGKGPSDWDVWVHDEIPGRLVS 47 (460)
T ss_pred CCCCCCCeeecccccccccCCcCCCCCCCeeeeeeeccccCCcccC
Confidence 469999999999999999999999999999999999854 555543
No 14
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=48.25 E-value=11 Score=30.41 Aligned_cols=22 Identities=36% Similarity=0.616 Sum_probs=19.9
Q ss_pred CCcEEEeecceecccchhhhhh
Q 034239 3 KLPYIIHRKGEVGMGSWRVEVK 24 (100)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~ 24 (100)
||=.+||-.|.||-++|+++++
T Consensus 102 kLlVLIHGSGvVrAGQWARrLI 123 (297)
T KOG3967|consen 102 KLLVLIHGSGVVRAGQWARRLI 123 (297)
T ss_pred ceEEEEecCceEecchHhhhhh
Confidence 5778999999999999999876
No 15
>PF13986 DUF4224: Domain of unknown function (DUF4224)
Probab=20.68 E-value=61 Score=19.10 Aligned_cols=20 Identities=15% Similarity=0.345 Sum_probs=16.0
Q ss_pred CCCcEEEeecceecccchhh
Q 034239 2 MKLPYIIHRKGEVGMGSWRV 21 (100)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~ 21 (100)
+.+||++.++|...+...++
T Consensus 27 ~Gi~~~~~~~G~p~V~r~~v 46 (47)
T PF13986_consen 27 NGIPFVVRADGRPIVTRSHV 46 (47)
T ss_pred CCCeeEECCCCCEEeeHHHh
Confidence 57899999999888776553
Done!