Citrus Sinensis ID: 034245

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Protein Sequence
MMEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSLRCCLLSFGKTVKVADLQALDWPSH
Secondary Structure (PSIPRED)
cccccccccccccHHHHHHHHHHHccccccEEEHHHHccEEEEEEEEHHHHHHHHHHcccccccccccccccHHHHHHHHHHcccEEEEccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEccccccccHHHHHHHHHHHccccccEccEEEEEEcccEEEEEEEHHHHHHHHHccccccccEEEEEEEHHHHHEEEEccccEEEEEcHHHcccccc
Coil and Loop (DISEMBL)
mmeihntmeevpssMIREVSCLMELNHPNIIRLMLVVSQGLCLFLEYQANDLAYLLkypkdsmdgysikfsssdslRCCLlsfgktvkvadlqaldwpsh
Flexible Loop (DISEMBL)
mmeihntmeevpssMIREVSCLMELNHPNIIRLMLVVSQGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSLRCCLLSFGKTVKVadlqaldwpsh
Low Complexity Region (SEG)
MMEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFsssdslrccllsFGKTVKVADLQALDWPSH
Disordered region (IsUnstruct)
***************IREVSCLMELNHPNIIRLMLVVSQGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSLRCCLLSFGKTVKVADLQALD****
Disordered Region (DISOPRED)
MMEIH*TMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFLEYQANDLAYLLKY*********IKFSSSDSLRCCLLSFGKTVKVADLQALDWP**
Disordered Region (DISEMBL)
***********PSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSLRCCLLSFGKTVKVADLQALDWPSH
Disordered Region (DISPRO)
*M*****MEEVPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSLRCCLLSFGKTVKVADLQALDWP**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MMEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSLRCCLLSFGKTVKVADLQALDWPSH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	100	2.2.26 [Sep-21-2011]
Q00526	305	Cyclin-dependent kinase 3	yes	no	0.62	0.203	0.446	9e-06
P54665	345	Cell division control pro	N/A	no	0.47	0.136	0.510	2e-05
P23437	297	Cyclin-dependent kinase 2	N/A	no	0.6	0.202	0.405	3e-05
Q5E9Y0	298	Cyclin-dependent kinase 2	no	no	0.51	0.171	0.433	0.0001
Q63699	298	Cyclin-dependent kinase 2	yes	no	0.51	0.171	0.433	0.0001
Q27032	298	Cell division control pro	yes	no	0.53	0.177	0.474	0.0001
O55076	298	Cyclin-dependent kinase 2	yes	no	0.51	0.171	0.433	0.0001
P24941	298	Cyclin-dependent kinase 2	no	no	0.51	0.171	0.433	0.0001
Q26671	298	Cell division control pro	yes	no	0.53	0.177	0.474	0.0001
P97377	346	Cyclin-dependent kinase 2	no	no	0.44	0.127	0.5	0.0001

>sp|Q00526|CDK3_HUMAN Cyclin-dependent kinase 3 OS=Homo sapiens GN=CDK3 PE=1 SV=1

 Score = 48.9 bits (115), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 3/65 (4%)

Query: 8   MEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL-AYLLKYPKDSMD 64
           ME VPS+ IRE+S L EL HPNI+RL+ VV   + L L  E+ + DL  Y+   P   + 
Sbjct: 41  MEGVPSTAIREISLLKELKHPNIVRLLDVVHNERKLYLVFEFLSQDLKKYMDSTPGSELP 100

Query: 65  GYSIK 69
            + IK
Sbjct: 101 LHLIK 105

Serine/threonine-protein kinase that plays a critical role in the control of the eukaryotic cell cycle; involved in G0-G1 and G1-S cell cycle transitions. Interacts with CCNC/cyclin-C during interphase. Phosphorylates histone H1, ATF1, RB1 and CABLES1. ATF1 phosphorylation triggers ATF1 transactivation and transcriptional activities, and promotes cell proliferation and transformation. CDK3/cyclin-C mediated RB1 phosphorylation is required for G0-G1 transition. Promotes G1-S transition probably by contributing to the activation of E2F1, E2F2 and E2F3 in a RB1-independent manner.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 2EC: 2

>sp|P54665|CC2H2_TRYBB Cell division control protein 2 homolog 2 OS=Trypanosoma brucei brucei GN=CRK2 PE=3 SV=1

 Score = 48.1 bits (113), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 2/49 (4%)

Query: 11  VPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDLAYLLK 57
           VPS+ +REVS L ELNHP ++RL+ VV     L L  EY   DL  +LK
Sbjct: 86  VPSTAVREVSLLRELNHPYVVRLLDVVLHEAKLLLIFEYMEQDLQGMLK 134

Probably involved in the control of the cell cycle.

Trypanosoma brucei brucei (taxid: 5702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 2

>sp|P23437|CDK2_XENLA Cyclin-dependent kinase 2 OS=Xenopus laevis GN=cdk2 PE=1 SV=3

 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 9/69 (13%)

Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDLAYLLKYP 59
          + +    E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL       
Sbjct: 35 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLNQDL------- 87

Query: 60 KDSMDGYSI 68
          K  MDG +I
Sbjct: 88 KKFMDGSNI 96

Involved in the control of the cell cycle. Interacts with cyclins A, B, D, or E. Activity of CDK2 is maximal during S phase and G2.

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 2

>sp|Q5E9Y0|CDK2_BOVIN Cyclin-dependent kinase 2 OS=Bos taurus GN=CDK2 PE=2 SV=1

 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)

Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          + +    E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 35 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 87

Serine/threonine-protein kinase involved in the control of the cell cycle; essential for meiosis, but dispensable for mitosis. Phosphorylates CTNNB1, USP37, p53/TP53, NPM1, CDK7, RB1, BRCA2, MYC, NPAT, EZH2. Interacts with cyclins A, B1, B3, D, or E. Triggers duplication of centrosomes and DNA. Acts at the G1-S transition to promote the E2F transcriptional program and the initiation of DNA synthesis, and modulates G2 progression; controls the timing of entry into mitosis/meiosis by controlling the subsequent activation of cyclin B/CDK1 by phosphorylation, and coordinates the activation of cyclin B/CDK1 at the centrosome and in the nucleus. Crucial role in orchestrating a fine balance between cellular proliferation, cell death, and DNA repair in human embryonic stem cells (hESCs). Activity of CDK2 is maximal during S phase and G2; activated by interaction with cyclin E during the early stages of DNA synthesis to permit G1-S transition, and subsequently activated by cyclin A2 (cyclin A1 in germ cells) during the late stages of DNA replication to drive the transition from S phase to mitosis, the G2 phase. EZH2 phosphorylation promotes H3K27me3 maintenance and epigenetic gene silencing. Phosphorylates CABLES1 (By similarity). Cyclin E/CDK2 prevents oxidative stress-mediated Ras-induced senescence by phosphorylating MYC. Involved in G1-S phase DNA damage checkpoint that prevents cells with damaged DNA from initiating mitosis; regulates homologous recombination-dependent repair by phosphorylating BRCA2, this phosphorylation is low in S phase when recombination is active, but increases as cells progress towards mitosis. In response to DNA damage, double-strand break repair by homologous recombination a reduction of CDK2-mediated BRCA2 phosphorylation. Phosphorylation of RB1 disturbs its interaction with E2F1. NPM1 phosphorylation by cyclin E/CDK2 promotes its dissociates from unduplicated centrosomes, thus initiating centrosome duplication. Cyclin E/CDK2-mediated phosphorylation of NPAT at G1-S transition and until prophase stimulates the NPAT-mediated activation of histone gene transcription during S phase. Required for vitamin D-mediated growth inhibition by being itself inactivated. Involved in the nitric oxide- (NO) mediated signaling in a nitrosylation/activation-dependent manner. USP37 is activated by phosphorylation and thus triggers G1-S transition. CTNNB1 phosphorylation regulates insulin internalization.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 2

>sp|Q63699|CDK2_RAT Cyclin-dependent kinase 2 OS=Rattus norvegicus GN=Cdk2 PE=1 SV=1

 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)

Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          + +    E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 35 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 87

Serine/threonine-protein kinase involved in the control of the cell cycle; essential for meiosis, but dispensable for mitosis. Phosphorylates CTNNB1, USP37, p53/TP53, NPM1, CDK7, RB1, BRCA2, MYC, NPAT, EZH2. Interacts with cyclins A, B1, B3, D, or E. Triggers duplication of centrosomes and DNA. Acts at the G1-S transition to promote the E2F transcriptional program and the initiation of DNA synthesis, and modulates G2 progression; controls the timing of entry into mitosis/meiosis by controlling the subsequent activation of cyclin B/CDK1 by phosphorylation, and coordinates the activation of cyclin B/CDK1 at the centrosome and in the nucleus. Crucial role in orchestrating a fine balance between cellular proliferation, cell death, and DNA repair in human embryonic stem cells (hESCs). Activity of CDK2 is maximal during S phase and G2; activated by interaction with cyclin E during the early stages of DNA synthesis to permit G1-S transition, and subsequently activated by cyclin A2 (cyclin A1 in germ cells) during the late stages of DNA replication to drive the transition from S phase to mitosis, the G2 phase. EZH2 phosphorylation promotes H3K27me3 maintenance and epigenetic gene silencing. Phosphorylates CABLES1 (By similarity). Cyclin E/CDK2 prevents oxidative stress-mediated Ras-induced senescence by phosphorylating MYC. Involved in G1-S phase DNA damage checkpoint that prevents cells with damaged DNA from initiating mitosis; regulates homologous recombination-dependent repair by phosphorylating BRCA2, this phosphorylation is low in S phase when recombination is active, but increases as cells progress towards mitosis. In response to DNA damage, double-strand break repair by homologous recombination a reduction of CDK2-mediated BRCA2 phosphorylation. Phosphorylation of RB1 disturbs its interaction with E2F1. NPM1 phosphorylation by cyclin E/CDK2 promotes its dissociates from unduplicated centrosomes, thus initiating centrosome duplication. Cyclin E/CDK2-mediated phosphorylation of NPAT at G1-S transition and until prophase stimulates the NPAT-mediated activation of histone gene transcription during S phase. Required for vitamin D-mediated growth inhibition by being itself inactivated. Involved in the nitric oxide- (NO) mediated signaling in a nitrosylation/activation-dependent manner. USP37 is activated by phosphorylation and thus triggers G1-S transition. CTNNB1 phosphorylation regulates insulin internalization.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 2

>sp|Q27032|CDC2H_THEPA Cell division control protein 2 homolog OS=Theileria parva GN=CRK2 PE=3 SV=1

 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 35/59 (59%), Gaps = 6/59 (10%)

Query: 9  EEVPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFL--EYQANDLAYLLKYPKDSMDG 65
          E +PS+ IRE+S L EL+HPNI+ L  V+    CL L  EY   DL  LL    D+ DG
Sbjct: 41 EGIPSTAIREISLLKELHHPNIVWLRDVIHSEKCLTLVFEYLDQDLKKLL----DACDG 95

Plays a key role in the control of the eukaryotic cell cycle. It is required in higher cells for entry into S-phase and mitosis. Component of the kinase complex that phosphorylates the repetitive C-terminus of RNA polymerase II.

Theileria parva (taxid: 5875)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|O55076|CDK2_CRIGR Cyclin-dependent kinase 2 OS=Cricetulus griseus GN=CDK2 PE=2 SV=1

 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)

Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          + +    E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 35 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 87

Serine/threonine-protein kinase involved in the control of the cell cycle; essential for meiosis, but dispensable for mitosis. Phosphorylates CTNNB1, USP37, p53/TP53, NPM1, CDK7, RB1, BRCA2, MYC, NPAT, EZH2. Interacts with cyclins A, B1, B3, D, or E. Triggers duplication of centrosomes and DNA. Acts at the G1-S transition to promote the E2F transcriptional program and the initiation of DNA synthesis, and modulates G2 progression; controls the timing of entry into mitosis/meiosis by controlling the subsequent activation of cyclin B/CDK1 by phosphorylation, and coordinates the activation of cyclin B/CDK1 at the centrosome and in the nucleus. Crucial role in orchestrating a fine balance between cellular proliferation, cell death, and DNA repair in human embryonic stem cells (hESCs). Activity of CDK2 is maximal during S phase and G2; activated by interaction with cyclin E during the early stages of DNA synthesis to permit G1-S transition, and subsequently activated by cyclin A2 (cyclin A1 in germ cells) during the late stages of DNA replication to drive the transition from S phase to mitosis, the G2 phase. EZH2 phosphorylation promotes H3K27me3 maintenance and epigenetic gene silencing. Phosphorylates CABLES1 (By similarity). Cyclin E/CDK2 prevents oxidative stress-mediated Ras-induced senescence by phosphorylating MYC. Involved in G1-S phase DNA damage checkpoint that prevents cells with damaged DNA from initiating mitosis; regulates homologous recombination-dependent repair by phosphorylating BRCA2, this phosphorylation is low in S phase when recombination is active, but increases as cells progress towards mitosis. In response to DNA damage, double-strand break repair by homologous recombination a reduction of CDK2-mediated BRCA2 phosphorylation. Phosphorylation of RB1 disturbs its interaction with E2F1. NPM1 phosphorylation by cyclin E/CDK2 promotes its dissociates from unduplicated centrosomes, thus initiating centrosome duplication. Cyclin E/CDK2-mediated phosphorylation of NPAT at G1-S transition and until prophase stimulates the NPAT-mediated activation of histone gene transcription during S phase. Required for vitamin D-mediated growth inhibition by being itself inactivated. Involved in the nitric oxide- (NO) mediated signaling in a nitrosylation/activation-dependent manner. USP37 is activated by phosphorylation and thus triggers G1-S transition. CTNNB1 phosphorylation regulates insulin internalization.

Cricetulus griseus (taxid: 10029)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 2

>sp|P24941|CDK2_HUMAN Cyclin-dependent kinase 2 OS=Homo sapiens GN=CDK2 PE=1 SV=2

 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)

Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          + +    E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 35 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 87

Serine/threonine-protein kinase involved in the control of the cell cycle; essential for meiosis, but dispensable for mitosis. Phosphorylates CTNNB1, USP37, p53/TP53, NPM1, CDK7, RB1, BRCA2, MYC, NPAT, EZH2. Interacts with cyclins A, B1, B3, D, or E. Triggers duplication of centrosomes and DNA. Acts at the G1-S transition to promote the E2F transcriptional program and the initiation of DNA synthesis, and modulates G2 progression; controls the timing of entry into mitosis/meiosis by controlling the subsequent activation of cyclin B/CDK1 by phosphorylation, and coordinates the activation of cyclin B/CDK1 at the centrosome and in the nucleus. Crucial role in orchestrating a fine balance between cellular proliferation, cell death, and DNA repair in human embryonic stem cells (hESCs). Activity of CDK2 is maximal during S phase and G2; activated by interaction with cyclin E during the early stages of DNA synthesis to permit G1-S transition, and subsequently activated by cyclin A2 (cyclin A1 in germ cells) during the late stages of DNA replication to drive the transition from S phase to mitosis, the G2 phase. EZH2 phosphorylation promotes H3K27me3 maintenance and epigenetic gene silencing. Phosphorylates CABLES1 (By similarity). Cyclin E/CDK2 prevents oxidative stress-mediated Ras-induced senescence by phosphorylating MYC. Involved in G1-S phase DNA damage checkpoint that prevents cells with damaged DNA from initiating mitosis; regulates homologous recombination-dependent repair by phosphorylating BRCA2, this phosphorylation is low in S phase when recombination is active, but increases as cells progress towards mitosis. In response to DNA damage, double-strand break repair by homologous recombination a reduction of CDK2-mediated BRCA2 phosphorylation. Phosphorylation of RB1 disturbs its interaction with E2F1. NPM1 phosphorylation by cyclin E/CDK2 promotes its dissociates from unduplicated centrosomes, thus initiating centrosome duplication. Cyclin E/CDK2-mediated phosphorylation of NPAT at G1-S transition and until prophase stimulates the NPAT-mediated activation of histone gene transcription during S phase. Required for vitamin D-mediated growth inhibition by being itself inactivated. Involved in the nitric oxide- (NO) mediated signaling in a nitrosylation/activation-dependent manner. USP37 is activated by phosphorylation and thus triggers G1-S transition. CTNNB1 phosphorylation regulates insulin internalization.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 2

>sp|Q26671|CDC2H_THEAN Cell division control protein 2 homolog OS=Theileria annulata GN=CRK2 PE=2 SV=1

 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 35/59 (59%), Gaps = 6/59 (10%)

Query: 9  EEVPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFL--EYQANDLAYLLKYPKDSMDG 65
          E +PS+ IRE+S L EL+HPNI+ L  V+    CL L  EY   DL  LL    D+ DG
Sbjct: 41 EGIPSTAIREISLLKELHHPNIVWLRDVIHSEKCLTLVFEYLDQDLKKLL----DACDG 95

Plays a key role in the control of the eukaryotic cell cycle. It is required in higher cells for entry into S-phase and mitosis. Component of the kinase complex that phosphorylates the repetitive C-terminus of RNA polymerase II.

Theileria annulata (taxid: 5874)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P97377|CDK2_MOUSE Cyclin-dependent kinase 2 OS=Mus musculus GN=Cdk2 PE=1 SV=2

 Score = 45.1 bits (105), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 2/46 (4%)

Query: 9  EEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 42 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 87

Serine/threonine-protein kinase involved in the control of the cell cycle; essential for meiosis, but dispensable for mitosis. Phosphorylates CTNNB1, USP37, p53/TP53, NPM1, CDK7, RB1, BRCA2, MYC, NPAT, EZH2. Interacts with cyclins A, B1, B3, D, or E. Triggers duplication of centrosomes and DNA. Acts at the G1-S transition to promote the E2F transcriptional program and the initiation of DNA synthesis, and modulates G2 progression; controls the timing of entry into mitosis/meiosis by controlling the subsequent activation of cyclin B/CDK1 by phosphorylation, and coordinates the activation of cyclin B/CDK1 at the centrosome and in the nucleus. Crucial role in orchestrating a fine balance between cellular proliferation, cell death, and DNA repair in human embryonic stem cells (hESCs). Activity of CDK2 is maximal during S phase and G2; activated by interaction with cyclin E during the early stages of DNA synthesis to permit G1-S transition, and subsequently activated by cyclin A2 (cyclin A1 in germ cells) during the late stages of DNA replication to drive the transition from S phase to mitosis, the G2 phase. EZH2 phosphorylation promotes H3K27me3 maintenance and epigenetic gene silencing. Phosphorylates CABLES1 (By similarity). Cyclin E/CDK2 prevents oxidative stress-mediated Ras-induced senescence by phosphorylating MYC. Involved in G1-S phase DNA damage checkpoint that prevents cells with damaged DNA from initiating mitosis; regulates homologous recombination-dependent repair by phosphorylating BRCA2, this phosphorylation is low in S phase when recombination is active, but increases as cells progress towards mitosis. In response to DNA damage, double-strand break repair by homologous recombination a reduction of CDK2-mediated BRCA2 phosphorylation. Phosphorylation of RB1 disturbs its interaction with E2F1. NPM1 phosphorylation by cyclin E/CDK2 promotes its dissociates from unduplicated centrosomes, thus initiating centrosome duplication. Cyclin E/CDK2-mediated phosphorylation of NPAT at G1-S transition and until prophase stimulates the NPAT-mediated activation of histone gene transcription during S phase. Required for vitamin D-mediated growth inhibition by being itself inactivated. Involved in the nitric oxide- (NO) mediated signaling in a nitrosylation/activation-dependent manner. USP37 is activated by phosphorylation and thus triggers G1-S transition. CTNNB1 phosphorylation regulates insulin internalization.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	100
296044503	308	cell cycle control CDC2 [Paramecium tetr	0.6	0.194	0.444	3e-05
145524890	308	hypothetical protein [Paramecium tetraur	0.61	0.198	0.421	5e-05
145476217	308	hypothetical protein [Paramecium tetraur	0.6	0.194	0.428	6e-05
340055079	340	putative CDC2-related protein kinase [Tr	0.59	0.173	0.426	0.0001
145537740	318	hypothetical protein [Paramecium tetraur	0.61	0.191	0.492	0.0003
145540802	318	hypothetical protein [Paramecium tetraur	0.61	0.191	0.492	0.0003
291241553	265	PREDICTED: cyclin-dependent kinase 2-lik	0.44	0.166	0.565	0.0003
119609759	333	cyclin-dependent kinase 3, isoform CRA_a	0.62	0.186	0.446	0.0003
397484298	333	PREDICTED: cyclin-dependent kinase 3 [Pa	0.62	0.186	0.446	0.0003
427785101	304	Putative cyclin-dependent kinase 2 [Rhip	0.51	0.167	0.471	0.0004

>gi|296044503|gb|AAA79977.2| cell cycle control CDC2 [Paramecium tetraurelia]

 Score = 52.8 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 3/63 (4%)

Query: 2   MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL-AYLLKY 58
           + + +  E +PS+ IRE+S L ELNHPNI++LM VV  ++ L L  EY   DL  +L ++
Sbjct: 40  IRLESEEEGIPSTAIREISLLKELNHPNIVKLMEVVHSNKKLVLVFEYFEMDLKKFLAQF 99

Query: 59  PKD 61
           PK+
Sbjct: 100 PKE 102

Source: Paramecium tetraurelia

Species: Paramecium tetraurelia

Genus: Paramecium

Family: Parameciidae

Order: Peniculida

Class: Oligohymenophorea

Superkingdom: Eukaryota

>gi|145524890|ref|XP_001448267.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124415811|emb|CAK80870.1| unnamed protein product [Paramecium tetraurelia]

 Score = 52.0 bits (123), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 3/64 (4%)

Query: 2   MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL-AYLLKY 58
           + + +  E +PS+ IRE+S L ELNHPNI++LM VV  ++ L L  EY   DL  +  ++
Sbjct: 40  IRLESEEEGIPSTAIREISLLKELNHPNIVKLMEVVHSNKKLVLVFEYVEMDLKKFFAQF 99

Query: 59  PKDS 62
           PK+ 
Sbjct: 100 PKEK 103

Source: Paramecium tetraurelia strain d4-2

Species: Paramecium tetraurelia

Genus: Paramecium

Family: Parameciidae

Order: Peniculida

Class: Oligohymenophorea

Superkingdom: Eukaryota

>gi|145476217|ref|XP_001424131.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124391194|emb|CAK56733.1| unnamed protein product [Paramecium tetraurelia]

 Score = 51.6 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 3/63 (4%)

Query: 2   MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL-AYLLKY 58
           + + +  E +PS+ IRE+S L ELNHPNI++LM VV  ++ L L  EY   DL  +  ++
Sbjct: 40  IRLESEEEGIPSTAIREISLLKELNHPNIVKLMEVVHSNKKLVLVFEYVEMDLKKFFAQF 99

Query: 59  PKD 61
           PK+
Sbjct: 100 PKE 102

Source: Paramecium tetraurelia strain d4-2

Species: Paramecium tetraurelia

Genus: Paramecium

Family: Parameciidae

Order: Peniculida

Class: Oligohymenophorea

Superkingdom: Eukaryota

>gi|340055079|emb|CCC49389.1| putative CDC2-related protein kinase [Trypanosoma vivax Y486]

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 2/61 (3%)

Query: 11  VPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQANDLAYLLKYPKDSMDGYSI 68
           VP++ +REVS L ELNHPN++RL+ V  Q   L L  EY   DL  +LK+ +    G  +
Sbjct: 74  VPATAVREVSLLRELNHPNVVRLLNVTMQDSKLLLIFEYMEQDLHGMLKHRQTPFMGGKL 133

Query: 69  K 69
           +
Sbjct: 134 R 134

Source: Trypanosoma vivax Y486

Species: Trypanosoma vivax

Genus: Trypanosoma

Family: Trypanosomatidae

Order: Kinetoplastida

Superkingdom: Eukaryota

>gi|145537740|ref|XP_001454581.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124422347|emb|CAK87184.1| unnamed protein product [Paramecium tetraurelia]

 Score = 49.3 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 4/65 (6%)

Query: 9   EEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDLAYLL-KYPKD-SMD 64
           E VPS+ IRE+S L ELN+P+I++L  VV  ++ L L  EY   DL  LL   PKD S+D
Sbjct: 51  EGVPSTAIREISLLRELNNPHIVQLRDVVIRNKKLQLVFEYMERDLKALLDSSPKDQSLD 110

Query: 65  GYSIK 69
             +IK
Sbjct: 111 KITIK 115

Source: Paramecium tetraurelia strain d4-2

Species: Paramecium tetraurelia

Genus: Paramecium

Family: Parameciidae

Order: Peniculida

Class: Oligohymenophorea

Superkingdom: Eukaryota

>gi|145540802|ref|XP_001456090.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124423900|emb|CAK88693.1| unnamed protein product [Paramecium tetraurelia]

 Score = 49.3 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 4/65 (6%)

Query: 9   EEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDLAYLLKY-PKD-SMD 64
           E VPS+ IRE+S L ELN+P+I++L  VV  ++ L L  EY   DL  LL   PKD S+D
Sbjct: 51  EGVPSTAIREISLLRELNNPHIVQLRDVVIRNKKLQLVFEYMERDLKALLDISPKDQSLD 110

Query: 65  GYSIK 69
             +IK
Sbjct: 111 KITIK 115

Source: Paramecium tetraurelia strain d4-2

Species: Paramecium tetraurelia

Genus: Paramecium

Family: Parameciidae

Order: Peniculida

Class: Oligohymenophorea

Superkingdom: Eukaryota

>gi|291241553|ref|XP_002740677.1| PREDICTED: cyclin-dependent kinase 2-like [Saccoglossus kowalevskii]

 Score = 49.3 bits (116), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 31/46 (67%), Gaps = 2/46 (4%)

Query: 9  EEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          E VPS+ IRE+S L ELNHPNI+RL+ VV   + L L  EY   DL
Sbjct: 42 EGVPSTAIREISLLKELNHPNIVRLLDVVHSEKKLYLVFEYLNQDL 87

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

>gi|119609759|gb|EAW89353.1| cyclin-dependent kinase 3, isoform CRA_a [Homo sapiens] gi|119609760|gb|EAW89354.1| cyclin-dependent kinase 3, isoform CRA_a [Homo sapiens] gi|119609761|gb|EAW89355.1| cyclin-dependent kinase 3, isoform CRA_a [Homo sapiens]

 Score = 49.3 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 3/65 (4%)

Query: 8   MEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL-AYLLKYPKDSMD 64
           ME VPS+ IRE+S L EL HPNI+RL+ VV   + L L  E+ + DL  Y+   P   + 
Sbjct: 69  MEGVPSTAIREISLLKELKHPNIVRLLDVVHNERKLYLVFEFLSQDLKKYMDSTPGSELP 128

Query: 65  GYSIK 69
            + IK
Sbjct: 129 LHLIK 133

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|397484298|ref|XP_003813314.1| PREDICTED: cyclin-dependent kinase 3 [Pan paniscus]

 Score = 48.9 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 3/65 (4%)

Query: 8   MEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL-AYLLKYPKDSMD 64
           ME VPS+ IRE+S L EL HPNI+RL+ VV   + L L  E+ + DL  Y+   P   + 
Sbjct: 69  MEGVPSTAIREISLLKELKHPNIVRLLDVVHNERKLYLVFEFLSQDLKKYMDSTPGSELP 128

Query: 65  GYSIK 69
            + IK
Sbjct: 129 LHLIK 133

Source: Pan paniscus

Species: Pan paniscus

Genus: Pan

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|427785101|gb|JAA58002.1| Putative cyclin-dependent kinase 2 [Rhipicephalus pulchellus]

 Score = 48.9 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 2/53 (3%)

Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          + + +  E VPS+ IRE++ L EL HPNI+RL+ VV   Q L L  EY + DL
Sbjct: 40 IRLESEAEGVPSTAIREIALLKELRHPNIVRLLDVVPNDQKLYLVFEYMSEDL 92

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	100
UNIPROTKB|K7ELV5	165	CDK3 "Cyclin-dependent kinase	0.62	0.375	0.446	1e-06
UNIPROTKB|K7EJ83	213	CDK3 "Cyclin-dependent kinase	0.62	0.291	0.446	1.8e-06
UNIPROTKB|Q00526	305	CDK3 "Cyclin-dependent kinase	0.62	0.203	0.446	4.6e-06
UNIPROTKB|Q9DG98	303	cdk1 "Cyclin-dependent kinase	0.68	0.224	0.402	7.5e-06
UNIPROTKB|Q9DGA2	303	cdk1 "Cyclin-dependent kinase	0.68	0.224	0.402	7.5e-06
UNIPROTKB|Q9DGA5	303	cdk1 "Cyclin-dependent kinase	0.68	0.224	0.402	7.5e-06
UNIPROTKB|Q9DGD3	303	cdk1 "Cyclin-dependent kinase	0.68	0.224	0.402	7.5e-06
ZFIN|ZDB-GENE-010320-1	302	cdk1 "cyclin-dependent kinase	0.68	0.225	0.388	9.6e-06
UNIPROTKB|P51958	302	cdk1 "Cyclin-dependent kinase	0.68	0.225	0.388	1.2e-05
UNIPROTKB|E5RIU6	189	CDK1 "Cyclin-dependent kinase	0.68	0.359	0.402	1.3e-05

UNIPROTKB|K7ELV5 CDK3 "Cyclin-dependent kinase 3" [Homo sapiens (taxid:9606)]

 Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 29/65 (44%), Positives = 39/65 (60%)

Query:     8 MEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDLA-YLLKYPKDSMD 64
             ME VPS+ IRE+S L EL HPNI+RL+ VV   + L L  E+ + DL  Y+   P   + 
Sbjct:    41 MEGVPSTAIREISLLKELKHPNIVRLLDVVHNERKLYLVFEFLSQDLKKYMDSTPGSELP 100

Query:    65 GYSIK 69
              + IK
Sbjct:   101 LHLIK 105

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|K7EJ83 CDK3 "Cyclin-dependent kinase 3" [Homo sapiens (taxid:9606)]

 Score = 112 (44.5 bits), Expect = 1.8e-06, P = 1.8e-06
 Identities = 29/65 (44%), Positives = 39/65 (60%)

Query:     8 MEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDLA-YLLKYPKDSMD 64
             ME VPS+ IRE+S L EL HPNI+RL+ VV   + L L  E+ + DL  Y+   P   + 
Sbjct:     1 MEGVPSTAIREISLLKELKHPNIVRLLDVVHNERKLYLVFEFLSQDLKKYMDSTPGSELP 60

Query:    65 GYSIK 69
              + IK
Sbjct:    61 LHLIK 65

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|Q00526 CDK3 "Cyclin-dependent kinase 3" [Homo sapiens (taxid:9606)]

 Score = 112 (44.5 bits), Expect = 4.6e-06, P = 4.6e-06
 Identities = 29/65 (44%), Positives = 39/65 (60%)

Query:     8 MEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDLA-YLLKYPKDSMD 64
             ME VPS+ IRE+S L EL HPNI+RL+ VV   + L L  E+ + DL  Y+   P   + 
Sbjct:    41 MEGVPSTAIREISLLKELKHPNIVRLLDVVHNERKLYLVFEFLSQDLKKYMDSTPGSELP 100

Query:    65 GYSIK 69
              + IK
Sbjct:   101 LHLIK 105

GO:0005524 "ATP binding" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=IEA

GO:0045023 "G0 to G1 transition" evidence=TAS

GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS

GO:0008283 "cell proliferation" evidence=TAS

UNIPROTKB|Q9DG98 cdk1 "Cyclin-dependent kinase 1" [Oryzias luzonensis (taxid:104659)]

 Score = 110 (43.8 bits), Expect = 7.5e-06, P = 7.5e-06
 Identities = 29/72 (40%), Positives = 42/72 (58%)

Query:     2 MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFL--EYQANDLA-YLLKY 58
             + + +  E VPS+ +REVS L EL HPN++RL+ V+ Q   L+L  E+ + DL  YL   
Sbjct:    35 IRLESEEEGVPSTAVREVSLLQELKHPNVVRLLDVLMQESRLYLIFEFLSMDLKKYLDSI 94

Query:    59 PKDS-MDGYSIK 69
             P    MD   +K
Sbjct:    95 PSGQYMDPMLVK 106

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=ISS

UNIPROTKB|Q9DGA2 cdk1 "Cyclin-dependent kinase 1" [Oryzias javanicus (taxid:123683)]

 Score = 110 (43.8 bits), Expect = 7.5e-06, P = 7.5e-06
 Identities = 29/72 (40%), Positives = 42/72 (58%)

Query:     2 MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFL--EYQANDLA-YLLKY 58
             + + +  E VPS+ +REVS L EL HPN++RL+ V+ Q   L+L  E+ + DL  YL   
Sbjct:    35 IRLESEEEGVPSTAVREVSLLQELKHPNVVRLLDVLMQESRLYLIFEFLSMDLKKYLDSI 94

Query:    59 PKDS-MDGYSIK 69
             P    MD   +K
Sbjct:    95 PSGQYMDPMLVK 106

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=ISS

UNIPROTKB|Q9DGA5 cdk1 "Cyclin-dependent kinase 1" [Oryzias curvinotus (taxid:104658)]

 Score = 110 (43.8 bits), Expect = 7.5e-06, P = 7.5e-06
 Identities = 29/72 (40%), Positives = 42/72 (58%)

Query:     2 MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFL--EYQANDLA-YLLKY 58
             + + +  E VPS+ +REVS L EL HPN++RL+ V+ Q   L+L  E+ + DL  YL   
Sbjct:    35 IRLESEEEGVPSTAVREVSLLQELKHPNVVRLLDVLMQESRLYLIFEFLSMDLKKYLDSI 94

Query:    59 PKDS-MDGYSIK 69
             P    MD   +K
Sbjct:    95 PSGQYMDPMLVK 106

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=ISS

UNIPROTKB|Q9DGD3 cdk1 "Cyclin-dependent kinase 1" [Oryzias latipes (taxid:8090)]

 Score = 110 (43.8 bits), Expect = 7.5e-06, P = 7.5e-06
 Identities = 29/72 (40%), Positives = 42/72 (58%)

Query:     2 MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFL--EYQANDLA-YLLKY 58
             + + +  E VPS+ +REVS L EL HPN++RL+ V+ Q   L+L  E+ + DL  YL   
Sbjct:    35 IRLESEEEGVPSTAVREVSLLQELKHPNVVRLLDVLMQESRLYLIFEFLSMDLKKYLDSI 94

Query:    59 PKDS-MDGYSIK 69
             P    MD   +K
Sbjct:    95 PSGQYMDPMLVK 106

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=ISS

ZFIN|ZDB-GENE-010320-1 cdk1 "cyclin-dependent kinase 1" [Danio rerio (taxid:7955)]

 Score = 109 (43.4 bits), Expect = 9.6e-06, P = 9.6e-06
 Identities = 28/72 (38%), Positives = 43/72 (59%)

Query:     2 MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFL--EYQANDLA-YLLKY 58
             + + +  E VPS+ +RE+S L EL HPN++RL+ V+ Q   L+L  E+ + DL  YL   
Sbjct:    35 IRLESEEEGVPSTAVREISLLKELQHPNVVRLLDVLMQESKLYLVFEFLSMDLKKYLDSI 94

Query:    59 PK-DSMDGYSIK 69
             P  + MD   +K
Sbjct:    95 PSGEFMDPMLVK 106

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0009794 "regulation of mitotic cell cycle, embryonic" evidence=IMP

GO:0051301 "cell division" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|P51958 cdk1 "Cyclin-dependent kinase 1" [Carassius auratus (taxid:7957)]

 Score = 108 (43.1 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 28/72 (38%), Positives = 42/72 (58%)

Query:     2 MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFL--EYQANDLA-YLLKY 58
             + + +  E VPS+ +RE+S L EL HPN++RL+ V+ Q   L+L  E+ + DL  YL   
Sbjct:    35 IRLESEEEGVPSTAVREISLLKELQHPNVVRLLDVLMQESKLYLVFEFLSMDLKKYLDSI 94

Query:    59 PKDS-MDGYSIK 69
             P    MD   +K
Sbjct:    95 PSGQFMDPMLVK 106

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=ISS

UNIPROTKB|E5RIU6 CDK1 "Cyclin-dependent kinase 1" [Homo sapiens (taxid:9606)]

 Score = 103 (41.3 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 29/72 (40%), Positives = 40/72 (55%)

Query:     2 MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFL--EYQANDLA-YLLKY 58
             + + +  E VPS+ IRE+S L EL HPNI+ L  V+ Q   L+L  E+ + DL  YL   
Sbjct:    35 IRLESEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQDSRLYLIFEFLSMDLKKYLDSI 94

Query:    59 PKDS-MDGYSIK 69
             P    MD   +K
Sbjct:    95 PPGQYMDSSLVK 106

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

No confident hit detected by STRING

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	100
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	3e-12
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	2e-11
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	8e-09
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	1e-08
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	4e-08
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	1e-07
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	3e-07
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	4e-07
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	5e-07
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	8e-07
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	8e-07
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-06
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	2e-06
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	4e-06
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	7e-06
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	1e-05
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	9e-05
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	1e-04
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	1e-04
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	1e-04
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	2e-04
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	2e-04
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	5e-04
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	7e-04
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	7e-04
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	0.001
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	0.001
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	0.001
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	0.001
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	0.001
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	0.001
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	0.002
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	0.002
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	0.002
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	0.003
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	0.003
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	0.003
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	0.004
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	0.004

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 60.2 bits (147), Expect = 3e-12
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 2/72 (2%)

Query: 1   MMEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFL--EYQANDLAYLLKY 58
            + + N  E +PS+ +RE+S L EL HPNI++L+ V+     L+L  EY   DL   L  
Sbjct: 31  KIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCDMDLKKYLDK 90

Query: 59  PKDSMDGYSIKF 70
               +    IK 
Sbjct: 91  RPGPLSPNLIKS 102

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 58.1 bits (141), Expect = 2e-11
 Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 3/64 (4%)

Query: 9   EEVPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFL--EYQANDLA-YLLKYPKDSMDG 65
           E VPS+ IRE+S L ELNHPNI+RL+ VV     L+L  E+   DL  Y+   P   +D 
Sbjct: 39  EGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDP 98

Query: 66  YSIK 69
             IK
Sbjct: 99  PLIK 102

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 50.6 bits (121), Expect = 8e-09
 Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 2/47 (4%)

Query: 8  MEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
           E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 39 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 85

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 49.7 bits (119), Expect = 1e-08
 Identities = 30/65 (46%), Positives = 38/65 (58%), Gaps = 4/65 (6%)

Query: 9   EEVPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFL--EYQANDLA-YLLKYPKD-SMD 64
           E VPS+ IRE+S L EL HPNI+ L  V+ Q   L+L  E+ + DL  YL   PK   MD
Sbjct: 40  EGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMD 99

Query: 65  GYSIK 69
              +K
Sbjct: 100 AELVK 104

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 48.8 bits (117), Expect = 4e-08
 Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 11/80 (13%)

Query: 2   MEIHNTMEEVPSSMIREVSCLMEL---NHPNIIRLMLV-----VSQGLCLFL--EYQAND 51
           + +  + E +P S +RE++ L +L    HPNI+RL+ V       + L L L  E+   D
Sbjct: 32  VRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQD 91

Query: 52  LA-YLLKYPKDSMDGYSIKF 70
           LA YL K PK  +   +IK 
Sbjct: 92  LATYLSKCPKPGLPPETIKD 111

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 47.5 bits (113), Expect = 1e-07
 Identities = 25/53 (47%), Positives = 30/53 (56%), Gaps = 3/53 (5%)

Query: 3  EIHNTMEE-VPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          EIH   EE  PS+ IRE+S + EL H NI+RL  V+     L L  EY   DL
Sbjct: 32 EIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDKDL 84

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 46.0 bits (110), Expect = 3e-07
 Identities = 25/115 (21%), Positives = 44/115 (38%), Gaps = 35/115 (30%)

Query: 5   HNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQAN-DLAYLLKYPKD 61
            +  E+     +RE   + +L+HPN+++L+ V ++   L + +EY    DL   L+  + 
Sbjct: 38  EDASEQQIEEFLREARIMRKLDHPNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNRP 97

Query: 62  SMDGYSIKFSSSD----------------SLRC---------CLLSFGKTVKVAD 91
                  K S SD                S            CL+     VK++D
Sbjct: 98  -------KLSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISD 145

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 45.6 bits (109), Expect = 4e-07
 Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 22/109 (20%)

Query: 5   HNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQAN-DLAYLLKYPKD 61
            +  E+     +RE   + +L+HPNI++L+ V ++   L + +EY    DL   L+  + 
Sbjct: 38  EDASEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRP 97

Query: 62  SMDGYSIKFS-SSD---------SLRC---------CLLSFGKTVKVAD 91
                S   S +           S            CL+     VK++D
Sbjct: 98  KELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISD 146

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 45.6 bits (108), Expect = 5e-07
 Identities = 21/44 (47%), Positives = 28/44 (63%)

Query: 9  EEVPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFLEYQANDL 52
          E VPS+ IRE+S L E+ H NI+RL  VV     L+L ++  DL
Sbjct: 42 EGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDL 85

Length = 294

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 44.8 bits (107), Expect = 8e-07
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 3/53 (5%)

Query: 8  MEEVPSSMIREVSCLMELNHPNIIRL--MLVVSQGLCLFLEY-QANDLAYLLK 57
          +++    ++RE+  L +L HPNI+RL  +      L L +EY +  DL  LLK
Sbjct: 37 IKKDRERILREIKILKKLKHPNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLK 89

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 45.0 bits (107), Expect = 8e-07
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 6  NTMEEVPSSMIREVSCLMELNHPNIIRLMLV--VSQGLCLFLEYQANDLAYLLK 57
               +P+  +RE+  L    HP +++L+ V     G  L +EY  +DL+ +L+
Sbjct: 37 RLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYMPSDLSEVLR 90

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 31/108 (28%), Positives = 45/108 (41%), Gaps = 21/108 (19%)

Query: 5   HNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQAN------------ 50
               EE     + E S + +L+HPNI+RL+ V +QG  L +  EY               
Sbjct: 38  EGASEEEREEFLEEASIMKKLSHPNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGE 97

Query: 51  --DLAYLLKYPKDSMDG--Y--SIKFSSSD-SLRCCLLSFGKTVKVAD 91
              L  LL+       G  Y  S  F   D + R CL++    VK++D
Sbjct: 98  KLTLKDLLQMALQIAKGMEYLESKNFVHRDLAARNCLVTENLVVKISD 145

Length = 258

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)

Query: 3  EIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQANDLAYLLK 57
          E     + +  + +RE+  L EL HPNII L+ V      + L  E+   DL  ++K
Sbjct: 37 ERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFMETDLEKVIK 93

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 42.8 bits (101), Expect = 4e-06
 Identities = 27/60 (45%), Positives = 33/60 (55%), Gaps = 6/60 (10%)

Query: 9  EEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDLAYLLKYPKDSMDGY 66
          E VPSS +RE+  L EL H NI+RL  V+   + L L  EY   DL    KY  DS +G 
Sbjct: 40 EGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCDQDLK---KY-FDSCNGD 95

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 42.1 bits (100), Expect = 7e-06
 Identities = 28/116 (24%), Positives = 42/116 (36%), Gaps = 29/116 (25%)

Query: 5   HNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQAN-DL-AYLLKYPK 60
            +  EE     ++E   + +L HPN++RL+ V ++   L L LEY    DL  YL K   
Sbjct: 33  EDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRP 92

Query: 61  DSMDGYSIKFSSSD----------------SLRC---------CLLSFGKTVKVAD 91
                     S  D                S +          CL+     VK++D
Sbjct: 93  VFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISD 148

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 11/74 (14%)

Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLM-LVVSQG---LCLFLEYQANDLAYLLK 57
          + + N  E  P + IRE+  L +L HPNI+RL  +V S+G   + +  EY  +DL  LL 
Sbjct: 32 IRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMDHDLTGLLD 91

Query: 58 YPKDSMDGYSIKFS 71
           P        +KF+
Sbjct: 92 SP-------EVKFT 98

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 39.3 bits (92), Expect = 9e-05
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 8/57 (14%)

Query: 11  VPSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQANDLAYLLKYPKDSM 63
           +P S +RE++ L+ L HPNI+ L  VV       + L +EY   DLA LL    D+M
Sbjct: 49  IPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCEQDLASLL----DNM 101

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 38.8 bits (91), Expect = 1e-04
 Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 2/49 (4%)

Query: 11 VPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDLAYLLK 57
          +P + +RE+  L ELNHPNII+L+ V      L L  E+   DL  L+K
Sbjct: 41 IPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDTDLYKLIK 89

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 38.8 bits (90), Expect = 1e-04
 Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 3/57 (5%)

Query: 6  NTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDLA-YLLKYP 59
           T E VP + IRE S L  L H NI+ L  ++   + L    EY   DLA Y++++P
Sbjct: 41 KTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMHTDLAQYMIQHP 97

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 38.9 bits (91), Expect = 1e-04
 Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 31/108 (28%)

Query: 16  IREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQAN-DLAYLLKY--PKDSMDGYSIKF 70
           ++EV  L  L+ PNI RL+ V +    LC+ +EY  N DL   L+    + S    + K 
Sbjct: 67  LKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKS 126

Query: 71  SSSDSL--------------------------RCCLLSFGKTVKVADL 92
            S  +L                          R CL+    T+K+AD 
Sbjct: 127 LSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIADF 174

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 38.1 bits (89), Expect = 2e-04
 Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 17/81 (20%)

Query: 4   IHNTMEEVPSSMIREVSCLMELNHPNIIRL--MLVVSQG------LCLF--LEYQANDLA 53
           +HN  +  P + +RE+  L +L HPN++ L  M V            ++    Y  +DL+
Sbjct: 43  MHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLS 102

Query: 54  YLLKYPKDSMDGYSIKFSSSD 74
            LL+ P       S+K + S 
Sbjct: 103 GLLENP-------SVKLTESQ 116

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 38.0 bits (89), Expect = 2e-04
 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 4/56 (7%)

Query: 7  TMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFL--EYQANDLAYLLKY 58
              +  S  RE++ L EL H N++ L+ V        ++L  +Y  +DL  ++K+
Sbjct: 41 QYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFDYAEHDLWQIIKF 96

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 36.9 bits (85), Expect = 5e-04
 Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 2/63 (3%)

Query: 9   EEVPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFL--EYQANDLAYLLKYPKDSMDGY 66
           E  P + IREVS L  L H NI+ L  ++    CL L  EY  +DL   L    + M  +
Sbjct: 44  EGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLDSDLKQYLDNCGNLMSMH 103

Query: 67  SIK 69
           ++K
Sbjct: 104 NVK 106

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 36.6 bits (85), Expect = 7e-04
 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 4/61 (6%)

Query: 3  EIHNTMEE-VPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDLA-YLLKY 58
          EI    EE  P + IRE S L +L H NI+ L  ++   + L L  EY   DL  Y+   
Sbjct: 37 EIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLDTDLKQYMDDC 96

Query: 59 P 59
           
Sbjct: 97 G 97

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 36.7 bits (85), Expect = 7e-04
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 7/65 (10%)

Query: 17  REVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSS 73
           RE + + E +HPNI++L+ V + G  +CL  EY A  DL   L+         +    S 
Sbjct: 57  REAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLR----HRSPRAQCSLSH 112

Query: 74  DSLRC 78
            +   
Sbjct: 113 STSSA 117

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 36.1 bits (84), Expect = 0.001
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 2/48 (4%)

Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRL--MLVVSQGLCLFLEY 47
          ++  +   +   +  RE+  L  L+HPNI+RL         L L +EY
Sbjct: 32 LKKRSEKSKKDQTARREIRILRRLSHPNIVRLIDAFEDKDHLYLVMEY 79

Length = 260

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 36.1 bits (83), Expect = 0.001
 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 11/79 (13%)

Query: 2   MEIHNTMEEVPSSMIREVSCLMEL---NHPNIIRLMLVVSQG-------LCLFLEYQAND 51
           + +    + +P S +REV+ L  L   +HPNI+RLM V +         + L  E+   D
Sbjct: 33  VRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVDQD 92

Query: 52  L-AYLLKYPKDSMDGYSIK 69
           L  YL K P   +   +IK
Sbjct: 93  LRTYLDKVPPPGLPAETIK 111

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 35.8 bits (83), Expect = 0.001
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)

Query: 15 MIREVSCLMELNHPNIIRLMLV-VSQGLCLFLEY--QANDLAYLLKYP 59
           +RE S + +L+HP I+RL+ V   + L L +E       L YL K  
Sbjct: 43 FLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLGPLLKYLKKRR 90

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 35.8 bits (83), Expect = 0.001
 Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 10/74 (13%)

Query: 6   NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQ----------GLCLFLEYQANDLAYL 55
           N  E  P + +RE+  L  L H N++ L+ +                L  E+  +DLA L
Sbjct: 49  NEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGL 108

Query: 56  LKYPKDSMDGYSIK 69
           L           IK
Sbjct: 109 LSNKNVKFTLSEIK 122

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 35.7 bits (83), Expect = 0.001
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 3/62 (4%)

Query: 6  NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQAN-DLAYLLKYPKDS 62
               +   ++RE+  L +LNHPNI++L  V      L L +EY     L  LLK  +  
Sbjct: 29 EDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGK 88

Query: 63 MD 64
          + 
Sbjct: 89 LS 90

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 35.5 bits (82), Expect = 0.001
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 12/64 (18%)

Query: 6   NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVS------------QGLCLFLEYQANDLA 53
           N  E  P + IRE+  L +LNH NI+ L  +V+                L  EY  +DL 
Sbjct: 44  NEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLM 103

Query: 54  YLLK 57
            LL+
Sbjct: 104 GLLE 107

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 35.4 bits (81), Expect = 0.002
 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 2/64 (3%)

Query: 9   EEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDLAYLLKYPKDSMDGY 66
           E  P + IREVS L +L H NI+ L  ++   + L L  EY   DL   L    +S++ +
Sbjct: 45  EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNSINMH 104

Query: 67  SIKF 70
           ++K 
Sbjct: 105 NVKL 108

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 35.2 bits (81), Expect = 0.002
 Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 3/52 (5%)

Query: 9  EEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQA-NDLAYLLK 57
          EEV  ++ +E+  +  LNHP+IIR++    +     LF+E+ A   +++LL 
Sbjct: 44 EEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLS 95

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 35.2 bits (82), Expect = 0.002
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 3/45 (6%)

Query: 16 IREVSCLMELNHPNIIRLM--LVVSQGLCLFLEYQAN-DLAYLLK 57
          + EV  L +LNHPNII+          LC+ +EY    DL+  +K
Sbjct: 47 LNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIK 91

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 34.9 bits (81), Expect = 0.003
 Identities = 12/34 (35%), Positives = 21/34 (61%)

Query: 4  IHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV 37
          +    E  P + +RE++ L++L HPNI+ +  VV
Sbjct: 40 MEKEKEGFPITSLREINILLKLQHPNIVTVKEVV 73

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 34.6 bits (79), Expect = 0.003
 Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 11/79 (13%)

Query: 2   MEIHNTMEEVPSSMIREVSCLMEL---NHPNIIRLMLVVS-------QGLCLFLEYQAND 51
           + +    E +P S IREV+ L  L    HPN++RL  V +         L L  E+   D
Sbjct: 35  VRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQD 94

Query: 52  L-AYLLKYPKDSMDGYSIK 69
           L  YL K P+  +   +IK
Sbjct: 95  LTTYLDKVPEPGVPTETIK 113

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 34.6 bits (79), Expect = 0.003
 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)

Query: 9   EEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDLAYLLKYPKDSMDGY 66
           E  P + IREVS L +L H NI+ L  +V   + L L  EY   DL   +    + M  +
Sbjct: 45  EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGNIMSMH 104

Query: 67  SIK 69
           ++K
Sbjct: 105 NVK 107

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 34.6 bits (79), Expect = 0.004
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)

Query: 11 VPSSMIREVSCLMELNHPNIIRLMLV----VSQGLCLFLEYQANDLAYLLKYPKDS 62
          +  S  RE++ L EL HPN+I L  V      + + L  +Y  +DL +++K+ + S
Sbjct: 41 ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRAS 96

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 34.5 bits (80), Expect = 0.004
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRL--MLVVSQGLCLFLEYQAN-DLAYLLK 57
          + +    EE   S+++E+  L  L HPNI++    +  S  L + LEY  N  L  ++K
Sbjct: 33 ISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIK 91

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	100
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.86
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.84
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.82
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.82
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.81
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.81
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.79
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.78
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.78
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.76
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.76
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.75
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.74
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.74
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.73
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.71
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.71
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.71
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.71
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.69
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.69
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.67
KOG0198	313	consensus MEKK and related serine/threonine protei	99.67
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.67
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.66
KOG0584	632	consensus Serine/threonine protein kinase [General	99.66
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.66
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.66
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.66
KOG0589	426	consensus Serine/threonine protein kinase [General	99.65
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.63
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.63
KOG0578	550	consensus p21-activated serine/threonine protein k	99.62
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.62
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.61
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.59
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.59
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.58
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.58
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.58
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.57
KOG0605	550	consensus NDR and related serine/threonine kinases	99.56
PTZ00267	478	NIMA-related protein kinase; Provisional	99.56
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.55
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.55
KOG0586	596	consensus Serine/threonine protein kinase [General	99.55
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.54
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.54
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.54
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.54
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.54
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.54
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.54
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.53
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.53
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.53
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.53
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.53
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.53
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.53
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.53
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.53
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.52
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.52
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.52
PHA02988	283	hypothetical protein; Provisional	99.52
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.52
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.51
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.51
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.51
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.51
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.51
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.51
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.5
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.5
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.5
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.5
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.5
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.49
PHA03212	391	serine/threonine kinase US3; Provisional	99.49
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.49
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.49
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.49
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.49
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.49
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.49
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.48
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.48
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.48
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.48
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.48
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.48
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.48
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.47
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.47
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.47
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.47
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.47
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.47
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.47
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.46
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.46
KOG0610	459	consensus Putative serine/threonine protein kinase	99.46
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.46
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.46
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.45
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.45
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.45
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.45
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.45
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.45
PHA03211	461	serine/threonine kinase US3; Provisional	99.45
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.45
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.45
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.45
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.45
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.45
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.45
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.44
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.44
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.44
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.44
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.44
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.44
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.44
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.44
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.44
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.43
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.43
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.43
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.43
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.43
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.43
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.43
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.43
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.42
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.42
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.42
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.42
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.42
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.42
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.42
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.42
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.42
PHA03209	357	serine/threonine kinase US3; Provisional	99.42
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.41
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.41
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.41
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.41
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.41
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.41
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.41
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.41
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.41
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.41
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.41
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.41
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.41
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.4
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.4
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.4
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.4
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.4
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.4
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.4
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.4
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.4
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.4
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.4
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.4
PHA03207	392	serine/threonine kinase US3; Provisional	99.4
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.4
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.4
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.4
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.4
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.4
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.4
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.39
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.39
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.39
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.39
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.39
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.39
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.39
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.39
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.39
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.39
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.39
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.38
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.38
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.38
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.38
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.38
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.38
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.38
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.38
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.38
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.38
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.38
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.38
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.37
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.37
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.37
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.37
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.37
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.37
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.37
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.37
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.37
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.37
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.37
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.37
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.37
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.37
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.37
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.36
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.36
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.36
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.36
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.36
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.36
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.36
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.36
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.36
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.36
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.36
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.36
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.36
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.36
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.35
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.35
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.35
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.35
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.35
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.35
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.35
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.35
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.35
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.35
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.35
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.35
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.35
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.35
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.35
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.35
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.35
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.34
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.34
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.34
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.34
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.34
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.34
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.34
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.33
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.33
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.33
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.33
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.33
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.33
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.33
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.33
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.33
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.33
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.33
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.33
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.33
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.33
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.33
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.33
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.33
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.33
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.32
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.32
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.32
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.32
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.32
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.32
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.32
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.32
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.31
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.31
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.31
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.31
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.31
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.31
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.31
PLN00009	294	cyclin-dependent kinase A; Provisional	99.31
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.31
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.31
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.31
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.3
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.3
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.3
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.3
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.3
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.3
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.3
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.3
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.3
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.3
PHA03210	501	serine/threonine kinase US3; Provisional	99.3
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.3
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.3
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.29
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.28
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.28
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.28
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.28
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.28
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.27
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.27
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.27
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.27
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.27
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.27
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.26
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.26
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.26
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.26
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.26
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.25
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.25
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.25
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.24
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.24
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.24
PTZ00283	496	serine/threonine protein kinase; Provisional	99.24
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.24
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.23
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.23
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.23
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.23
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.23
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.23
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.23
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.23
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.22
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.22
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.22
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.22
KOG1152	772	consensus Signal transduction serine/threonine kin	99.22
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.21
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.21
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.21
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.21
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.21
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.2
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.2
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.19
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.19
PTZ00036	440	glycogen synthase kinase; Provisional	99.19
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.19
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.18
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.18
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.16
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.15
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.15
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.14
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.14
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.14
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.14
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.14
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.14
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.14
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.13
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.13
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.13
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.13
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.12
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.09
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.08
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.08
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.06
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.06
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.05
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.04
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.04
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.03
PRK10345	210	hypothetical protein; Provisional	99.03
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.01
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.0
KOG3653	534	consensus Transforming growth factor beta/activin	98.97
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.95
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	98.9
PTZ00284	467	protein kinase; Provisional	98.9
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	98.89
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.88
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	98.88
PRK09188	365	serine/threonine protein kinase; Provisional	98.87
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	98.86
KOG0695	593	consensus Serine/threonine protein kinase [Signal	98.82
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	98.79
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	98.7
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	98.69
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.69
PHA02882	294	putative serine/threonine kinase; Provisional	98.68
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	98.66
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	98.65
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	98.63
KOG1027	903	consensus Serine/threonine protein kinase and endo	98.61
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.61
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.6
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	98.59
PRK14879	211	serine/threonine protein kinase; Provisional	98.56
PRK12274	218	serine/threonine protein kinase; Provisional	98.51
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.48
KOG1290	590	consensus Serine/threonine protein kinase [Signal	98.42
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.42
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	98.38
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.37
smart00090	237	RIO RIO-like kinase.	98.35
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.1
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.09
PLN00181	793	protein SPA1-RELATED; Provisional	98.07
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.07
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.06
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	97.95
KOG0590	601	consensus Checkpoint kinase and related serine/thr	97.94
KOG1167	418	consensus Serine/threonine protein kinase of the C	97.92
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.84
KOG1243	690	consensus Protein kinase [General function predict	97.78
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.77
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	97.75
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	97.74
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	97.66
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	97.47
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	97.44
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	97.42
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	97.42
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	97.34
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	97.3
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	97.25
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	97.18
KOG3087	229	consensus Serine/threonine protein kinase [General	97.12
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.03
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	97.02
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	96.57
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	96.57
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	96.31
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	96.13
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	95.79
KOG1266	458	consensus Protein kinase [Signal transduction mech	95.44
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	95.43
PRK09902	216	hypothetical protein; Provisional	95.38
COG0661	517	AarF Predicted unusual protein kinase [General fun	95.35
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	95.23
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	94.68
KOG0590	601	consensus Checkpoint kinase and related serine/thr	94.31
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	94.3
COG0478	304	RIO-like serine/threonine protein kinase fused to	93.43
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	93.37
KOG1235	538	consensus Predicted unusual protein kinase [Genera	92.75
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	92.01
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	81.77
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	80.64

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.86  E-value=1.8e-21  Score=125.70  Aligned_cols=95  Identities=32%  Similarity=0.445  Sum_probs=88.3

Q ss_pred             eeccCCCCcchhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-
Q 034245            2 MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-   76 (100)
Q Consensus         2 ~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-   76 (100)
                      +|++.++++....+.|||.+|++++||||+++.++..    ..+|+|+||++.||..++......|+.++++.+++|++ 
T Consensus       150 vr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~  229 (560)
T KOG0600|consen  150 VRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLE  229 (560)
T ss_pred             eecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHH
Confidence            4678888999999999999999999999999999987    68999999999999999988766699999999999987 


Q ss_pred             -----------------hcccccCCCeEEEeecCCCC
Q 034245           77 -----------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -----------------~nil~~~~~~~ki~dfgl~~   96 (100)
                                       .|+|++.+|.+||+|||+|.
T Consensus       230 Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr  266 (560)
T KOG0600|consen  230 GLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLAR  266 (560)
T ss_pred             HHHHHhhcCeeeccccccceEEcCCCCEEecccccee
Confidence                             89999999999999999997

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.84  E-value=2.5e-20  Score=120.43  Aligned_cols=88  Identities=18%  Similarity=0.254  Sum_probs=78.9

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhcc-CCCCCCHHHHHHHHHHhH----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKY-PKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~-~~~~~~~~~~~~~~~~~~----------   76 (100)
                      ..++|.+|+.++++++|++||+++++|.  ..+++||||++ |+|.++++. .+..+..++...++.|++          
T Consensus       244 ~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~  323 (468)
T KOG0197|consen  244 SPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN  323 (468)
T ss_pred             ChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC
Confidence            4578999999999999999999999999  66999999999 999999997 333488888888888877          


Q ss_pred             --------hcccccCCCeEEEeecCCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                              +|||++.+..+||+|||+|..+
T Consensus       324 ~IHRDLAARNiLV~~~~~vKIsDFGLAr~~  353 (468)
T KOG0197|consen  324 YIHRDLAARNILVDEDLVVKISDFGLARLI  353 (468)
T ss_pred             ccchhhhhhheeeccCceEEEccccccccc
Confidence                    9999999999999999999753

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.82  E-value=1.1e-19  Score=115.10  Aligned_cols=88  Identities=24%  Similarity=0.356  Sum_probs=78.1

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      +..+....|+++|+.++|||||++.+.+.  +.+|+|||||. |+|..++...+. +++..++.++.|++          
T Consensus        51 k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~~~-l~e~t~r~Fm~QLA~alq~L~~~~  129 (429)
T KOG0595|consen   51 KLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRRGR-LPEATARHFMQQLASALQFLHENN  129 (429)
T ss_pred             HHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34556789999999999999999999999  99999999999 999999998875 99999999999977          


Q ss_pred             --------hcccccCC------CeEEEeecCCCCCC
Q 034245           77 --------RCCLLSFG------KTVKVADLQALDWP   98 (100)
Q Consensus        77 --------~nil~~~~------~~~ki~dfgl~~~~   98 (100)
                              +||+++..      -.+||+|||+|...
T Consensus       130 IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L  165 (429)
T KOG0595|consen  130 IIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL  165 (429)
T ss_pred             eeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence                    89999865      46899999999653

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.82  E-value=8.4e-20  Score=123.23  Aligned_cols=87  Identities=29%  Similarity=0.445  Sum_probs=77.6

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC---------CC----CCHHHHHHHHHH
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK---------DS----MDGYSIKFSSSD   74 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~---------~~----~~~~~~~~~~~~   74 (100)
                      ..++|.||++++++++|||||+++|+|.  ..+++++||+. |||.++++...         .+    ++..+...++.|
T Consensus       532 ~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~Q  611 (774)
T KOG1026|consen  532 ARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQ  611 (774)
T ss_pred             HHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHH
Confidence            6789999999999999999999999999  89999999999 99999997542         12    667788888888


Q ss_pred             hH------------------hcccccCCCeEEEeecCCCCC
Q 034245           75 SL------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        75 ~~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      ++                  |||+++.+-.|||+|||++.-
T Consensus       612 IAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRd  652 (774)
T KOG1026|consen  612 IAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRD  652 (774)
T ss_pred             HHHHHHHHHhCcccccchhhhhceeccceEEEecccccchh
Confidence            77                  999999999999999999853

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.81  E-value=1.9e-19  Score=109.20  Aligned_cols=98  Identities=28%  Similarity=0.386  Sum_probs=87.5

Q ss_pred             eeccCCCCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH---
Q 034245            2 MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL---   76 (100)
Q Consensus         2 ~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~---   76 (100)
                      +|+.+..++...+++||+..|+.++|+||+.+.++|.  +.+.+|+||++.+|...+++....++..+++.++.+.+   
T Consensus        35 Ikl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl  114 (318)
T KOG0659|consen   35 IKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGL  114 (318)
T ss_pred             eeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEeccccHHHHhcccccccCHHHHHHHHHHHHHHH
Confidence            3455666777889999999999999999999999999  89999999999999999999887799999998887755   


Q ss_pred             ---------------hcccccCCCeEEEeecCCCCCCC
Q 034245           77 ---------------RCCLLSFGKTVKVADLQALDWPS   99 (100)
Q Consensus        77 ---------------~nil~~~~~~~ki~dfgl~~~~~   99 (100)
                                     .|++++++|.+|++|||+|+.-+
T Consensus       115 ~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~  152 (318)
T KOG0659|consen  115 AYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFG  152 (318)
T ss_pred             HHHHhhhhhcccCCccceEEcCCCcEEeecccchhccC
Confidence                           89999999999999999997643

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.81  E-value=3.5e-20  Score=114.31  Aligned_cols=92  Identities=22%  Similarity=0.221  Sum_probs=82.1

Q ss_pred             CCCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH--------
Q 034245            7 TMEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~--------   76 (100)
                      +++...+-++||+++|++++|+|+|.+.++|.  ..+++|+|||+.++.+-+....++++...+..++.|++        
T Consensus        40 dd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk  119 (396)
T KOG0593|consen   40 DDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHK  119 (396)
T ss_pred             ccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhh
Confidence            34555667999999999999999999999999  99999999999877777777777799999999999976        


Q ss_pred             ----------hcccccCCCeEEEeecCCCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                                +||+++.+|.+|++|||+|...
T Consensus       120 ~n~IHRDIKPENILit~~gvvKLCDFGFAR~L  151 (396)
T KOG0593|consen  120 NNCIHRDIKPENILITQNGVVKLCDFGFARTL  151 (396)
T ss_pred             cCeecccCChhheEEecCCcEEeccchhhHhh
Confidence                      8999999999999999999764

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.79  E-value=3.9e-19  Score=113.69  Aligned_cols=87  Identities=21%  Similarity=0.336  Sum_probs=79.4

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      +.....++||++++..++||||++++++|+  +.+.++|||.. |+|++++...+. +++...+.+++|+.         
T Consensus        94 eqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSer~~-LsErEaRhfFRQIvSAVhYCHkn  172 (668)
T KOG0611|consen   94 EQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASGGELYDYISERGS-LSEREARHFFRQIVSAVHYCHKN  172 (668)
T ss_pred             HHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCCccHHHHHHHhcc-ccHHHHHHHHHHHHHHHHHHhhc
Confidence            334567899999999999999999999999  99999999999 999999998775 99999999999965         


Q ss_pred             ---------hcccccCCCeEEEeecCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~   96 (100)
                               +||+++.++++||+|||++-
T Consensus       173 rVvHRDLKLENILLD~N~NiKIADFGLSN  201 (668)
T KOG0611|consen  173 RVVHRDLKLENILLDQNNNIKIADFGLSN  201 (668)
T ss_pred             cceecccchhheeecCCCCeeeeccchhh
Confidence                     89999999999999999863

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.78  E-value=1.2e-18  Score=114.51  Aligned_cols=89  Identities=19%  Similarity=0.262  Sum_probs=81.5

Q ss_pred             CCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH--------
Q 034245            8 MEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~--------   76 (100)
                      ++++++...+|+++++.++|||||++++.|+  ..+|++.|+|. +++...++... +++++.++.+.+|++        
T Consensus        58 k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~Krrk-~ltEpEary~l~QIv~GlkYLH~  136 (592)
T KOG0575|consen   58 KPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLKRRK-PLTEPEARYFLRQIVEGLKYLHS  136 (592)
T ss_pred             CcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCCccHHHHHHhcC-CCCcHHHHHHHHHHHHHHHHHHh
Confidence            4566788999999999999999999999999  99999999999 99999998544 599999999999977        


Q ss_pred             ----------hcccccCCCeEEEeecCCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                -|++++.+-.+||+|||||..
T Consensus       137 ~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~  167 (592)
T KOG0575|consen  137 LGIIHRDLKLGNLFLNENMNVKIGDFGLATQ  167 (592)
T ss_pred             cCceecccchhheeecCcCcEEecccceeee
Confidence                      799999999999999999975

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.78  E-value=1e-18  Score=108.97  Aligned_cols=98  Identities=26%  Similarity=0.347  Sum_probs=88.5

Q ss_pred             eeccCCCCcchhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-
Q 034245            2 MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-   76 (100)
Q Consensus         2 ~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-   76 (100)
                      +|.+.+.++.+-..+|||.+|.+++|||||.+.++..    +.+|+|||||..+|...+..-.+++....++.++.|++ 
T Consensus       109 ~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~  188 (419)
T KOG0663|consen  109 LKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLR  188 (419)
T ss_pred             cccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHH
Confidence            4567788888899999999999999999999999988    88999999999999999988777799999999999977 


Q ss_pred             -----------------hcccccCCCeEEEeecCCCCCCC
Q 034245           77 -----------------RCCLLSFGKTVKVADLQALDWPS   99 (100)
Q Consensus        77 -----------------~nil~~~~~~~ki~dfgl~~~~~   99 (100)
                                       .|++++..|.+||+|||+|..-+
T Consensus       189 glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg  228 (419)
T KOG0663|consen  189 GLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYG  228 (419)
T ss_pred             HHHHHhhceeEecccchhheeeccCCcEEecccchhhhhc
Confidence                             89999999999999999997543

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=7.5e-18  Score=107.70  Aligned_cols=85  Identities=22%  Similarity=0.220  Sum_probs=77.0

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--c-cEEEEEeccc-ccHHHHhccCCC-CCCHHHHHHHHHHhH-----------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--Q-GLCLFLEYQA-NDLAYLLKYPKD-SMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~-~~~lv~e~~~-~~l~~~l~~~~~-~~~~~~~~~~~~~~~-----------   76 (100)
                      .+|.+|+.++.+++|||+|++.|+|.  + ...+|+||++ |+|.+.+..... +++|.....++.+++           
T Consensus       116 ~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~  195 (361)
T KOG1187|consen  116 REFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCP  195 (361)
T ss_pred             hHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCC
Confidence            45999999999999999999999999  5 4999999999 999999988765 689999988887766           


Q ss_pred             ----------hcccccCCCeEEEeecCCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                .||+++.++..|++|||+|..
T Consensus       196 ~~iiHrDiKssNILLD~~~~aKlsDFGLa~~  226 (361)
T KOG1187|consen  196 PPIIHRDIKSSNILLDEDFNAKLSDFGLAKL  226 (361)
T ss_pred             CCEecCCCCHHHeeECCCCCEEccCccCccc
Confidence                      899999999999999999854

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.76  E-value=5.2e-18  Score=110.63  Aligned_cols=91  Identities=27%  Similarity=0.327  Sum_probs=79.6

Q ss_pred             CCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH--------
Q 034245            8 MEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~--------   76 (100)
                      ..+....+++|++++++++|||+|+++|+..  .++++++|+|+ |+|.++++.....++......++.+++        
T Consensus       201 ~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~  280 (474)
T KOG0194|consen  201 TKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHS  280 (474)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHH
Confidence            3456678999999999999999999999998  89999999999 999999998775588777777766655        


Q ss_pred             ----------hcccccCCCeEEEeecCCCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                                +|||++.++.+||+|||++...
T Consensus       281 k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~  312 (474)
T KOG0194|consen  281 KNCIHRDIAARNCLYSKKGVVKISDFGLSRAG  312 (474)
T ss_pred             CCCcchhHhHHHheecCCCeEEeCccccccCC
Confidence                      9999999999999999998653

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.75  E-value=8.2e-18  Score=107.02  Aligned_cols=84  Identities=24%  Similarity=0.244  Sum_probs=73.8

Q ss_pred             HHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------------
Q 034245           15 MIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------------   76 (100)
Q Consensus        15 ~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------------   76 (100)
                      ..+|+++|++++|||||++++.|.  ...|+|+||+. |+|++++-.... +.+...+.+.+|++               
T Consensus       223 v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~-l~ed~~K~~f~Qll~avkYLH~~GI~HRD  301 (475)
T KOG0615|consen  223 VQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVANKY-LREDLGKLLFKQLLTAVKYLHSQGIIHRD  301 (475)
T ss_pred             hHHHHHHHHhcCCCCEEEEeeeeecCCceEEEEEEecCccHHHHHHhccc-cccchhHHHHHHHHHHHHHHHHcCccccc
Confidence            579999999999999999999999  77899999999 999999887664 77777777788866               


Q ss_pred             ---hcccccCC---CeEEEeecCCCCCCC
Q 034245           77 ---RCCLLSFG---KTVKVADLQALDWPS   99 (100)
Q Consensus        77 ---~nil~~~~---~~~ki~dfgl~~~~~   99 (100)
                         +||++..+   ..+||+|||+|...+
T Consensus       302 iKPeNILl~~~~e~~llKItDFGlAK~~g  330 (475)
T KOG0615|consen  302 IKPENILLSNDAEDCLLKITDFGLAKVSG  330 (475)
T ss_pred             CCcceEEeccCCcceEEEecccchhhccc
Confidence               99999876   799999999997653

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.74  E-value=8e-18  Score=105.47  Aligned_cols=91  Identities=18%  Similarity=0.206  Sum_probs=80.4

Q ss_pred             CCCCcchhhHHHHHHHHhhCCCCcceeeeeeee--c-cEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----
Q 034245            6 NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVS--Q-GLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----   76 (100)
Q Consensus         6 ~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~-~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----   76 (100)
                      ..++....++.||+++++..+||+||.+++.|.  + .++++||||+ |+|.+.++..+. .++..+..++.+++     
T Consensus       115 ~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g~-i~E~~L~~ia~~VL~GL~Y  193 (364)
T KOG0581|consen  115 NIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRVGR-IPEPVLGKIARAVLRGLSY  193 (364)
T ss_pred             cCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhcCC-CCHHHHHHHHHHHHHHHHH
Confidence            345566788999999999999999999999999  6 4999999999 999999987654 88888888888876     


Q ss_pred             --------------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                    .|++++..|.+||+|||.+..
T Consensus       194 Lh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~  228 (364)
T KOG0581|consen  194 LHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGI  228 (364)
T ss_pred             HhhccCeeeccCCHHHeeeccCCCEEeccccccHH
Confidence                          899999999999999998864

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.74  E-value=5.3e-18  Score=98.77  Aligned_cols=96  Identities=28%  Similarity=0.364  Sum_probs=87.0

Q ss_pred             eeccCCCCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH---
Q 034245            2 MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL---   76 (100)
Q Consensus         2 ~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~---   76 (100)
                      +|+++++++.+.+++||+-++++++|.|||+++++.-  ..+-+|+|||..+|.++..+..+.+....++.++.|++   
T Consensus        35 vrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl  114 (292)
T KOG0662|consen   35 VRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGL  114 (292)
T ss_pred             EeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhh
Confidence            5789999999999999999999999999999999887  88999999999999999888776688888888888866   


Q ss_pred             ---------------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                     +|.++..+|..|++|||++..
T Consensus       115 ~fchshnvlhrdlkpqnllin~ngelkladfglara  150 (292)
T KOG0662|consen  115 GFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARA  150 (292)
T ss_pred             hhhhhhhhhhccCCcceEEeccCCcEEecccchhhh
Confidence                           899999999999999999864

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.73  E-value=4.4e-18  Score=109.70  Aligned_cols=84  Identities=30%  Similarity=0.349  Sum_probs=77.7

Q ss_pred             HHHHHHHHhhCC-CCcceeeeeeee---ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH--------------
Q 034245           15 MIREVSCLMELN-HPNIIRLMLVVS---QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL--------------   76 (100)
Q Consensus        15 ~~~e~~~l~~l~-h~~iv~l~~~~~---~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~--------------   76 (100)
                      -+||+..|+++. ||||+++++++.   ..+++||||++..|++.++.++..|++..++.++.|++              
T Consensus        55 nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHR  134 (538)
T KOG0661|consen   55 NLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHR  134 (538)
T ss_pred             HHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence            468999999997 999999999998   48999999999999999999887899999999999987              


Q ss_pred             ----hcccccCCCeEEEeecCCCCCC
Q 034245           77 ----RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 ----~nil~~~~~~~ki~dfgl~~~~   98 (100)
                          +||++.....+||+|||+|.-.
T Consensus       135 DlKPENiLi~~~~~iKiaDFGLARev  160 (538)
T KOG0661|consen  135 DLKPENILISGNDVIKIADFGLAREV  160 (538)
T ss_pred             cCChhheEecccceeEeccccccccc
Confidence                8999999999999999999643

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.71  E-value=4.3e-17  Score=108.66  Aligned_cols=91  Identities=24%  Similarity=0.340  Sum_probs=82.0

Q ss_pred             CCcchhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245            8 MEEVPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      .++..+.|+.|+.++++++||||+++.|+|. ...|++||.++ |.|..++......++......++.|++         
T Consensus       431 t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSk  510 (974)
T KOG4257|consen  431 TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESK  510 (974)
T ss_pred             ChhhHHHHHHHHHHHHhCCCcchhheeeeeeccceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhh
Confidence            4445788999999999999999999999999 99999999999 999999988777788888888887765         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                               +|+++++...+|++|||++.+.
T Consensus       511 rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~  541 (974)
T KOG4257|consen  511 RFVHRDIAARNILVSSPQCVKLADFGLSRYL  541 (974)
T ss_pred             chhhhhhhhhheeecCcceeeecccchhhhc
Confidence                     9999999999999999998764

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.71  E-value=8.8e-17  Score=102.68  Aligned_cols=86  Identities=27%  Similarity=0.320  Sum_probs=76.2

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee-c--cEEEEEeccc-ccHHHHhccC-CCCCCHHHHHHHHHHhH----------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS-Q--GLCLFLEYQA-NDLAYLLKYP-KDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~-~--~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~~~~----------   76 (100)
                      ..+|.+|+.++.+++|||||+++|+|. .  ...+|+||++ |+|.+++... ...++...+..++.+++          
T Consensus        83 ~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~  162 (362)
T KOG0192|consen   83 RKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEG  162 (362)
T ss_pred             HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            568999999999999999999999999 3  5899999999 9999999773 44599999888887776          


Q ss_pred             ---------hcccccCCC-eEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGK-TVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~-~~ki~dfgl~~~   97 (100)
                               +|++++.++ .+||+|||++..
T Consensus       163 ~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~  193 (362)
T KOG0192|consen  163 PIIHRDLKSDNILVDLKGKTLKIADFGLSRE  193 (362)
T ss_pred             CeeecccChhhEEEcCCCCEEEECCCcccee
Confidence                     789999997 999999999864

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.71  E-value=5.7e-17  Score=99.79  Aligned_cols=87  Identities=17%  Similarity=0.261  Sum_probs=79.1

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      +.+...+|..+|+.+.||+++++++.+.  +.+|++|||.+ |.++.++++.+. ++++.+++++.|+.           
T Consensus        87 QveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~r-F~e~~arFYAAeivlAleylH~~~i  165 (355)
T KOG0616|consen   87 QVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKSGR-FSEPHARFYAAEIVLALEYLHSLDI  165 (355)
T ss_pred             HHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEeccCCccHHHHHHhcCC-CCchhHHHHHHHHHHHHHHHHhcCe
Confidence            4456778999999999999999999999  99999999999 999999998775 99999999998865           


Q ss_pred             -------hcccccCCCeEEEeecCCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                             +|++++++|.+||.|||+|...
T Consensus       166 iYRDLKPENiLlD~~G~iKitDFGFAK~v  194 (355)
T KOG0616|consen  166 IYRDLKPENLLLDQNGHIKITDFGFAKRV  194 (355)
T ss_pred             eeccCChHHeeeccCCcEEEEeccceEEe
Confidence                   9999999999999999999653

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.71  E-value=1.3e-16  Score=99.52  Aligned_cols=97  Identities=30%  Similarity=0.341  Sum_probs=85.2

Q ss_pred             eeccCCCCcchhhHHHHHHHHhhCCCCc-ceeeeeeee--c------cEEEEEecccccHHHHhccCC---CCCCHHHHH
Q 034245            2 MEIHNTMEEVPSSMIREVSCLMELNHPN-IIRLMLVVS--Q------GLCLFLEYQANDLAYLLKYPK---DSMDGYSIK   69 (100)
Q Consensus         2 ~~~~~~~~~~~~~~~~e~~~l~~l~h~~-iv~l~~~~~--~------~~~lv~e~~~~~l~~~l~~~~---~~~~~~~~~   69 (100)
                      ++++.++++.+....||+.+++.++|+| ++.+++++-  +      .+++++||..-+|.+++....   .+++...++
T Consensus        44 irl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik  123 (323)
T KOG0594|consen   44 IRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIK  123 (323)
T ss_pred             EeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeecccHHHHHHhccccccCCCHHHHH
Confidence            4566666788899999999999999999 999999988  4      789999999999999998766   347888899


Q ss_pred             HHHHHhH------------------hcccccCCCeEEEeecCCCCCC
Q 034245           70 FSSSDSL------------------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        70 ~~~~~~~------------------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                      .+++|++                  +|++++..|.+|++|||+|...
T Consensus       124 ~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~  170 (323)
T KOG0594|consen  124 SFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAF  170 (323)
T ss_pred             HHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHh
Confidence            9999977                  8999999999999999998643

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.69  E-value=3.2e-17  Score=110.92  Aligned_cols=89  Identities=24%  Similarity=0.281  Sum_probs=80.2

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      ++++.+|+.|+.++.+++||||++|.|+..  ..+++++||+. |.|..+++.+.+.++.-++..+.++++         
T Consensus       671 ekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm  750 (996)
T KOG0196|consen  671 EKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDM  750 (996)
T ss_pred             HHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhc
Confidence            556778999999999999999999999999  88999999999 999999999887788888777766655         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               +|||++++-.+|++|||++..
T Consensus       751 ~YVHRDLAARNILVNsnLvCKVsDFGLSRv  780 (996)
T KOG0196|consen  751 NYVHRDLAARNILVNSNLVCKVSDFGLSRV  780 (996)
T ss_pred             CchhhhhhhhheeeccceEEEeccccceee
Confidence                     999999999999999999854

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.69  E-value=1.2e-16  Score=106.51  Aligned_cols=89  Identities=26%  Similarity=0.331  Sum_probs=79.6

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      ......+.||+.+++-+.|||+++++++|+  ..+|++.||++ |.|++++-..+. +++..+..+++|++         
T Consensus        53 ~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~gGELFdylv~kG~-l~e~eaa~ff~QIi~gv~yCH~~  131 (786)
T KOG0588|consen   53 SSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVRKGP-LPEREAAHFFRQILDGVSYCHAF  131 (786)
T ss_pred             cccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCCchhHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHhhh
Confidence            344567899999999999999999999999  89999999999 999999987764 99999999998876         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                               +|++++..+.+||+|||.|+..
T Consensus       132 ~icHRDLKpENlLLd~~~nIKIADFGMAsLe  162 (786)
T KOG0588|consen  132 NICHRDLKPENLLLDVKNNIKIADFGMASLE  162 (786)
T ss_pred             cceeccCCchhhhhhcccCEeeeccceeecc
Confidence                     8999998888999999998753

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.67  E-value=4.7e-18  Score=104.19  Aligned_cols=95  Identities=20%  Similarity=0.217  Sum_probs=79.4

Q ss_pred             ccCCCCcchhhHHHHHHHHhhCCCCcceeeee-eee--cc-EEEEEeccc-ccHHHHhccC---CCCCCHHHHHHHHHHh
Q 034245            4 IHNTMEEVPSSMIREVSCLMELNHPNIIRLML-VVS--QG-LCLFLEYQA-NDLAYLLKYP---KDSMDGYSIKFSSSDS   75 (100)
Q Consensus         4 ~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~-~~~--~~-~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~~~~~~   75 (100)
                      ....+.+.++.+..|+.+|++++|||||++++ .+.  +. +++++|+|+ |+|.+.++..   ..-++++.+..+..|+
T Consensus        54 f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL  133 (375)
T KOG0591|consen   54 FGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQL  133 (375)
T ss_pred             hhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHH
Confidence            45566777888999999999999999999988 444  44 899999999 9999998643   2338899998888886


Q ss_pred             H----------------------hcccccCCCeEEEeecCCCCCC
Q 034245           76 L----------------------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        76 ~----------------------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                      +                      .||+++.+|.+|++|||++...
T Consensus       134 ~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l  178 (375)
T KOG0591|consen  134 CRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL  178 (375)
T ss_pred             HHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence            6                      7999999999999999998643

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.67  E-value=5.9e-16  Score=97.01  Aligned_cols=87  Identities=28%  Similarity=0.329  Sum_probs=77.2

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee---c-cEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS---Q-GLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~---~-~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      .+...+|+.+|.+++|||||+++|...   . ..++++||++ |+|.+++...+.+++++.++.+.+|++          
T Consensus        58 ~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g  137 (313)
T KOG0198|consen   58 SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKG  137 (313)
T ss_pred             HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            456889999999999999999999744   3 6899999999 999999998775699999999999977          


Q ss_pred             --------hcccccC-CCeEEEeecCCCCCC
Q 034245           77 --------RCCLLSF-GKTVKVADLQALDWP   98 (100)
Q Consensus        77 --------~nil~~~-~~~~ki~dfgl~~~~   98 (100)
                              +|++++. ++.+||+|||++...
T Consensus       138 ~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~  168 (313)
T KOG0198|consen  138 IVHCDIKPANILLDPSNGDVKLADFGLAKKL  168 (313)
T ss_pred             EeccCcccceEEEeCCCCeEEeccCcccccc
Confidence                    7999998 799999999988754

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.67  E-value=9.5e-17  Score=106.18  Aligned_cols=87  Identities=26%  Similarity=0.379  Sum_probs=74.4

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCC-CHHHHHHHHHHhH----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSM-DGYSIKFSSSDSL----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~-~~~~~~~~~~~~~----------   76 (100)
                      .+.+|.+|+++|.+++||||+++.++|.  ..+++++||+. |+|.+++..+.-+. .......++.|++          
T Consensus       578 ~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n  657 (807)
T KOG1094|consen  578 ARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN  657 (807)
T ss_pred             HHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc
Confidence            4678999999999999999999999999  88999999999 99999998875332 3344455666655          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +||+++.++.+||+|||.+..
T Consensus       658 fVHrd~a~rNcLv~~e~~iKiadfgmsR~  686 (807)
T KOG1094|consen  658 FVHRDLATRNCLVDGEFTIKIADFGMSRN  686 (807)
T ss_pred             hhhccccccceeecCcccEEecCcccccc
Confidence                    999999999999999998873

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.66  E-value=3.3e-16  Score=108.95  Aligned_cols=90  Identities=27%  Similarity=0.384  Sum_probs=79.8

Q ss_pred             CCCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccC------CCCCCHHHHHHHHHHhH-
Q 034245            7 TMEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYP------KDSMDGYSIKFSSSDSL-   76 (100)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~------~~~~~~~~~~~~~~~~~-   76 (100)
                      .+.+...+|++|+.++++++||||+++.|++.  ...++++||+. |+|..+++..      ...++..++..++.+++ 
T Consensus       734 ~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~  813 (1025)
T KOG1095|consen  734 SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAK  813 (1025)
T ss_pred             CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhh
Confidence            34455678999999999999999999999999  88999999999 9999999987      44477888888887776 


Q ss_pred             -----------------hcccccCCCeEEEeecCCCC
Q 034245           77 -----------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -----------------~nil~~~~~~~ki~dfgl~~   96 (100)
                                       +||+++....+||+|||+|.
T Consensus       814 G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlAr  850 (1025)
T KOG1095|consen  814 GMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLAR  850 (1025)
T ss_pred             hhHHHHhCCCcCcchhhhheeecccCcEEEcccchhH
Confidence                             99999999999999999996

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.66  E-value=2.5e-16  Score=104.16  Aligned_cols=88  Identities=24%  Similarity=0.203  Sum_probs=79.1

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------   76 (100)
                      ++..+.+..|+++|+.|+||||++++.+|.    ..+.+++|.+. |+|..+.++++. +....++.|++|++       
T Consensus        82 ~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~~-vn~kaik~W~RQILkGL~yLH  160 (632)
T KOG0584|consen   82 PEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFTSGTLREYRKKHRR-VNIKAIKSWCRQILKGLVYLH  160 (632)
T ss_pred             hHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecccCCcHHHHHHHhcc-CCHHHHHHHHHHHHHHhhhhh
Confidence            334578889999999999999999999999    56889999999 999999998876 88999999999988       


Q ss_pred             -------------hccccc-CCCeEEEeecCCCCC
Q 034245           77 -------------RCCLLS-FGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------------~nil~~-~~~~~ki~dfgl~~~   97 (100)
                                   +||+++ ..|.|||+|+|||..
T Consensus       161 s~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl  195 (632)
T KOG0584|consen  161 SQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATL  195 (632)
T ss_pred             cCCCCccccccccceEEEcCCcCceeecchhHHHH
Confidence                         899998 569999999999864

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.66  E-value=9.8e-16  Score=98.31  Aligned_cols=87  Identities=24%  Similarity=0.316  Sum_probs=77.7

Q ss_pred             chhhHHHHHHHHhhCC-CCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           11 VPSSMIREVSCLMELN-HPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~-h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      ..+.+.||+.+++.+. ||||+++++++.  ...++++||+. |+|++.+... +.+++..+..+++|++          
T Consensus        62 ~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~~-g~l~E~~ar~~F~Qlisav~y~H~~g  140 (370)
T KOG0583|consen   62 LDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVNK-GRLKEDEARKYFRQLISAVAYCHSRG  140 (370)
T ss_pred             cchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHHc-CCCChHHHHHHHHHHHHHHHHHHhCC
Confidence            3455679999999998 999999999999  78999999999 8999999984 4599999999999976          


Q ss_pred             --------hcccccCC-CeEEEeecCCCCCC
Q 034245           77 --------RCCLLSFG-KTVKVADLQALDWP   98 (100)
Q Consensus        77 --------~nil~~~~-~~~ki~dfgl~~~~   98 (100)
                              +|++++.+ +.+||+|||++...
T Consensus       141 i~HRDLK~ENilld~~~~~~Kl~DFG~s~~~  171 (370)
T KOG0583|consen  141 IVHRDLKPENILLDGNEGNLKLSDFGLSAIS  171 (370)
T ss_pred             EeeCCCCHHHEEecCCCCCEEEecccccccc
Confidence                    89999988 99999999998754

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.66  E-value=1.8e-16  Score=106.09  Aligned_cols=90  Identities=21%  Similarity=0.355  Sum_probs=73.2

Q ss_pred             CCCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCC-CCHHHHHHHHHHhH------
Q 034245            7 TMEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDS-MDGYSIKFSSSDSL------   76 (100)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~-~~~~~~~~~~~~~~------   76 (100)
                      ++.-..++|+.|+.+++.++|||+|++.|+|.  ..+|+++||+. |.|.++++..... ++.-.+..+..|+.      
T Consensus       302 EDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYL  381 (1157)
T KOG4278|consen  302 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYL  381 (1157)
T ss_pred             hcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHH
Confidence            44445678999999999999999999999999  88999999999 9999999876532 33333333333332      


Q ss_pred             ------------hcccccCCCeEEEeecCCCC
Q 034245           77 ------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------------~nil~~~~~~~ki~dfgl~~   96 (100)
                                  +||+++.+..+|++|||++.
T Consensus       382 EkknFIHRDLAARNCLVgEnhiVKvADFGLsR  413 (1157)
T KOG4278|consen  382 EKKNFIHRDLAARNCLVGENHIVKVADFGLSR  413 (1157)
T ss_pred             HHhhhhhhhhhhhhccccccceEEeeccchhh
Confidence                        99999999999999999975

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.66  E-value=1.7e-16  Score=97.36  Aligned_cols=86  Identities=19%  Similarity=0.166  Sum_probs=77.6

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ++.-++|+.+|+++ .||+|+++.++++  .++++|+|.++ |.|++++...-. +++...+.+++|+.           
T Consensus        66 ~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~Vt-lSEK~tR~iMrqlfegVeylHa~~I  144 (411)
T KOG0599|consen   66 REATRQEISILRQVMGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSKVT-LSEKETRRIMRQLFEGVEYLHARNI  144 (411)
T ss_pred             HHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhhee-ecHHHHHHHHHHHHHHHHHHHHhhh
Confidence            45678899999998 7999999999999  88999999999 999999987654 88999999999876           


Q ss_pred             -------hcccccCCCeEEEeecCCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                             +||+++.+-++||+|||+|+..
T Consensus       145 VHRDLKpENILlddn~~i~isDFGFa~~l  173 (411)
T KOG0599|consen  145 VHRDLKPENILLDDNMNIKISDFGFACQL  173 (411)
T ss_pred             hhcccChhheeeccccceEEeccceeecc
Confidence                   8999999999999999999864

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.65  E-value=6.1e-16  Score=99.76  Aligned_cols=96  Identities=28%  Similarity=0.299  Sum_probs=83.4

Q ss_pred             eccCCCCcchhhHHHHHHHHhhCCCCcceeeeeeee--cc-EEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH-
Q 034245            3 EIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QG-LCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL-   76 (100)
Q Consensus         3 ~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~-~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~-   76 (100)
                      ++++..+..+..+.+|..++++++|||||.+.+.|.  +. ++++|+||+ |++.+.++... ..+++..+..|+.|++ 
T Consensus        38 ~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~  117 (426)
T KOG0589|consen   38 NLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILL  117 (426)
T ss_pred             eccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHH
Confidence            445555666678999999999999999999999999  66 899999999 99999998765 3489999999988866 


Q ss_pred             -----------------hcccccCCCeEEEeecCCCCCC
Q 034245           77 -----------------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 -----------------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                                       .||++..++.+|++|||+|...
T Consensus       118 av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l  156 (426)
T KOG0589|consen  118 AVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKIL  156 (426)
T ss_pred             HHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhc
Confidence                             8999999999999999999754

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.63  E-value=2e-15  Score=94.79  Aligned_cols=85  Identities=21%  Similarity=0.314  Sum_probs=77.2

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ......+|..+|.+++||+||.++-.|.  ..+|+|+||+. |+|+..+..++. +++..+.++...++           
T Consensus        68 e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~hL~~eg~-F~E~~arfYlaEi~lAL~~LH~~gI  146 (357)
T KOG0598|consen   68 EVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQREGR-FSEDRARFYLAEIVLALGYLHSKGI  146 (357)
T ss_pred             hHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccCCccHHHHHHhcCC-cchhHHHHHHHHHHHHHHHHHhCCe
Confidence            4456788999999999999999999998  99999999999 999999988765 99999998887765           


Q ss_pred             -------hcccccCCCeEEEeecCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~   96 (100)
                             +||+++..|+++++|||++.
T Consensus       147 iyRDlKPENILLd~~GHi~LtDFgL~k  173 (357)
T KOG0598|consen  147 IYRDLKPENILLDEQGHIKLTDFGLCK  173 (357)
T ss_pred             eeccCCHHHeeecCCCcEEEeccccch
Confidence                   99999999999999999986

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.63  E-value=3.5e-16  Score=97.31  Aligned_cols=94  Identities=27%  Similarity=0.330  Sum_probs=81.1

Q ss_pred             ccCCCCcchhhHHHHHHHHhhCCCCcceeeeeeee---ccEEEEEecccccHHHHhccCCC----CCCHHHHHHHHHHhH
Q 034245            4 IHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVS---QGLCLFLEYQANDLAYLLKYPKD----SMDGYSIKFSSSDSL   76 (100)
Q Consensus         4 ~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~---~~~~lv~e~~~~~l~~~l~~~~~----~~~~~~~~~~~~~~~   76 (100)
                      -+.+..+...++.||+.++++++|||++.+..++.   ..+++++||.+.+|.+.++-++.    .++...++.+..|++
T Consensus        63 ~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil  142 (438)
T KOG0666|consen   63 GEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQIL  142 (438)
T ss_pred             ccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHH
Confidence            34456678899999999999999999999999888   78999999999999999976542    277888888888877


Q ss_pred             ------------------hcccccCC----CeEEEeecCCCCC
Q 034245           77 ------------------RCCLLSFG----KTVKVADLQALDW   97 (100)
Q Consensus        77 ------------------~nil~~~~----~~~ki~dfgl~~~   97 (100)
                                        .||++..+    |.+||+|+|++..
T Consensus       143 ~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~  185 (438)
T KOG0666|consen  143 DGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARL  185 (438)
T ss_pred             hhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHH
Confidence                              89999876    8999999999864

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.62  E-value=7e-16  Score=101.00  Aligned_cols=88  Identities=20%  Similarity=0.308  Sum_probs=77.7

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      ....+-+..|+.+++..+|+|+|.+++.|.  +.+|+||||++ |+|.+.+....  +++.++..++++++         
T Consensus       311 Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~~~--~~E~qIA~Icre~l~aL~fLH~~  388 (550)
T KOG0578|consen  311 QPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTKTR--MTEGQIAAICREILQGLKFLHAR  388 (550)
T ss_pred             CCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCchhhhhhccc--ccHHHHHHHHHHHHHHHHHHHhc
Confidence            333466889999999999999999999998  88999999999 99999987654  89999999988866         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                               +||++..+|.+||+|||++...
T Consensus       389 gIiHrDIKSDnILL~~~g~vKltDFGFcaqi  419 (550)
T KOG0578|consen  389 GIIHRDIKSDNILLTMDGSVKLTDFGFCAQI  419 (550)
T ss_pred             ceeeeccccceeEeccCCcEEEeeeeeeecc
Confidence                     8999999999999999998643

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.62  E-value=2.4e-15  Score=97.46  Aligned_cols=85  Identities=26%  Similarity=0.378  Sum_probs=70.5

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      .+...|||.++++++|||+|++.++.-    ..+|+|+|||. |.+...-..... ++..+++.+.+++.          
T Consensus       152 ~ekv~~EIailKkl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~e-ls~~~Ar~ylrDvv~GLEYLH~Qg  230 (576)
T KOG0585|consen  152 IEKVRREIAILKKLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPE-LSEQQARKYLRDVVLGLEYLHYQG  230 (576)
T ss_pred             HHHHHHHHHHHHhcCCcCeeEEEEeecCcccCceEEEEEeccCCccccCCCCccc-ccHHHHHHHHHHHHHHHHHHHhcC
Confidence            357899999999999999999999876    88999999999 876544332222 78888888877754          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              .|++++.+|.+||+|||.+..
T Consensus       231 iiHRDIKPsNLLl~~~g~VKIsDFGVs~~  259 (576)
T KOG0585|consen  231 IIHRDIKPSNLLLSSDGTVKISDFGVSNE  259 (576)
T ss_pred             eeccccchhheEEcCCCcEEeeccceeee
Confidence                    899999999999999998753

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.61  E-value=1.1e-15  Score=101.06  Aligned_cols=88  Identities=24%  Similarity=0.316  Sum_probs=78.5

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      +....+.+|+++++.++||||+.+++.|+  ..+|+|+||+.|+|...+...+. +++..++.+..++.           
T Consensus        43 k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g~L~~il~~d~~-lpEe~v~~~a~~LVsaL~yLhs~ri  121 (808)
T KOG0597|consen   43 KELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVGDLFTILEQDGK-LPEEQVRAIAYDLVSALYYLHSNRI  121 (808)
T ss_pred             HHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhhhHHHHHHhccC-CCHHHHHHHHHHHHHHHHHHHhcCc
Confidence            34556899999999999999999999999  99999999999999999987664 99999998887754           


Q ss_pred             -------hcccccCCCeEEEeecCCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                             +||++...+.+|++|||+|..-
T Consensus       122 lhrd~kPqniLl~~~~~~KlcdFg~Ar~m  150 (808)
T KOG0597|consen  122 LHRDMKPQNILLEKGGTLKLCDFGLARAM  150 (808)
T ss_pred             ccccCCcceeeecCCCceeechhhhhhhc
Confidence                   8999999999999999998653

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.59  E-value=1.4e-15  Score=92.59  Aligned_cols=93  Identities=25%  Similarity=0.312  Sum_probs=82.7

Q ss_pred             cCCCCcchhhHHHHHHHHhhCCCCcceeeeeeee----------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHH
Q 034245            5 HNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVS----------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSD   74 (100)
Q Consensus         5 ~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~----------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~   74 (100)
                      +++.++.....+||+.+|..++|+|++.+.++|.          ..+|+|+++|..+|...+.+....++...+..++.+
T Consensus        53 eneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~  132 (376)
T KOG0669|consen   53 ENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKG  132 (376)
T ss_pred             hccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHH
Confidence            5678888899999999999999999999998886          448999999999999999887666899999888877


Q ss_pred             hH------------------hcccccCCCeEEEeecCCCCC
Q 034245           75 SL------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        75 ~~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      ++                  +|++++.+|.+|++|||+|..
T Consensus       133 Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~  173 (376)
T KOG0669|consen  133 LMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARA  173 (376)
T ss_pred             HHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccc
Confidence            65                  899999999999999999954

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.59  E-value=5e-16  Score=103.27  Aligned_cols=88  Identities=26%  Similarity=0.264  Sum_probs=79.2

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      .++++++|+..|.++.|||+|.+.+.|.  ...|+|||||-|+..+.+..+..|+.+..+..++.+.+            
T Consensus        69 KWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~I  148 (948)
T KOG0577|consen   69 KWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRI  148 (948)
T ss_pred             HHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHH
Confidence            4678999999999999999999999999  88999999999988888888777788888888887765            


Q ss_pred             ------hcccccCCCeEEEeecCCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                            -||+++..|.||++|||-|++.
T Consensus       149 HRDiKAGNILLse~g~VKLaDFGSAsi~  176 (948)
T KOG0577|consen  149 HRDIKAGNILLSEPGLVKLADFGSASIM  176 (948)
T ss_pred             hhhccccceEecCCCeeeeccccchhhc
Confidence                  7999999999999999998764

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.58  E-value=4.8e-15  Score=100.61  Aligned_cols=98  Identities=18%  Similarity=0.168  Sum_probs=81.4

Q ss_pred             eeccCCCCcchhhHHHHHHHHhhCC-CCcceeeeeeee---------ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHH
Q 034245            2 MEIHNTMEEVPSSMIREVSCLMELN-HPNIIRLMLVVS---------QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIK   69 (100)
Q Consensus         2 ~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~---------~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~   69 (100)
                      +|+...++...+.+.+|+.+++.|+ |+|||.+++...         ..+++.||||. |.|.+++.... ..|++..+.
T Consensus        68 Krm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVL  147 (738)
T KOG1989|consen   68 KRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVL  147 (738)
T ss_pred             eeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHH
Confidence            3455557777888999999999996 999999999422         34789999999 89999997432 239999999


Q ss_pred             HHHHHhH--------------------hcccccCCCeEEEeecCCCCCCC
Q 034245           70 FSSSDSL--------------------RCCLLSFGKTVKVADLQALDWPS   99 (100)
Q Consensus        70 ~~~~~~~--------------------~nil~~~~~~~ki~dfgl~~~~~   99 (100)
                      .++.+++                    +|+|++.++..|++|||-|+-+.
T Consensus       148 kIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~  197 (738)
T KOG1989|consen  148 KIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKI  197 (738)
T ss_pred             HHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccccccccc
Confidence            9988866                    99999999999999999887553

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.58  E-value=9.5e-15  Score=94.07  Aligned_cols=91  Identities=22%  Similarity=0.297  Sum_probs=78.2

Q ss_pred             cCCCCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccC-CCCCCHHHHHHHHHHhH----
Q 034245            5 HNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYP-KDSMDGYSIKFSSSDSL----   76 (100)
Q Consensus         5 ~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~~~~----   76 (100)
                      +..+.+ ...+++|+..++.++||||++++..|.  ..+|+||.|+. |++.+.++.. ..++.+..+..+.++++    
T Consensus        62 Ekc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~  140 (516)
T KOG0582|consen   62 EKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALD  140 (516)
T ss_pred             hhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHH
Confidence            333443 567899999999999999999999999  99999999999 9999999763 33489999998888876    


Q ss_pred             --------------hcccccCCCeEEEeecCCCC
Q 034245           77 --------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 --------------~nil~~~~~~~ki~dfgl~~   96 (100)
                                    .||+++.+|.+||+|||...
T Consensus       141 YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa  174 (516)
T KOG0582|consen  141 YLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSA  174 (516)
T ss_pred             HHHhcCceecccccccEEEcCCCcEEEcCceeee
Confidence                          79999999999999999654

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.58  E-value=9.2e-15  Score=91.68  Aligned_cols=87  Identities=23%  Similarity=0.334  Sum_probs=78.6

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee-------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH--------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS-------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~-------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~--------   76 (100)
                      .++..||+.+|+.++|+||+.+.+++.       ..+|+|+|++..+|.+.++.... ++..++..+..|++        
T Consensus        65 akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elMetDL~~iik~~~~-L~d~H~q~f~YQiLrgLKyiHS  143 (359)
T KOG0660|consen   65 AKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELMETDLHQIIKSQQD-LTDDHAQYFLYQILRGLKYIHS  143 (359)
T ss_pred             HHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHHhhHHHHHHHcCcc-ccHHHHHHHHHHHHHhcchhhc
Confidence            467889999999999999999998876       77899999999999999988654 89999999999987        


Q ss_pred             ----------hcccccCCCeEEEeecCCCCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALDWPS   99 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~~~~   99 (100)
                                .|++++.++..||+|||+|...+
T Consensus       144 AnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~  176 (359)
T KOG0660|consen  144 ANVIHRDLKPSNLLLNADCDLKICDFGLARYLD  176 (359)
T ss_pred             ccccccccchhheeeccCCCEEeccccceeecc
Confidence                      79999999999999999998753

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.57  E-value=3.1e-14  Score=90.47  Aligned_cols=85  Identities=20%  Similarity=0.193  Sum_probs=74.6

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  +..++++||++ ++|..++..... ++...+..++.|++            
T Consensus        75 ~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~-~~~~~~~~~~~qi~~aL~~LH~~~iv  153 (340)
T PTZ00426         75 VDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKR-FPNDVGCFYAAQIVLIFEYLQSLNIV  153 (340)
T ss_pred             HHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence            456788999999999999999999998  88999999999 999999876553 88888888887765            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +|++++.++.+|++|||++..
T Consensus       154 HrDLkp~NILl~~~~~ikL~DFG~a~~  180 (340)
T PTZ00426        154 YRDLKPENLLLDKDGFIKMTDFGFAKV  180 (340)
T ss_pred             ccCCCHHHEEECCCCCEEEecCCCCee
Confidence                  899999999999999999853

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.56  E-value=1.8e-14  Score=94.19  Aligned_cols=87  Identities=18%  Similarity=0.281  Sum_probs=76.9

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      .++.+..+.|-.+|...++|++|+++-.|.  ..+|++|||++ |+...++...+. +++..+++++.+..         
T Consensus       182 ~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~~~-L~e~~arfYiaE~vlAI~~iH~~  260 (550)
T KOG0605|consen  182 KNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRKDT-LTEDWARFYIAETVLAIESIHQL  260 (550)
T ss_pred             hhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHhcCc-CchHHHHHHHHHHHHHHHHHHHc
Confidence            344566778999999999999999999999  99999999999 999999988765 99999998887733         


Q ss_pred             ---------hcccccCCCeEEEeecCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~   96 (100)
                               +|+|++..|++|++||||+.
T Consensus       261 gyIHRDIKPdNlLiD~~GHiKLSDFGLs~  289 (550)
T KOG0605|consen  261 GYIHRDIKPDNLLIDAKGHIKLSDFGLST  289 (550)
T ss_pred             CcccccCChhheeecCCCCEeeccccccc
Confidence                     99999999999999999984

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.56  E-value=4.4e-14  Score=93.30  Aligned_cols=86  Identities=19%  Similarity=0.232  Sum_probs=73.2

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccC---CCCCCHHHHHHHHHHhH---------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYP---KDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~~~~~~~---------   76 (100)
                      ...+.+|+.+++.++||||+++++.+.  +..|+++||++ ++|.+.+...   ..+++...+..++.|++         
T Consensus       109 ~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~  188 (478)
T PTZ00267        109 AAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR  188 (478)
T ss_pred             HHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            446778999999999999999999998  89999999999 9998877532   23478888887877765         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               +||+++.++.+|++|||++..
T Consensus       189 ~ivHrDlkp~NIll~~~~~~kL~DFgla~~  218 (478)
T PTZ00267        189 KMMHRDLKSANIFLMPTGIIKLGDFGFSKQ  218 (478)
T ss_pred             CEEECCcCHHhEEECCCCcEEEEeCcCcee
Confidence                     899999999999999999864

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.55  E-value=4.9e-14  Score=89.03  Aligned_cols=85  Identities=26%  Similarity=0.323  Sum_probs=74.2

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  +..++++||++ ++|...+..... ++...+..++.|++            
T Consensus        62 ~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~~iv  140 (329)
T PTZ00263         62 VQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGR-FPNDVAKFYHAELVLAFEYLHSKDII  140 (329)
T ss_pred             HHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            456889999999999999999999988  88999999999 999999876543 78888877777765            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +||+++.++.+||+|||++..
T Consensus       141 H~dlkp~NIll~~~~~~kl~Dfg~~~~  167 (329)
T PTZ00263        141 YRDLKPENLLLDNKGHVKVTDFGFAKK  167 (329)
T ss_pred             ecCCCHHHEEECCCCCEEEeeccCceE
Confidence                  899999999999999998754

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.55  E-value=8.4e-14  Score=86.39  Aligned_cols=86  Identities=30%  Similarity=0.356  Sum_probs=74.3

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  ...++++||+++++.+.+......++...+..++.|++             
T Consensus        47 ~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH  126 (288)
T cd07871          47 PCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILH  126 (288)
T ss_pred             chhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence            456789999999999999999999988  77899999999999888876554478888888877765             


Q ss_pred             -----hcccccCCCeEEEeecCCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~~   97 (100)
                           +|++++.++.+|++|||++..
T Consensus       127 ~dlkp~Nil~~~~~~~kl~DfG~~~~  152 (288)
T cd07871         127 RDLKPQNLLINEKGELKLADFGLARA  152 (288)
T ss_pred             CCCCHHHEEECCCCCEEECcCcceee
Confidence                 899999999999999998753

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.55  E-value=2.7e-14  Score=94.41  Aligned_cols=84  Identities=27%  Similarity=0.363  Sum_probs=74.0

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      .+..-||+++++.+.|||||+++++..  ..+|+|+||+. |++++.+..++. +....+...+.|+.            
T Consensus        99 ~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~~gr-~~e~~ar~~F~q~vsaveYcH~k~iv  177 (596)
T KOG0586|consen   99 RQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGGELFDYLVKHGR-MKEKEARAKFRQIVSAVEYCHSKNIV  177 (596)
T ss_pred             HHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCchhHHHHHhccc-chhhhhhhhhHHHHHHHHHHhhccee
Confidence            455789999999999999999999998  99999999999 999999988875 66677777777754            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +|++++.+.++||+|||++-
T Consensus       178 HrdLk~eNilL~~~mnikIaDfgfS~  203 (596)
T KOG0586|consen  178 HRDLKAENILLDENMNIKIADFGFST  203 (596)
T ss_pred             ccccchhhcccccccceeeeccccce
Confidence                  89999999999999999874

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.54  E-value=5.3e-14  Score=88.38  Aligned_cols=84  Identities=24%  Similarity=0.256  Sum_probs=73.6

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ..+.+|+.++++++||||+++++.+.  +..|+++||++ ++|.+.+.... .+++..+..++.|++             
T Consensus        43 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H  121 (318)
T cd05582          43 VRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHSLGIIY  121 (318)
T ss_pred             HHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEec
Confidence            45678999999999999999999988  88999999999 99999887654 388888888888866             


Q ss_pred             -----hcccccCCCeEEEeecCCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~~   97 (100)
                           +|++++.++.+|++|||++..
T Consensus       122 ~dlkp~Nil~~~~~~~kL~Dfg~~~~  147 (318)
T cd05582         122 RDLKPENILLDEEGHIKLTDFGLSKE  147 (318)
T ss_pred             CCCCHHHeEECCCCcEEEeeccCCcc
Confidence                 899999999999999998754

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.54  E-value=6.6e-15  Score=91.68  Aligned_cols=87  Identities=16%  Similarity=0.239  Sum_probs=76.9

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ..+++++|+.++.+.++|++|+++|.+.  ..+|+|||||. |++.+.++..+.++++..+..+.+.-+           
T Consensus        71 DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~K  150 (502)
T KOG0574|consen   71 DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKK  150 (502)
T ss_pred             hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHH
Confidence            3578999999999999999999999988  89999999999 999999998877788888766654433           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             -||++..+|..|++|||.|..
T Consensus       151 IHRDIKAGNILLNT~G~AKLADFGVAGQ  178 (502)
T KOG0574|consen  151 IHRDIKAGNILLNTDGIAKLADFGVAGQ  178 (502)
T ss_pred             HHhhcccccEEEcccchhhhhhccccch
Confidence                   799999999999999999864

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.54  E-value=6.6e-14  Score=89.81  Aligned_cols=84  Identities=20%  Similarity=0.286  Sum_probs=73.8

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  ...|+++||++ ++|.+.+.... .++...+..++.|++            
T Consensus        45 ~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH~~giv  123 (377)
T cd05629          45 LAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYD-TFSEDVTRFYMAECVLAIEAVHKLGFI  123 (377)
T ss_pred             HHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            355778999999999999999999998  88999999999 99999987654 388888888887765            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +||+++.++.+|++|||++.
T Consensus       124 HrDlkp~NIll~~~~~~kl~DfGla~  149 (377)
T cd05629         124 HRDIKPDNILIDRGGHIKLSDFGLST  149 (377)
T ss_pred             ccCCCHHHEEECCCCCEEEeeccccc
Confidence                  89999999999999999984

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.54  E-value=8.6e-14  Score=89.23  Aligned_cols=84  Identities=15%  Similarity=0.218  Sum_probs=73.7

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|+|++++++.+.  +.+++++||++ ++|.+.+..... ++...+..++.|++            
T Consensus        45 ~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~-~~~~~~~~~~~qi~~al~~lH~~~iv  123 (376)
T cd05598          45 AAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGI-FEEDLARFYIAELTCAIESVHKMGFI  123 (376)
T ss_pred             HHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence            456788999999999999999999988  88999999999 999999877553 78888887777765            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +||+++.++.+||+|||++.
T Consensus       124 HrDlkp~Nill~~~~~ikL~DFG~a~  149 (376)
T cd05598         124 HRDIKPDNILIDRDGHIKLTDFGLCT  149 (376)
T ss_pred             eCCCCHHHEEECCCCCEEEEeCCCCc
Confidence                  89999999999999999974

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.54  E-value=7.5e-14  Score=87.98  Aligned_cols=84  Identities=18%  Similarity=0.342  Sum_probs=73.8

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++.+.+.  +..++++||++ ++|...+.... .+++..+..++.|++            
T Consensus        39 ~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~lH~~~iv  117 (323)
T cd05571          39 VAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALGYLHSCDVV  117 (323)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence            346778999999999999999999888  88999999999 99988887654 388888888888866            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +||+++.++.+||+|||++.
T Consensus       118 HrDlkp~NIll~~~~~~kl~DfG~a~  143 (323)
T cd05571         118 YRDLKLENLMLDKDGHIKITDFGLCK  143 (323)
T ss_pred             eCCCCHHHEEECCCCCEEEeeCCCCc
Confidence                  89999999999999999875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.54  E-value=6.7e-14  Score=89.93  Aligned_cols=84  Identities=17%  Similarity=0.211  Sum_probs=73.6

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  ..+++++||++ |+|...+.... .++...+..++.|++            
T Consensus        45 ~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~al~~lH~~~iv  123 (382)
T cd05625          45 VAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMG-IFPEDLARFYIAELTCAVESVHKMGFI  123 (382)
T ss_pred             HHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            456788999999999999999999998  88999999999 99999887654 378888888877765            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +||+++.++.+||+|||++.
T Consensus       124 HrDlKp~NILl~~~g~~kL~DFGla~  149 (382)
T cd05625         124 HRDIKPDNILIDRDGHIKLTDFGLCT  149 (382)
T ss_pred             cCCCCHHHEEECCCCCEEEeECCCCc
Confidence                  89999999999999999974

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.54  E-value=8.2e-14  Score=89.04  Aligned_cols=85  Identities=18%  Similarity=0.249  Sum_probs=74.7

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.++..++|++++++++.+.  ..+|+++||++ ++|.+.+.... .++...+..++.|++            
T Consensus        45 ~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~~giv  123 (363)
T cd05628          45 VGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKD-TLTEEETQFYIAETVLAIDSIHQLGFI  123 (363)
T ss_pred             HHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence            346778999999999999999999988  88999999999 99999987654 388889888888865            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +||+++.++.+||+|||++..
T Consensus       124 HrDlKp~NILi~~~~~vkL~DFGla~~  150 (363)
T cd05628         124 HRDIKPDNLLLDSKGHVKLSDFGLCTG  150 (363)
T ss_pred             ecCCCHHHeEECCCCCEEEeeccCccc
Confidence                  899999999999999999753

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.53  E-value=1.6e-13  Score=83.93  Aligned_cols=85  Identities=24%  Similarity=0.312  Sum_probs=74.8

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      .+.+.+|+.++++++|||++++.+.+. ...++++||++ ++|.+++......++...+..++.|++             
T Consensus        39 ~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H  118 (257)
T cd05115          39 RDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVH  118 (257)
T ss_pred             HHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeee
Confidence            456889999999999999999999888 88899999999 999999876544588888888888765             


Q ss_pred             -----hcccccCCCeEEEeecCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~   96 (100)
                           +|++++.++.+|++|||++.
T Consensus       119 ~dlkp~nil~~~~~~~kl~dfg~~~  143 (257)
T cd05115         119 RDLAARNVLLVNQHYAKISDFGLSK  143 (257)
T ss_pred             cccchheEEEcCCCcEEeccCCccc
Confidence                 89999999999999999875

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.53  E-value=7.3e-14  Score=91.71  Aligned_cols=83  Identities=28%  Similarity=0.448  Sum_probs=75.6

Q ss_pred             HHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH--------------
Q 034245           15 MIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL--------------   76 (100)
Q Consensus        15 ~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~--------------   76 (100)
                      +.+|-..|..+ .||.+++|+-.|.  ..+|+++||++ |+|.+.|...+. +.+...+.+..+++              
T Consensus       120 V~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~Gs-fde~caR~YAAeIldAleylH~~GIIHR  198 (604)
T KOG0592|consen  120 VTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKYGS-FDETCARFYAAEILDALEYLHSNGIIHR  198 (604)
T ss_pred             hhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHHhCc-chHHHHHHHHHHHHHHHHHHHhcCceec
Confidence            55788888888 8999999999999  99999999999 999999998875 99999999988876              


Q ss_pred             ----hcccccCCCeEEEeecCCCCCC
Q 034245           77 ----RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 ----~nil~~~~~~~ki~dfgl~~~~   98 (100)
                          +|||++.++++||+|||-|.+.
T Consensus       199 DlKPENILLd~dmhikITDFGsAK~l  224 (604)
T KOG0592|consen  199 DLKPENILLDKDGHIKITDFGSAKIL  224 (604)
T ss_pred             cCChhheeEcCCCcEEEeeccccccC
Confidence                9999999999999999988654

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.53  E-value=1.1e-13  Score=86.88  Aligned_cols=85  Identities=20%  Similarity=0.301  Sum_probs=74.3

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++.+.+.  +..++++||++ ++|.+.+.... .++...+..++.|++            
T Consensus        37 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~  115 (312)
T cd05585          37 VTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQREG-RFDLSRARFYTAELLCALENLHKFNVI  115 (312)
T ss_pred             HHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence            456788999999999999999999888  88999999999 99999987654 388888888887765            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +|++++.++.+|++|||++..
T Consensus       116 HrDlkp~Nili~~~~~~kl~Dfg~~~~  142 (312)
T cd05585         116 YRDLKPENILLDYQGHIALCDFGLCKL  142 (312)
T ss_pred             eCCCCHHHeEECCCCcEEEEECccccc
Confidence                  899999999999999998753

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.53  E-value=1.5e-13  Score=85.70  Aligned_cols=85  Identities=28%  Similarity=0.347  Sum_probs=74.0

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  ...++++||+++++.+.+......++...+..++.|++             
T Consensus        47 ~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH  126 (303)
T cd07869          47 PFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILH  126 (303)
T ss_pred             chhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence            345789999999999999999999988  88999999999888888776555588888888888866             


Q ss_pred             -----hcccccCCCeEEEeecCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~   96 (100)
                           +||+++.++.+|++|||++.
T Consensus       127 ~dlkp~Nill~~~~~~kl~Dfg~~~  151 (303)
T cd07869         127 RDLKPQNLLISDTGELKLADFGLAR  151 (303)
T ss_pred             CCCCHHHEEECCCCCEEECCCCcce
Confidence                 89999999999999999875

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.53  E-value=8.6e-14  Score=85.26  Aligned_cols=87  Identities=24%  Similarity=0.274  Sum_probs=74.2

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccC-CCCCCHHHHHHHHHHhH----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYP-KDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~~~~----------   76 (100)
                      ....+.+|+..+++++|||++++++.+.  ...++++||++ |+|.+++... ...+++.....++.|++          
T Consensus        44 ~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~  123 (259)
T PF07714_consen   44 EEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN  123 (259)
T ss_dssp             HHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            3578999999999999999999999998  77999999999 9999999886 34488888888888876          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +|++++.++.+|++|||++..
T Consensus       124 iiH~~l~~~nill~~~~~~Kl~~f~~~~~  152 (259)
T PF07714_consen  124 IIHGNLSPSNILLDSNGQVKLSDFGLSRP  152 (259)
T ss_dssp             EEEST-SGGGEEEETTTEEEEESTTTGEE
T ss_pred             ccccccccccccccccccccccccccccc
Confidence                    899999999999999998754

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.53  E-value=1.3e-13  Score=85.12  Aligned_cols=87  Identities=24%  Similarity=0.306  Sum_probs=73.7

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      ....+.+|+.+++.++|||++++.+.+.    ...++++||++ ++|.+++......+++..+..++.|++         
T Consensus        48 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~  127 (284)
T cd05081          48 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSK  127 (284)
T ss_pred             HHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3457889999999999999999999875    56899999999 999999876544478888877777765         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               +||+++.++.+|++|||++..
T Consensus       128 ~i~H~dlkp~nili~~~~~~~l~dfg~~~~  157 (284)
T cd05081         128 RYVHRDLATRNILVESENRVKIGDFGLTKV  157 (284)
T ss_pred             CceeccCCHhhEEECCCCeEEECCCccccc
Confidence                     899999999999999998763

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.53  E-value=8.9e-14  Score=88.74  Aligned_cols=85  Identities=20%  Similarity=0.298  Sum_probs=74.9

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.++..++|||++++++.+.  ...++++||++ ++|.+.+.... .++...+..++.|++           
T Consensus        44 ~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~~~i  122 (364)
T cd05599          44 QVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKD-TFTEEETRFYIAETILAIDSIHKLGY  122 (364)
T ss_pred             HHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            3455778999999999999999999998  88999999999 99999987654 388889888888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~   96 (100)
                             +||+++.++.+|++|||++.
T Consensus       123 vH~Dlkp~NIl~~~~~~~kl~Dfg~~~  149 (364)
T cd05599         123 IHRDIKPDNLLLDAKGHIKLSDFGLCT  149 (364)
T ss_pred             EeccCCHHHeEECCCCCEEEeecccce
Confidence                   89999999999999999875

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.53  E-value=1.2e-13  Score=85.31  Aligned_cols=89  Identities=22%  Similarity=0.285  Sum_probs=72.6

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      +.....+.+|+.+++.++|||++++++.+.  +..++++||+++.+...+......++...+..++.|++          
T Consensus        41 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~  120 (287)
T cd07848          41 EEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKND  120 (287)
T ss_pred             ccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            334567889999999999999999999988  88999999999444444444334488888888888866          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +|++++.++.+|++|||++..
T Consensus       121 i~H~dlkp~Nill~~~~~~kl~Dfg~~~~  149 (287)
T cd07848         121 IVHRDIKPENLLISHNDVLKLCDFGFARN  149 (287)
T ss_pred             eecCCCCHHHEEEcCCCcEEEeeccCccc
Confidence                    899999999999999998854

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.53  E-value=1.2e-13  Score=88.86  Aligned_cols=84  Identities=15%  Similarity=0.235  Sum_probs=73.8

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  ...++++||++ ++|.+.+..... +++..+..++.|++            
T Consensus        45 ~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~-~~e~~~~~~~~qi~~aL~~LH~~giv  123 (381)
T cd05626          45 VAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEV-FPEVLARFYIAELTLAIESVHKMGFI  123 (381)
T ss_pred             HHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            456888999999999999999999998  88999999999 999999876553 78888888877765            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +||+++.++.+|++|||++.
T Consensus       124 HrDlKp~Nili~~~~~~kL~DFGl~~  149 (381)
T cd05626         124 HRDIKPDNILIDLDGHIKLTDFGLCT  149 (381)
T ss_pred             ecCCcHHHEEECCCCCEEEeeCcCCc
Confidence                  89999999999999999874

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.52  E-value=1.7e-13  Score=86.58  Aligned_cols=85  Identities=16%  Similarity=0.236  Sum_probs=74.4

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.++..++|||++++++.+.  ...++++||++ ++|..++.... .+++..+..++.|++            
T Consensus        45 ~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~iv  123 (333)
T cd05600          45 VRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLG-VLSEDHARFYMAEMFEAVDALHELGYI  123 (333)
T ss_pred             HHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            456788999999999999999999988  88999999999 99999987654 388888888887765            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +||+++.++.+||+|||++..
T Consensus       124 H~dlkp~Nil~~~~~~~kL~Dfg~a~~  150 (333)
T cd05600         124 HRDLKPENFLIDASGHIKLTDFGLSKG  150 (333)
T ss_pred             ccCCCHHHEEECCCCCEEEEeCcCCcc
Confidence                  899999999999999998864

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.52  E-value=5.3e-14  Score=87.45  Aligned_cols=85  Identities=24%  Similarity=0.298  Sum_probs=74.0

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  ...++++||++ ++|.+.+.... .++...+..++.|++            
T Consensus        45 ~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~  123 (291)
T cd05612          45 EQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSG-RFSNSTGLFYASEIVCALEYLHSKEIV  123 (291)
T ss_pred             HHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            456788999999999999999998888  88999999999 99999987655 388888888877765            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +||+++.++.+|++|||++..
T Consensus       124 H~dlkp~NIli~~~~~~kl~Dfg~~~~  150 (291)
T cd05612         124 YRDLKPENILLDKEGHIKLTDFGFAKK  150 (291)
T ss_pred             ecCCCHHHeEECCCCCEEEEecCcchh
Confidence                  899999999999999998753

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.52  E-value=3.2e-14  Score=96.18  Aligned_cols=88  Identities=26%  Similarity=0.292  Sum_probs=75.6

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccC-CCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYP-KDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+|+||+..+.+++|+|+++++|++. ..+.+|+|+++ |+|.+++++. ...|....+-.++.|++           
T Consensus       154 ~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrl  233 (1039)
T KOG0199|consen  154 IMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRL  233 (1039)
T ss_pred             hHHHHHHHHHHHHhccCcceeEEeeeeccchhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhh
Confidence            4567999999999999999999999999 88999999999 9999999883 33366666666666655           


Q ss_pred             -------hcccccCCCeEEEeecCCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                             +|+++.....+||+|||+....
T Consensus       234 vHRDLAARNlllasprtVKI~DFGLmRaL  262 (1039)
T KOG0199|consen  234 VHRDLAARNLLLASPRTVKICDFGLMRAL  262 (1039)
T ss_pred             hhhhhhhhhheecccceeeeecccceecc
Confidence                   9999999999999999997654

>PHA02988 hypothetical protein; Provisional

Probab=99.52  E-value=1.8e-13  Score=84.90  Aligned_cols=84  Identities=19%  Similarity=0.144  Sum_probs=70.1

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee------ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH--------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS------QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~------~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~--------   76 (100)
                      ...+.+|+.++++++|||++++++.+.      ...++++||++ |+|.+.+..... +++.....++.+++        
T Consensus        62 ~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~-~~~~~~~~i~~~i~~~l~~lH~  140 (283)
T PHA02988         62 IDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKD-LSFKTKLDMAIDCCKGLYNLYK  140 (283)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhCCC-CChhHHHHHHHHHHHHHHHHHh
Confidence            356779999999999999999999875      36789999999 999999987543 77766666655544        


Q ss_pred             -----------hcccccCCCeEEEeecCCCC
Q 034245           77 -----------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -----------~nil~~~~~~~ki~dfgl~~   96 (100)
                                 +|++++.++.+|++|||++.
T Consensus       141 ~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~  171 (283)
T PHA02988        141 YTNKPYKNLTSVSFLVTENYKLKIICHGLEK  171 (283)
T ss_pred             cCCCCCCcCChhhEEECCCCcEEEcccchHh
Confidence                       88999999999999999875

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.52  E-value=1.9e-13  Score=86.38  Aligned_cols=86  Identities=17%  Similarity=0.306  Sum_probs=74.3

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++|||++++.+.+.  ...++++||++ +++...+.... .+++..+..++.|++           
T Consensus        38 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~~i  116 (328)
T cd05593          38 EVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRER-VFSEDRTRFYGAEIVSALDYLHSGKI  116 (328)
T ss_pred             HHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            3456788999999999999999999888  88999999999 99988887654 388888888887765           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+|++|||++..
T Consensus       117 vHrDikp~NIll~~~~~~kL~DfG~~~~  144 (328)
T cd05593         117 VYRDLKLENLMLDKDGHIKITDFGLCKE  144 (328)
T ss_pred             EecccCHHHeEECCCCcEEEecCcCCcc
Confidence                   899999999999999998753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.51  E-value=9.4e-15  Score=99.92  Aligned_cols=95  Identities=19%  Similarity=0.224  Sum_probs=85.3

Q ss_pred             cCCCCcchhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------
Q 034245            5 HNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------   76 (100)
Q Consensus         5 ~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------   76 (100)
                      +....+...+++.|+-.+..++|||++++.++|. +.+.++++|++ |+|.++++.++.++.......|+.|++      
T Consensus       735 ~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YL  814 (1177)
T KOG1025|consen  735 EFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYL  814 (1177)
T ss_pred             ccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHH
Confidence            3445555788999999999999999999999999 88999999999 999999999887788889999988877      


Q ss_pred             ------------hcccccCCCeEEEeecCCCCCCC
Q 034245           77 ------------RCCLLSFGKTVKVADLQALDWPS   99 (100)
Q Consensus        77 ------------~nil~~~~~~~ki~dfgl~~~~~   99 (100)
                                  +|+++.....+||.|||+|....
T Consensus       815 e~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~  849 (1177)
T KOG1025|consen  815 EEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLA  849 (1177)
T ss_pred             HhcchhhhhhhhhheeecCCCeEEEEecchhhccC
Confidence                        99999999999999999987654

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.51  E-value=1.6e-13  Score=86.47  Aligned_cols=83  Identities=24%  Similarity=0.245  Sum_probs=71.6

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ..+.+|+.+++.++||||+++++.+.  +..|+++||++ ++|...+..... +....+..++.|++             
T Consensus        45 ~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~ivH  123 (323)
T cd05584          45 AHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGI-FMEDTACFYLSEISLALEHLHQQGIIY  123 (323)
T ss_pred             HHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeCCCCchHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence            45678999999999999999999988  88999999999 999998876543 77777777777765             


Q ss_pred             -----hcccccCCCeEEEeecCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~   96 (100)
                           +|++++.++.+||+|||++.
T Consensus       124 ~dlkp~Nil~~~~~~~kl~Dfg~~~  148 (323)
T cd05584         124 RDLKPENILLDAQGHVKLTDFGLCK  148 (323)
T ss_pred             CCCCHHHeEECCCCCEEEeeCcCCe
Confidence                 89999999999999999874

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.51  E-value=1.1e-13  Score=87.22  Aligned_cols=84  Identities=18%  Similarity=0.346  Sum_probs=73.0

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++.+.+.  ...++++||++ ++|...+.... .+++..+..++.|++            
T Consensus        39 ~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~iv  117 (323)
T cd05595          39 VAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVV  117 (323)
T ss_pred             HHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence            345678999999999999999999888  88999999999 99988887654 388888888887765            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +||+++.++.+|++|||++.
T Consensus       118 H~Dlkp~NIll~~~~~~kL~Dfg~~~  143 (323)
T cd05595         118 YRDIKLENLMLDKDGHIKITDFGLCK  143 (323)
T ss_pred             ecCCCHHHEEEcCCCCEEecccHHhc
Confidence                  89999999999999999865

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.51  E-value=4.1e-13  Score=81.80  Aligned_cols=86  Identities=24%  Similarity=0.386  Sum_probs=73.8

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  ...++++||++ ++|.+.+......+++..+..++.|++            
T Consensus        43 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~  122 (256)
T cd05114          43 EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFI  122 (256)
T ss_pred             HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            457889999999999999999999988  88999999999 999998875443478888777777755            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +|++++.++.+|++|||.+..
T Consensus       123 H~dl~p~ni~i~~~~~~kl~d~g~~~~  149 (256)
T cd05114         123 HRDLAARNCLVSSTGVVKVSDFGMTRY  149 (256)
T ss_pred             ccccCcceEEEcCCCeEEECCCCCccc
Confidence                  899999999999999998753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.51  E-value=1.8e-13  Score=86.67  Aligned_cols=84  Identities=19%  Similarity=0.224  Sum_probs=72.2

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  +..++++||++ ++|.+++..... ++...+..++.|++            
T Consensus        47 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~l~~~l~~lH~~~~i  125 (333)
T cd06650          47 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKHKI  125 (333)
T ss_pred             HHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHhcCCE
Confidence            456889999999999999999999998  88999999999 999999876543 77777766666654            


Q ss_pred             -------hcccccCCCeEEEeecCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~   96 (100)
                             +|++++.++.+|++|||++.
T Consensus       126 vH~dlkp~Nili~~~~~~kL~Dfg~~~  152 (333)
T cd06650         126 MHRDVKPSNILVNSRGEIKLCDFGVSG  152 (333)
T ss_pred             EecCCChhhEEEcCCCCEEEeeCCcch
Confidence                   88999999999999999875

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.51  E-value=2.4e-13  Score=85.76  Aligned_cols=84  Identities=20%  Similarity=0.336  Sum_probs=72.5

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee-------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH--------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS-------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~-------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~--------   76 (100)
                      ...+.+|+.+++.++|||++++.+++.       ...|+++||+++++.+.+..... +++..+..++.|++        
T Consensus        43 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~aL~~LH~  121 (338)
T cd07859          43 ATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKANDD-LTPEHHQFFLYQLLRALKYIHT  121 (338)
T ss_pred             HHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCCCCHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHH
Confidence            346889999999999999999998875       24799999999889888876543 88888888888866        


Q ss_pred             ----------hcccccCCCeEEEeecCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~   96 (100)
                                +||+++.++.+||+|||++.
T Consensus       122 ~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~  151 (338)
T cd07859         122 ANVFHRDLKPKNILANADCKLKICDFGLAR  151 (338)
T ss_pred             CCeecCCCCHHHeEECCCCcEEEccCcccc
Confidence                      89999999999999999875

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.50  E-value=4.4e-13  Score=81.73  Aligned_cols=85  Identities=28%  Similarity=0.396  Sum_probs=73.4

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  +..++++||++ ++|.+++......+++..+..++.|++            
T Consensus        43 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~  122 (256)
T cd05059          43 EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFI  122 (256)
T ss_pred             HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            346889999999999999999999888  88999999999 999999876544478888888877765            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +|++++.++.+|++|||++.
T Consensus       123 H~dl~p~ni~i~~~~~~kl~dfg~~~  148 (256)
T cd05059         123 HRDLAARNCLVGEDNVVKVSDFGLAR  148 (256)
T ss_pred             cccccHhhEEECCCCcEEECCcccce
Confidence                  89999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.50  E-value=2.3e-13  Score=86.01  Aligned_cols=86  Identities=21%  Similarity=0.235  Sum_probs=73.6

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.++++++|||++++++.+.  +..++++||++ ++|.+++..... ++...+..++.|++           
T Consensus        46 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~l~~lH~~~~  124 (331)
T cd06649          46 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR-IPEEILGKVSIAVLRGLAYLREKHQ  124 (331)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHhhcCC
Confidence            3457889999999999999999999988  88999999999 999999876543 77777777766654           


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +|++++.++.+|++|||++..
T Consensus       125 ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~  153 (331)
T cd06649         125 IMHRDVKPSNILVNSRGEIKLCDFGVSGQ  153 (331)
T ss_pred             EEcCCCChhhEEEcCCCcEEEccCccccc
Confidence                    789999999999999998753

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.50  E-value=3e-13  Score=82.17  Aligned_cols=87  Identities=21%  Similarity=0.356  Sum_probs=74.6

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|++++++++|||++++.+.+.  ...++++||++ +++.+++......+++..+..+..|++           
T Consensus        36 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i  115 (252)
T cd05084          36 LKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHC  115 (252)
T ss_pred             HHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            3456899999999999999999999988  88999999999 999999876554478888887777755           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +|++++.++.+|++|||++..
T Consensus       116 ~H~dl~p~nil~~~~~~~kl~dfg~~~~  143 (252)
T cd05084         116 IHRDLAARNCLVTEKNVLKISDFGMSRE  143 (252)
T ss_pred             cccccchheEEEcCCCcEEECccccCcc
Confidence                   899999999999999998753

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.50  E-value=3.2e-13  Score=86.20  Aligned_cols=85  Identities=18%  Similarity=0.281  Sum_probs=74.5

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.++..++||+++++++.+.  ...++++||++ ++|.+.+..... ++...+..++.|++           
T Consensus        44 ~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~-l~~~~~~~~~~qi~~~L~~lH~~gi  122 (360)
T cd05627          44 QVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDT-LSEEATQFYIAETVLAIDAIHQLGF  122 (360)
T ss_pred             hHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            3456778999999999999999999988  88999999999 999999876543 88888888888865           


Q ss_pred             -------hcccccCCCeEEEeecCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~   96 (100)
                             +||+++.++.+|++|||++.
T Consensus       123 vHrDLkp~NIli~~~~~vkL~DfG~~~  149 (360)
T cd05627         123 IHRDIKPDNLLLDAKGHVKLSDFGLCT  149 (360)
T ss_pred             EccCCCHHHEEECCCCCEEEeeccCCc
Confidence                   89999999999999999875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.50  E-value=4.6e-13  Score=81.78  Aligned_cols=85  Identities=22%  Similarity=0.319  Sum_probs=74.0

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+..+++++|||++++++.+.  ...++++||+. +++.+.+......+++..+..++.|++            
T Consensus        43 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~  122 (256)
T cd05113          43 EDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFI  122 (256)
T ss_pred             HHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            356889999999999999999999988  77899999999 999999876544588888888888766            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +|++++.++.+|++|||.+.
T Consensus       123 H~dl~p~nili~~~~~~kl~d~g~~~  148 (256)
T cd05113         123 HRDLAARNCLVDDQGCVKVSDFGLSR  148 (256)
T ss_pred             ccccCcceEEEcCCCCEEECCCccce
Confidence                  89999999999999999764

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.49  E-value=2.9e-13  Score=84.96  Aligned_cols=88  Identities=15%  Similarity=0.207  Sum_probs=76.1

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+.+.+|+.+++.++|||++++++.+. ...+++++|++ |++.+.+......++...+..++.|++           
T Consensus        51 ~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i  130 (316)
T cd05108          51 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRL  130 (316)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCe
Confidence            34567889999999999999999999998 77889999999 999999987654578888887777766           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +|++++.++.+|++|||++..
T Consensus       131 iH~dlkp~Nill~~~~~~kl~DfG~a~~  158 (316)
T cd05108         131 VHRDLAARNVLVKTPQHVKITDFGLAKL  158 (316)
T ss_pred             eccccchhheEecCCCcEEEcccccccc
Confidence                   899999999999999999864

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.49  E-value=3.6e-13  Score=87.10  Aligned_cols=84  Identities=23%  Similarity=0.268  Sum_probs=73.2

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH--------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL--------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~--------------   76 (100)
                      ..+.+|+.+++.++||||+++++.+.  ...++++|++.+++...+..... ++...+..++.|++              
T Consensus       128 ~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~-l~~~~~~~i~~qi~~aL~ylH~~~IvHr  206 (391)
T PHA03212        128 GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYKTDLYCYLAAKRN-IAICDILAIERSVLRAIQYLHENRIIHR  206 (391)
T ss_pred             hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence            45789999999999999999999988  77899999998888888876543 88888888888866              


Q ss_pred             ----hcccccCCCeEEEeecCCCCC
Q 034245           77 ----RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----~nil~~~~~~~ki~dfgl~~~   97 (100)
                          +||+++..+.+||+|||+|..
T Consensus       207 DiKP~NIll~~~~~vkL~DFG~a~~  231 (391)
T PHA03212        207 DIKAENIFINHPGDVCLGDFGAACF  231 (391)
T ss_pred             CCChHhEEEcCCCCEEEEeCCcccc
Confidence                899999999999999999854

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.49  E-value=4.2e-13  Score=82.34  Aligned_cols=86  Identities=17%  Similarity=0.230  Sum_probs=74.9

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+..+++++|||++++++.+.  +..++++||++ ++|.+++......+++..+..++.|++            
T Consensus        50 ~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~ii  129 (266)
T cd05064          50 RRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYV  129 (266)
T ss_pred             HHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence            346889999999999999999999988  88999999999 999999877554588888888887765            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +|+++..++.+|++|||.+..
T Consensus       130 H~dikp~nili~~~~~~~l~dfg~~~~  156 (266)
T cd05064         130 HKGLAAHKVLVNSDLVCKISGFRRLQE  156 (266)
T ss_pred             eccccHhhEEEcCCCcEEECCCccccc
Confidence                  899999999999999997643

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.49  E-value=3.1e-13  Score=86.79  Aligned_cols=83  Identities=20%  Similarity=0.241  Sum_probs=72.6

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ..+.+|+.+++.++|||++++++.+.  ...++++||++ ++|..++....  ++...+..++.|++             
T Consensus        88 ~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~--~~~~~~~~~~~qil~aL~~LH~~~IvH  165 (370)
T cd05621          88 AFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD--VPEKWAKFYTAEVVLALDAIHSMGLIH  165 (370)
T ss_pred             HHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence            45778999999999999999999988  88999999999 99999987643  78888888877765             


Q ss_pred             -----hcccccCCCeEEEeecCCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~~   97 (100)
                           +||+++.++.+||+|||++..
T Consensus       166 rDLKp~NILl~~~~~~kL~DFG~a~~  191 (370)
T cd05621         166 RDVKPDNMLLDKHGHLKLADFGTCMK  191 (370)
T ss_pred             cCCCHHHEEECCCCCEEEEeccccee
Confidence                 899999999999999998753

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.49  E-value=1.5e-13  Score=91.38  Aligned_cols=80  Identities=25%  Similarity=0.358  Sum_probs=70.6

Q ss_pred             HHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------------
Q 034245           16 IREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------------   76 (100)
Q Consensus        16 ~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------------   76 (100)
                      .-+|+=|++++|+||+.+.|+|.  ...+++||||+ |.|...++... +.+...+..|..+++                
T Consensus       160 ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~~-~itp~llv~Wsk~IA~GM~YLH~hKIIHRDL  238 (904)
T KOG4721|consen  160 ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAGR-PITPSLLVDWSKGIAGGMNYLHLHKIIHRDL  238 (904)
T ss_pred             hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHHHhccC-ccCHHHHHHHHHHhhhhhHHHHHhhHhhhcc
Confidence            34777889999999999999999  77889999999 99999998865 488888888887776                


Q ss_pred             --hcccccCCCeEEEeecCCCC
Q 034245           77 --RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 --~nil~~~~~~~ki~dfgl~~   96 (100)
                        -||+++.+..+||+|||-+.
T Consensus       239 KSPNiLIs~~d~VKIsDFGTS~  260 (904)
T KOG4721|consen  239 KSPNILISYDDVVKISDFGTSK  260 (904)
T ss_pred             CCCceEeeccceEEeccccchH
Confidence              79999999999999999764

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.49  E-value=4.4e-13  Score=81.79  Aligned_cols=86  Identities=20%  Similarity=0.296  Sum_probs=74.5

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ....+.+|+.+++.++|||++++++.+. ...++++||++ ++|.+++.... .++...+..++.|++            
T Consensus        39 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~~i~  117 (257)
T cd05116          39 LKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELGPLNKFLQKNK-HVTEKNITELVHQVSMGMKYLEETNFV  117 (257)
T ss_pred             HHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence            4567889999999999999999999888 78899999999 99999987654 378888888888766            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +|+++..++.+|++|||++..
T Consensus       118 H~dlkp~nill~~~~~~kl~Dfg~~~~  144 (257)
T cd05116         118 HRDLAARNVLLVTQHYAKISDFGLSKA  144 (257)
T ss_pred             ecccchhhEEEcCCCeEEECCCccccc
Confidence                  899999999999999998754

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.49  E-value=3.4e-13  Score=83.12  Aligned_cols=87  Identities=22%  Similarity=0.306  Sum_probs=75.7

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ..+.+.+|+.+++.++|||++++.+.+.  ...++++||++ +++..++.....+++...+..++.|++           
T Consensus        45 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i  124 (280)
T cd06611          45 ELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKV  124 (280)
T ss_pred             HHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            3456889999999999999999999988  88999999999 899998876555588888888888865           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +|++++.++.++++|||++..
T Consensus       125 ~h~dl~p~nili~~~~~~~l~d~g~~~~  152 (280)
T cd06611         125 IHRDLKAGNILLTLDGDVKLADFGVSAK  152 (280)
T ss_pred             ccCCCChhhEEECCCCCEEEccCccchh
Confidence                   899999999999999998743

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.49  E-value=2.7e-13  Score=85.53  Aligned_cols=86  Identities=27%  Similarity=0.291  Sum_probs=75.1

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|+|++++.+.+.  ...++++||++ ++|.+++......+++..+..++.|++            
T Consensus        45 ~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~  124 (330)
T cd05601          45 VSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYV  124 (330)
T ss_pred             HHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence            445778999999999999999999888  88999999999 999999987644588888888887765            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +||+++.++.+||+|||++..
T Consensus       125 H~Dlkp~NIll~~~~~~kL~Dfg~a~~  151 (330)
T cd05601         125 HRDIKPENVLIDRTGHIKLADFGSAAR  151 (330)
T ss_pred             cccCchHheEECCCCCEEeccCCCCeE
Confidence                  899999999999999998853

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.48  E-value=4.9e-13  Score=83.41  Aligned_cols=85  Identities=31%  Similarity=0.461  Sum_probs=70.7

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC------------------CCCCHHHHHH
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK------------------DSMDGYSIKF   70 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~------------------~~~~~~~~~~   70 (100)
                      ...+.+|+.++.+++|||++++++.+.  +..++++||++ ++|.+++....                  ..+++..+..
T Consensus        63 ~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (304)
T cd05096          63 RNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLH  142 (304)
T ss_pred             HHHHHHHHHHHhhcCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHH
Confidence            356889999999999999999999988  88999999999 99998875431                  1245566667


Q ss_pred             HHHHhH------------------hcccccCCCeEEEeecCCCC
Q 034245           71 SSSDSL------------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        71 ~~~~~~------------------~nil~~~~~~~ki~dfgl~~   96 (100)
                      ++.|++                  +|++++.++.+|++|||++.
T Consensus       143 i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~  186 (304)
T cd05096         143 VALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSR  186 (304)
T ss_pred             HHHHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCccce
Confidence            777755                  89999999999999999875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.48  E-value=6.3e-13  Score=81.48  Aligned_cols=86  Identities=22%  Similarity=0.255  Sum_probs=74.5

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  +..++++||++ ++|.+++......++...+..++.|++            
T Consensus        49 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~  128 (267)
T cd05066          49 RRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYV  128 (267)
T ss_pred             HHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence            457889999999999999999999988  88999999999 899999877654578888887777755            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +|++++.++.++++|||++..
T Consensus       129 h~dlkp~nili~~~~~~~l~dfg~~~~  155 (267)
T cd05066         129 HRDLAARNILVNSNLVCKVSDFGLSRV  155 (267)
T ss_pred             ehhhchhcEEECCCCeEEeCCCCcccc
Confidence                  899999999999999998754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.48  E-value=4.3e-13  Score=84.81  Aligned_cols=85  Identities=20%  Similarity=0.253  Sum_probs=74.0

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.++..++|+|++++++.+.  +..|+++||++ ++|..++......++...+..++.|++            
T Consensus        45 ~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv  124 (331)
T cd05597          45 TACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYV  124 (331)
T ss_pred             HHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence            345778999999999999999999988  88999999999 999999876544588888888888866            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +||++..++.+|++|||++.
T Consensus       125 H~dlkp~Nill~~~~~~kl~Dfg~~~  150 (331)
T cd05597         125 HRDIKPDNVLLDKNGHIRLADFGSCL  150 (331)
T ss_pred             ECCCCHHHEEECCCCCEEEEECCcee
Confidence                  89999999999999999874

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.48  E-value=1.2e-14  Score=87.36  Aligned_cols=88  Identities=25%  Similarity=0.267  Sum_probs=74.9

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCC-CCCHHHHHHHHHHhH---------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKD-SMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~-~~~~~~~~~~~~~~~---------   76 (100)
                      +....+.||+++-+.++||||.++++.|-  ...|+++||.+ |++++.+...+. .+.......+..|++         
T Consensus        64 ~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k  143 (281)
T KOG0580|consen   64 QVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK  143 (281)
T ss_pred             cchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC
Confidence            34567899999999999999999999998  89999999999 999999984432 277777777777765         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               +|++++..+.+|++|||-+..
T Consensus       144 ~VIhRdiKpenlLlg~~~~lkiAdfGwsV~  173 (281)
T KOG0580|consen  144 RVIHRDIKPENLLLGSAGELKIADFGWSVH  173 (281)
T ss_pred             CcccCCCCHHHhccCCCCCeeccCCCceee
Confidence                     899999999999999997654

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.48  E-value=1.9e-13  Score=90.17  Aligned_cols=85  Identities=24%  Similarity=0.316  Sum_probs=75.2

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+++++.++|||||+++++.-  ..+|++.|.-+ |+++++|-.+..++.+...+.+++|++            
T Consensus        61 t~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVV  140 (864)
T KOG4717|consen   61 TGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVV  140 (864)
T ss_pred             hhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhh
Confidence            356889999999999999999999887  89999999999 999999999887899999998888876            


Q ss_pred             ------hccccc-CCCeEEEeecCCCC
Q 034245           77 ------RCCLLS-FGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~-~~~~~ki~dfgl~~   96 (100)
                            +|+++- .-|.+|+.|||++-
T Consensus       141 HRDLKPENVVFFEKlGlVKLTDFGFSN  167 (864)
T KOG4717|consen  141 HRDLKPENVVFFEKLGLVKLTDFGFSN  167 (864)
T ss_pred             cccCCcceeEEeeecCceEeeeccccc
Confidence                  677665 67999999999974

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.48  E-value=3e-13  Score=83.44  Aligned_cols=88  Identities=32%  Similarity=0.375  Sum_probs=75.3

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      .....+.+|+.+++.++|||++++++.+.  ...++++||+++++...+......+++..+..++.|++           
T Consensus        41 ~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i  120 (284)
T cd07839          41 GVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNV  120 (284)
T ss_pred             cCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            33456788999999999999999999988  88999999999888887765444589999888888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +|++++.++.+|++|||++..
T Consensus       121 ~H~dl~~~nil~~~~~~~~l~dfg~~~~  148 (284)
T cd07839         121 LHRDLKPQNLLINKNGELKLADFGLARA  148 (284)
T ss_pred             ecCCCCHHHEEEcCCCcEEECccchhhc
Confidence                   899999999999999998754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.48  E-value=5.3e-13  Score=84.16  Aligned_cols=84  Identities=18%  Similarity=0.334  Sum_probs=72.1

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++.+.+.  ...++++||++ ++|...+.... .+++..+..++.|++            
T Consensus        39 ~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~~~~i  117 (325)
T cd05594          39 VAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEKNV  117 (325)
T ss_pred             HHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhcCCE
Confidence            345678999999999999999999888  88999999999 99988886654 388888887777765            


Q ss_pred             -------hcccccCCCeEEEeecCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~   96 (100)
                             +||+++.++.+||+|||++.
T Consensus       118 vHrDikp~NIll~~~~~~kL~Dfg~~~  144 (325)
T cd05594         118 VYRDLKLENLMLDKDGHIKITDFGLCK  144 (325)
T ss_pred             EecCCCCCeEEECCCCCEEEecCCCCe
Confidence                   89999999999999999874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.47  E-value=4.8e-13  Score=84.54  Aligned_cols=84  Identities=18%  Similarity=0.267  Sum_probs=72.8

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+.+|..++..+ +|||++++++.+.  +..|+++||++ ++|...+.... .+++..+..++.|++           
T Consensus        39 ~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i  117 (329)
T cd05588          39 IDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQR-KLPEEHARFYSAEISLALNFLHERGI  117 (329)
T ss_pred             HHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            34577899999888 7999999999988  88999999999 99988886654 489999888888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~   96 (100)
                             +||+++.++.+||+|||++.
T Consensus       118 vH~dlkp~Nili~~~~~~kL~Dfg~~~  144 (329)
T cd05588         118 IYRDLKLDNVLLDAEGHIKLTDYGMCK  144 (329)
T ss_pred             EecCCCHHHeEECCCCCEEECcCcccc
Confidence                   89999999999999999875

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.47  E-value=7.6e-13  Score=80.50  Aligned_cols=89  Identities=18%  Similarity=0.175  Sum_probs=75.3

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccC-CCCCCHHHHHHHHHHhH--------
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYP-KDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~~~~--------   76 (100)
                      +.....+.+|+.+++.++|+|++++++.+.  ...++++||++ ++|.+.+... ...++...+..++.|++        
T Consensus        40 ~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~  119 (256)
T cd08221          40 EKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHK  119 (256)
T ss_pred             hhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            344567889999999999999999999998  88999999999 9999998765 23378888877777755        


Q ss_pred             ----------hcccccCCCeEEEeecCCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                +|+++..++.+|++|||++..
T Consensus       120 ~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~  150 (256)
T cd08221         120 AGILHRDIKTLNIFLTKAGLIKLGDFGISKI  150 (256)
T ss_pred             CCccccCCChHhEEEeCCCCEEECcCcceEE
Confidence                      899999999999999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.47  E-value=9.9e-13  Score=81.11  Aligned_cols=88  Identities=35%  Similarity=0.412  Sum_probs=74.3

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCC--CCCCHHHHHHHHHHhH--------
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPK--DSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~--~~~~~~~~~~~~~~~~--------   76 (100)
                      ......+.+|+.+++.++|||++++++.+.  ...++++||+.+++.+.+....  ..++...+..++.|++        
T Consensus        40 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~  119 (285)
T cd07861          40 EGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHS  119 (285)
T ss_pred             CCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHh
Confidence            334466889999999999999999999988  8899999999988887775432  3478888888888866        


Q ss_pred             ----------hcccccCCCeEEEeecCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~   96 (100)
                                +|++++.++.+|++|||++.
T Consensus       120 ~~i~H~dl~p~nil~~~~~~~~l~dfg~~~  149 (285)
T cd07861         120 RRVLHRDLKPQNLLIDNKGVIKLADFGLAR  149 (285)
T ss_pred             CCeeecCCCHHHEEEcCCCcEEECccccee
Confidence                      89999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.47  E-value=5.9e-14  Score=94.44  Aligned_cols=93  Identities=18%  Similarity=0.272  Sum_probs=82.1

Q ss_pred             cCCCCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----
Q 034245            5 HNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----   76 (100)
Q Consensus         5 ~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----   76 (100)
                      +...++..++++=||.+|..++||+++++++.|.  +.+|+..|||+ |.....+-..+.+++++++..+++|++     
T Consensus        66 etkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~  145 (1187)
T KOG0579|consen   66 ETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNW  145 (1187)
T ss_pred             cccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHH
Confidence            3445556788999999999999999999999887  99999999999 888888877777799999999999976     


Q ss_pred             -------------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                   -||++..+|.++++|||.+..
T Consensus       146 LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAK  179 (1187)
T KOG0579|consen  146 LHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAK  179 (1187)
T ss_pred             HhhcchhhhhccccceEEEecCcEeeeccccccc
Confidence                         699999999999999998754

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.47  E-value=9.5e-13  Score=82.35  Aligned_cols=86  Identities=30%  Similarity=0.366  Sum_probs=73.8

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  +..++++||+++++...+......++...+..++.|++             
T Consensus        48 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH  127 (309)
T cd07872          48 PCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLH  127 (309)
T ss_pred             chhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence            346788999999999999999999988  88999999999888888776554478888887777765             


Q ss_pred             -----hcccccCCCeEEEeecCCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~~   97 (100)
                           +|++++.++.+|++|||++..
T Consensus       128 ~dlkp~Nill~~~~~~kl~Dfg~~~~  153 (309)
T cd07872         128 RDLKPQNLLINERGELKLADFGLARA  153 (309)
T ss_pred             CCCCHHHEEECCCCCEEECcccccee
Confidence                 899999999999999998753

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.47  E-value=1e-12  Score=81.87  Aligned_cols=86  Identities=30%  Similarity=0.384  Sum_probs=74.3

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ...+.+|+..++.++|||++++++.+.  +..++++||+++++...+......++...+..++.|++             
T Consensus        48 ~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H  127 (301)
T cd07873          48 PCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLH  127 (301)
T ss_pred             hhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeC
Confidence            456788999999999999999999998  88999999999888888876554578888888877765             


Q ss_pred             -----hcccccCCCeEEEeecCCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~~   97 (100)
                           +||+++.++.+|++|||++..
T Consensus       128 ~dlkp~Nil~~~~~~~kl~dfg~~~~  153 (301)
T cd07873         128 RDLKPQNLLINERGELKLADFGLARA  153 (301)
T ss_pred             CCCCHHHEEECCCCcEEECcCcchhc
Confidence                 899999999999999998754

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.47  E-value=8.1e-14  Score=92.47  Aligned_cols=94  Identities=17%  Similarity=0.148  Sum_probs=82.9

Q ss_pred             cCCCCcchhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------
Q 034245            5 HNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------   76 (100)
Q Consensus         5 ~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------   76 (100)
                      +...++..+.|..|+.++++-+|.||+-+.|.|. ....+++.+|. .+|+.++...+.+|.-.....+++|++      
T Consensus       425 ~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YL  504 (678)
T KOG0193|consen  425 DDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYL  504 (678)
T ss_pred             CCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhh
Confidence            3444556788999999999999999999999999 77799999999 889999998777788888888888877      


Q ss_pred             ------------hcccccCCCeEEEeecCCCCCC
Q 034245           77 ------------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 ------------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                                  .||++..++.|||+|||++.+.
T Consensus       505 HAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk  538 (678)
T KOG0193|consen  505 HAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVK  538 (678)
T ss_pred             hhhhhhhhhccccceEEccCCcEEEecccceeee
Confidence                        8999999999999999999764

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.46  E-value=7.6e-13  Score=81.70  Aligned_cols=86  Identities=19%  Similarity=0.327  Sum_probs=73.8

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++|||++++.+.+.  +..++++||++ +++...+.....++++..+..++.|++           
T Consensus        45 ~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i  124 (282)
T cd06643          45 ELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKI  124 (282)
T ss_pred             HHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            3556889999999999999999999888  88999999999 888887765444588888888877765           


Q ss_pred             -------hcccccCCCeEEEeecCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~   96 (100)
                             +|++++.++.+|++|||++.
T Consensus       125 ~H~dlkp~nili~~~~~~kl~dfg~~~  151 (282)
T cd06643         125 IHRDLKAGNILFTLDGDIKLADFGVSA  151 (282)
T ss_pred             eecCCCcccEEEccCCCEEEccccccc
Confidence                   89999999999999999874

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.46  E-value=8.3e-13  Score=80.97  Aligned_cols=86  Identities=23%  Similarity=0.278  Sum_probs=70.9

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCC----CCHHHHHHHHHHhH--------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDS----MDGYSIKFSSSDSL--------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~----~~~~~~~~~~~~~~--------   76 (100)
                      ...+.+|+..++.++|||++++++.+.  ...++++||++ ++|.+++......    .++..+..++.|++        
T Consensus        39 ~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~  118 (269)
T cd05042          39 QLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ  118 (269)
T ss_pred             HHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh
Confidence            346789999999999999999999888  88999999999 9999998764321    34556666666654        


Q ss_pred             ----------hcccccCCCeEEEeecCCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                +|++++.++.+|++|||++..
T Consensus       119 ~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~  149 (269)
T cd05042         119 ADFIHSDLALRNCQLTADLSVKIGDYGLALE  149 (269)
T ss_pred             cCEecccccHhheEecCCCcEEEeccccccc
Confidence                      899999999999999998753

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.46  E-value=2.3e-13  Score=87.00  Aligned_cols=86  Identities=20%  Similarity=0.237  Sum_probs=75.2

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCC-CCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDS-MDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~-~~~~~~~~~~~~~~-----------   76 (100)
                      ..++..|.++|+.++||.+.+++..++  ...+++||||+ |+|......+... +++..+++++..++           
T Consensus       121 l~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGi  200 (459)
T KOG0610|consen  121 LKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGI  200 (459)
T ss_pred             HHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhce
Confidence            345677899999999999999999999  88999999999 9998887776543 89999999988855           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||++-.+|++-++||.|+..
T Consensus       201 vYRDLKPENILvredGHIMLsDFDLS~~  228 (459)
T KOG0610|consen  201 VYRDLKPENILVREDGHIMLSDFDLSLR  228 (459)
T ss_pred             eeccCCcceeEEecCCcEEeeecccccc
Confidence                   999999999999999998753

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.46  E-value=8e-13  Score=82.02  Aligned_cols=89  Identities=20%  Similarity=0.285  Sum_probs=75.4

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      ......+.+|+..++.++|||++++.+.+.  +..++++||++ +++...+......+++..+..+..|++         
T Consensus        50 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~  129 (292)
T cd06644          50 EEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSM  129 (292)
T ss_pred             HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence            334567889999999999999999999988  88999999999 888877765444588888888888866         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               +|++++.++.+|++|||++..
T Consensus       130 ~i~H~dlkp~Nili~~~~~~kl~dfg~~~~  159 (292)
T cd06644         130 KIIHRDLKAGNVLLTLDGDIKLADFGVSAK  159 (292)
T ss_pred             CeeecCCCcceEEEcCCCCEEEccCcccee
Confidence                     899999999999999998653

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.46  E-value=8.3e-13  Score=83.52  Aligned_cols=86  Identities=21%  Similarity=0.305  Sum_probs=69.8

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee---ccEEEEEeccc-ccHHHHhccCC--------------------------
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS---QGLCLFLEYQA-NDLAYLLKYPK--------------------------   60 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~---~~~~lv~e~~~-~~l~~~l~~~~--------------------------   60 (100)
                      ...+.+|+.++..+ +||||+++++.+.   ..+++++||++ |+|.+++....                          
T Consensus        54 ~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (338)
T cd05102          54 HKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRV  133 (338)
T ss_pred             HHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhcc
Confidence            45688999999999 8999999999887   56899999999 99998886431                          


Q ss_pred             -----------------------------------CCCCHHHHHHHHHHhH------------------hcccccCCCeE
Q 034245           61 -----------------------------------DSMDGYSIKFSSSDSL------------------RCCLLSFGKTV   87 (100)
Q Consensus        61 -----------------------------------~~~~~~~~~~~~~~~~------------------~nil~~~~~~~   87 (100)
                                                         .+++...+..++.|++                  +|++++.++.+
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~  213 (338)
T cd05102         134 DRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVV  213 (338)
T ss_pred             ccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcE
Confidence                                               1245556666666655                  89999999999


Q ss_pred             EEeecCCCCC
Q 034245           88 KVADLQALDW   97 (100)
Q Consensus        88 ki~dfgl~~~   97 (100)
                      |++|||++..
T Consensus       214 kl~DfG~a~~  223 (338)
T cd05102         214 KICDFGLARD  223 (338)
T ss_pred             EEeecccccc
Confidence            9999998853

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.45  E-value=1.3e-12  Score=81.09  Aligned_cols=86  Identities=19%  Similarity=0.263  Sum_probs=75.0

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+++++.++|||++++.+.+.  ...++++||++ ++|.+.+.... .++...+..++.|++           
T Consensus        44 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qil~~l~~lH~~~i  122 (290)
T cd05580          44 QVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSG-RFPEPVARFYAAQVVLALEYLHSLDI  122 (290)
T ss_pred             HHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            3456888999999999999999999988  88999999998 99999987664 388888888877766           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +|++++.++.+|++|||++..
T Consensus       123 ~H~dl~p~nili~~~~~~kl~dfg~~~~  150 (290)
T cd05580         123 VYRDLKPENLLLDSDGYIKITDFGFAKR  150 (290)
T ss_pred             ecCCCCHHHEEECCCCCEEEeeCCCccc
Confidence                   899999999999999998864

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.45  E-value=8.7e-13  Score=82.61  Aligned_cols=85  Identities=20%  Similarity=0.213  Sum_probs=73.3

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  +..++++||++ ++|..++.... .++...+..++.|++            
T Consensus        43 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~~i  121 (308)
T cd06615          43 RNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-RIPENILGKISIAVLRGLTYLREKHKI  121 (308)
T ss_pred             HHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhhCCE
Confidence            456889999999999999999999988  89999999999 89999987654 378888777777754            


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +|++++.++.+|++|||++..
T Consensus       122 ~H~dl~p~nil~~~~~~~~l~dfg~~~~  149 (308)
T cd06615         122 MHRDVKPSNILVNSRGEIKLCDFGVSGQ  149 (308)
T ss_pred             EECCCChHHEEEecCCcEEEccCCCccc
Confidence                   788999999999999998753

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.45  E-value=1.1e-12  Score=83.04  Aligned_cols=84  Identities=19%  Similarity=0.278  Sum_probs=71.7

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+.+|+.++..+ +|||++++++.+.  +..++++||++ ++|...+.... .+++..+..++.|++           
T Consensus        39 ~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~~l~~lH~~~i  117 (329)
T cd05618          39 IDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHERGI  117 (329)
T ss_pred             HHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            34577888888776 8999999999988  88999999999 99988876654 388888888887765           


Q ss_pred             -------hcccccCCCeEEEeecCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~   96 (100)
                             +|++++.++.+||+|||++.
T Consensus       118 vH~Dikp~Nili~~~~~~kL~DfG~~~  144 (329)
T cd05618         118 IYRDLKLDNVLLDSEGHIKLTDYGMCK  144 (329)
T ss_pred             eeCCCCHHHEEECCCCCEEEeeCCccc
Confidence                   89999999999999999875

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.45  E-value=1.5e-12  Score=80.33  Aligned_cols=86  Identities=16%  Similarity=0.247  Sum_probs=76.0

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ...+.+|+..++.++|||++++++.+. ...++++||++ +++.+.+......+++..+..++.|++             
T Consensus        53 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H  132 (279)
T cd05057          53 NKEILDEAYVMASVDHPHVVRLLGICLSSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVH  132 (279)
T ss_pred             HHHHHHHHHHHHhCCCCCcceEEEEEecCceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEe
Confidence            456889999999999999999999998 88999999999 999999987655588888888888866             


Q ss_pred             -----hcccccCCCeEEEeecCCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~~   97 (100)
                           +|+++..++.+|++|||++..
T Consensus       133 ~di~p~nil~~~~~~~kL~dfg~~~~  158 (279)
T cd05057         133 RDLAARNVLVKTPQHVKITDFGLAKL  158 (279)
T ss_pred             cccCcceEEEcCCCeEEECCCccccc
Confidence                 899999999999999998854

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.45  E-value=1.1e-12  Score=80.42  Aligned_cols=87  Identities=21%  Similarity=0.263  Sum_probs=75.1

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+..++.++|||++++.+.+.  ...++++||++ ++|..++......++...+..++.|++           
T Consensus        48 ~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~  127 (269)
T cd05065          48 QRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNY  127 (269)
T ss_pred             HHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            4567889999999999999999999888  77899999999 899999876554578888888877765           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +|++++.++.+|++|||++..
T Consensus       128 ~H~dl~p~nili~~~~~~kl~dfg~~~~  155 (269)
T cd05065         128 VHRDLAARNILVNSNLVCKVSDFGLSRF  155 (269)
T ss_pred             eecccChheEEEcCCCcEEECCCccccc
Confidence                   899999999999999998753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.45  E-value=1.3e-12  Score=79.56  Aligned_cols=87  Identities=22%  Similarity=0.240  Sum_probs=75.1

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+..+++++|||++++++.+. ...++++|+++ ++|.+.+.... ..+++..+..++.|++           
T Consensus        39 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i  118 (257)
T cd05040          39 IMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRF  118 (257)
T ss_pred             HHHHHHHHHHHHhhcCCCCccceeEEEcCCeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCc
Confidence            3457889999999999999999999988 88999999999 99999987654 3478888888777765           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +|++++.++.+|++|||++..
T Consensus       119 ~H~di~p~nil~~~~~~~kl~dfg~~~~  146 (257)
T cd05040         119 IHRDLAARNILLASDDKVKIGDFGLMRA  146 (257)
T ss_pred             cccccCcccEEEecCCEEEecccccccc
Confidence                   899999999999999998753

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.45  E-value=1e-12  Score=86.68  Aligned_cols=85  Identities=21%  Similarity=0.229  Sum_probs=74.0

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH--------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL--------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~--------------   76 (100)
                      ..+.+|+.+++.++|+||+++++.+.  +..++++|++.+++...+......+++..+..++.|++              
T Consensus       205 ~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHr  284 (461)
T PHA03211        205 ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHR  284 (461)
T ss_pred             cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEC
Confidence            35678999999999999999999887  78899999998888888866544589999988888876              


Q ss_pred             ----hcccccCCCeEEEeecCCCCC
Q 034245           77 ----RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----~nil~~~~~~~ki~dfgl~~~   97 (100)
                          +||+++.++.+||+|||++..
T Consensus       285 DLKP~NILl~~~~~vkL~DFGla~~  309 (461)
T PHA03211        285 DIKTENVLVNGPEDICLGDFGAACF  309 (461)
T ss_pred             cCCHHHEEECCCCCEEEcccCCcee
Confidence                899999999999999999853

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.45  E-value=1.7e-12  Score=80.42  Aligned_cols=85  Identities=26%  Similarity=0.305  Sum_probs=73.6

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH--------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL--------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~--------------   76 (100)
                      ..+.+|+.+++.++|+|++++++++.  ...++++||++++|.+.+......++...+..++.|++              
T Consensus        48 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~  127 (291)
T cd07844          48 FTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHR  127 (291)
T ss_pred             hhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence            45778999999999999999999988  88999999999889888876554578888888877765              


Q ss_pred             ----hcccccCCCeEEEeecCCCCC
Q 034245           77 ----RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----~nil~~~~~~~ki~dfgl~~~   97 (100)
                          +|++++.++.+|++|||++..
T Consensus       128 dl~p~nil~~~~~~~kl~dfg~~~~  152 (291)
T cd07844         128 DLKPQNLLISERGELKLADFGLARA  152 (291)
T ss_pred             cCCHHHEEEcCCCCEEECccccccc
Confidence                899999999999999998753

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.45  E-value=1e-12  Score=81.18  Aligned_cols=85  Identities=21%  Similarity=0.271  Sum_probs=73.6

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH--------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL--------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~--------------   76 (100)
                      ..+..|+..++.++|||++++++.+. ...++++|+++ ++|.+++......+++..+..++.|++              
T Consensus        54 ~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~  133 (279)
T cd05111          54 QEITDHMLAMGSLDHAYIVRLLGICPGASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHR  133 (279)
T ss_pred             HHHHHHHHHHhcCCCCCcceEEEEECCCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecc
Confidence            45677888889999999999999887 77889999999 999999977655588888888888866              


Q ss_pred             ----hcccccCCCeEEEeecCCCCC
Q 034245           77 ----RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----~nil~~~~~~~ki~dfgl~~~   97 (100)
                          +|++++.++.+|++|||++..
T Consensus       134 dlkp~nili~~~~~~kl~Dfg~~~~  158 (279)
T cd05111         134 NLAARNILLKSDSIVQIADFGVADL  158 (279)
T ss_pred             ccCcceEEEcCCCcEEEcCCcccee
Confidence                899999999999999998853

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.45  E-value=1e-12  Score=83.13  Aligned_cols=84  Identities=20%  Similarity=0.254  Sum_probs=72.9

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ..+.+|+.++..++|++++++++.+.  +..|+++||++ |+|..++......++...+..++.|++             
T Consensus        46 ~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiH  125 (331)
T cd05624          46 ACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVH  125 (331)
T ss_pred             HHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence            34677889999999999999999988  88999999999 999999976544588888888877765             


Q ss_pred             -----hcccccCCCeEEEeecCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~   96 (100)
                           +|++++.++.+|++|||++.
T Consensus       126 rDlkp~Nill~~~~~~kl~DfG~a~  150 (331)
T cd05624         126 RDIKPDNVLLDMNGHIRLADFGSCL  150 (331)
T ss_pred             ccCchHHEEEcCCCCEEEEecccee
Confidence                 89999999999999999874

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.45  E-value=1.2e-12  Score=80.10  Aligned_cols=86  Identities=23%  Similarity=0.256  Sum_probs=74.9

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.++++++|||++++.+.+.  ...++++||++ ++|.+++......+++..+..++.|++            
T Consensus        49 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~  128 (266)
T cd05033          49 RLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYV  128 (266)
T ss_pred             HHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            456889999999999999999999888  88999999999 899999877554588888888877765            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +|++++.++.++++|||++..
T Consensus       129 H~di~p~nili~~~~~~~l~dfg~~~~  155 (266)
T cd05033         129 HRDLAARNILVNSNLVCKVSDFGLSRR  155 (266)
T ss_pred             cCCCCcceEEEcCCCCEEECccchhhc
Confidence                  899999999999999998764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.45  E-value=1.2e-12  Score=79.60  Aligned_cols=86  Identities=15%  Similarity=0.096  Sum_probs=74.5

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+. ...++++||++ ++|..++......++...+..++.|++             
T Consensus        45 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H  124 (259)
T cd05037          45 SLAFFETASLMSQLSHKHLVKLYGVCVRDENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVH  124 (259)
T ss_pred             HHHHHHHHHHHHcCCCcchhheeeEEecCCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeec
Confidence            467889999999999999999999988 77899999999 999999887654588888888888865             


Q ss_pred             -----hcccccCCC-------eEEEeecCCCCC
Q 034245           77 -----RCCLLSFGK-------TVKVADLQALDW   97 (100)
Q Consensus        77 -----~nil~~~~~-------~~ki~dfgl~~~   97 (100)
                           +|++++.++       .+|++|||++..
T Consensus       125 ~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~  157 (259)
T cd05037         125 GNVCGKNILVARYGLNEGYVPFIKLSDPGIPIT  157 (259)
T ss_pred             ccCccceEEEecCccccCCceeEEeCCCCcccc
Confidence                 899998777       799999998764

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.45  E-value=1.1e-12  Score=84.25  Aligned_cols=83  Identities=19%  Similarity=0.233  Sum_probs=71.4

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ..+.+|+.+++.++|||++++++.+.  ...++++||++ |+|..++....  ++...+..++.|++             
T Consensus        88 ~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~--l~~~~~~~~~~qi~~aL~~LH~~~ivH  165 (370)
T cd05596          88 AFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNYD--IPEKWARFYTAEVVLALDAIHSMGFIH  165 (370)
T ss_pred             HHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence            44678999999999999999999888  78999999999 99999887643  77777777777755             


Q ss_pred             -----hcccccCCCeEEEeecCCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~~   97 (100)
                           +|++++.++.+||+|||++..
T Consensus       166 rDLkp~NILl~~~~~~kL~DfG~~~~  191 (370)
T cd05596         166 RDVKPDNMLLDKSGHLKLADFGTCMK  191 (370)
T ss_pred             cCCCHHHEEEcCCCCEEEEeccceee
Confidence                 899999999999999998753

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.44  E-value=3.8e-14  Score=89.08  Aligned_cols=84  Identities=26%  Similarity=0.359  Sum_probs=68.8

Q ss_pred             HHHHHHHHhhCCCCcceeeeeeee----c---cEEEEEecccccHHHHhccC---CCCCCHHHHHHHHHHhH--------
Q 034245           15 MIREVSCLMELNHPNIIRLMLVVS----Q---GLCLFLEYQANDLAYLLKYP---KDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus        15 ~~~e~~~l~~l~h~~iv~l~~~~~----~---~~~lv~e~~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~--------   76 (100)
                      -.||+.++++++|||||++.-.|.    .   ...+|+||+|.+|.+.++..   ...++.-.++.+..|+.        
T Consensus        64 knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~  143 (364)
T KOG0658|consen   64 KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS  143 (364)
T ss_pred             CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh
Confidence            458999999999999999988877    3   45699999999999999842   23377777777777765        


Q ss_pred             ----------hcccccCC-CeEEEeecCCCCCC
Q 034245           77 ----------RCCLLSFG-KTVKVADLQALDWP   98 (100)
Q Consensus        77 ----------~nil~~~~-~~~ki~dfgl~~~~   98 (100)
                                .|++++.+ |.+||+|||-|.+.
T Consensus       144 ~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L  176 (364)
T KOG0658|consen  144 HGICHRDIKPQNLLVDPDTGVLKICDFGSAKVL  176 (364)
T ss_pred             cCcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence                      89999955 99999999998753

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.44  E-value=1.6e-12  Score=79.22  Aligned_cols=86  Identities=26%  Similarity=0.321  Sum_probs=75.1

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+. ...++++||++ ++|.+++.... .+++..+..++.|++             
T Consensus        40 ~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~~~i~H  118 (257)
T cd05060          40 KKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLGPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLESKHFVH  118 (257)
T ss_pred             HHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCeec
Confidence            356889999999999999999999888 88899999999 99999997765 488888888888866             


Q ss_pred             -----hcccccCCCeEEEeecCCCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~~~   98 (100)
                           +|++++.++.+|++|||++...
T Consensus       119 ~di~p~nili~~~~~~kl~df~~~~~~  145 (257)
T cd05060         119 RDLAARNVLLVNRHQAKISDFGMSRAL  145 (257)
T ss_pred             cCcccceEEEcCCCcEEecccccccee
Confidence                 8999999999999999987643

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.44  E-value=1.7e-12  Score=78.73  Aligned_cols=85  Identities=24%  Similarity=0.398  Sum_probs=73.0

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ..+.+|+..+++++|||++++.+.+.  +..++++||++ +++...+......+++..+..+..|++             
T Consensus        37 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H  116 (250)
T cd05085          37 IKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIH  116 (250)
T ss_pred             HHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence            46889999999999999999999988  88999999999 999998876544478888777777754             


Q ss_pred             -----hcccccCCCeEEEeecCCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~~   97 (100)
                           +|++++.++.+|++|||++..
T Consensus       117 ~dl~p~nili~~~~~~~l~d~g~~~~  142 (250)
T cd05085         117 RDLAARNCLVGENNVLKISDFGMSRQ  142 (250)
T ss_pred             cccChheEEEcCCCeEEECCCcccee
Confidence                 899999999999999998753

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.44  E-value=1.4e-12  Score=82.35  Aligned_cols=85  Identities=18%  Similarity=0.227  Sum_probs=72.9

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+.+|+.+++.+ +|++++++++.+.  +..++++||++ ++|...+..... +++..+..++.|++           
T Consensus        48 ~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~i  126 (332)
T cd05614          48 VEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDN-FSEDEVRFYSGEIILALEHLHKLGI  126 (332)
T ss_pred             HHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            34577899999999 5999999998888  88899999999 999998876543 88888888887766           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+||+|||++..
T Consensus       127 vHrDlkp~Nili~~~~~~kl~DfG~~~~  154 (332)
T cd05614         127 VYRDIKLENILLDSEGHVVLTDFGLSKE  154 (332)
T ss_pred             EecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence                   899999999999999998853

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.44  E-value=1.7e-12  Score=80.30  Aligned_cols=87  Identities=20%  Similarity=0.245  Sum_probs=74.0

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      ....+.+|+.+++.++|||++++.+.+.    ...++++||++ ++|.+++......+++..+..++.|++         
T Consensus        49 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~  128 (284)
T cd05079          49 HIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSR  128 (284)
T ss_pred             HHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3457889999999999999999999887    45889999999 999999866544478888888877765         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               +|++++.++.++++|||++..
T Consensus       129 gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~  158 (284)
T cd05079         129 QYVHRDLAARNVLVESEHQVKIGDFGLTKA  158 (284)
T ss_pred             CeeecccchheEEEcCCCCEEECCCccccc
Confidence                     899999999999999998754

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.44  E-value=1.6e-12  Score=79.14  Aligned_cols=87  Identities=23%  Similarity=0.313  Sum_probs=75.4

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++|||++++++.+.  ...++++||++ +++...+.....+++...+..++.|++           
T Consensus        43 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i  122 (262)
T cd06613          43 DFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGK  122 (262)
T ss_pred             hHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            4567889999999999999999999888  88999999999 899988876644588888888877765           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +|++++.++.+|++|||++..
T Consensus       123 ~h~dl~p~ni~i~~~~~~~l~d~g~~~~  150 (262)
T cd06613         123 IHRDIKGANILLTEDGDVKLADFGVSAQ  150 (262)
T ss_pred             eecCCChhhEEECCCCCEEECccccchh
Confidence                   899999999999999998753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.44  E-value=1.8e-12  Score=79.45  Aligned_cols=86  Identities=23%  Similarity=0.261  Sum_probs=74.4

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.++++++|||++++.+.+.  ...++++||++ ++|..++......+++..+..++.|++            
T Consensus        50 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~  129 (268)
T cd05063          50 RQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYV  129 (268)
T ss_pred             HHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            456888999999999999999999988  88999999999 999999876544578888888877755            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +|++++.++.+|++|||++..
T Consensus       130 H~dlkp~Nili~~~~~~kl~dfg~~~~  156 (268)
T cd05063         130 HRDLAARNILVNSNLECKVSDFGLSRV  156 (268)
T ss_pred             ccccchhhEEEcCCCcEEECCCcccee
Confidence                  899999999999999998753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.44  E-value=1.1e-12  Score=80.54  Aligned_cols=86  Identities=24%  Similarity=0.348  Sum_probs=74.6

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ..+.+.+|+.+++.++|||++++++.+. ...++++||++ ++|.+++......++...+..++.|++            
T Consensus        50 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~  129 (270)
T cd05056          50 VREKFLQEAYIMRQFDHPHIVKLIGVITENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFV  129 (270)
T ss_pred             HHHHHHHHHHHHHhCCCCchhceeEEEcCCCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            3457889999999999999999999988 88899999999 999999976544478888887777765            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +|++++..+.+|++|||++.
T Consensus       130 H~dl~p~nili~~~~~~~l~d~g~~~  155 (270)
T cd05056         130 HRDIAARNVLVSSPDCVKLGDFGLSR  155 (270)
T ss_pred             ccccChheEEEecCCCeEEccCceee
Confidence                  89999999999999999875

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.44  E-value=2.8e-13  Score=90.77  Aligned_cols=86  Identities=21%  Similarity=0.288  Sum_probs=70.7

Q ss_pred             CcchhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH--------
Q 034245            9 EEVPSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~--------   76 (100)
                      ....+....|.+++... +||.+++++..|.  .++|++|||+. |++.......  .++++.+++++..+.        
T Consensus       409 ~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~~~~~--~F~e~rarfyaAev~l~L~fLH~  486 (694)
T KOG0694|consen  409 RDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVAGGDLMHHIHTD--VFSEPRARFYAAEVVLGLQFLHE  486 (694)
T ss_pred             cccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEecCCCcEEEEEecc--cccHHHHHHHHHHHHHHHHHHHh
Confidence            33456778888888777 6999999999999  99999999999 8844444332  389999988876644        


Q ss_pred             ----------hcccccCCCeEEEeecCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~   96 (100)
                                +|++++.+|.+||+|||++.
T Consensus       487 ~~IIYRDlKLdNiLLD~eGh~kiADFGlcK  516 (694)
T KOG0694|consen  487 NGIIYRDLKLDNLLLDTEGHVKIADFGLCK  516 (694)
T ss_pred             cCceeeecchhheEEcccCcEEeccccccc
Confidence                      99999999999999999974

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.43  E-value=2.1e-12  Score=79.06  Aligned_cols=87  Identities=21%  Similarity=0.390  Sum_probs=74.1

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~----------   76 (100)
                      ....+.+|+.+++.++|||++++++.+.  +..++++||++ ++|.+.+.... ..+++..+..++.|++          
T Consensus        45 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~  124 (263)
T cd05052          45 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN  124 (263)
T ss_pred             HHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3456889999999999999999999888  88899999999 99999886543 2378888777777765          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +|++++.++.+|++|||++..
T Consensus       125 i~H~dlkp~nil~~~~~~~kl~df~~~~~  153 (263)
T cd05052         125 FIHRDLAARNCLVGENHLVKVADFGLSRL  153 (263)
T ss_pred             EeecccCcceEEEcCCCcEEeCCCccccc
Confidence                    899999999999999998754

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.43  E-value=1.4e-12  Score=83.86  Aligned_cols=83  Identities=19%  Similarity=0.252  Sum_probs=71.4

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ..+.+|+.+++.++|||++++++.+.  ...++++||++ ++|..++....  ++...+..++.|++             
T Consensus        88 ~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~~~--~~~~~~~~~~~qi~~aL~~LH~~~ivH  165 (371)
T cd05622          88 AFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD--VPEKWARFYTAEVVLALDAIHSMGFIH  165 (371)
T ss_pred             HHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence            44678999999999999999999988  88999999999 99999887643  77777777777765             


Q ss_pred             -----hcccccCCCeEEEeecCCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~~   97 (100)
                           +||+++.++.+||+|||++..
T Consensus       166 rDLkp~NIll~~~~~ikL~DfG~a~~  191 (371)
T cd05622         166 RDVKPDNMLLDKSGHLKLADFGTCMK  191 (371)
T ss_pred             CCCCHHHEEECCCCCEEEEeCCceeE
Confidence                 899999999999999998753

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.43  E-value=1.8e-12  Score=83.67  Aligned_cols=86  Identities=21%  Similarity=0.218  Sum_probs=75.7

Q ss_pred             chhhHHHHHHHHhhCC-CCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           11 VPSSMIREVSCLMELN-HPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~-h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      ....+.+|+.+++.+. |||++++.+.|+  ..+++++|++. |+|++.+... . +++..+..+++|++          
T Consensus        78 ~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~-~-~sE~da~~~~~~il~av~~lH~~g  155 (382)
T KOG0032|consen   78 DREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK-H-YSERDAAGIIRQILEAVKYLHSLG  155 (382)
T ss_pred             cHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc-c-CCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3467899999999998 999999999999  88999999999 9999999876 3 89999999988876          


Q ss_pred             --------hcccccCC----CeEEEeecCCCCCC
Q 034245           77 --------RCCLLSFG----KTVKVADLQALDWP   98 (100)
Q Consensus        77 --------~nil~~~~----~~~ki~dfgl~~~~   98 (100)
                              +|+++...    +.+|++|||++...
T Consensus       156 vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~  189 (382)
T KOG0032|consen  156 VVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFI  189 (382)
T ss_pred             ceeccCCHHHeeeccccCCCCcEEEeeCCCceEc
Confidence                    89988643    47999999999754

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.43  E-value=1.8e-12  Score=79.32  Aligned_cols=84  Identities=19%  Similarity=0.263  Sum_probs=73.2

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++.+.+.  ...++++||++ ++|.+.+.... .++...+..++.|++            
T Consensus        50 ~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~  128 (267)
T cd06645          50 FAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTG-PLSESQIAYVSRETLQGLYYLHSKGKM  128 (267)
T ss_pred             HHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            345788999999999999999999988  88999999999 89999887654 388888888877765            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +|+++..++.++++|||++.
T Consensus       129 H~dlkp~nili~~~~~~~l~dfg~~~  154 (267)
T cd06645         129 HRDIKGANILLTDNGHVKLADFGVSA  154 (267)
T ss_pred             cCCCCHHHEEECCCCCEEECcceeee
Confidence                  89999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.43  E-value=2.1e-12  Score=78.86  Aligned_cols=86  Identities=20%  Similarity=0.259  Sum_probs=74.0

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~-----------   76 (100)
                      .+.+.+|+.++++++|||++++++.+.  +..++++|+++ ++|.+++.... ..++...+..++.|++           
T Consensus        45 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  124 (261)
T cd05068          45 PKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNY  124 (261)
T ss_pred             HHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            467889999999999999999999888  88899999998 99999987644 3378888888877765           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +|++++.++.+|++|||++..
T Consensus       125 ~H~dl~p~Nil~~~~~~~~l~dfg~~~~  152 (261)
T cd05068         125 IHRDLAARNVLVGENNICKVADFGLARV  152 (261)
T ss_pred             eeccCCcceEEEcCCCCEEECCcceEEE
Confidence                   899999999999999998753

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.43  E-value=2.3e-12  Score=78.87  Aligned_cols=84  Identities=21%  Similarity=0.267  Sum_probs=72.6

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.++++++|||++++++.+.  ...++++||++ ++|...+.... +++...+..++.|++            
T Consensus        50 ~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~  128 (267)
T cd06646          50 FSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTG-PLSELQIAYVCRETLQGLAYLHSKGKM  128 (267)
T ss_pred             HHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            345778999999999999999999988  88999999999 89998886544 478888888877765            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +|++++.++.+|++|||++.
T Consensus       129 H~dl~p~nill~~~~~~~l~dfg~~~  154 (267)
T cd06646         129 HRDIKGANILLTDNGDVKLADFGVAA  154 (267)
T ss_pred             ccCCCHHHEEECCCCCEEECcCccce
Confidence                  89999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.43  E-value=1.2e-12  Score=82.98  Aligned_cols=86  Identities=21%  Similarity=0.273  Sum_probs=75.4

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.++..++|||++++++.+.  +..++++||++ ++|...+.... .++...+..++.|++           
T Consensus        44 ~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~gi  122 (350)
T cd05573          44 QIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKD-VFPEETARFYIAELVLALDSVHKLGF  122 (350)
T ss_pred             HHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            3456888999999999999999999888  88999999999 99999987763 488888888888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+|++|||++..
T Consensus       123 iH~Dlkp~NIll~~~~~~kL~Dfg~~~~  150 (350)
T cd05573         123 IHRDIKPDNILIDADGHIKLADFGLCKK  150 (350)
T ss_pred             eccCCCHHHeEECCCCCEEeecCCCCcc
Confidence                   899999999999999998864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.43  E-value=1.6e-12  Score=82.26  Aligned_cols=84  Identities=19%  Similarity=0.269  Sum_probs=72.9

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ..+.+|+.++..++|++++.+.+.+.  ...++++||++ |+|.+++......++...+..++.|++             
T Consensus        46 ~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiH  125 (332)
T cd05623          46 ACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVH  125 (332)
T ss_pred             HHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence            34778889999999999999999888  88999999999 999999977544588888888877765             


Q ss_pred             -----hcccccCCCeEEEeecCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~   96 (100)
                           +|++++.++.+|++|||++.
T Consensus       126 rDlkp~Nili~~~~~~kL~DfG~a~  150 (332)
T cd05623         126 RDIKPDNILMDMNGHIRLADFGSCL  150 (332)
T ss_pred             cCCCHHHEEECCCCCEEEeecchhe
Confidence                 89999999999999999874

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.42  E-value=2.3e-12  Score=79.99  Aligned_cols=86  Identities=23%  Similarity=0.315  Sum_probs=73.2

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC---------------CCCCHHHHHHHHH
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK---------------DSMDGYSIKFSSS   73 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~---------------~~~~~~~~~~~~~   73 (100)
                      ...+.+|+..+++++|+|++++.+.+.  ...++++||++ ++|.+++....               ..+++..+..++.
T Consensus        51 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  130 (291)
T cd05094          51 RKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS  130 (291)
T ss_pred             HHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHH
Confidence            356889999999999999999999988  88999999999 99999986532               1267777787877


Q ss_pred             HhH------------------hcccccCCCeEEEeecCCCCC
Q 034245           74 DSL------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        74 ~~~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      |++                  +||+++.++.++++|||++..
T Consensus       131 ~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~  172 (291)
T cd05094         131 QIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRD  172 (291)
T ss_pred             HHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCcccc
Confidence            765                  899999999999999998853

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.42  E-value=1.9e-12  Score=80.28  Aligned_cols=87  Identities=22%  Similarity=0.303  Sum_probs=74.2

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC------------CCCCHHHHHHHHHHh
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK------------DSMDGYSIKFSSSDS   75 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~------------~~~~~~~~~~~~~~~   75 (100)
                      ....+.+|+.++++++|||++++++.+.  +..++++||++ ++|.+++....            ..+++..+..++.|+
T Consensus        50 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql  129 (288)
T cd05093          50 ARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQI  129 (288)
T ss_pred             HHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHH
Confidence            3456889999999999999999999988  88999999999 99999886432            137888888888776


Q ss_pred             H------------------hcccccCCCeEEEeecCCCCC
Q 034245           76 L------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        76 ~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      +                  +|++++.++.+|++|||++..
T Consensus       130 ~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~  169 (288)
T cd05093         130 AAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRD  169 (288)
T ss_pred             HHHHHHHHhCCeeecccCcceEEEccCCcEEeccCCcccc
Confidence            5                  899999999999999998753

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.42  E-value=1.8e-12  Score=78.78  Aligned_cols=89  Identities=24%  Similarity=0.216  Sum_probs=74.7

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccC-CCCCCHHHHHHHHHHhH--------
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYP-KDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~~~~--------   76 (100)
                      ......+.+|+..++.++|||++++++.+.  +..++++||++ ++|.+++... ...++...+..++.|++        
T Consensus        40 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~  119 (256)
T cd08529          40 RREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHS  119 (256)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            344567889999999999999999999988  88999999999 9999988764 23477777777776655        


Q ss_pred             ----------hcccccCCCeEEEeecCCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                +||+++.++.++++|||++..
T Consensus       120 ~~i~h~dl~~~nili~~~~~~~l~df~~~~~  150 (256)
T cd08529         120 KKILHRDIKSLNLFLDAYDNVKIGDLGVAKL  150 (256)
T ss_pred             CCcccCCCCcceEEEeCCCCEEEccccccee
Confidence                      899999999999999998653

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.42  E-value=1.9e-12  Score=81.44  Aligned_cols=84  Identities=19%  Similarity=0.287  Sum_probs=69.4

Q ss_pred             hhHHHHHH-HHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           13 SSMIREVS-CLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        13 ~~~~~e~~-~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ..+.+|.. +++.++|||++++.+.+.  +..++++||++ ++|...+.... .++...+..++.|++            
T Consensus        40 ~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~lH~~~iv  118 (321)
T cd05603          40 NHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRER-CFLEPRARFYAAEVASAIGYLHSLNII  118 (321)
T ss_pred             HHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence            34555654 578899999999999888  88999999999 89988876544 378888888877765            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +||+++.++.+||+|||++..
T Consensus       119 H~Dlkp~NIll~~~~~~kl~Dfg~~~~  145 (321)
T cd05603         119 YRDLKPENILLDSQGHVVLTDFGLCKE  145 (321)
T ss_pred             eccCCHHHeEECCCCCEEEccCCCCcc
Confidence                  899999999999999998753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.42  E-value=1.4e-12  Score=88.47  Aligned_cols=88  Identities=25%  Similarity=0.377  Sum_probs=77.7

Q ss_pred             cchhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC---------------CCCCHHHHHH
Q 034245           10 EVPSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK---------------DSMDGYSIKF   70 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~---------------~~~~~~~~~~   70 (100)
                      .+...+.+|+.+++.+ +|+|++.+.+.|.  +.++++.||+. |+|..+++..+               ..++..++..
T Consensus       343 ~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLls  422 (609)
T KOG0200|consen  343 SEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLS  422 (609)
T ss_pred             HHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHH
Confidence            4567899999999998 6999999999998  88999999999 99999998776               2377778888


Q ss_pred             HHHHhH------------------hcccccCCCeEEEeecCCCCC
Q 034245           71 SSSDSL------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        71 ~~~~~~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      +..|++                  ||+++..+..+||+|||+|..
T Consensus       423 fa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~  467 (609)
T KOG0200|consen  423 FAYQIANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARD  467 (609)
T ss_pred             HHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEccccceec
Confidence            888876                  999999999999999999973

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.42  E-value=3.3e-12  Score=79.01  Aligned_cols=84  Identities=19%  Similarity=0.271  Sum_probs=70.9

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhcc---CCCCCCHHHHHHHHHHhH----------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKY---PKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~---~~~~~~~~~~~~~~~~~~----------   76 (100)
                      ..+.+|+.+++.++|+|++++.+.+.  ...++++||++ ++|...+..   ....+++..+..++.|++          
T Consensus        38 ~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~  117 (280)
T cd05608          38 EGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR  117 (280)
T ss_pred             HHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            45678999999999999999998888  78999999999 999877643   222378888888887766          


Q ss_pred             --------hcccccCCCeEEEeecCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~   96 (100)
                              +|++++.++.+|++|||++.
T Consensus       118 i~H~dlkp~Nili~~~~~~~l~dfg~~~  145 (280)
T cd05608         118 IIYRDLKPENVLLDNDGNVRISDLGLAV  145 (280)
T ss_pred             cccCCCCHHHEEECCCCCEEEeeCccce
Confidence                    89999999999999999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.42  E-value=3.8e-12  Score=78.61  Aligned_cols=84  Identities=25%  Similarity=0.305  Sum_probs=72.6

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      ...+.+|+.+++.++|||++++.+.+.    ...++++||++ +++.+++...  .+++..+..++.|++          
T Consensus        50 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH~~~  127 (283)
T cd05080          50 TSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYLHSQH  127 (283)
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            456889999999999999999999876    45889999999 9999988764  388888888888865          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +|++++.++.+|++|||++..
T Consensus       128 i~H~dlkp~Nili~~~~~~~l~dfg~~~~  156 (283)
T cd05080         128 YIHRDLAARNVLLDNDRLVKIGDFGLAKA  156 (283)
T ss_pred             eeccccChheEEEcCCCcEEEeecccccc
Confidence                    899999999999999998753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.42  E-value=6.5e-13  Score=89.37  Aligned_cols=81  Identities=17%  Similarity=0.228  Sum_probs=71.9

Q ss_pred             HHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------------
Q 034245           15 MIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------------   76 (100)
Q Consensus        15 ~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------------   76 (100)
                      ...|-.+|.+.+++.+|+|+-.|.  +.+|+||+|++ |++..++...+. |.+..+++++..+.               
T Consensus       676 VKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgI-FeE~LARFYIAEltcAiesVHkmGFIHRD  754 (1034)
T KOG0608|consen  676 VKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGI-FEEDLARFYIAELTCAIESVHKMGFIHRD  754 (1034)
T ss_pred             hhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCccHHHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHhccceecc
Confidence            445777889999999999998898  99999999999 999999887765 88888888887754               


Q ss_pred             ---hcccccCCCeEEEeecCCCC
Q 034245           77 ---RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ---~nil~~~~~~~ki~dfgl~~   96 (100)
                         +|||++.+|++|+.||||..
T Consensus       755 iKPDNILIDrdGHIKLTDFGLCT  777 (1034)
T KOG0608|consen  755 IKPDNILIDRDGHIKLTDFGLCT  777 (1034)
T ss_pred             cCccceEEccCCceeeeeccccc
Confidence               99999999999999999974

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.42  E-value=1.5e-12  Score=83.70  Aligned_cols=47  Identities=28%  Similarity=0.400  Sum_probs=42.3

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhcc
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKY   58 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~   58 (100)
                      .+.+.+|+.++..+ +||||+++++.+.  +..++++||++ |+|.+++..
T Consensus        82 ~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~  132 (375)
T cd05104          82 REALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRR  132 (375)
T ss_pred             HHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeehhccCCcHHHHHHh
Confidence            45688999999999 8999999999998  88999999999 999988854

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.42  E-value=1.8e-12  Score=82.81  Aligned_cols=84  Identities=20%  Similarity=0.241  Sum_probs=73.7

Q ss_pred             hHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH---------------
Q 034245           14 SMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL---------------   76 (100)
Q Consensus        14 ~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~---------------   76 (100)
                      ...+|+.+++.++|||++++++.+.  ...++++|++.+++..++.....++++..+..++.|++               
T Consensus       103 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrD  182 (357)
T PHA03209        103 TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRD  182 (357)
T ss_pred             ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            4567999999999999999999988  77899999999888888876555588999888888866               


Q ss_pred             ---hcccccCCCeEEEeecCCCCC
Q 034245           77 ---RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---~nil~~~~~~~ki~dfgl~~~   97 (100)
                         +||++...+.+|++|||++..
T Consensus       183 lkp~Nill~~~~~~kl~DfG~a~~  206 (357)
T PHA03209        183 VKTENIFINDVDQVCIGDLGAAQF  206 (357)
T ss_pred             CCHHHEEECCCCCEEEecCccccc
Confidence               899999999999999999864

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.41  E-value=2.3e-12  Score=81.19  Aligned_cols=84  Identities=20%  Similarity=0.315  Sum_probs=71.7

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+.+|..++... +|||++++++.+.  +.+|+++||++ ++|...+..... ++...+..++.|++           
T Consensus        39 ~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~~~~-l~~~~~~~~~~ql~~~L~~lH~~~i  117 (320)
T cd05590          39 VECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR-FDEARARFYAAEITSALMFLHDKGI  117 (320)
T ss_pred             HHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCchHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            34567788888776 7999999999988  88999999999 999988876543 88888888887765           


Q ss_pred             -------hcccccCCCeEEEeecCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~   96 (100)
                             +||+++.++.+||+|||++.
T Consensus       118 vH~dlkp~NIli~~~~~~kL~DfG~~~  144 (320)
T cd05590         118 IYRDLKLDNVLLDHEGHCKLADFGMCK  144 (320)
T ss_pred             EeCCCCHHHeEECCCCcEEEeeCCCCe
Confidence                   89999999999999999865

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.41  E-value=1.7e-12  Score=80.07  Aligned_cols=85  Identities=13%  Similarity=0.030  Sum_probs=70.3

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  ...++++||++ ++|..++......++...+..++.|++            
T Consensus        60 ~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ii  139 (274)
T cd05076          60 ALAFFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLV  139 (274)
T ss_pred             HHHHHHHHHHHhcCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCcc
Confidence            346778899999999999999999988  88899999999 999888876544578888888888866            


Q ss_pred             ------hcccccCCC-------eEEEeecCCCC
Q 034245           77 ------RCCLLSFGK-------TVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~-------~~ki~dfgl~~   96 (100)
                            +|++++..+       .+|++|||++.
T Consensus       140 H~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~  172 (274)
T cd05076         140 HGNVCAKNILLARLGLAEGTSPFIKLSDPGVSF  172 (274)
T ss_pred             CCCCCcccEEEeccCcccCccceeeecCCcccc
Confidence                  888886533       48999999764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.41  E-value=2.4e-12  Score=78.50  Aligned_cols=83  Identities=20%  Similarity=0.255  Sum_probs=72.2

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ..+.+|+.+++.++|||++++++.+.  ...++++|+++ +++.+.+..... ++...+..++.|++             
T Consensus        49 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lH~~~i~H  127 (263)
T cd06625          49 NALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGA-LTETVTRKYTRQILEGVEYLHSNMIVH  127 (263)
T ss_pred             HHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHHhCC-CCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence            46788999999999999999999998  88999999999 899998876543 77777777777755             


Q ss_pred             -----hcccccCCCeEEEeecCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~   96 (100)
                           +|++++.++.++++|||++.
T Consensus       128 ~dl~p~nilv~~~~~~~l~dfg~~~  152 (263)
T cd06625         128 RDIKGANILRDSAGNVKLGDFGASK  152 (263)
T ss_pred             CCCCHHHEEEcCCCCEEEeecccce
Confidence                 89999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.41  E-value=2.8e-12  Score=80.92  Aligned_cols=83  Identities=18%  Similarity=0.303  Sum_probs=69.6

Q ss_pred             hhHHHHHH-HHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           13 SSMIREVS-CLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        13 ~~~~~e~~-~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ..+.+|.. +++.++|||++++++.+.  +..++++||++ +++...+.... .+++..+..++.|++            
T Consensus        40 ~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~giv  118 (325)
T cd05604          40 KHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRER-SFPEPRARFYAAEIASALGYLHSINIV  118 (325)
T ss_pred             HHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            34556655 467789999999999888  88999999999 99988876554 488888888888866            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +||+++.++.+||+|||++.
T Consensus       119 H~Dlkp~NIll~~~~~~kL~DfG~~~  144 (325)
T cd05604         119 YRDLKPENILLDSQGHVVLTDFGLCK  144 (325)
T ss_pred             ecCCCHHHeEECCCCCEEEeecCCcc
Confidence                  89999999999999999875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.41  E-value=2.8e-12  Score=80.75  Aligned_cols=84  Identities=20%  Similarity=0.293  Sum_probs=71.4

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+.+|..++..+ +|||++++++.+.  +..|+++||++ ++|...+..... +++..+..++.|++           
T Consensus        39 ~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~~i  117 (321)
T cd05591          39 VDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRK-FDEPRSRFYAAEVTLALMFLHRHGV  117 (321)
T ss_pred             HHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            34567788888765 8999999999998  88999999999 999888876543 88888888877765           


Q ss_pred             -------hcccccCCCeEEEeecCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~   96 (100)
                             +||+++.++.+||+|||++.
T Consensus       118 vHrDikp~Nill~~~~~~kL~Dfg~~~  144 (321)
T cd05591         118 IYRDLKLDNILLDAEGHCKLADFGMCK  144 (321)
T ss_pred             eccCCCHHHeEECCCCCEEEeecccce
Confidence                   89999999999999999875

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.41  E-value=3.7e-12  Score=79.62  Aligned_cols=86  Identities=24%  Similarity=0.331  Sum_probs=73.5

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCC-CCCHHHHHHHHHHhH----------
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKD-SMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~-~~~~~~~~~~~~~~~----------   76 (100)
                      .+.+.+|+.+++++ +|||++++++.+.  +..++++||++ ++|..++..... .+++..+..++.|++          
T Consensus        82 ~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~  161 (302)
T cd05055          82 REALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN  161 (302)
T ss_pred             HHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            45688999999999 7999999999888  88999999999 999999875432 278888888777765          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +|++++.++.++++|||++..
T Consensus       162 ivH~dlkp~Nil~~~~~~~~l~dfg~~~~  190 (302)
T cd05055         162 CIHRDLAARNVLLTHGKIVKICDFGLARD  190 (302)
T ss_pred             eehhhhccceEEEcCCCeEEECCCccccc
Confidence                    899999999999999998864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.41  E-value=4.9e-12  Score=78.00  Aligned_cols=86  Identities=27%  Similarity=0.356  Sum_probs=72.3

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++|||++++.+.+.  ...++++||++ +.+........ .+++..+..++.|++           
T Consensus        43 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~ql~~~l~~LH~~~i  121 (286)
T cd07847          43 IKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPR-GVPEHLIKKIIWQTLQAVNFCHKHNC  121 (286)
T ss_pred             ccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            3456789999999999999999999988  78899999999 66666655443 488888888888766           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +|++++.++.+|++|||++..
T Consensus       122 ~H~dl~p~nil~~~~~~~~l~dfg~~~~  149 (286)
T cd07847         122 IHRDVKPENILITKQGQIKLCDFGFARI  149 (286)
T ss_pred             eecCCChhhEEEcCCCcEEECcccccee
Confidence                   899999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.41  E-value=2.9e-12  Score=83.20  Aligned_cols=47  Identities=23%  Similarity=0.393  Sum_probs=41.9

Q ss_pred             hhhHHHHHHHHhhCC-CCcceeeeeeee--ccEEEEEeccc-ccHHHHhcc
Q 034245           12 PSSMIREVSCLMELN-HPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKY   58 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~-h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~   58 (100)
                      .+.+.+|+.+++.+. ||||+++++.+.  ...++++||++ |+|.+++..
T Consensus        84 ~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~  134 (400)
T cd05105          84 KQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHK  134 (400)
T ss_pred             HHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEEecCCCcHHHHHHH
Confidence            457899999999996 999999999998  88999999999 999887753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.41  E-value=4e-12  Score=77.58  Aligned_cols=86  Identities=22%  Similarity=0.238  Sum_probs=72.8

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~-----------   76 (100)
                      .+.+.+|+.+++.++|+|++++++.+.  +..++++|+++ +++.+++.... ..++...+..++.|++           
T Consensus        45 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i  124 (261)
T cd05072          45 VQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY  124 (261)
T ss_pred             HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            467889999999999999999998888  88899999999 99999886542 3367777777766655           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +|++++.++.++++|||++..
T Consensus       125 ~H~dl~p~nili~~~~~~~l~dfg~~~~  152 (261)
T cd05072         125 IHRDLRAANVLVSESLMCKIADFGLARV  152 (261)
T ss_pred             eccccchhhEEecCCCcEEECCCcccee
Confidence                   899999999999999999854

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.41  E-value=4.7e-12  Score=77.58  Aligned_cols=85  Identities=21%  Similarity=0.271  Sum_probs=72.6

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+. ...++++||++ +++.+++.... ..+++..+..++.|++            
T Consensus        45 ~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~  124 (262)
T cd05071          45 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV  124 (262)
T ss_pred             HHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            456889999999999999999998887 77899999999 99999987543 2367788777777765            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +|++++.++.+|++|||.+.
T Consensus       125 H~dl~p~Nill~~~~~~~L~dfg~~~  150 (262)
T cd05071         125 HRDLRAANILVGENLVCKVADFGLAR  150 (262)
T ss_pred             ccccCcccEEEcCCCcEEeccCCcee
Confidence                  89999999999999999875

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.41  E-value=5.3e-12  Score=77.13  Aligned_cols=87  Identities=18%  Similarity=0.250  Sum_probs=73.3

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++|+|++++++.+. ...++++||++ ++|.+++.... ..+++..+..+..|++           
T Consensus        44 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i  123 (260)
T cd05069          44 MPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNY  123 (260)
T ss_pred             cHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            3467889999999999999999998888 78899999999 89999987543 2367777777777755           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +|++++.++.++++|||++..
T Consensus       124 ~H~dl~~~Nill~~~~~~~l~dfg~~~~  151 (260)
T cd05069         124 IHRDLRAANILVGDNLVCKIADFGLARL  151 (260)
T ss_pred             eecccCcceEEEcCCCeEEECCCccceE
Confidence                   899999999999999998853

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.41  E-value=4.1e-12  Score=79.20  Aligned_cols=86  Identities=23%  Similarity=0.289  Sum_probs=73.4

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      .....+.+|+.+++.+.|+|++++.+.+.  ...++++||++ +++..++...  .++...+..++.|++          
T Consensus        59 ~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL~~LH~~g  136 (296)
T cd06654          59 PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQ  136 (296)
T ss_pred             chHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            33467889999999999999999999888  88999999999 9999988653  377888877777765          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +|++++.++.+|++|||++..
T Consensus       137 i~H~dLkp~Nill~~~~~~kl~dfg~~~~  165 (296)
T cd06654         137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQ  165 (296)
T ss_pred             cccCCCCHHHEEEcCCCCEEECccccchh
Confidence                    899999999999999998753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.41  E-value=6.9e-12  Score=77.74  Aligned_cols=86  Identities=28%  Similarity=0.388  Sum_probs=71.4

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ...+.+|+..++.++|+|++++.+.+.  ...++++||+.+++...+......++...+..++.|++             
T Consensus        47 ~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H  126 (291)
T cd07870          47 PFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILH  126 (291)
T ss_pred             cHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence            346789999999999999999999988  78899999999777776655444467777777777765             


Q ss_pred             -----hcccccCCCeEEEeecCCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~~   97 (100)
                           +|++++.++.+|++|||++..
T Consensus       127 ~dlkp~Nil~~~~~~~~l~Dfg~~~~  152 (291)
T cd07870         127 RDLKPQNLLISYLGELKLADFGLARA  152 (291)
T ss_pred             CCCChHHEEEcCCCcEEEeccccccc
Confidence                 899999999999999998754

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.40  E-value=3.2e-12  Score=77.98  Aligned_cols=87  Identities=23%  Similarity=0.269  Sum_probs=74.3

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~----------   76 (100)
                      ....+.+|+..++.++|||++++++.+.  ...++++||++ ++|.+++.... ..++...+..++.|++          
T Consensus        45 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~  124 (261)
T cd05148          45 KQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN  124 (261)
T ss_pred             hHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3567889999999999999999999888  88899999999 89999987643 3378888888777765          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +|++++.++.+|++|||++..
T Consensus       125 i~h~dl~~~nilv~~~~~~kl~d~g~~~~  153 (261)
T cd05148         125 SIHRDLAARNILVGEDLVCKVADFGLARL  153 (261)
T ss_pred             eeccccCcceEEEcCCceEEEccccchhh
Confidence                    899999999999999998753

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.40  E-value=3.4e-12  Score=79.13  Aligned_cols=85  Identities=19%  Similarity=0.231  Sum_probs=72.2

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~------------   76 (100)
                      ..+.+|+.+++.++|||++++++.+.  ...++++||++ ++|...+.... ..+++..+..++.|++            
T Consensus        45 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv  124 (285)
T cd05605          45 AMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIV  124 (285)
T ss_pred             HHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcE
Confidence            45678999999999999999999888  88999999999 99988775432 3488888888877765            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +|++++.++.++++|||++..
T Consensus       125 H~dlkp~Nil~~~~~~~~l~Dfg~~~~  151 (285)
T cd05605         125 YRDLKPENILLDDYGHIRISDLGLAVE  151 (285)
T ss_pred             ecCCCHHHEEECCCCCEEEeeCCCcee
Confidence                  899999999999999998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.40  E-value=3.6e-12  Score=78.73  Aligned_cols=85  Identities=26%  Similarity=0.355  Sum_probs=72.2

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC--------------CCCCHHHHHHHHHH
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK--------------DSMDGYSIKFSSSD   74 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~--------------~~~~~~~~~~~~~~   74 (100)
                      ...+.+|+++++.++|+|++++++.+.  ...++++||++ ++|.+++....              ..+++..+..++.|
T Consensus        51 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q  130 (280)
T cd05092          51 RQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQ  130 (280)
T ss_pred             HHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHH
Confidence            457889999999999999999999888  78899999999 99999887543              12677777777777


Q ss_pred             hH------------------hcccccCCCeEEEeecCCCC
Q 034245           75 SL------------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        75 ~~------------------~nil~~~~~~~ki~dfgl~~   96 (100)
                      ++                  +|++++.++.+|++|||++.
T Consensus       131 i~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~  170 (280)
T cd05092         131 IASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSR  170 (280)
T ss_pred             HHHHHHHHHHCCeecccccHhhEEEcCCCCEEECCCCcee
Confidence            55                  89999999999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.40  E-value=4.3e-12  Score=79.11  Aligned_cols=85  Identities=24%  Similarity=0.295  Sum_probs=72.7

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ..+.+.+|+.+++.++|+|++++.+.+.  ...++++||++ +++.+++...  .++...+..++.|++           
T Consensus        59 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~l~~~L~~LH~~~i  136 (297)
T cd06656          59 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALDFLHSNQV  136 (297)
T ss_pred             hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            3456888999999999999999999988  88999999999 9999988653  377778777777755           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +|++++.++.++++|||++..
T Consensus       137 ~H~dL~p~Nili~~~~~~~l~Dfg~~~~  164 (297)
T cd06656         137 IHRDIKSDNILLGMDGSVKLTDFGFCAQ  164 (297)
T ss_pred             ccCCCCHHHEEECCCCCEEECcCccceE
Confidence                   899999999999999998753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.40  E-value=1.6e-12  Score=83.55  Aligned_cols=86  Identities=24%  Similarity=0.291  Sum_probs=71.2

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC---------------------------
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK---------------------------   60 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~---------------------------   60 (100)
                      .+.+.+|+.+++.+ +|+|++++++.+.  +..++++||++ |+|.+++....                           
T Consensus        85 ~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (374)
T cd05106          85 REALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEK  164 (374)
T ss_pred             HHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhc
Confidence            45688999999999 8999999999988  88999999999 99998875321                           


Q ss_pred             ------------------------------------------CCCCHHHHHHHHHHhH------------------hccc
Q 034245           61 ------------------------------------------DSMDGYSIKFSSSDSL------------------RCCL   80 (100)
Q Consensus        61 ------------------------------------------~~~~~~~~~~~~~~~~------------------~nil   80 (100)
                                                                .+++...+..++.|++                  +|++
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil  244 (374)
T cd05106         165 KYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVL  244 (374)
T ss_pred             ccccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEE
Confidence                                                      1256666777777765                  8999


Q ss_pred             ccCCCeEEEeecCCCCC
Q 034245           81 LSFGKTVKVADLQALDW   97 (100)
Q Consensus        81 ~~~~~~~ki~dfgl~~~   97 (100)
                      ++.++.+|++|||++..
T Consensus       245 ~~~~~~~kL~DfGla~~  261 (374)
T cd05106         245 LTDGRVAKICDFGLARD  261 (374)
T ss_pred             EeCCCeEEEeeceeeee
Confidence            99999999999998753

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.40  E-value=4.7e-12  Score=78.48  Aligned_cols=85  Identities=19%  Similarity=0.245  Sum_probs=72.1

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~------------   76 (100)
                      ..+.+|+.+++.++|++++.+.+.+.  +..++++||++ ++|...+.... ..+++..+..++.|++            
T Consensus        45 ~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ii  124 (285)
T cd05631          45 AMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIV  124 (285)
T ss_pred             HHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence            35778999999999999999999888  88999999999 99987775432 2478888888877765            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +|++++.++.+|++|||++..
T Consensus       125 H~dikp~Nill~~~~~~kl~Dfg~~~~  151 (285)
T cd05631         125 YRDLKPENILLDDRGHIRISDLGLAVQ  151 (285)
T ss_pred             eCCCCHHHEEECCCCCEEEeeCCCcEE
Confidence                  899999999999999998753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.40  E-value=3e-12  Score=80.87  Aligned_cols=84  Identities=17%  Similarity=0.259  Sum_probs=72.4

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+.+|+.++.++ +||+++.+++.+.  +..++++||++ ++|...+.... .+++..+..++.|++           
T Consensus        39 ~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~al~~lH~~~i  117 (327)
T cd05617          39 IDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQR-KLPEEHARFYAAEICIALNFLHERGI  117 (327)
T ss_pred             HHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            34577899988887 6999999999888  88999999999 99988876554 389999888888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~   96 (100)
                             +||+++.++.+||+|||++.
T Consensus       118 vHrDlkp~Nili~~~~~~kl~Dfg~~~  144 (327)
T cd05617         118 IYRDLKLDNVLLDADGHIKLTDYGMCK  144 (327)
T ss_pred             eccCCCHHHEEEeCCCCEEEeccccce
Confidence                   89999999999999999875

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.40  E-value=2.8e-12  Score=88.06  Aligned_cols=95  Identities=21%  Similarity=0.285  Sum_probs=77.7

Q ss_pred             eccCCCCcchhhHHHHHHHHhhC-CCCcceeeeeeee-------ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHH
Q 034245            3 EIHNTMEEVPSSMIREVSCLMEL-NHPNIIRLMLVVS-------QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSS   72 (100)
Q Consensus         3 ~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~-------~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~   72 (100)
                      |+-.-+...-+++.-|.++++.. +|||++.+++++.       +.+|+|||||. |+..++++.-. ..+.+..+..++
T Consensus        50 kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~  129 (953)
T KOG0587|consen   50 KIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYIL  129 (953)
T ss_pred             EeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHH
Confidence            33334444456777788889887 7999999999987       88999999999 99999988643 338888888888


Q ss_pred             HHhH------------------hcccccCCCeEEEeecCCCCC
Q 034245           73 SDSL------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        73 ~~~~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      +.++                  .||++..++.+|+.|||++..
T Consensus       130 re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQ  172 (953)
T KOG0587|consen  130 REILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ  172 (953)
T ss_pred             HHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeee
Confidence            7765                  899999999999999998753

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.40  E-value=3.4e-12  Score=80.32  Aligned_cols=84  Identities=20%  Similarity=0.316  Sum_probs=72.2

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+.+|..++..+ +|||++++++.+.  ...++++||++ ++|...+.... .+++..+..++.|++           
T Consensus        39 ~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~i  117 (318)
T cd05570          39 VECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSG-RFDEPRARFYAAEIVLGLQFLHERGI  117 (318)
T ss_pred             HHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            34567888888877 7999999999988  88999999999 99988887654 388998888888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~   96 (100)
                             +||+++.++.+|++|||++.
T Consensus       118 vH~dlkp~Nill~~~~~~kl~Dfg~~~  144 (318)
T cd05570         118 IYRDLKLDNVLLDSEGHIKIADFGMCK  144 (318)
T ss_pred             EccCCCHHHeEECCCCcEEecccCCCe
Confidence                   89999999999999999874

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.40  E-value=6.8e-12  Score=76.13  Aligned_cols=87  Identities=23%  Similarity=0.372  Sum_probs=73.5

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++|+|++++.+.+.  ...++++|+++ +++.+++......++...+..++.+++           
T Consensus        35 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i  114 (251)
T cd05041          35 LKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNC  114 (251)
T ss_pred             HHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            3457889999999999999999999888  88999999998 999999866544477777777766654           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +|++++.++.+|++|||++..
T Consensus       115 ~h~di~p~nili~~~~~~~l~d~g~~~~  142 (251)
T cd05041         115 IHRDLAARNCLVGENNVLKISDFGMSRE  142 (251)
T ss_pred             ehhhcCcceEEEcCCCcEEEeecccccc
Confidence                   899999999999999998764

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.40  E-value=4e-12  Score=77.76  Aligned_cols=83  Identities=24%  Similarity=0.331  Sum_probs=72.2

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      +.+.+|+.++++++|||++++.+.+.  ...++++||++ ++|..++.... .++...+..++.|++             
T Consensus        51 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~l~~~l~~lH~~~ivH  129 (267)
T cd06628          51 DALAREIALLKELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYG-AFEETLVRNFVRQILKGLNYLHNRGIIH  129 (267)
T ss_pred             HHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEEEEEecCCCCHHHHHHhcc-CccHHHHHHHHHHHHHHHHHHHhcCccc
Confidence            46788999999999999999999988  88899999999 89999987654 378888777777765             


Q ss_pred             -----hcccccCCCeEEEeecCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~   96 (100)
                           +|++++.++.++++|||.+.
T Consensus       130 ~di~p~nil~~~~~~~~l~dfg~~~  154 (267)
T cd06628         130 RDIKGANILVDNKGGIKISDFGISK  154 (267)
T ss_pred             ccCCHHHEEEcCCCCEEecccCCCc
Confidence                 89999999999999999764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.40  E-value=5e-12  Score=78.27  Aligned_cols=88  Identities=31%  Similarity=0.363  Sum_probs=71.0

Q ss_pred             cchhhHHHHHHHHhhC---CCCcceeeeeeee-------ccEEEEEecccccHHHHhccCC-CCCCHHHHHHHHHHhH--
Q 034245           10 EVPSSMIREVSCLMEL---NHPNIIRLMLVVS-------QGLCLFLEYQANDLAYLLKYPK-DSMDGYSIKFSSSDSL--   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l---~h~~iv~l~~~~~-------~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~--   76 (100)
                      +....+.+|+..++.+   +|||++++++++.       ..+++++|++++++.+++.... ..+++..+..++.|++  
T Consensus        43 ~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~a  122 (290)
T cd07862          43 GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG  122 (290)
T ss_pred             CchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence            3345677888877766   6999999999874       4589999999988888886543 3378888888888866  


Q ss_pred             ----------------hcccccCCCeEEEeecCCCCC
Q 034245           77 ----------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                      +|++++.++.+|++|||++..
T Consensus       123 L~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~  159 (290)
T cd07862         123 LDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI  159 (290)
T ss_pred             HHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEe
Confidence                            899999999999999998754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.40  E-value=3e-12  Score=82.73  Aligned_cols=83  Identities=17%  Similarity=0.144  Sum_probs=72.1

Q ss_pred             hHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH---------------
Q 034245           14 SMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL---------------   76 (100)
Q Consensus        14 ~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~---------------   76 (100)
                      ...+|+.+++.++|||++++++.+.  ...++++|++.+++..++.... .+++..+..++.|++               
T Consensus       132 ~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~l~~~~~~~i~~ql~~aL~~LH~~givHrD  210 (392)
T PHA03207        132 TPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYKCDLFTYVDRSG-PLPLEQAITIQRRLLEALAYLHGRGIIHRD  210 (392)
T ss_pred             cHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            3568999999999999999999888  7899999999888888885443 489999888888866               


Q ss_pred             ---hcccccCCCeEEEeecCCCCC
Q 034245           77 ---RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---~nil~~~~~~~ki~dfgl~~~   97 (100)
                         +|+++...+.++|+|||++..
T Consensus       211 lkp~Nill~~~~~~~l~DfG~a~~  234 (392)
T PHA03207        211 VKTENIFLDEPENAVLGDFGAACK  234 (392)
T ss_pred             CCHHHEEEcCCCCEEEccCccccc
Confidence               899999999999999998854

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.40  E-value=2.1e-12  Score=82.82  Aligned_cols=85  Identities=16%  Similarity=0.244  Sum_probs=72.9

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--c-----cEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH--------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--Q-----GLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~-----~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~--------   76 (100)
                      ...+.+|+.+++.++|+|++++++.+.  .     ..++++||+.+++...+.... .++...+..++.|++        
T Consensus        43 ~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~  121 (372)
T cd07853          43 CKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQSDLHKIIVSPQ-PLSSDHVKVFLYQILRGLKYLHS  121 (372)
T ss_pred             HHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEeeccccCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            356889999999999999999999887  3     689999999988888776544 388888888888866        


Q ss_pred             ----------hcccccCCCeEEEeecCCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                +||+++.++.+||+|||++..
T Consensus       122 ~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~  152 (372)
T cd07853         122 AGILHRDIKPGNLLVNSNCVLKICDFGLARV  152 (372)
T ss_pred             CCeeCCCCChHHEEECCCCCEEeccccceee
Confidence                      899999999999999998753

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.40  E-value=3.6e-12  Score=78.19  Aligned_cols=85  Identities=14%  Similarity=0.100  Sum_probs=71.2

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+..++.++|||++++++++.  ...++++||++ +++..++.....++++..+..++.|++            
T Consensus        48 ~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iv  127 (262)
T cd05077          48 SLAFFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLV  127 (262)
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeE
Confidence            446778899999999999999999988  77899999999 888888776555588888888888866            


Q ss_pred             ------hcccccCCCe-------EEEeecCCCC
Q 034245           77 ------RCCLLSFGKT-------VKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~-------~ki~dfgl~~   96 (100)
                            +|+++..++.       ++++|||++.
T Consensus       128 H~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~  160 (262)
T cd05077         128 HGNVCTKNILLAREGIDGECGPFIKLSDPGIPI  160 (262)
T ss_pred             CCCCCcccEEEecCCccCCCCceeEeCCCCCCc
Confidence                  8999976553       8999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.40  E-value=3.7e-12  Score=80.16  Aligned_cols=83  Identities=20%  Similarity=0.339  Sum_probs=70.0

Q ss_pred             hhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           13 SSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ....+|..++... +|||++++++.+.  ...++++||++ ++|...+.... .++...+..++.|++            
T Consensus        40 ~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH~~~iv  118 (316)
T cd05592          40 ECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSG-RFDEARARFYAAEIICGLQFLHKKGII  118 (316)
T ss_pred             HHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence            4456677777654 8999999999988  88999999999 99998887654 388888888888866            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +||+++.++.+||+|||++.
T Consensus       119 H~dlkp~Nill~~~~~~kL~Dfg~a~  144 (316)
T cd05592         119 YRDLKLDNVLLDKDGHIKIADFGMCK  144 (316)
T ss_pred             eCCCCHHHeEECCCCCEEEccCcCCe
Confidence                  89999999999999999875

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.40  E-value=3e-12  Score=80.08  Aligned_cols=86  Identities=27%  Similarity=0.300  Sum_probs=73.1

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ...+.+|+.+++.++|||++++.+.+.  ...++++||+++++.+.+.....++++..+..++.|++             
T Consensus        59 ~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H  138 (307)
T cd06607          59 WQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIH  138 (307)
T ss_pred             HHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence            356889999999999999999999988  88899999999887777665444588888888877765             


Q ss_pred             -----hcccccCCCeEEEeecCCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~~   97 (100)
                           +||+++.++.+|++|||++..
T Consensus       139 ~dl~p~nIl~~~~~~~kL~dfg~~~~  164 (307)
T cd06607         139 RDIKAGNILLTEPGTVKLADFGSASL  164 (307)
T ss_pred             cCCCcccEEECCCCCEEEeecCccee
Confidence                 899999999999999998753

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.40  E-value=4.9e-12  Score=77.63  Aligned_cols=85  Identities=21%  Similarity=0.290  Sum_probs=69.3

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCC----CCCHHHHHHHHHHhH---------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKD----SMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~----~~~~~~~~~~~~~~~---------   76 (100)
                      ..+.+|+.+++.++|||++++++.+.  ...++++||++ ++|.+++.....    ..+...+..++.|++         
T Consensus        40 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~  119 (269)
T cd05087          40 MKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN  119 (269)
T ss_pred             HHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC
Confidence            46888999999999999999999888  77899999999 999998865321    244555556666654         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               +|++++.++.+|++|||++..
T Consensus       120 ~i~H~dlkp~nil~~~~~~~kL~dfg~~~~  149 (269)
T cd05087         120 NFIHSDLALRNCLLTADLTVKIGDYGLSHN  149 (269)
T ss_pred             CEeccccCcceEEEcCCCcEEECCcccccc
Confidence                     899999999999999998853

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.40  E-value=5.7e-12  Score=78.82  Aligned_cols=87  Identities=32%  Similarity=0.427  Sum_probs=73.4

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      ....+.+|+.++++++|+|++++.+.+.    +..++++||+.+++...+......+++..+..++.|++          
T Consensus        49 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~  128 (309)
T cd07845          49 IPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENF  128 (309)
T ss_pred             CcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3445678999999999999999999886    46899999999888887776544588888888888866          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +|++++.++.+|++|||++..
T Consensus       129 i~H~dl~p~nil~~~~~~~kL~dfg~~~~  157 (309)
T cd07845         129 IIHRDLKVSNLLLTDKGCLKIADFGLART  157 (309)
T ss_pred             eecCCCCHHHEEECCCCCEEECccceeee
Confidence                    899999999999999998754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.39  E-value=7.2e-12  Score=77.72  Aligned_cols=86  Identities=27%  Similarity=0.382  Sum_probs=73.3

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+.+|+..+++++|||++++.+.+.    ...++++||+++++...+......++...+..++.|++           
T Consensus        48 ~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i  127 (293)
T cd07843          48 PITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWI  127 (293)
T ss_pred             hhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            345778999999999999999999877    67999999999888888766544588888888888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+|++|||++..
T Consensus       128 ~H~dl~p~nili~~~~~~~l~d~g~~~~  155 (293)
T cd07843         128 LHRDLKTSNLLLNNRGILKICDFGLARE  155 (293)
T ss_pred             eeccCCHHHEEECCCCcEEEeecCceee
Confidence                   899999999999999998753

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.39  E-value=6.8e-12  Score=77.35  Aligned_cols=88  Identities=25%  Similarity=0.413  Sum_probs=76.2

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      +....+.+|+.+++.++|||++++.+.+.  ...++++||+.++|...+.....++++..+..++.|++           
T Consensus        41 ~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  120 (286)
T cd07832          41 GIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGI  120 (286)
T ss_pred             hhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            34567889999999999999999999988  88999999999889998876555588888888887765           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +|++++.++.++++|||++..
T Consensus       121 ~H~dl~p~ni~~~~~~~~~l~dfg~~~~  148 (286)
T cd07832         121 MHRDLKPANLLISADGVLKIADFGLARL  148 (286)
T ss_pred             ecCCcCHHHEEEcCCCcEEEeeeeeccc
Confidence                   899999999999999998764

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.39  E-value=4.2e-12  Score=77.50  Aligned_cols=85  Identities=21%  Similarity=0.287  Sum_probs=70.5

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee---ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS---QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~---~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.   +..++++||++ +++.+++.......+...+..++.|++           
T Consensus        40 ~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  119 (262)
T cd05058          40 VEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKF  119 (262)
T ss_pred             HHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            456888999999999999999999775   56889999999 999999876543356666666666654           


Q ss_pred             -------hcccccCCCeEEEeecCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~   96 (100)
                             +|++++.++.+|++|||++.
T Consensus       120 ~H~dlk~~nili~~~~~~kl~dfg~~~  146 (262)
T cd05058         120 VHRDLAARNCMLDESFTVKVADFGLAR  146 (262)
T ss_pred             cccccCcceEEEcCCCcEEECCccccc
Confidence                   89999999999999999875

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.39  E-value=5.9e-12  Score=78.51  Aligned_cols=86  Identities=24%  Similarity=0.342  Sum_probs=73.4

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      .....+.+|+..++.++|||++++.+.+.  ...++++||++ +++...+...  .+++..+..++.|++          
T Consensus        58 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~~  135 (296)
T cd06655          58 PKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLHANQ  135 (296)
T ss_pred             chHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34567889999999999999999999988  88999999999 9999888654  378888888777754          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +|++++.++.+|++|||++..
T Consensus       136 i~H~dL~p~Nili~~~~~~kl~dfg~~~~  164 (296)
T cd06655         136 VIHRDIKSDNVLLGMDGSVKLTDFGFCAQ  164 (296)
T ss_pred             cccCCCCHHHEEECCCCCEEEccCccchh
Confidence                    899999999999999998653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.39  E-value=9e-12  Score=76.00  Aligned_cols=87  Identities=20%  Similarity=0.281  Sum_probs=74.4

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~----------   76 (100)
                      ....+.+|+..++.++|+|++++++.+.  ...++++|+++ ++|.+++.... ..++...+..+..|++          
T Consensus        44 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~  123 (261)
T cd05034          44 SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN  123 (261)
T ss_pred             CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3467899999999999999999999988  88999999999 99999987644 2378888887777755          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +|++++.++.+|++|||++..
T Consensus       124 i~h~di~p~nili~~~~~~~l~d~g~~~~  152 (261)
T cd05034         124 YIHRDLAARNILVGENLVCKIADFGLARL  152 (261)
T ss_pred             cccCCcchheEEEcCCCCEEECcccccee
Confidence                    899999999999999998754

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.39  E-value=4.5e-12  Score=79.90  Aligned_cols=83  Identities=19%  Similarity=0.311  Sum_probs=69.1

Q ss_pred             hhHHHHHH-HHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           13 SSMIREVS-CLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        13 ~~~~~e~~-~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ..+.+|.. +++.++|||++++++.+.  ...++++||++ ++|...+.... .+++..+..++.|++            
T Consensus        40 ~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~giv  118 (323)
T cd05575          40 KHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRER-SFPEPRARFYAAEIASALGYLHSLNII  118 (323)
T ss_pred             HHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence            34555555 457789999999999888  88999999999 99988887654 388888888877766            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +||+++.++.+|++|||++.
T Consensus       119 H~dikp~NIll~~~~~~kl~Dfg~~~  144 (323)
T cd05575         119 YRDLKPENILLDSQGHVVLTDFGLCK  144 (323)
T ss_pred             eCCCCHHHeEECCCCcEEEeccCCCc
Confidence                  89999999999999999875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.39  E-value=4.4e-12  Score=78.28  Aligned_cols=88  Identities=33%  Similarity=0.420  Sum_probs=73.4

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCC-CCCCHHHHHHHHHHhH----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPK-DSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~----------   76 (100)
                      .....+.+|+..++.++|||++++.+.+.  ...++++||+.+++...+.... ..++...+..++.|++          
T Consensus        41 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~  120 (284)
T cd07860          41 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR  120 (284)
T ss_pred             ccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34457889999999999999999999988  8899999999877887775432 3478888888877765          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +|++++.++.+|++|||++..
T Consensus       121 i~H~~l~p~nill~~~~~~~l~dfg~~~~  149 (284)
T cd07860         121 VLHRDLKPQNLLINTEGAIKLADFGLARA  149 (284)
T ss_pred             eecCCCCHHHEEECCCCCEEEeeccchhh
Confidence                    899999999999999998753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.39  E-value=1e-11  Score=75.60  Aligned_cols=85  Identities=25%  Similarity=0.433  Sum_probs=72.7

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.++++++||+++++++.+.  ...++++||++ ++|.+.+......+++..+..++.|++            
T Consensus        43 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~  122 (256)
T cd05112          43 EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVI  122 (256)
T ss_pred             HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            356889999999999999999999888  88899999999 999998876554578887777776654            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +|++++.++.+|++|||++.
T Consensus       123 h~dl~p~ni~i~~~~~~~l~d~g~~~  148 (256)
T cd05112         123 HRDLAARNCLVGENQVVKVSDFGMTR  148 (256)
T ss_pred             ccccccceEEEcCCCeEEECCCccee
Confidence                  89999999999999999864

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.39  E-value=5.2e-12  Score=77.26  Aligned_cols=83  Identities=17%  Similarity=0.245  Sum_probs=72.5

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ..+.+|+..++.++|+|++++.+.+.  +..++++||++ ++|.+++.... +++...+..++.|++             
T Consensus        47 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H  125 (265)
T cd06631          47 EKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFG-PLPEPVFCKYTKQILDGVAYLHNNCVVH  125 (265)
T ss_pred             HHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence            45888999999999999999999988  88999999999 89999987654 378888877777765             


Q ss_pred             -----hcccccCCCeEEEeecCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~   96 (100)
                           +|+++..++.++++|||++.
T Consensus       126 ~dl~p~nil~~~~~~~~l~dfg~~~  150 (265)
T cd06631         126 RDIKGNNVMLMPNGIIKLIDFGCAR  150 (265)
T ss_pred             CCcCHHhEEECCCCeEEeccchhhH
Confidence                 89999999999999999875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.39  E-value=5.6e-12  Score=79.37  Aligned_cols=83  Identities=20%  Similarity=0.305  Sum_probs=70.5

Q ss_pred             hhHHHHHHHHhh-CCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           13 SSMIREVSCLME-LNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~-l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ....+|..++.. .+|||++++++.+.  ...++++||++ ++|...+.... .++...+..++.|++            
T Consensus        40 ~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~LH~~~iv  118 (316)
T cd05619          40 ECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCH-KFDLPRATFYAAEIICGLQFLHSKGIV  118 (316)
T ss_pred             HHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence            456678888876 49999999999988  88999999999 99999987654 378888888877765            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +|++++.++.+|++|||++.
T Consensus       119 Hrdikp~Nil~~~~~~~kl~Dfg~~~  144 (316)
T cd05619         119 YRDLKLDNILLDTDGHIKIADFGMCK  144 (316)
T ss_pred             eCCCCHHHEEECCCCCEEEccCCcce
Confidence                  89999999999999999875

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.39  E-value=4.3e-12  Score=79.99  Aligned_cols=83  Identities=22%  Similarity=0.303  Sum_probs=69.1

Q ss_pred             hhhHHHHHHHH---hhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245           12 PSSMIREVSCL---MELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        12 ~~~~~~e~~~l---~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      ...+.+|+.++   +.++|||++++++.+.  ...|+++||++ ++|...+...  .+++..+..++.|++         
T Consensus        43 ~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~al~~lH~~  120 (324)
T cd05589          43 VESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHTD--VFSEPRAVFYAACVVLGLQYLHEN  120 (324)
T ss_pred             HHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcCCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC
Confidence            34566676655   5668999999999988  88999999999 9998887653  388888888888866         


Q ss_pred             ---------hcccccCCCeEEEeecCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~   96 (100)
                               +||+++.++.+|++|||++.
T Consensus       121 ~ivHrdlkp~Nill~~~~~~kL~Dfg~~~  149 (324)
T cd05589         121 KIVYRDLKLDNLLLDTEGFVKIADFGLCK  149 (324)
T ss_pred             CeEecCCCHHHeEECCCCcEEeCcccCCc
Confidence                     89999999999999999864

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.38  E-value=4.1e-12  Score=78.07  Aligned_cols=86  Identities=22%  Similarity=0.248  Sum_probs=70.4

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC---CCCCHHHHHHHHHHhH--------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK---DSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~---~~~~~~~~~~~~~~~~--------   76 (100)
                      ....+.+|+..++.++|||++++++.+.  ...++++||++ ++|..++....   ...+...+..++.|++        
T Consensus        38 ~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~  117 (268)
T cd05086          38 EQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHK  117 (268)
T ss_pred             HHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH
Confidence            3457899999999999999999999988  78899999999 99999887532   1245555566666654        


Q ss_pred             ----------hcccccCCCeEEEeecCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~   96 (100)
                                +|++++.++.+|++|||++.
T Consensus       118 ~~i~H~dikp~nil~~~~~~~~l~Dfg~~~  147 (268)
T cd05086         118 HNFLHSDLALRNCFLTSDLTVKVGDYGIGP  147 (268)
T ss_pred             CCeeccCCccceEEEcCCccEEeccccccc
Confidence                      89999999999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.38  E-value=6.3e-12  Score=76.78  Aligned_cols=86  Identities=23%  Similarity=0.299  Sum_probs=74.2

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++|||++++.+.+.  ...++++||++ ++|.+++..... ++...+..++.|++           
T Consensus        36 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-l~~~~~~~~~~~i~~~l~~lH~~~~  114 (262)
T cd05572          36 QQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDRGL-FDEYTARFYIACVVLAFEYLHNRGI  114 (262)
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHhhCCc
Confidence            3456889999999999999999999888  88999999999 999999876543 78888877777765           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +|++++.++.++++|||++..
T Consensus       115 ~h~dl~~~nilv~~~~~~~l~df~~~~~  142 (262)
T cd05572         115 IYRDLKPENLLLDSNGYVKLVDFGFAKK  142 (262)
T ss_pred             ccCCCCHHHEEEcCCCCEEEeeCCcccc
Confidence                   899999999999999998764

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.38  E-value=6.8e-12  Score=77.22  Aligned_cols=88  Identities=26%  Similarity=0.308  Sum_probs=75.1

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      ....+.+|+..++.++|||++++.+.+.    ...++++||++ +++..++......++...+..++.|++         
T Consensus        49 ~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~  128 (284)
T cd05038          49 HRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQ  128 (284)
T ss_pred             HHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhC
Confidence            3567899999999999999999998876    46899999999 999999977654478888888877765         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                               +|++++.++.++++|||++...
T Consensus       129 ~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  159 (284)
T cd05038         129 RYIHRDLAARNILVESEDLVKISDFGLAKVL  159 (284)
T ss_pred             CeecCCCCHHhEEEcCCCCEEEccccccccc
Confidence                     8999999999999999988653

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.38  E-value=7.6e-12  Score=76.19  Aligned_cols=87  Identities=25%  Similarity=0.262  Sum_probs=75.2

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCC-CCCHHHHHHHHHHhH----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKD-SMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~-~~~~~~~~~~~~~~~----------   76 (100)
                      ....+.+|+.+++.++|+|++++++.+.  ...++++|+++ +++.+++..... .+++..+..+..|++          
T Consensus        43 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~  122 (256)
T cd05039          43 AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN  122 (256)
T ss_pred             HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3467889999999999999999999988  88999999999 999999876542 378888888887765          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +|++++.++.+|++|||.+..
T Consensus       123 i~H~di~p~Nili~~~~~~~l~d~g~~~~  151 (256)
T cd05039         123 FVHRDLAARNVLVSEDLVAKVSDFGLAKE  151 (256)
T ss_pred             ccchhcccceEEEeCCCCEEEcccccccc
Confidence                    899999999999999998764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.38  E-value=5.8e-12  Score=77.75  Aligned_cols=88  Identities=25%  Similarity=0.268  Sum_probs=72.2

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      ......+.+|+.+++.++|+|++++.+.+.  +..++++||++ +.+...... ..+++...+..++.|++         
T Consensus        41 ~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~  119 (288)
T cd07833          41 EDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEAS-PGGLPPDAVRSYIWQLLQAIAYCHSH  119 (288)
T ss_pred             ccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            344567899999999999999999999998  88999999999 555544443 33488888887777765         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               +|++++.++.+|++|||++..
T Consensus       120 ~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~  149 (288)
T cd07833         120 NIIHRDIKPENILVSESGVLKLCDFGFARA  149 (288)
T ss_pred             CeecCCCCHHHeEECCCCCEEEEeeecccc
Confidence                     899999999999999998754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.38  E-value=6e-12  Score=77.61  Aligned_cols=86  Identities=15%  Similarity=0.174  Sum_probs=74.5

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ...+.+|+..++.++|||++.+.+.+. ...++++++++ |++.+.+......++...+..++.|++             
T Consensus        53 ~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH  132 (279)
T cd05109          53 NKEILDEAYVMAGVGSPYVCRLLGICLTSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVH  132 (279)
T ss_pred             HHHHHHHHHHHHhcCCCCCceEEEEEcCCCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence            456888999999999999999999888 77889999999 999999876544488888888888866             


Q ss_pred             -----hcccccCCCeEEEeecCCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~~   97 (100)
                           +|+++..++.+|++|||++..
T Consensus       133 ~dlkp~Nil~~~~~~~kL~dfG~~~~  158 (279)
T cd05109         133 RDLAARNVLVKSPNHVKITDFGLARL  158 (279)
T ss_pred             cccccceEEEcCCCcEEECCCCceee
Confidence                 899999999999999998754

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.38  E-value=6.3e-12  Score=77.06  Aligned_cols=87  Identities=21%  Similarity=0.249  Sum_probs=71.7

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCC--CHHHHHHHHHHhH---------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSM--DGYSIKFSSSDSL---------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~--~~~~~~~~~~~~~---------   76 (100)
                      ..+.+.+|+.+++.++|+|++++.+.+.  +..++++||++ ++|..++.....++  +...+..+..|++         
T Consensus        48 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~  127 (268)
T cd06624          48 YVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN  127 (268)
T ss_pred             HHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC
Confidence            3457889999999999999999999988  88999999999 99999987653334  6777777766655         


Q ss_pred             ---------hcccccC-CCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSF-GKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~-~~~~ki~dfgl~~~   97 (100)
                               +||+++. .+.++++|||++..
T Consensus       128 ~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~  158 (268)
T cd06624         128 QIVHRDIKGDNVLVNTYSGVVKISDFGTSKR  158 (268)
T ss_pred             CEeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence                     8999975 67999999998743

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.38  E-value=9.5e-12  Score=75.98  Aligned_cols=86  Identities=22%  Similarity=0.309  Sum_probs=73.4

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~------------   76 (100)
                      ..++.+|+.++++++|++++++++.+. ...++++||++ ++|.+.+.... ..++...+..++.|++            
T Consensus        45 ~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~  124 (260)
T cd05070          45 PESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYI  124 (260)
T ss_pred             HHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            457889999999999999999999887 77899999999 99999887543 2378888888877765            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +|++++.++.++++|||++..
T Consensus       125 H~di~p~Nili~~~~~~~l~dfg~~~~  151 (260)
T cd05070         125 HRDLRSANILVGDGLVCKIADFGLARL  151 (260)
T ss_pred             cCCCccceEEEeCCceEEeCCceeeee
Confidence                  899999999999999998753

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.38  E-value=5.9e-12  Score=77.36  Aligned_cols=85  Identities=25%  Similarity=0.351  Sum_probs=71.4

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC---------------CCCCHHHHHHHH
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK---------------DSMDGYSIKFSS   72 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~---------------~~~~~~~~~~~~   72 (100)
                      .+.+.+|+..+.++ +|||++++++.+.  +..++++||++ ++|.+++....               ..++...+..++
T Consensus        39 ~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  118 (270)
T cd05047          39 HRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA  118 (270)
T ss_pred             HHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHH
Confidence            35688899999999 8999999999988  78999999999 99999986532               126677777777


Q ss_pred             HHhH------------------hcccccCCCeEEEeecCCCC
Q 034245           73 SDSL------------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        73 ~~~~------------------~nil~~~~~~~ki~dfgl~~   96 (100)
                      .|++                  +|++++.++.+|++|||++.
T Consensus       119 ~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~  160 (270)
T cd05047         119 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR  160 (270)
T ss_pred             HHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCcc
Confidence            7655                  89999999999999999874

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.38  E-value=9.3e-12  Score=75.55  Aligned_cols=87  Identities=26%  Similarity=0.386  Sum_probs=76.1

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccC--------CCCCCHHHHHHHHHHhH----
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYP--------KDSMDGYSIKFSSSDSL----   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~--------~~~~~~~~~~~~~~~~~----   76 (100)
                      ...+.+|+..+..++|+|++++++.+.  ...++++||++ ++|.+++...        ...+++..+..++.|++    
T Consensus        40 ~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~  119 (262)
T cd00192          40 RKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGME  119 (262)
T ss_pred             HHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHH
Confidence            467889999999999999999999988  88999999998 9999998875        34488988888888865    


Q ss_pred             --------------hcccccCCCeEEEeecCCCCCC
Q 034245           77 --------------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 --------------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                                    +|++++.++.+|++|||.+...
T Consensus       120 ~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~  155 (262)
T cd00192         120 YLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDV  155 (262)
T ss_pred             HHHcCCcccCccCcceEEECCCCcEEEccccccccc
Confidence                          8999999999999999988643

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.38  E-value=7.5e-12  Score=76.02  Aligned_cols=86  Identities=20%  Similarity=0.257  Sum_probs=75.3

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      .+.+.+|+..++.++|||++++.+.+.  ...++++|+++ ++|.+.+......+++..+..++.|++            
T Consensus        42 ~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~  121 (256)
T cd06612          42 LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKI  121 (256)
T ss_pred             HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            467889999999999999999999988  88999999999 999999876555588888888877765            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +|++++.++.++++|||++..
T Consensus       122 H~dl~~~ni~~~~~~~~~l~dfg~~~~  148 (256)
T cd06612         122 HRDIKAGNILLNEEGQAKLADFGVSGQ  148 (256)
T ss_pred             cCCCCcceEEECCCCcEEEcccccchh
Confidence                  799999999999999998764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.38  E-value=2.9e-12  Score=81.63  Aligned_cols=82  Identities=23%  Similarity=0.308  Sum_probs=67.1

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++|+||+++++.+.  +.+++++||+. ++|....     ......+..++.|++           
T Consensus       115 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~i  189 (353)
T PLN00034        115 VRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTH-----IADEQFLADVARQILSGIAYLHRRHI  189 (353)
T ss_pred             HHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCcccccc-----cCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            3456889999999999999999999988  88999999999 8775432     145556666666655           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+||+|||++..
T Consensus       190 vHrDlkp~NIll~~~~~~kL~DfG~~~~  217 (353)
T PLN00034        190 VHRDIKPSNLLINSAKNVKIADFGVSRI  217 (353)
T ss_pred             eecCCCHHHEEEcCCCCEEEccccccee
Confidence                   899999999999999998753

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.37  E-value=8.9e-12  Score=76.15  Aligned_cols=86  Identities=20%  Similarity=0.232  Sum_probs=72.5

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++|+|++++++.+. ...++++||++ +++.+++.... ..++...+..++.|++           
T Consensus        44 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i  123 (260)
T cd05073          44 SVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY  123 (260)
T ss_pred             HHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            3457889999999999999999999888 88899999999 99999987643 2367777777777755           


Q ss_pred             -------hcccccCCCeEEEeecCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~   96 (100)
                             +|++++..+.+|++|||.+.
T Consensus       124 ~H~dl~p~ni~i~~~~~~~l~d~~~~~  150 (260)
T cd05073         124 IHRDLRAANILVSASLVCKIADFGLAR  150 (260)
T ss_pred             cccccCcceEEEcCCCcEEECCCccee
Confidence                   89999999999999999875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.37  E-value=6.6e-12  Score=77.44  Aligned_cols=85  Identities=31%  Similarity=0.459  Sum_probs=71.6

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC---------------CCCCHHHHHHHHH
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK---------------DSMDGYSIKFSSS   73 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~---------------~~~~~~~~~~~~~   73 (100)
                      ...+.+|+..++.++|||++++++.+.  ...++++||++ ++|.+++....               ..++...+..++.
T Consensus        52 ~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  131 (283)
T cd05048          52 QQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAI  131 (283)
T ss_pred             HHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHH
Confidence            456889999999999999999999988  78899999999 99999886531               2366777777777


Q ss_pred             HhH------------------hcccccCCCeEEEeecCCCC
Q 034245           74 DSL------------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        74 ~~~------------------~nil~~~~~~~ki~dfgl~~   96 (100)
                      |++                  +|++++.++.+|++|||++.
T Consensus       132 ~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~  172 (283)
T cd05048         132 QIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSR  172 (283)
T ss_pred             HHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCccee
Confidence            755                  89999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.37  E-value=4.5e-12  Score=79.16  Aligned_cols=85  Identities=18%  Similarity=0.219  Sum_probs=73.2

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH--------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL--------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~--------------   76 (100)
                      ..+.+|+.+++.++|||++++++.+. ...++++||++ |++.+.+......++...+..++.|++              
T Consensus        54 ~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~  133 (303)
T cd05110          54 VEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHR  133 (303)
T ss_pred             HHHHHHHHHHHhCCCCCcccEEEEEcCCCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeecc
Confidence            36788999999999999999999988 66789999999 999999877654578888888877765              


Q ss_pred             ----hcccccCCCeEEEeecCCCCC
Q 034245           77 ----RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----~nil~~~~~~~ki~dfgl~~~   97 (100)
                          +|+++..++.+|++|||++..
T Consensus       134 dikp~Nill~~~~~~kL~Dfg~~~~  158 (303)
T cd05110         134 DLAARNVLVKSPNHVKITDFGLARL  158 (303)
T ss_pred             ccccceeeecCCCceEEcccccccc
Confidence                899999999999999998864

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.37  E-value=1.2e-11  Score=76.97  Aligned_cols=87  Identities=25%  Similarity=0.301  Sum_probs=72.2

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--c--------cEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH----
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--Q--------GLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL----   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~--------~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~----   76 (100)
                      ....+.+|+.++++++|||++++++++.  .        ..++++||+++++.+.+......++...+..++.|++    
T Consensus        54 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~  133 (310)
T cd07865          54 FPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLY  133 (310)
T ss_pred             chhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHH
Confidence            3445678999999999999999999876  2        3599999999888887766544588888888888866    


Q ss_pred             --------------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                    +|++++.++.+|++|||++..
T Consensus       134 ~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~  168 (310)
T cd07865         134 YIHRNKILHRDMKAANILITKDGILKLADFGLARA  168 (310)
T ss_pred             HHHHCCeeccCCCHHHEEECCCCcEEECcCCCccc
Confidence                          899999999999999998753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.37  E-value=5.7e-12  Score=86.31  Aligned_cols=85  Identities=20%  Similarity=0.174  Sum_probs=74.0

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++||||++++..+.  ...|+++||+. ++|.+++..... ++...+..++.|++            
T Consensus        48 ~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~~~-l~~~~~~~i~~qil~aL~yLH~~gIi  126 (669)
T cd05610          48 VHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGY-FDEEMAVKYISEVALALDYLHRHGII  126 (669)
T ss_pred             HHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence            356888999999999999999998887  88999999998 999999876543 78888888888765            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +||++..++.+||+|||++..
T Consensus       127 HrDLKP~NILl~~~g~vkL~DFGls~~  153 (669)
T cd05610         127 HRDLKPDNMLISNEGHIKLTDFGLSKV  153 (669)
T ss_pred             eCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence                  899999999999999999864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.37  E-value=3.6e-12  Score=79.49  Aligned_cols=84  Identities=17%  Similarity=0.277  Sum_probs=72.4

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+..++.++|||++++++.+.  +..++++||++ +++...+...  .+++..+..++.|++           
T Consensus        61 ~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~i  138 (297)
T cd06659          61 RRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQT--RLNEEQIATVCESVLQALCYLHSQGV  138 (297)
T ss_pred             hHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            3456889999999999999999999888  88999999999 8888877553  378888888887765           


Q ss_pred             -------hcccccCCCeEEEeecCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~   96 (100)
                             +|++++.++.+|++|||++.
T Consensus       139 vH~dl~p~Nill~~~~~~kL~dfg~~~  165 (297)
T cd06659         139 IHRDIKSDSILLTLDGRVKLSDFGFCA  165 (297)
T ss_pred             ecCCCCHHHeEEccCCcEEEeechhHh
Confidence                   89999999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.37  E-value=8.9e-12  Score=77.49  Aligned_cols=88  Identities=32%  Similarity=0.371  Sum_probs=73.2

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--c----------cEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--Q----------GLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~----------~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-   76 (100)
                      .....+.+|+.+++.++|||++++++.+.  .          ..++++||+++++...+......++...+..++.|++ 
T Consensus        48 ~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~  127 (302)
T cd07864          48 GFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLE  127 (302)
T ss_pred             CchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence            33456788999999999999999998876  3          6899999999877777766544588888888888865 


Q ss_pred             -----------------hcccccCCCeEEEeecCCCCC
Q 034245           77 -----------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                       +|++++.++.+|++|||++..
T Consensus       128 aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~  165 (302)
T cd07864         128 GLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARL  165 (302)
T ss_pred             HHHHHHhCCeecCCCCHHHEEECCCCcEEeCccccccc
Confidence                             899999999999999998753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.37  E-value=6.8e-12  Score=79.16  Aligned_cols=82  Identities=18%  Similarity=0.297  Sum_probs=68.0

Q ss_pred             hHHHHHH-HHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           14 SMIREVS-CLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        14 ~~~~e~~-~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      .+.+|.. +++.++|||++++++.+.  +..++++||++ +++...+..... ++...+..++.|++             
T Consensus        41 ~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~qi~~~L~~lH~~giiH  119 (325)
T cd05602          41 HIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERC-FLEPRARFYAAEIASALGYLHSLNIVY  119 (325)
T ss_pred             HHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence            3444544 467789999999999888  88999999999 999998876543 77888877777765             


Q ss_pred             -----hcccccCCCeEEEeecCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~   96 (100)
                           +||+++.++.+||+|||++.
T Consensus       120 rDlkp~Nili~~~~~~kl~DfG~a~  144 (325)
T cd05602         120 RDLKPENILLDSQGHIVLTDFGLCK  144 (325)
T ss_pred             cCCCHHHeEECCCCCEEEccCCCCc
Confidence                 89999999999999999875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.37  E-value=9e-12  Score=76.26  Aligned_cols=85  Identities=19%  Similarity=0.173  Sum_probs=71.3

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      ...+.+|+..++.++|||++++.+.+.    ..+++++||++ ++|.+++..... ++...+..++.|++          
T Consensus        48 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~l~~~l~~lH~~~  126 (265)
T cd06652          48 VNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGA-LTENVTRKYTRQILEGVSYLHSNM  126 (265)
T ss_pred             HHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHhCC
Confidence            356788999999999999999999876    45789999999 899998876543 67777777777755          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +|++++.++.++++|||++..
T Consensus       127 i~H~dl~p~nil~~~~~~~~l~Dfg~~~~  155 (265)
T cd06652         127 IVHRDIKGANILRDSVGNVKLGDFGASKR  155 (265)
T ss_pred             EecCCCCHHHEEecCCCCEEECcCccccc
Confidence                    899999999999999998753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.37  E-value=1.1e-11  Score=77.71  Aligned_cols=86  Identities=28%  Similarity=0.354  Sum_probs=69.7

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEecccccHHHHhccCC--------CCCCHHHHHHHHHHhH---
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQANDLAYLLKYPK--------DSMDGYSIKFSSSDSL---   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~~~l~~~l~~~~--------~~~~~~~~~~~~~~~~---   76 (100)
                      ...+.+|+.+++.++|||++++.+.+.    ...++++||+.+++...+....        ..++...+..++.|++   
T Consensus        42 ~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al  121 (317)
T cd07868          42 SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGI  121 (317)
T ss_pred             cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHH
Confidence            356889999999999999999999886    5688999999888887765321        2377888888888876   


Q ss_pred             ---------------hcccc----cCCCeEEEeecCCCCC
Q 034245           77 ---------------RCCLL----SFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------------~nil~----~~~~~~ki~dfgl~~~   97 (100)
                                     +||++    ...+.+|++|||++..
T Consensus       122 ~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~  161 (317)
T cd07868         122 HYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL  161 (317)
T ss_pred             HHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence                           89999    3557899999999854

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.37  E-value=6.8e-12  Score=78.43  Aligned_cols=85  Identities=25%  Similarity=0.351  Sum_probs=71.8

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC---------------CCCCHHHHHHHH
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK---------------DSMDGYSIKFSS   72 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~---------------~~~~~~~~~~~~   72 (100)
                      ...+.+|+.++.++ +|+|++++++.+.  +..|+++||++ ++|.+++....               ..++...+..++
T Consensus        51 ~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  130 (303)
T cd05088          51 HRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA  130 (303)
T ss_pred             HHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHH
Confidence            34678899999999 8999999999988  88999999999 99999886432               126777788877


Q ss_pred             HHhH------------------hcccccCCCeEEEeecCCCC
Q 034245           73 SDSL------------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        73 ~~~~------------------~nil~~~~~~~ki~dfgl~~   96 (100)
                      .|++                  +|++++.++.+|++|||++.
T Consensus       131 ~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~  172 (303)
T cd05088         131 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR  172 (303)
T ss_pred             HHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCc
Confidence            7765                  89999999999999999874

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.37  E-value=9.6e-12  Score=76.84  Aligned_cols=84  Identities=20%  Similarity=0.234  Sum_probs=70.4

Q ss_pred             hHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH-------------
Q 034245           14 SMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        14 ~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~-------------   76 (100)
                      .+.+|+.++++++|||++++.+.+.  ...++++||++ ++|...+.... .++++..+..++.|++             
T Consensus        39 ~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH  118 (277)
T cd05607          39 MALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVY  118 (277)
T ss_pred             HHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEE
Confidence            4567999999999999999999888  88999999999 99988775433 2377887777777755             


Q ss_pred             -----hcccccCCCeEEEeecCCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~~   97 (100)
                           +|++++.++.++++|||++..
T Consensus       119 ~dikp~Nili~~~~~~~l~Dfg~~~~  144 (277)
T cd05607         119 RDMKPENVLLDDQGNCRLSDLGLAVE  144 (277)
T ss_pred             ccCChHhEEEcCCCCEEEeeceeeee
Confidence                 899999999999999998753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.37  E-value=8.9e-12  Score=76.00  Aligned_cols=87  Identities=22%  Similarity=0.316  Sum_probs=74.0

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      +....+.+|+.+++.++|+|++++.+.+.  +..++++||++ ++|.+.+..... ++...+..++.|++          
T Consensus        41 ~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~i~~~i~~~l~~lh~~~  119 (264)
T cd06626          41 KTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRI-LDEHVIRVYTLQLLEGLAYLHSHG  119 (264)
T ss_pred             HHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCCcHHHHHhhcCC-CChHHHHHHHHHHHHHHHHHHHCC
Confidence            35667899999999999999999999887  88999999999 999999876543 67777777766655          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +|++++.++.+|++|||++..
T Consensus       120 i~H~dl~~~nil~~~~~~~kl~d~g~~~~  148 (264)
T cd06626         120 IVHRDIKPANIFLDHNGVIKLGDFGCAVK  148 (264)
T ss_pred             cccCCCCHHHEEECCCCCEEEcccccccc
Confidence                    899999999999999998764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.37  E-value=7.7e-12  Score=76.87  Aligned_cols=85  Identities=27%  Similarity=0.378  Sum_probs=73.8

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC--------CCCCHHHHHHHHHHhH----
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK--------DSMDGYSIKFSSSDSL----   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~--------~~~~~~~~~~~~~~~~----   76 (100)
                      ...+.+|++++++++|+|++++++.+.  ...++++||++ ++|.+++....        ..+++..+..++.|++    
T Consensus        52 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~  131 (275)
T cd05046          52 QSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMD  131 (275)
T ss_pred             HHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHH
Confidence            457899999999999999999999887  78999999999 99999987544        1378888888888765    


Q ss_pred             --------------hcccccCCCeEEEeecCCCC
Q 034245           77 --------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 --------------~nil~~~~~~~ki~dfgl~~   96 (100)
                                    +|+++..++.++++|||++.
T Consensus       132 ~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~  165 (275)
T cd05046         132 HLSNARFVHRDLAARNCLVSSQREVKVSLLSLSK  165 (275)
T ss_pred             HhhhcCcccCcCccceEEEeCCCcEEEccccccc
Confidence                          89999999999999999874

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.37  E-value=1e-11  Score=76.81  Aligned_cols=87  Identities=15%  Similarity=0.248  Sum_probs=72.4

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      +.....+.+|+.+++.++|||++++.+.+.  +..++++||++ +++...+.... .++...+..++.+++         
T Consensus        44 ~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~  122 (284)
T cd06620          44 SSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGG-PIPVEILGKIAVAVVEGLTYLYNV  122 (284)
T ss_pred             chHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHh
Confidence            334567889999999999999999999998  88999999999 89988887654 377777766665543         


Q ss_pred             ----------hcccccCCCeEEEeecCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~   96 (100)
                                +|+++..++.++++|||++.
T Consensus       123 ~~i~H~dl~p~nil~~~~~~~~l~d~gl~~  152 (284)
T cd06620         123 HRIMHRDIKPSNILVNSRGQIKLCDFGVSG  152 (284)
T ss_pred             cCeeccCCCHHHEEECCCCcEEEccCCccc
Confidence                      78899999999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.36  E-value=1.3e-11  Score=77.59  Aligned_cols=86  Identities=26%  Similarity=0.284  Sum_probs=72.8

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ...+.+|+..++.++|||++++.+.+.  ...++++||+++++.+.+.....++++..+..++.|++             
T Consensus        69 ~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H  148 (317)
T cd06635          69 WQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIH  148 (317)
T ss_pred             HHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            456889999999999999999999988  78899999999888777765555588888887777765             


Q ss_pred             -----hcccccCCCeEEEeecCCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~~   97 (100)
                           +|+++..++.+|++|||++..
T Consensus       149 ~dL~p~Nil~~~~~~~kl~dfg~~~~  174 (317)
T cd06635         149 RDIKAGNILLTEPGQVKLADFGSASI  174 (317)
T ss_pred             CCCCcccEEECCCCCEEEecCCCccc
Confidence                 899999999999999998643

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.36  E-value=9e-12  Score=77.25  Aligned_cols=85  Identities=22%  Similarity=0.334  Sum_probs=71.5

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccC---------------CCCCCHHHHHHHH
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYP---------------KDSMDGYSIKFSS   72 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~---------------~~~~~~~~~~~~~   72 (100)
                      ...+.+|+.+++++ +|+|++++++.+.  +..++++||++ ++|..++...               ...+++..+..++
T Consensus        59 ~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  138 (293)
T cd05053          59 LSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFA  138 (293)
T ss_pred             HHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHH
Confidence            34588999999999 8999999999988  88999999999 9999988532               1236777777777


Q ss_pred             HHhH------------------hcccccCCCeEEEeecCCCC
Q 034245           73 SDSL------------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        73 ~~~~------------------~nil~~~~~~~ki~dfgl~~   96 (100)
                      .|++                  +|++++.++.+|++|||++.
T Consensus       139 ~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~  180 (293)
T cd05053         139 YQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLAR  180 (293)
T ss_pred             HHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCcccccc
Confidence            7765                  89999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.36  E-value=9.8e-12  Score=75.67  Aligned_cols=86  Identities=23%  Similarity=0.325  Sum_probs=73.1

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++.+.+. ...++++||++ +++.+++.... ..++...+..++.|++            
T Consensus        43 ~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~  122 (254)
T cd05083          43 AQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLV  122 (254)
T ss_pred             HHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            457889999999999999999999888 77899999999 99999987643 2367777777777755            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +|++++.++.+|++|||++..
T Consensus       123 H~dl~p~nili~~~~~~kl~Dfg~~~~  149 (254)
T cd05083         123 HRDLAARNILVSEDGVAKVSDFGLARV  149 (254)
T ss_pred             ccccCcceEEEcCCCcEEECCCcccee
Confidence                  899999999999999998753

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.36  E-value=1.1e-11  Score=77.47  Aligned_cols=84  Identities=18%  Similarity=0.256  Sum_probs=72.1

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  +.+++++||++ ++|..++.... .+++..+..++.|++            
T Consensus        45 ~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~  123 (305)
T cd05609          45 IQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIG-ALPVDMARMYFAETVLALEYLHNYGIV  123 (305)
T ss_pred             HHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            346778999999999999999999888  77899999999 89999987654 378887777766654            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +||+++..+.+|++|||++.
T Consensus       124 H~dl~p~NIll~~~~~~~l~dfg~~~  149 (305)
T cd05609         124 HRDLKPDNLLITSMGHIKLTDFGLSK  149 (305)
T ss_pred             ccCCchHHEEECCCCCEEEeeCCCcc
Confidence                  89999999999999999874

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.36  E-value=1.5e-11  Score=74.90  Aligned_cols=86  Identities=27%  Similarity=0.354  Sum_probs=72.3

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee---ccEEEEEeccc-ccHHHHhccCCC-CCCHHHHHHHHHHhH----------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS---QGLCLFLEYQA-NDLAYLLKYPKD-SMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~---~~~~lv~e~~~-~~l~~~l~~~~~-~~~~~~~~~~~~~~~----------   76 (100)
                      ...+.+|+.+++.++|+|++++.+.+.   +..++++||++ ++|.+++..... .+++..+..++.|++          
T Consensus        43 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  122 (256)
T cd05082          43 AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN  122 (256)
T ss_pred             HHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            456889999999999999999998765   67899999999 899999876443 267777777777755          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +|++++.++.+|++|||++..
T Consensus       123 i~H~dlkp~nil~~~~~~~kl~dfg~~~~  151 (256)
T cd05082         123 FVHRDLAARNVLVSEDNVAKVSDFGLTKE  151 (256)
T ss_pred             EeccccchheEEEcCCCcEEecCCcccee
Confidence                    899999999999999998753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.36  E-value=3.1e-12  Score=79.60  Aligned_cols=88  Identities=15%  Similarity=0.120  Sum_probs=73.9

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee------ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH------
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS------QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~------~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~------   76 (100)
                      .+.++||++++-.. .|||||++.++|+      ..+.+|+|.+. |+|+..+..++ ..+++..+..+++|+.      
T Consensus        98 s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~l  177 (400)
T KOG0604|consen   98 SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYL  177 (400)
T ss_pred             CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHH
Confidence            35688999987666 7999999999988      67889999999 99999998766 3499999998888865      


Q ss_pred             ------------hccccc---CCCeEEEeecCCCCCCC
Q 034245           77 ------------RCCLLS---FGKTVKVADLQALDWPS   99 (100)
Q Consensus        77 ------------~nil~~---~~~~~ki~dfgl~~~~~   99 (100)
                                  +|++..   .+..+|++|||+|..+.
T Consensus       178 H~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~  215 (400)
T KOG0604|consen  178 HSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQ  215 (400)
T ss_pred             HhcchhhccCChhheeeecCCCCcceEecccccccccC
Confidence                        888886   45689999999998754

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.36  E-value=9e-12  Score=76.95  Aligned_cols=85  Identities=31%  Similarity=0.398  Sum_probs=70.0

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC----------------CCCCHHHHHHHHH
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK----------------DSMDGYSIKFSSS   73 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~----------------~~~~~~~~~~~~~   73 (100)
                      ..+.+|+.+++.++|||++++.+.+.  ...++++||++ ++|.+++....                ..++...+..+..
T Consensus        52 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  131 (283)
T cd05090          52 GEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAI  131 (283)
T ss_pred             HHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHH
Confidence            56889999999999999999999888  88999999999 99998874321                1256666666666


Q ss_pred             HhH------------------hcccccCCCeEEEeecCCCCC
Q 034245           74 DSL------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        74 ~~~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      |++                  +|++++.++.+|++|||++..
T Consensus       132 ~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~  173 (283)
T cd05090         132 QIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSRE  173 (283)
T ss_pred             HHHHHHHHHHhcCeehhccccceEEEcCCCcEEecccccccc
Confidence            654                  899999999999999998853

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.36  E-value=9.6e-12  Score=76.63  Aligned_cols=85  Identities=24%  Similarity=0.304  Sum_probs=69.7

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCC---------CCCHHHHHHHHHHhH---
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKD---------SMDGYSIKFSSSDSL---   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~---------~~~~~~~~~~~~~~~---   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  ...++++||++ ++|.+++.....         .++...+..++.|++   
T Consensus        53 ~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l  132 (277)
T cd05062          53 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGM  132 (277)
T ss_pred             HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHH
Confidence            345889999999999999999999988  88999999999 999998865321         135566666666654   


Q ss_pred             ---------------hcccccCCCeEEEeecCCCC
Q 034245           77 ---------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ---------------~nil~~~~~~~ki~dfgl~~   96 (100)
                                     +|++++.++.++++|||++.
T Consensus       133 ~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~  167 (277)
T cd05062         133 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR  167 (277)
T ss_pred             HHHHHCCcccCCcchheEEEcCCCCEEECCCCCcc
Confidence                           89999999999999999875

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.36  E-value=5.3e-12  Score=77.14  Aligned_cols=86  Identities=17%  Similarity=0.109  Sum_probs=71.9

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      .+.+..|+.+++.++|||++++++.+.  ...++++||++ ++|..++......+++.....++.|++            
T Consensus        43 ~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ii  122 (258)
T cd05078          43 SESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLT  122 (258)
T ss_pred             HHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            456788999999999999999999988  78899999999 999999977654578888888877766            


Q ss_pred             ------hcccccCCCe--------EEEeecCCCCC
Q 034245           77 ------RCCLLSFGKT--------VKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~--------~ki~dfgl~~~   97 (100)
                            +|++++.++.        ++++|||++..
T Consensus       123 H~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~  157 (258)
T cd05078         123 HGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT  157 (258)
T ss_pred             cCCCccceEEEecccccccCCCceEEecccccccc
Confidence                  8999976553        69999998753

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.36  E-value=1.3e-11  Score=75.74  Aligned_cols=88  Identities=25%  Similarity=0.374  Sum_probs=71.0

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--------ccEEEEEeccc-ccHHHHhccC-----CCCCCHHHHHHHHHHh
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--------QGLCLFLEYQA-NDLAYLLKYP-----KDSMDGYSIKFSSSDS   75 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--------~~~~lv~e~~~-~~l~~~l~~~-----~~~~~~~~~~~~~~~~   75 (100)
                      ...+.+.+|+.+++.++|||++++++.+.        ...++++||++ +++..++...     ...+++..+..++.|+
T Consensus        42 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i  121 (272)
T cd05075          42 SEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDI  121 (272)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHH
Confidence            34567889999999999999999998764        24689999999 9998876421     2236788887777776


Q ss_pred             H------------------hcccccCCCeEEEeecCCCCC
Q 034245           76 L------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        76 ~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      +                  +|++++.++.+|++|||++..
T Consensus       122 ~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  161 (272)
T cd05075         122 ASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKK  161 (272)
T ss_pred             HHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcccc
Confidence            5                  899999999999999999764

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.36  E-value=9.7e-12  Score=77.11  Aligned_cols=86  Identities=22%  Similarity=0.309  Sum_probs=71.1

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC-----------------------CCCCH
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK-----------------------DSMDG   65 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~-----------------------~~~~~   65 (100)
                      ...+.+|+..++.++|||++++.+.+.  +..++++||++ ++|.+++....                       .+++.
T Consensus        47 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  126 (290)
T cd05045          47 LRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTM  126 (290)
T ss_pred             HHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCH
Confidence            346889999999999999999999888  88899999999 99998875421                       12566


Q ss_pred             HHHHHHHHHhH------------------hcccccCCCeEEEeecCCCCC
Q 034245           66 YSIKFSSSDSL------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        66 ~~~~~~~~~~~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      ..+..++.|++                  +|+++..++.+|++|||++..
T Consensus       127 ~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~  176 (290)
T cd05045         127 GDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRD  176 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEecccccccc
Confidence            67777777755                  899999999999999999853

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.36  E-value=1.7e-11  Score=74.87  Aligned_cols=87  Identities=23%  Similarity=0.337  Sum_probs=73.3

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++|+|++++++.+. ...++++|+++ +++.+.+.... ..++...+..+..|++           
T Consensus        44 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i  123 (260)
T cd05067          44 SPEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNY  123 (260)
T ss_pred             cHHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCe
Confidence            3467899999999999999999999877 88999999999 99999886543 3477777777777755           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +|++++.++.++++|||++..
T Consensus       124 ~H~dl~p~ni~i~~~~~~~l~dfg~~~~  151 (260)
T cd05067         124 IHRDLRAANILVSETLCCKIADFGLARL  151 (260)
T ss_pred             ecccccHHhEEEcCCCCEEEccCcceee
Confidence                   899999999999999998753

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.36  E-value=1.1e-11  Score=76.02  Aligned_cols=84  Identities=21%  Similarity=0.246  Sum_probs=71.1

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.    ...++++|+++ ++|.+.+..... ++......+..|++          
T Consensus        48 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~-l~~~~~~~~~~qi~~~l~~LH~~~  126 (266)
T cd06651          48 VSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGA-LTESVTRKYTRQILEGMSYLHSNM  126 (266)
T ss_pred             HHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHhCC
Confidence            346888999999999999999999876    56789999999 899998876543 78888777777755          


Q ss_pred             --------hcccccCCCeEEEeecCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~   96 (100)
                              +|++++.++.+|++|||++.
T Consensus       127 i~H~~l~p~nil~~~~~~~~l~dfg~~~  154 (266)
T cd06651         127 IVHRDIKGANILRDSAGNVKLGDFGASK  154 (266)
T ss_pred             eeeCCCCHHHEEECCCCCEEEccCCCcc
Confidence                    89999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.36  E-value=1.3e-11  Score=75.17  Aligned_cols=87  Identities=18%  Similarity=0.196  Sum_probs=73.5

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~----------   76 (100)
                      ...++.+|+..+++++|||++++.+.+.  +..++++||++ +++.+.+.... ..+++..+..++.|++          
T Consensus        42 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~  121 (256)
T cd08218          42 EREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK  121 (256)
T ss_pred             HHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3457889999999999999999999988  88999999999 89998886543 2367888777777765          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +|++++.++.++++|||++..
T Consensus       122 i~h~~l~~~nil~~~~~~~~l~d~~~~~~  150 (256)
T cd08218         122 ILHRDIKSQNIFLTKDGTIKLGDFGIARV  150 (256)
T ss_pred             EecCCCCHHHEEEcCCCCEEEeeccceee
Confidence                    899999999999999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.35  E-value=7.8e-12  Score=77.68  Aligned_cols=86  Identities=28%  Similarity=0.333  Sum_probs=74.6

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ...+.+|+.+++.++|+|++++++.+.  ...++++||+.++|..++......+++..+..++.|++             
T Consensus        46 ~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H  125 (298)
T cd07841          46 NFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILH  125 (298)
T ss_pred             hHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence            345778999999999999999999998  88999999998889999876543488888888888866             


Q ss_pred             -----hcccccCCCeEEEeecCCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~~   97 (100)
                           +||+++.++.++|+|||++..
T Consensus       126 ~dl~p~nill~~~~~~~l~dfg~~~~  151 (298)
T cd07841         126 RDLKPNNLLIASDGVLKLADFGLARS  151 (298)
T ss_pred             cCCChhhEEEcCCCCEEEccceeeee
Confidence                 899999999999999998754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.35  E-value=1.1e-11  Score=76.35  Aligned_cols=85  Identities=21%  Similarity=0.332  Sum_probs=72.1

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC-------------CCCCHHHHHHHHHHh
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK-------------DSMDGYSIKFSSSDS   75 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~-------------~~~~~~~~~~~~~~~   75 (100)
                      ...+.+|+++++.++|+|++++++.+.  ...++++||++ ++|.+++....             ..+++..+..++.|+
T Consensus        52 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i  131 (280)
T cd05049          52 RKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQI  131 (280)
T ss_pred             HHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHH
Confidence            467899999999999999999999988  88999999999 99999986542             125677777777765


Q ss_pred             H------------------hcccccCCCeEEEeecCCCC
Q 034245           76 L------------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        76 ~------------------~nil~~~~~~~ki~dfgl~~   96 (100)
                      +                  +|++++.++.+|++|||++.
T Consensus       132 ~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~  170 (280)
T cd05049         132 ASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSR  170 (280)
T ss_pred             HHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccce
Confidence            5                  89999999999999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.35  E-value=4.4e-12  Score=77.17  Aligned_cols=86  Identities=21%  Similarity=0.302  Sum_probs=74.7

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+..++.++|||++++.+.+.  ...++++|+++ ++|...+.... .+++..+..++.|++           
T Consensus        36 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~i  114 (265)
T cd05579          36 QVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENVG-SLDEDVARIYIAEIVLALEYLHSNGI  114 (265)
T ss_pred             HHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCe
Confidence            3456888999999999999999998888  88999999999 89999887755 488888888888766           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +|++++.++.++++|||++..
T Consensus       115 ~H~di~~~nil~~~~~~~~l~dfg~~~~  142 (265)
T cd05579         115 IHRDLKPDNILIDSNGHLKLTDFGLSKV  142 (265)
T ss_pred             ecCCCCHHHeEEcCCCCEEEEecccchh
Confidence                   899999999999999998754

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.35  E-value=1.5e-11  Score=74.68  Aligned_cols=87  Identities=24%  Similarity=0.358  Sum_probs=75.5

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCC-CCHHHHHHHHHHhH----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDS-MDGYSIKFSSSDSL----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~-~~~~~~~~~~~~~~----------   76 (100)
                      ....+.+|+..++.++|+|++++++.+.  +..++++|+++ +++.+.+...... +++..+..++.|++          
T Consensus        44 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~  123 (258)
T smart00219       44 QIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN  123 (258)
T ss_pred             HHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            4567889999999999999999999988  88999999999 9999998765433 78888888888765          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +|++++.++.++++|||++..
T Consensus       124 ~~h~dl~~~nil~~~~~~~~l~dfg~~~~  152 (258)
T smart00219      124 FIHRDLAARNCLVGENLVVKISDFGLSRD  152 (258)
T ss_pred             eeecccccceEEEccCCeEEEcccCCcee
Confidence                    899999999999999998854

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.35  E-value=1.1e-11  Score=78.04  Aligned_cols=83  Identities=18%  Similarity=0.304  Sum_probs=70.1

Q ss_pred             hhHHHHHHHHhh-CCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           13 SSMIREVSCLME-LNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~-l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ....+|..++.. .+||+++++++.+.  +..|+++||++ ++|...+.... .++...+..++.|++            
T Consensus        40 ~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~iv  118 (316)
T cd05620          40 ECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKG-RFDLYRATFYAAEIVCGLQFLHSKGII  118 (316)
T ss_pred             HHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence            456678887765 48999999999988  88999999999 99998887654 388888888877765            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +||+++.++.+|++|||++.
T Consensus       119 HrDlkp~Nil~~~~~~~kl~Dfg~~~  144 (316)
T cd05620         119 YRDLKLDNVMLDRDGHIKIADFGMCK  144 (316)
T ss_pred             ecCCCHHHeEECCCCCEEeCccCCCe
Confidence                  89999999999999999875

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.35  E-value=9.6e-12  Score=77.46  Aligned_cols=86  Identities=24%  Similarity=0.322  Sum_probs=71.8

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC---------------CCCCHHHHHHHH
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK---------------DSMDGYSIKFSS   72 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~---------------~~~~~~~~~~~~   72 (100)
                      .+.+.+|+.++.++ +|||++++++.+.  +..++++||++ ++|.+++....               ..++...+..++
T Consensus        46 ~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  125 (297)
T cd05089          46 HRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFA  125 (297)
T ss_pred             HHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHH
Confidence            35688899999999 7999999999888  77999999999 99999886432               126777777777


Q ss_pred             HHhH------------------hcccccCCCeEEEeecCCCCC
Q 034245           73 SDSL------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        73 ~~~~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      .|++                  +|++++.++.+|++|||++..
T Consensus       126 ~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~  168 (297)
T cd05089         126 SDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRG  168 (297)
T ss_pred             HHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCcc
Confidence            7765                  899999999999999998753

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.35  E-value=1.8e-11  Score=75.09  Aligned_cols=84  Identities=20%  Similarity=0.326  Sum_probs=72.9

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      +.+.+|+.+++.++|||++++++.+.  +..++++||++ ++|.+.+.... +++...+..++.|++             
T Consensus        53 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H  131 (272)
T cd06629          53 KALRSEIETLKDLDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYG-RFEEQLVRFFTEQVLEGLAYLHSKGILH  131 (272)
T ss_pred             HHHHHHHHHHHhcCCCCcceEEEEeccCCceEEEEecCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCCeee
Confidence            45778999999999999999999888  88999999999 99999987764 488888887777765             


Q ss_pred             -----hcccccCCCeEEEeecCCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~~   97 (100)
                           +|+++..++.++++|||++..
T Consensus       132 ~dl~~~nil~~~~~~~~l~d~~~~~~  157 (272)
T cd06629         132 RDLKADNLLVDADGICKISDFGISKK  157 (272)
T ss_pred             cCCChhhEEEcCCCeEEEeecccccc
Confidence                 899999999999999998753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.35  E-value=2.8e-11  Score=72.95  Aligned_cols=88  Identities=23%  Similarity=0.313  Sum_probs=76.1

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+..++.++|++++++.+.+.  ...++++||++ ++|.+++......++...+..++.|++           
T Consensus        40 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i  119 (253)
T cd05122          40 KKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGI  119 (253)
T ss_pred             HHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCE
Confidence            4567889999999999999999999888  88999999999 999999877644488888888877765           


Q ss_pred             -------hcccccCCCeEEEeecCCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                             +|++++.++.++|+|||.+...
T Consensus       120 ~h~dl~p~ni~i~~~~~~~l~d~~~~~~~  148 (253)
T cd05122         120 IHRDIKAANILLTSDGEVKLIDFGLSAQL  148 (253)
T ss_pred             ecCCCCHHHEEEccCCeEEEeeccccccc
Confidence                   8999999999999999987654

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.35  E-value=2.2e-11  Score=76.21  Aligned_cols=86  Identities=28%  Similarity=0.347  Sum_probs=68.8

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEecccccHHHHhccC--------CCCCCHHHHHHHHHHhH---
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQANDLAYLLKYP--------KDSMDGYSIKFSSSDSL---   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~~~l~~~l~~~--------~~~~~~~~~~~~~~~~~---   76 (100)
                      ...+.+|+.+++.++|||++++.+.+.    ...++++||+++++.+.+...        ...+++..+..++.|++   
T Consensus        42 ~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL  121 (317)
T cd07867          42 SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGI  121 (317)
T ss_pred             cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHH
Confidence            346789999999999999999999885    678999999988887776422        11267777778877765   


Q ss_pred             ---------------hcccc----cCCCeEEEeecCCCCC
Q 034245           77 ---------------RCCLL----SFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------------~nil~----~~~~~~ki~dfgl~~~   97 (100)
                                     +||++    ...+.+||+|||++..
T Consensus       122 ~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~  161 (317)
T cd07867         122 HYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL  161 (317)
T ss_pred             HHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceec
Confidence                           89998    4567999999999864

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.35  E-value=9.6e-12  Score=77.15  Aligned_cols=86  Identities=29%  Similarity=0.490  Sum_probs=73.8

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC----------CCCCHHHHHHHHHHhH-
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK----------DSMDGYSIKFSSSDSL-   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~----------~~~~~~~~~~~~~~~~-   76 (100)
                      ..+.+.+|+.++++++|||++++++.+.  ...++++|+++ ++|..++....          ..++...+..++.|++ 
T Consensus        62 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  141 (296)
T cd05051          62 AREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIAS  141 (296)
T ss_pred             HHHHHHHHHHHHHhcCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHH
Confidence            3567889999999999999999999988  88999999999 99999887643          1377888888877765 


Q ss_pred             -----------------hcccccCCCeEEEeecCCCC
Q 034245           77 -----------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -----------------~nil~~~~~~~ki~dfgl~~   96 (100)
                                       +|++++.++.++++|||++.
T Consensus       142 al~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~  178 (296)
T cd05051         142 GMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSR  178 (296)
T ss_pred             HHHHHHHcCccccccchhceeecCCCceEEcccccee
Confidence                             89999999999999999875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.35  E-value=7e-12  Score=77.23  Aligned_cols=85  Identities=24%  Similarity=0.221  Sum_probs=72.9

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+..++.++|||++++.+.+.  ...++++||++ +++.+.+...  +++...+..++.|++           
T Consensus        45 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i  122 (277)
T cd06642          45 EIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKPG--PLEETYIATILREILKGLDYLHSERK  122 (277)
T ss_pred             HHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhcCCe
Confidence            3456889999999999999999999988  88999999999 8998887653  378888777777755           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +|+++..++.++++|||++..
T Consensus       123 vH~dl~p~ni~i~~~~~~~l~dfg~~~~  150 (277)
T cd06642         123 IHRDIKAANVLLSEQGDVKLADFGVAGQ  150 (277)
T ss_pred             eccCCChheEEEeCCCCEEEcccccccc
Confidence                   899999999999999998854

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.35  E-value=1.7e-11  Score=76.70  Aligned_cols=86  Identities=21%  Similarity=0.290  Sum_probs=72.0

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC---------------CCCCHHHHHHHH
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK---------------DSMDGYSIKFSS   72 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~---------------~~~~~~~~~~~~   72 (100)
                      ...+.+|+.+++.+ +|||++++.+.+.  +..++++||++ ++|.+++....               ..++...+..++
T Consensus        67 ~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  146 (307)
T cd05098          67 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCA  146 (307)
T ss_pred             HHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHH
Confidence            34688899999999 7999999999988  88999999999 99999987532               126677777777


Q ss_pred             HHhH------------------hcccccCCCeEEEeecCCCCC
Q 034245           73 SDSL------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        73 ~~~~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      .|++                  +|++++.++.+|++|||++..
T Consensus       147 ~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~  189 (307)
T cd05098         147 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD  189 (307)
T ss_pred             HHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCccccc
Confidence            7755                  899999999999999998753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.35  E-value=1.3e-11  Score=75.93  Aligned_cols=86  Identities=24%  Similarity=0.294  Sum_probs=71.6

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC---------CCCCHHHHHHHHHHhH---
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK---------DSMDGYSIKFSSSDSL---   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~---------~~~~~~~~~~~~~~~~---   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  ...++++||++ ++|.+++....         ..+++..+..++.|++   
T Consensus        53 ~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  132 (277)
T cd05032          53 RIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGM  132 (277)
T ss_pred             HHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHH
Confidence            456889999999999999999999988  88999999999 99999986432         1256667777777755   


Q ss_pred             ---------------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                     +|++++.++.+|++|||++..
T Consensus       133 ~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~  168 (277)
T cd05032         133 AYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRD  168 (277)
T ss_pred             HHHHhCCccccccChheEEEcCCCCEEECCcccchh
Confidence                           899999999999999998753

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.35  E-value=1.1e-11  Score=77.02  Aligned_cols=85  Identities=28%  Similarity=0.474  Sum_probs=70.4

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC-----------CCCCHHHHHHHHHHhH-
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK-----------DSMDGYSIKFSSSDSL-   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~-----------~~~~~~~~~~~~~~~~-   76 (100)
                      ...+.+|++++++++|+|++++++.+.  ...++++||++ ++|.+++....           ..+++..+..++.|++ 
T Consensus        61 ~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~  140 (295)
T cd05097          61 RNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIAS  140 (295)
T ss_pred             HHHHHHHHHHHHhCCCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHH
Confidence            356889999999999999999999988  88999999999 99998885432           1146666666666655 


Q ss_pred             -----------------hcccccCCCeEEEeecCCCC
Q 034245           77 -----------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -----------------~nil~~~~~~~ki~dfgl~~   96 (100)
                                       +|++++.++.+|++|||++.
T Consensus       141 al~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~  177 (295)
T cd05097         141 GMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSR  177 (295)
T ss_pred             HHHHHHhcCeeccccChhhEEEcCCCcEEeccccccc
Confidence                             89999999999999999875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.35  E-value=1.6e-11  Score=75.66  Aligned_cols=85  Identities=32%  Similarity=0.435  Sum_probs=72.9

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCC--CCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPK--DSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~--~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+.+|+.+++.++|+|++++++.+.  +..++++||+++++..++....  ..+++..+..++.|++           
T Consensus        42 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  121 (284)
T cd07836          42 PSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRV  121 (284)
T ss_pred             hHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            456788999999999999999999988  8889999999988888876543  3478888888887765           


Q ss_pred             -------hcccccCCCeEEEeecCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~   96 (100)
                             +|++++.++.++++|||++.
T Consensus       122 ~h~dl~p~ni~~~~~~~~~l~d~g~~~  148 (284)
T cd07836         122 LHRDLKPQNLLINKRGELKLADFGLAR  148 (284)
T ss_pred             eeCCCCHHHEEECCCCcEEEeecchhh
Confidence                   89999999999999999875

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.35  E-value=1.1e-11  Score=75.29  Aligned_cols=86  Identities=28%  Similarity=0.351  Sum_probs=73.3

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++|+|++++.+.+.  ...++++||++ +++.+.+.... +++...+..++.|++           
T Consensus        45 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i  123 (258)
T cd06632          45 AVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGLEYLHDRNT  123 (258)
T ss_pred             HHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            3456889999999999999999999888  88999999999 89999987654 377777777776655           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +|++++.++.+|++|||++..
T Consensus       124 ~H~dl~~~ni~~~~~~~~kl~d~~~~~~  151 (258)
T cd06632         124 VHRDIKGANILVDTNGVVKLADFGMAKQ  151 (258)
T ss_pred             ccCCCCHHHEEECCCCCEEEccCcccee
Confidence                   899999999999999998754

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.35  E-value=1.6e-11  Score=74.78  Aligned_cols=87  Identities=20%  Similarity=0.239  Sum_probs=73.3

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~----------   76 (100)
                      ..+.+.+|+.+++.++|+|++++.+.+.  +.+++++||++ +++...+.... ..++...+..++.|++          
T Consensus        41 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~  120 (255)
T cd08219          41 AVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR  120 (255)
T ss_pred             HHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            3456788999999999999999999988  88999999999 99988876532 3377888877777765          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +|++++.++.++++|||.+..
T Consensus       121 i~H~dl~p~nili~~~~~~~l~dfg~~~~  149 (255)
T cd08219         121 VLHRDIKSKNIFLTQNGKVKLGDFGSARL  149 (255)
T ss_pred             cccCCCCcceEEECCCCcEEEcccCccee
Confidence                    899999999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.34  E-value=1.3e-11  Score=78.84  Aligned_cols=84  Identities=23%  Similarity=0.283  Sum_probs=69.1

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~------   76 (100)
                      ....+.+|+.+++.++|||++++++.+.        ...++++||+++++.+.+..   .++...+..++.|++      
T Consensus        63 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~~L~~L  139 (359)
T cd07876          63 HAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHM---ELDHERMSYLLYQMLCGIKHL  139 (359)
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEEeCCCcCHHHHHhc---cCCHHHHHHHHHHHHHHHHHH
Confidence            3456889999999999999999999886        24799999999777776643   267777777777765      


Q ss_pred             ------------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                  +||+++.++.+||+|||++..
T Consensus       140 H~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~  172 (359)
T cd07876         140 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLART  172 (359)
T ss_pred             HhCCcccCCCCHHHEEECCCCCEEEecCCCccc
Confidence                        899999999999999998853

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.34  E-value=6.1e-12  Score=76.92  Aligned_cols=84  Identities=24%  Similarity=0.345  Sum_probs=72.3

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|+|++++++.+.  +..++++||++ ++|.+.++... ++++..+..++.|++            
T Consensus        47 ~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~al~~LH~~~i~  125 (268)
T cd06630          47 VEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYG-AFKEAVIINYTEQLLRGLSYLHENQII  125 (268)
T ss_pred             HHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEeccCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            457889999999999999999999988  88899999999 99999887654 488888888888866            


Q ss_pred             ------hcccccCCC-eEEEeecCCCC
Q 034245           77 ------RCCLLSFGK-TVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~-~~ki~dfgl~~   96 (100)
                            +||+++.++ .+|++|||.+.
T Consensus       126 H~~i~~~nil~~~~~~~~~l~dfg~~~  152 (268)
T cd06630         126 HRDVKGANLLIDSTGQRLRIADFGAAA  152 (268)
T ss_pred             cCCCCHHHEEEcCCCCEEEEccccccc
Confidence                  899997664 79999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.34  E-value=1.7e-11  Score=76.88  Aligned_cols=86  Identities=22%  Similarity=0.310  Sum_probs=71.1

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC---------------CCCCHHHHHHHH
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK---------------DSMDGYSIKFSS   72 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~---------------~~~~~~~~~~~~   72 (100)
                      ...+.+|+.+++.+ +|||++++++.+.  +..++++||++ ++|.+++....               ..++...+..++
T Consensus        61 ~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  140 (314)
T cd05099          61 LADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCA  140 (314)
T ss_pred             HHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHH
Confidence            34678899999999 6999999999888  77999999999 99999986532               126677777777


Q ss_pred             HHhH------------------hcccccCCCeEEEeecCCCCC
Q 034245           73 SDSL------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        73 ~~~~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      .|++                  +|++++.++.+|++|||++..
T Consensus       141 ~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~  183 (314)
T cd05099         141 YQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARG  183 (314)
T ss_pred             HHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEcccccccc
Confidence            6755                  899999999999999999853

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.34  E-value=2e-11  Score=74.79  Aligned_cols=86  Identities=20%  Similarity=0.225  Sum_probs=72.2

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      ....+.+|+.+++.++|+|++++.+.+.    ...++++|+++ ++|.+.+..... ++...+..++.|++         
T Consensus        47 ~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~-l~~~~~~~~~~~i~~al~~LH~~  125 (264)
T cd06653          47 EVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGA-LTENVTRRYTRQILQGVSYLHSN  125 (264)
T ss_pred             HHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHhC
Confidence            3456889999999999999999999876    45789999999 899988876543 78888877777765         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               +|++++.++.++++|||++..
T Consensus       126 ~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~  155 (264)
T cd06653         126 MIVHRDIKGANILRDSAGNVKLGDFGASKR  155 (264)
T ss_pred             CEecCCCCHHHEEEcCCCCEEECccccccc
Confidence                     899999999999999998853

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.34  E-value=1.3e-11  Score=76.92  Aligned_cols=84  Identities=25%  Similarity=0.316  Sum_probs=72.0

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++|||++++++.+.  ...++++||++ +++..++....  ++...+..++.|++           
T Consensus        59 ~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--l~~~~~~~i~~~l~~al~~LH~~gi  136 (293)
T cd06647          59 KKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSNQV  136 (293)
T ss_pred             HHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhhcC--CCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            3456889999999999999999999988  78999999999 99999887543  67777777777755           


Q ss_pred             -------hcccccCCCeEEEeecCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~   96 (100)
                             +|+++..++.++++|||++.
T Consensus       137 ~H~dL~p~Nili~~~~~~kL~dfg~~~  163 (293)
T cd06647         137 IHRDIKSDNILLGMDGSVKLTDFGFCA  163 (293)
T ss_pred             eeccCCHHHEEEcCCCCEEEccCccee
Confidence                   89999999999999999764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.34  E-value=5e-12  Score=78.72  Aligned_cols=84  Identities=17%  Similarity=0.236  Sum_probs=71.9

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+..++.++|+|++++.+.+.  +..++++||++ +++..++...  .++...+..++.|++           
T Consensus        62 ~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~i  139 (292)
T cd06658          62 RRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIATVCLSVLRALSYLHNQGV  139 (292)
T ss_pred             HHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            3456889999999999999999999888  88999999999 8888877543  378888888877765           


Q ss_pred             -------hcccccCCCeEEEeecCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~   96 (100)
                             +|++++.++.++++|||++.
T Consensus       140 vH~dlkp~Nill~~~~~~kL~dfg~~~  166 (292)
T cd06658         140 IHRDIKSDSILLTSDGRIKLSDFGFCA  166 (292)
T ss_pred             eecCCCHHHEEEcCCCCEEEccCcchh
Confidence                   89999999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.34  E-value=1.7e-11  Score=78.39  Aligned_cols=85  Identities=20%  Similarity=0.270  Sum_probs=69.7

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-----
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-----   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-----   76 (100)
                      .....+.+|+.+++.++|||++++++++.        ...|+++||+++++...+..   .++...+..++.|++     
T Consensus        65 ~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~aL~~  141 (364)
T cd07875          65 THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKH  141 (364)
T ss_pred             hhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEEEeCCCCCHHHHHHh---cCCHHHHHHHHHHHHHHHHH
Confidence            34456889999999999999999998875        34799999999777777643   267777777777765     


Q ss_pred             -------------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                   +||+++.++.+|++|||++..
T Consensus       142 LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~  175 (364)
T cd07875         142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART  175 (364)
T ss_pred             HhhCCeecCCCCHHHEEECCCCcEEEEeCCCccc
Confidence                         899999999999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.33  E-value=1.8e-11  Score=77.22  Aligned_cols=84  Identities=18%  Similarity=0.239  Sum_probs=70.3

Q ss_pred             hhhHHHHHHHHhhCCCC-cceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMELNHP-NIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~-~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+.+|..++..++|+ +++.+++.+.  +.+|+++||++ ++|...+..... +++..+..++.|++           
T Consensus        44 ~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~-~~~~~~~~~~~qi~~al~~lH~~~i  122 (324)
T cd05587          44 VECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGK-FKEPHAVFYAAEIAIGLFFLHSKGI  122 (324)
T ss_pred             HHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            45677899999988765 5778888877  88999999999 999988876543 88888888887765           


Q ss_pred             -------hcccccCCCeEEEeecCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~   96 (100)
                             +||+++.++.+|++|||++.
T Consensus       123 vH~dlkp~Nill~~~~~~kL~Dfg~~~  149 (324)
T cd05587         123 IYRDLKLDNVMLDAEGHIKIADFGMCK  149 (324)
T ss_pred             EecCCCHHHeEEcCCCCEEEeecCcce
Confidence                   89999999999999999874

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.33  E-value=2.5e-11  Score=74.85  Aligned_cols=83  Identities=22%  Similarity=0.239  Sum_probs=71.8

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+..++.++|||++++++.+.  ...++++||++ +++...+...  .++...+..++.|++            
T Consensus        46 ~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~--~~~~~~~~~~~~~l~~~l~~lh~~~i~  123 (277)
T cd06641          46 IEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLHSEKKI  123 (277)
T ss_pred             HHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHccCCee
Confidence            456889999999999999999999988  88999999999 8999888653  378888887777765            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +|++++.++.++++|||++.
T Consensus       124 h~dl~p~Ni~i~~~~~~~l~dfg~~~  149 (277)
T cd06641         124 HRDIKAANVLLSEHGEVKLADFGVAG  149 (277)
T ss_pred             cCCCCHHhEEECCCCCEEEeecccce
Confidence                  89999999999999999874

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.33  E-value=2.2e-11  Score=74.91  Aligned_cols=84  Identities=25%  Similarity=0.248  Sum_probs=73.4

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|+|++++.+.+.  ...++++|+++ +++...+...  +++...+..++.|++            
T Consensus        43 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~i~  120 (274)
T cd06609          43 IEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEEGKI  120 (274)
T ss_pred             HHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            456889999999999999999999888  88999999999 8999998765  478888888887765            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +|++++.++.++++|||++..
T Consensus       121 h~dl~p~ni~i~~~~~~~l~d~g~~~~  147 (274)
T cd06609         121 HRDIKAANILLSEEGDVKLADFGVSGQ  147 (274)
T ss_pred             cCCCCHHHEEECCCCCEEEccccccee
Confidence                  899999999999999998754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.33  E-value=8.1e-12  Score=77.22  Aligned_cols=86  Identities=15%  Similarity=0.157  Sum_probs=72.2

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccC--CCCCCHHHHHHHHHHhH----------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYP--KDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~~~~~~~----------   76 (100)
                      ...+.+|+..++.++|||++++++.+.  +..++++||++ +++..++...  ...+++..+..++.|++          
T Consensus        43 ~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~  122 (286)
T cd06622          43 FNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH  122 (286)
T ss_pred             HHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence            457889999999999999999999888  88999999999 8998887653  12478888777776654          


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               +|++++.++.+|++|||++..
T Consensus       123 ~i~H~dl~p~nil~~~~~~~~l~dfg~~~~  152 (286)
T cd06622         123 NIIHRDVKPTNVLVNGNGQVKLCDFGVSGN  152 (286)
T ss_pred             CEeeCCCCHHHEEECCCCCEEEeecCCccc
Confidence                     789999999999999998753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.33  E-value=1.7e-11  Score=75.57  Aligned_cols=86  Identities=19%  Similarity=0.233  Sum_probs=72.9

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+.+|+.+++.++|||++++.+.+.  +..++++||++ ++|...+.... ..++...+..++.|++           
T Consensus        37 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i  116 (277)
T cd05577          37 EQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRI  116 (277)
T ss_pred             hHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            345678999999999999999999888  88999999999 99998886544 2488888888777765           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.++++|||++..
T Consensus       117 ~H~di~p~Nil~~~~~~~~l~dfg~~~~  144 (277)
T cd05577         117 VYRDLKPENVLLDDHGNVRISDLGLAVE  144 (277)
T ss_pred             ccCCCCHHHEEECCCCCEEEccCcchhh
Confidence                   899999999999999998753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.33  E-value=1.4e-11  Score=77.79  Aligned_cols=85  Identities=20%  Similarity=0.230  Sum_probs=71.9

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~----------   76 (100)
                      ....+.+|+.+++.++||||+++++.+.  +..++++||++ +++.+++.... .++++..+..++.|++          
T Consensus        42 ~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~  121 (327)
T cd08227          42 MVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG  121 (327)
T ss_pred             HHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3456778999999999999999999998  88999999999 99999886532 3488888888888865          


Q ss_pred             --------hcccccCCCeEEEeecCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQAL   95 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~   95 (100)
                              +|++++.++.+++.||+.+
T Consensus       122 iiH~dlkp~Nil~~~~~~~~l~~~~~~  148 (327)
T cd08227         122 YVHRSVKASHILISVDGKVYLSGLRSN  148 (327)
T ss_pred             EecCCCChhhEEEecCCcEEEcccchh
Confidence                    8999999999999998753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.33  E-value=2e-11  Score=76.00  Aligned_cols=86  Identities=28%  Similarity=0.489  Sum_probs=71.3

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCC----------CCCHHHHHHHHHHhH--
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKD----------SMDGYSIKFSSSDSL--   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~----------~~~~~~~~~~~~~~~--   76 (100)
                      ...+.+|+.+++.++|+|++++++.+.  ...++++||++ ++|..++.....          .++...+..++.|++  
T Consensus        63 ~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a  142 (296)
T cd05095          63 RNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASG  142 (296)
T ss_pred             HHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHH
Confidence            456889999999999999999999888  88999999999 999998865431          145566777776654  


Q ss_pred             ----------------hcccccCCCeEEEeecCCCCC
Q 034245           77 ----------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                      +|++++.++.++++|||++..
T Consensus       143 l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~  179 (296)
T cd05095         143 MKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRN  179 (296)
T ss_pred             HHHHHHCCeecccCChheEEEcCCCCEEeccCccccc
Confidence                            899999999999999998753

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.33  E-value=2.7e-12  Score=87.34  Aligned_cols=93  Identities=19%  Similarity=0.290  Sum_probs=78.9

Q ss_pred             cCCCCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCC--CHHHHHHHHHHhH---
Q 034245            5 HNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSM--DGYSIKFSSSDSL---   76 (100)
Q Consensus         5 ~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~--~~~~~~~~~~~~~---   76 (100)
                      .+-+....+....||.+.+.++|.|||++.|.+.  +++-++||-+| |+|...++...+|+  .+..+.++.+|++   
T Consensus       609 pekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGL  688 (1226)
T KOG4279|consen  609 PEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGL  688 (1226)
T ss_pred             ccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHh
Confidence            3344445566778999999999999999999998  87889999999 99999999887777  6778888888887   


Q ss_pred             ---------------hccccc-CCCeEEEeecCCCCC
Q 034245           77 ---------------RCCLLS-FGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------------~nil~~-~~~~~ki~dfgl~~~   97 (100)
                                     +|+++. ..|.+||+|||-+..
T Consensus       689 kYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKR  725 (1226)
T KOG4279|consen  689 KYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKR  725 (1226)
T ss_pred             hhhhhcceeeccccCCcEEEeeccceEEecccccchh
Confidence                           899997 789999999997643

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.33  E-value=1e-11  Score=77.71  Aligned_cols=88  Identities=24%  Similarity=0.230  Sum_probs=74.6

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccC-CCCCCHHHHHHHHHHhH--------
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYP-KDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~~~~--------   76 (100)
                      .+....+.+|+..++.++|+|++++++.+.  ...++++||++ +++..++... ...++...+..++.|++        
T Consensus        40 ~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~  119 (314)
T cd08216          40 KEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHS  119 (314)
T ss_pred             hhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            344567899999999999999999999888  88899999999 9999988754 23478888888877765        


Q ss_pred             ----------hcccccCCCeEEEeecCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~   96 (100)
                                +|++++.++.+|++|||.+.
T Consensus       120 ~~ivH~dlk~~Nili~~~~~~kl~d~~~~~  149 (314)
T cd08216         120 KGFIHRSVKASHILLSGDGKVVLSGLRYSV  149 (314)
T ss_pred             CCeecCCCCcceEEEecCCceEEecCccce
Confidence                      89999999999999999764

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.33  E-value=2.6e-11  Score=74.03  Aligned_cols=87  Identities=22%  Similarity=0.276  Sum_probs=73.2

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccC---CCCCCHHHHHHHHHHhH-------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYP---KDSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~~~~~~~-------   76 (100)
                      .....+.+|+.++++++|++++++++.+.  +..++++||++ ++|...+...   ...++...+..++.+++       
T Consensus        44 ~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh  123 (267)
T cd08224          44 KARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH  123 (267)
T ss_pred             hhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH
Confidence            34567889999999999999999999988  88899999999 8999887542   23377888777777655       


Q ss_pred             -----------hcccccCCCeEEEeecCCCC
Q 034245           77 -----------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -----------~nil~~~~~~~ki~dfgl~~   96 (100)
                                 +|++++.++.++++|||++.
T Consensus       124 ~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~  154 (267)
T cd08224         124 SKRIMHRDIKPANVFITATGVVKLGDLGLGR  154 (267)
T ss_pred             hCCEecCCcChhhEEECCCCcEEEeccceee
Confidence                       89999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.33  E-value=1.5e-11  Score=75.27  Aligned_cols=86  Identities=24%  Similarity=0.390  Sum_probs=70.5

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--c------cEEEEEeccc-ccHHHHhccCC-----CCCCHHHHHHHHHHhH-
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--Q------GLCLFLEYQA-NDLAYLLKYPK-----DSMDGYSIKFSSSDSL-   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~------~~~lv~e~~~-~~l~~~l~~~~-----~~~~~~~~~~~~~~~~-   76 (100)
                      ...+.+|+..++.++|||++++++.+.  .      ..++++||++ +++...+....     ..++...+..++.|++ 
T Consensus        45 ~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~  124 (273)
T cd05035          45 IEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIAL  124 (273)
T ss_pred             HHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHH
Confidence            356889999999999999999999876  2      3799999999 99988874421     2377777777777765 


Q ss_pred             -----------------hcccccCCCeEEEeecCCCCC
Q 034245           77 -----------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                       +|++++.++.+|++|||++..
T Consensus       125 aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~  162 (273)
T cd05035         125 GMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKK  162 (273)
T ss_pred             HHHHHHhCCeeccccchheEEECCCCeEEECCccceee
Confidence                             899999999999999998753

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.33  E-value=9.1e-12  Score=83.01  Aligned_cols=96  Identities=25%  Similarity=0.274  Sum_probs=78.2

Q ss_pred             ccCCCCcchhhHHHHHHHHhhCC-CC-----cceeeeeeee--ccEEEEEecccccHHHHhccCC-CCCCHHHHHHHHHH
Q 034245            4 IHNTMEEVPSSMIREVSCLMELN-HP-----NIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPK-DSMDGYSIKFSSSD   74 (100)
Q Consensus         4 ~~~~~~~~~~~~~~e~~~l~~l~-h~-----~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~   74 (100)
                      +-........+..-|+.+|..++ |.     |+|++++.|.  +++|+|+|.+.-+|+++++... .+++...++.+..|
T Consensus       218 IiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Q  297 (586)
T KOG0667|consen  218 IIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQ  297 (586)
T ss_pred             eeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHH
Confidence            33334444556777999998885 33     8999999999  9999999999999999999765 34889999999999


Q ss_pred             hH------------------hcccccC--CCeEEEeecCCCCCCC
Q 034245           75 SL------------------RCCLLSF--GKTVKVADLQALDWPS   99 (100)
Q Consensus        75 ~~------------------~nil~~~--~~~~ki~dfgl~~~~~   99 (100)
                      ++                  +||++..  ...+|++|||.+|..+
T Consensus       298 il~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~  342 (586)
T KOG0667|consen  298 ILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFES  342 (586)
T ss_pred             HHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccC
Confidence            76                  9999974  3589999999998765

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.33  E-value=4.1e-12  Score=82.87  Aligned_cols=88  Identities=27%  Similarity=0.320  Sum_probs=74.5

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee---ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS---QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~---~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      .....+.||..+.+.++||.||+++++|.   ..++-|.|||+ .+|.-+++.+.- +++..++.++-|+.         
T Consensus       509 NYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhkl-mSEKEARSIiMQiVnAL~YLNEi  587 (775)
T KOG1151|consen  509 NYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKL-MSEKEARSIIMQIVNALKYLNEI  587 (775)
T ss_pred             hHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeeeeecCCCchhHHHHhhhh-hhHHHHHHHHHHHHHHHHHHhcc
Confidence            34567899999999999999999999999   78899999999 888888887764 88888888887754         


Q ss_pred             -----------hcccccC---CCeEEEeecCCCCCC
Q 034245           77 -----------RCCLLSF---GKTVKVADLQALDWP   98 (100)
Q Consensus        77 -----------~nil~~~---~~~~ki~dfgl~~~~   98 (100)
                                 .||++..   -|.+||.|||++.+-
T Consensus       588 kpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIM  623 (775)
T KOG1151|consen  588 KPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIM  623 (775)
T ss_pred             CCCeeeeccCCccEEEecCcccceeEeeecchhhhc
Confidence                       7888864   378999999998763

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.33  E-value=2.2e-11  Score=73.79  Aligned_cols=89  Identities=26%  Similarity=0.307  Sum_probs=75.9

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC---CCCCHHHHHHHHHHhH-------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK---DSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~---~~~~~~~~~~~~~~~~-------   76 (100)
                      .....+.+|+++++.++|||++++.+.+.  ...++++|+++ ++|...+....   ..++...+..++.+++       
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh  120 (258)
T cd08215          41 KEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH  120 (258)
T ss_pred             HHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH
Confidence            44567889999999999999999999888  88999999999 89999887642   4488888888887765       


Q ss_pred             -----------hcccccCCCeEEEeecCCCCCC
Q 034245           77 -----------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 -----------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                                 +|++++.++.++++|||++...
T Consensus       121 ~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~  153 (258)
T cd08215         121 SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVL  153 (258)
T ss_pred             hCCEecccCChHHeEEcCCCcEEECCccceeec
Confidence                       8999999999999999987653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.33  E-value=1.9e-11  Score=76.15  Aligned_cols=84  Identities=18%  Similarity=0.245  Sum_probs=71.7

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+..++.++|+|++++++.+.  ...++++||++ +++...+...  .+++..+..++.|++           
T Consensus        60 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~gi  137 (292)
T cd06657          60 RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLKALSVLHAQGV  137 (292)
T ss_pred             HHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            3456889999999999999999999988  88999999999 8888876543  378888888877765           


Q ss_pred             -------hcccccCCCeEEEeecCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~   96 (100)
                             +|++++.++.++++|||++.
T Consensus       138 vH~dl~p~Nilv~~~~~~~l~dfg~~~  164 (292)
T cd06657         138 IHRDIKSDSILLTHDGRVKLSDFGFCA  164 (292)
T ss_pred             ecCCCCHHHEEECCCCCEEEcccccce
Confidence                   89999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.33  E-value=2.5e-11  Score=74.89  Aligned_cols=89  Identities=37%  Similarity=0.443  Sum_probs=74.8

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCC-CCCCHHHHHHHHHHhH---------
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPK-DSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~---------   76 (100)
                      .+....+.+|+..++.++|||++++++.+.  +..++++||+++++..++.... ..+++..+..++.|++         
T Consensus        39 ~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~  118 (283)
T cd07835          39 EGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH  118 (283)
T ss_pred             ccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            334456889999999999999999999988  8899999999888888876654 2378888888877765         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               +|++++.++.++++|||++..
T Consensus       119 ~~~H~dl~p~nil~~~~~~~~l~df~~~~~  148 (283)
T cd07835         119 RVLHRDLKPQNLLIDREGALKLADFGLARA  148 (283)
T ss_pred             CeeCCCCCHHHEEEcCCCcEEEeecccccc
Confidence                     899999999999999998753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.33  E-value=2.2e-11  Score=74.49  Aligned_cols=87  Identities=23%  Similarity=0.317  Sum_probs=71.8

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccC---CCCCCHHHHHHHHHHhH--------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYP---KDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~~~~~~~--------   76 (100)
                      ....+.+|+.+++.++|||++++++.+.  +..++++||++ +++..++...   ...++...+..++.|++        
T Consensus        45 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~  124 (267)
T cd08228          45 ARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS  124 (267)
T ss_pred             HHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            3456889999999999999999999888  88899999999 8998877532   22367777777777755        


Q ss_pred             ----------hcccccCCCeEEEeecCCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                +|++++.++.++++|||++..
T Consensus       125 ~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~  155 (267)
T cd08228         125 RRVMHRDIKPANVFITATGVVKLGDLGLGRF  155 (267)
T ss_pred             CCeeCCCCCHHHEEEcCCCCEEECcccccee
Confidence                      899999999999999998654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.33  E-value=1e-11  Score=75.93  Aligned_cols=87  Identities=23%  Similarity=0.284  Sum_probs=72.4

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccC---CCCCCHHHHHHHHHHhH--------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYP---KDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~~~~~~~--------   76 (100)
                      ....+.+|+.+++.++|||++++++.+.  +..++++|+++ +++.+++...   ...+++..+..++.|++        
T Consensus        45 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~  124 (267)
T cd08229          45 ARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS  124 (267)
T ss_pred             HHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            3457889999999999999999999888  88999999999 8998887632   22378888777777765        


Q ss_pred             ----------hcccccCCCeEEEeecCCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                +|++++.++.++++|||++..
T Consensus       125 ~~i~H~dl~p~nili~~~~~~~l~dfg~~~~  155 (267)
T cd08229         125 RRVMHRDIKPANVFITATGVVKLGDLGLGRF  155 (267)
T ss_pred             CCeecCCCCHHHEEEcCCCCEEECcchhhhc
Confidence                      899999999999999998653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.32  E-value=2.8e-11  Score=74.56  Aligned_cols=89  Identities=31%  Similarity=0.451  Sum_probs=75.2

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee-c---cEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH--------
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS-Q---GLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~--------   76 (100)
                      .+....+.+|+.+++.++|+|++++.+.+. .   ..++++||+++++...+......+++..+..++.|++        
T Consensus        39 ~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~  118 (287)
T cd07840          39 EGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHS  118 (287)
T ss_pred             ccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEeccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            444567889999999999999999999988 3   7899999999888888776544588888888887765        


Q ss_pred             ----------hcccccCCCeEEEeecCCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                +|++++.++.+|++|||++..
T Consensus       119 ~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~  149 (287)
T cd07840         119 NGILHRDIKGSNILINNDGVLKLADFGLARP  149 (287)
T ss_pred             CCceeccCcHHHeEEcCCCCEEEccccceee
Confidence                      899999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.32  E-value=1.6e-12  Score=79.14  Aligned_cols=85  Identities=21%  Similarity=0.159  Sum_probs=68.5

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ..+.+.||+.+.++++||||+++++...  +..|+++|++. ++|..-+-... -+++..+-..++|++           
T Consensus        53 ~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R~-~ySEa~aSH~~rQiLeal~yCH~n~I  131 (355)
T KOG0033|consen   53 DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILEALAYCHSNGI  131 (355)
T ss_pred             cHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccchHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence            4577889999999999999999999888  89999999999 88765553332 267888888888877           


Q ss_pred             -------hcccccCC---CeEEEeecCCCC
Q 034245           77 -------RCCLLSFG---KTVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~---~~~ki~dfgl~~   96 (100)
                             .|+++.+.   ..+|++|||+|.
T Consensus       132 vHRDvkP~nllLASK~~~A~vKL~~FGvAi  161 (355)
T KOG0033|consen  132 VHRDLKPENLLLASKAKGAAVKLADFGLAI  161 (355)
T ss_pred             eeccCChhheeeeeccCCCceeecccceEE
Confidence                   67777542   478999999884

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.32  E-value=2.8e-11  Score=75.66  Aligned_cols=89  Identities=26%  Similarity=0.336  Sum_probs=72.1

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEecccccHHHHhccCC----CCCCHHHHHHHHHHhH----
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQANDLAYLLKYPK----DSMDGYSIKFSSSDSL----   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~~~l~~~l~~~~----~~~~~~~~~~~~~~~~----   76 (100)
                      .+....+.+|+.+++.++|||++++++.+.    ...++++|++++++...+....    ..++...+..++.|++    
T Consensus        43 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~  122 (316)
T cd07842          43 TGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVH  122 (316)
T ss_pred             cCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHH
Confidence            344567889999999999999999999988    5689999999877776664321    2377888888877765    


Q ss_pred             --------------hcccccC----CCeEEEeecCCCCC
Q 034245           77 --------------RCCLLSF----GKTVKVADLQALDW   97 (100)
Q Consensus        77 --------------~nil~~~----~~~~ki~dfgl~~~   97 (100)
                                    +|++++.    .+.+|++|||++..
T Consensus       123 ~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~  161 (316)
T cd07842         123 YLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARL  161 (316)
T ss_pred             HHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccc
Confidence                          8999998    89999999998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.32  E-value=1.3e-11  Score=78.73  Aligned_cols=84  Identities=21%  Similarity=0.282  Sum_probs=69.1

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~------   76 (100)
                      ....+.+|+.+++.++|||++++++.+.        ...++++||+++++.+.+..   .++...+..++.|++      
T Consensus        59 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~l~~~~~~~~~~qi~~aL~~L  135 (355)
T cd07874          59 HAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHL  135 (355)
T ss_pred             HHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEhhhhcccHHHHHhh---cCCHHHHHHHHHHHHHHHHHH
Confidence            3456788999999999999999999876        34799999999777776643   267777777777765      


Q ss_pred             ------------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                  +||+++.++.+|++|||++..
T Consensus       136 H~~givHrDikp~Nill~~~~~~kl~Dfg~~~~  168 (355)
T cd07874         136 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLART  168 (355)
T ss_pred             HhCCcccCCCChHHEEECCCCCEEEeeCccccc
Confidence                        899999999999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.32  E-value=3.7e-11  Score=75.49  Aligned_cols=86  Identities=27%  Similarity=0.292  Sum_probs=72.9

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ...+.+|+.+++.++|||++++.+.+.  ...|+++||+.+++...+.....++++..+..+..|++             
T Consensus        65 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H  144 (313)
T cd06633          65 WQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIH  144 (313)
T ss_pred             HHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence            346788999999999999999999988  78899999999888887766555578888877777755             


Q ss_pred             -----hcccccCCCeEEEeecCCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~~   97 (100)
                           +|+++..++.+|++|||++..
T Consensus       145 ~dl~p~nili~~~~~~kL~dfg~~~~  170 (313)
T cd06633         145 RDIKAGNILLTEPGQVKLADFGSASK  170 (313)
T ss_pred             CCCChhhEEECCCCCEEEeecCCCcc
Confidence                 899999999999999998754

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.32  E-value=2.6e-11  Score=74.74  Aligned_cols=84  Identities=21%  Similarity=0.263  Sum_probs=72.0

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.+.|||++++.+.+.  ...++++||++ ++|.+.+...  +++...+..++.|++            
T Consensus        46 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~--~l~~~~~~~~~~~l~~~l~~lh~~~iv  123 (277)
T cd06640          46 IEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAG--PFDEFQIATMLKEILKGLDYLHSEKKI  123 (277)
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            456889999999999999999999988  88999999999 8999988753  377777777776654            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +|++++.++.++++|||++..
T Consensus       124 H~dl~p~Nil~~~~~~~~l~dfg~~~~  150 (277)
T cd06640         124 HRDIKAANVLLSEQGDVKLADFGVAGQ  150 (277)
T ss_pred             CcCCChhhEEEcCCCCEEEccccccee
Confidence                  899999999999999998743

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.32  E-value=1.2e-11  Score=78.21  Aligned_cols=86  Identities=15%  Similarity=0.271  Sum_probs=72.6

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH--------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~--------   76 (100)
                      ....+.+|+.+++.++|||++++++.+.      ...++++||+.+++.+++.... .++...+..++.|++        
T Consensus        47 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~i~~qi~~aL~~LH~  125 (334)
T cd07855          47 LAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLMESDLHHIIHSDQ-PLTEEHIRYFLYQLLRGLKYIHS  125 (334)
T ss_pred             chHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhhhhHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            4556788999999999999999988775      4689999999988888886554 388888888887765        


Q ss_pred             ----------hcccccCCCeEEEeecCCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                +|++++.++.+|++|||++..
T Consensus       126 ~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~  156 (334)
T cd07855         126 ANVIHRDLKPSNLLVNEDCELRIGDFGMARG  156 (334)
T ss_pred             CCeecCCCCHHHEEEcCCCcEEeccccccee
Confidence                      899999999999999998753

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.32  E-value=2.6e-11  Score=74.25  Aligned_cols=87  Identities=23%  Similarity=0.304  Sum_probs=71.1

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC------CCCCHHHHHHHHHHhH-----
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK------DSMDGYSIKFSSSDSL-----   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~------~~~~~~~~~~~~~~~~-----   76 (100)
                      ....+.+|+.+++.++|||++++++.+.  ...++++||++ ++|.+++....      ..+++..+..++.|++     
T Consensus        42 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~  121 (269)
T cd05044          42 EKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVY  121 (269)
T ss_pred             hHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHH
Confidence            3457889999999999999999999988  88999999999 99999886421      2266777777776654     


Q ss_pred             -------------hcccccCCC-----eEEEeecCCCCC
Q 034245           77 -------------RCCLLSFGK-----TVKVADLQALDW   97 (100)
Q Consensus        77 -------------~nil~~~~~-----~~ki~dfgl~~~   97 (100)
                                   +|++++.++     .++++|||++..
T Consensus       122 lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~  160 (269)
T cd05044         122 LEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD  160 (269)
T ss_pred             HHhCCcccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence                         899998777     899999998753

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.31  E-value=3.4e-11  Score=74.48  Aligned_cols=86  Identities=34%  Similarity=0.401  Sum_probs=69.5

Q ss_pred             hhhHHHHHHHHhhC---CCCcceeeeeeee-------ccEEEEEecccccHHHHhccCC-CCCCHHHHHHHHHHhH----
Q 034245           12 PSSMIREVSCLMEL---NHPNIIRLMLVVS-------QGLCLFLEYQANDLAYLLKYPK-DSMDGYSIKFSSSDSL----   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l---~h~~iv~l~~~~~-------~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~----   76 (100)
                      ...+.+|+.+++.+   +|||++++++++.       ...++++|++++++..++.... ..++...+..++.|++    
T Consensus        43 ~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~  122 (288)
T cd07863          43 PLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLD  122 (288)
T ss_pred             chHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence            34567788877765   6999999999875       3478999999988888876543 2378888888888865    


Q ss_pred             --------------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                    +|++++.++.+|++|||++..
T Consensus       123 ~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~  157 (288)
T cd07863         123 FLHANCIVHRDLKPENILVTSGGQVKLADFGLARI  157 (288)
T ss_pred             HHHhCCeecCCCCHHHEEECCCCCEEECccCcccc
Confidence                          899999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.31  E-value=2.3e-11  Score=73.97  Aligned_cols=86  Identities=21%  Similarity=0.178  Sum_probs=72.2

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee---ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH---------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS---QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~---~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~---------   76 (100)
                      ....+.+|+.++++++|+|++++.+.+.   ..+++++|+++ +++.+++.... ..+++..+..++.+++         
T Consensus        42 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~  121 (257)
T cd08223          42 ERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK  121 (257)
T ss_pred             HHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            3456888999999999999999998876   46899999999 99999887643 3478888888877765         


Q ss_pred             ---------hcccccCCCeEEEeecCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~   96 (100)
                               +||+++.++.++++|||++.
T Consensus       122 ~i~H~di~p~nil~~~~~~~~l~df~~~~  150 (257)
T cd08223         122 HILHRDLKTQNVFLTRTNIIKVGDLGIAR  150 (257)
T ss_pred             CeeccCCCchhEEEecCCcEEEecccceE
Confidence                     89999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.31  E-value=2.2e-11  Score=76.97  Aligned_cols=83  Identities=19%  Similarity=0.251  Sum_probs=69.0

Q ss_pred             hHHHHHHHHhhC---CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           14 SMIREVSCLMEL---NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        14 ~~~~e~~~l~~l---~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+|..++...   +||+++++...+.  ...|+++||++ ++|...+..... +++..+..++.|++           
T Consensus        39 ~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~qil~al~~LH~~~i  117 (330)
T cd05586          39 HTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGR-FSEDRAKFYIAELVLALEHLHKYDI  117 (330)
T ss_pred             HHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCCChHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            345566666554   6999999999988  88999999999 999888876543 88888888888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+||+|||++..
T Consensus       118 vHrDlkp~Nili~~~~~~kl~Dfg~a~~  145 (330)
T cd05586         118 VYRDLKPENILLDATGHIALCDFGLSKA  145 (330)
T ss_pred             EeccCCHHHeEECCCCCEEEecCCcCcC
Confidence                   899999999999999998753

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.31  E-value=3.1e-11  Score=74.86  Aligned_cols=83  Identities=20%  Similarity=0.285  Sum_probs=72.0

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  +..++++||++ ++|.+.+...  .++...+..++.|++            
T Consensus        60 ~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~i~  137 (285)
T cd06648          60 RELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIATVCLAVLKALSFLHAQGVI  137 (285)
T ss_pred             HHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            456889999999999999999999888  88999999998 8999888763  378888888877765            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +|++++.++.++++|||++.
T Consensus       138 H~dl~p~Nil~~~~~~~~l~d~g~~~  163 (285)
T cd06648         138 HRDIKSDSILLTSDGRVKLSDFGFCA  163 (285)
T ss_pred             cCCCChhhEEEcCCCcEEEcccccch
Confidence                  89999999999999999764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.31  E-value=2.3e-11  Score=76.75  Aligned_cols=84  Identities=18%  Similarity=0.238  Sum_probs=70.3

Q ss_pred             hhhHHHHHHHHhhCC-CCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMELN-HPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~-h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+.+|..++..+. |++++++.+.+.  +..|+++||++ ++|...+..... +++..+..++.|++           
T Consensus        44 ~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~-l~~~~~~~i~~qi~~al~~lH~~~i  122 (323)
T cd05615          44 VECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK-FKEPQAVFYAAEISVGLFFLHRRGI  122 (323)
T ss_pred             HHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            345778888888875 567778888877  78999999999 999998876543 88899888888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~   96 (100)
                             +|++++.++.+||+|||++.
T Consensus       123 vHrDikp~Nill~~~~~ikL~Dfg~~~  149 (323)
T cd05615         123 IYRDLKLDNVMLDSEGHIKIADFGMCK  149 (323)
T ss_pred             eccCCCHHHeEECCCCCEEEecccccc
Confidence                   89999999999999999875

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.31  E-value=3.4e-11  Score=78.28  Aligned_cols=47  Identities=23%  Similarity=0.392  Sum_probs=42.1

Q ss_pred             hhhHHHHHHHHhhCC-CCcceeeeeeee--ccEEEEEeccc-ccHHHHhcc
Q 034245           12 PSSMIREVSCLMELN-HPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKY   58 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~-h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~   58 (100)
                      ...+.+|+.++..+. |||++++++.+.  +..++++||++ |+|.+++..
T Consensus        84 ~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~  134 (401)
T cd05107          84 KQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHR  134 (401)
T ss_pred             HHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEeccCCCcHHHHHHh
Confidence            346889999999997 999999999988  88999999999 999998854

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.31  E-value=1.2e-11  Score=75.43  Aligned_cols=86  Identities=22%  Similarity=0.310  Sum_probs=74.7

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|++.++.++|||++++++.+.  ...++++||+. ++|...+.... +++...+..++.|++           
T Consensus        43 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~i~~~l~~lh~~~i  121 (258)
T cd05578          43 SVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKV-KFSEEQVKFWICEIVLALEYLHSKGI  121 (258)
T ss_pred             HHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            3457889999999999999999998888  88999999999 99999987653 488888888877765           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +|++++.++.++++|||++..
T Consensus       122 ~h~dl~~~nil~~~~~~~~l~d~~~~~~  149 (258)
T cd05578         122 IHRDIKPDNILLDEQGHVHITDFNIATK  149 (258)
T ss_pred             eccCCCHHHeEEcCCCCEEEeecccccc
Confidence                   899999999999999998764

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.31  E-value=4.2e-11  Score=74.35  Aligned_cols=88  Identities=34%  Similarity=0.384  Sum_probs=69.8

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCC-CCCHHHHHHHHHHhH----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKD-SMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~----------   76 (100)
                      +....+.+|+..++.++|||++++++.+.  ...++++||+++++...+..... .++...+..++.|++          
T Consensus        43 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  122 (294)
T PLN00009         43 GVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR  122 (294)
T ss_pred             cchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence            33456889999999999999999999988  88999999999778777754332 256677766776655          


Q ss_pred             --------hcccccC-CCeEEEeecCCCCC
Q 034245           77 --------RCCLLSF-GKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~-~~~~ki~dfgl~~~   97 (100)
                              +|++++. ++.+|++|||++..
T Consensus       123 i~H~dl~p~nill~~~~~~~kl~dfg~~~~  152 (294)
T PLN00009        123 VLHRDLKPQNLLIDRRTNALKLADFGLARA  152 (294)
T ss_pred             eeCCCCCcceEEEECCCCEEEEcccccccc
Confidence                    8899974 56899999998753

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.31  E-value=3.3e-11  Score=74.74  Aligned_cols=85  Identities=20%  Similarity=0.252  Sum_probs=72.2

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~------------   76 (100)
                      ..+.+|+.+++.++|++++.+.+.+.  +..++++||++ +++...+.... .++++..+..++.|++            
T Consensus        45 ~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ii  124 (285)
T cd05632          45 SMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTV  124 (285)
T ss_pred             HHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            45778999999999999999998888  88999999999 88987775432 2488888888888866            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +|++++.++.+|++|||++..
T Consensus       125 H~dikp~Nili~~~~~~kl~Dfg~~~~  151 (285)
T cd05632         125 YRDLKPENILLDDYGHIRISDLGLAVK  151 (285)
T ss_pred             ecCCCHHHEEECCCCCEEEecCCccee
Confidence                  899999999999999998743

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.31  E-value=2.2e-11  Score=74.12  Aligned_cols=88  Identities=27%  Similarity=0.331  Sum_probs=70.7

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEeccc-ccHHHHhccC---CCCCCHHHHHHHHHHhH------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQA-NDLAYLLKYP---KDSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~~~~~~~------   76 (100)
                      ....+.+|+..++.++|||++++++.+.    ...++++||++ ++|...+...   ..+++...+..++.|++      
T Consensus        42 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~l  121 (265)
T cd08217          42 EKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYEC  121 (265)
T ss_pred             HHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHH
Confidence            3456888999999999999999998775    56899999999 8998888653   23477777766665543      


Q ss_pred             -----------------hcccccCCCeEEEeecCCCCCC
Q 034245           77 -----------------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 -----------------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                                       +|++++.++.+|++|||++...
T Consensus       122 H~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~  160 (265)
T cd08217         122 HNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL  160 (265)
T ss_pred             hcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence                             7889999999999999987653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.31  E-value=3.2e-11  Score=75.59  Aligned_cols=86  Identities=27%  Similarity=0.290  Sum_probs=72.2

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ..++.+|+.+++.++|+|++++.+.+.  ...++++||+.+++...+.....+++...+..++.|++             
T Consensus        59 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H  138 (308)
T cd06634          59 WQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIH  138 (308)
T ss_pred             HHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence            346788999999999999999999888  88899999999888777755444578888877777765             


Q ss_pred             -----hcccccCCCeEEEeecCCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~~   97 (100)
                           +|++++.++.++++|||++..
T Consensus       139 ~dl~p~nil~~~~~~~kl~dfg~~~~  164 (308)
T cd06634         139 RDVKAGNILLSEPGLVKLGDFGSASI  164 (308)
T ss_pred             CCCCHHhEEECCCCcEEECCccccee
Confidence                 899999999999999998753

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.30  E-value=4.6e-11  Score=74.06  Aligned_cols=87  Identities=16%  Similarity=0.188  Sum_probs=70.8

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEeccc-ccHHHHhcc---CCCCCCHHHHHHHHHHhH------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQA-NDLAYLLKY---PKDSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~-~~l~~~l~~---~~~~~~~~~~~~~~~~~~------   76 (100)
                      ....+.+|++.++.++|||++++.+.+.    +.+++++||++ ++|.+.+..   ....++...+..++.|++      
T Consensus        42 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~l  121 (287)
T cd06621          42 LQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYL  121 (287)
T ss_pred             HHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            3456889999999999999999999886    56899999999 888776542   223377777777777755      


Q ss_pred             ------------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                  +|++++.++.++++|||++..
T Consensus       122 H~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~  154 (287)
T cd06621         122 HSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGE  154 (287)
T ss_pred             HHCCcccCCCCHHHEEEecCCeEEEeecccccc
Confidence                        899999999999999998753

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.30  E-value=1.7e-11  Score=81.35  Aligned_cols=89  Identities=24%  Similarity=0.296  Sum_probs=73.2

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHH-hccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYL-LKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~-l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      .....+.|+++|.+++||.||.+.-.|+  ..+|+|||.+.|+.... +....+.+++...+++..|++           
T Consensus       606 qesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knI  685 (888)
T KOG4236|consen  606 QESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNI  685 (888)
T ss_pred             hHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcce
Confidence            3467889999999999999999999999  99999999999775555 444444488888888888876           


Q ss_pred             -------hcccccCC---CeEEEeecCCCCCCC
Q 034245           77 -------RCCLLSFG---KTVKVADLQALDWPS   99 (100)
Q Consensus        77 -------~nil~~~~---~~~ki~dfgl~~~~~   99 (100)
                             +|+++.+.   -.+|++|||+|.+.+
T Consensus       686 vHCDLKPENVLLas~~~FPQvKlCDFGfARiIg  718 (888)
T KOG4236|consen  686 VHCDLKPENVLLASASPFPQVKLCDFGFARIIG  718 (888)
T ss_pred             eeccCCchheeeccCCCCCceeeccccceeecc
Confidence                   88888643   489999999998865

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.30  E-value=2.5e-11  Score=75.19  Aligned_cols=86  Identities=28%  Similarity=0.449  Sum_probs=70.8

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC---------------------CCCCHHH
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK---------------------DSMDGYS   67 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~---------------------~~~~~~~   67 (100)
                      ...+.+|+.++++++|||++++++.+.  ...++++||++ ++|.+++....                     ..+++..
T Consensus        52 ~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  131 (288)
T cd05050          52 QADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTE  131 (288)
T ss_pred             HHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHH
Confidence            356889999999999999999999888  78899999999 99999886421                     1255666


Q ss_pred             HHHHHHHhH------------------hcccccCCCeEEEeecCCCCC
Q 034245           68 IKFSSSDSL------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        68 ~~~~~~~~~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      +..++.|++                  +|+++..++.++++|||++..
T Consensus       132 ~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~  179 (288)
T cd05050         132 QLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRN  179 (288)
T ss_pred             HHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECcccccee
Confidence            677777655                  899999999999999998753

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.30  E-value=2.4e-11  Score=74.22  Aligned_cols=87  Identities=17%  Similarity=0.255  Sum_probs=74.4

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      .....+.+|+..++.++|||++++++.+.  +..++++|+++ ++|.+.+.....+++...+..++.|++          
T Consensus        41 ~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~  120 (265)
T cd06605          41 AIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKH  120 (265)
T ss_pred             HHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCC
Confidence            33456889999999999999999999888  88999999999 999999877544578888777777755          


Q ss_pred             ---------hcccccCCCeEEEeecCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~   96 (100)
                               +|++++.++.++++|||.+.
T Consensus       121 ~i~H~dl~~~ni~~~~~~~~~l~d~g~~~  149 (265)
T cd06605         121 KIIHRDVKPSNILVNSRGQIKLCDFGVSG  149 (265)
T ss_pred             CeecCCCCHHHEEECCCCCEEEeecccch
Confidence                     89999999999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.30  E-value=2.4e-11  Score=75.86  Aligned_cols=86  Identities=21%  Similarity=0.293  Sum_probs=70.9

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC---------------CCCCHHHHHHHH
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK---------------DSMDGYSIKFSS   72 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~---------------~~~~~~~~~~~~   72 (100)
                      ...+.+|+.+++.+ +|||++++.+.+.  ...++++||++ ++|..++....               ..++...+..++
T Consensus        64 ~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (304)
T cd05101          64 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCT  143 (304)
T ss_pred             HHHHHHHHHHHHhhccCCCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHH
Confidence            35688999999999 8999999999988  88899999999 99999886532               125566666666


Q ss_pred             HHhH------------------hcccccCCCeEEEeecCCCCC
Q 034245           73 SDSL------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        73 ~~~~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      .|++                  +|++++.++.+|++|||++..
T Consensus       144 ~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~~  186 (304)
T cd05101         144 YQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD  186 (304)
T ss_pred             HHHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCcccee
Confidence            6655                  899999999999999998753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.30  E-value=3.8e-11  Score=74.16  Aligned_cols=81  Identities=14%  Similarity=0.164  Sum_probs=68.1

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.++++++|||++++++.+.  +..++++||++ +++....     .+++..+..++.|++            
T Consensus        43 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~  117 (279)
T cd06619          43 QKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLWSLKIL  117 (279)
T ss_pred             HHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence            456889999999999999999999988  88899999999 7775432     267777777777765            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +|++++.++.++++|||++..
T Consensus       118 H~dlkp~Nill~~~~~~~l~dfg~~~~  144 (279)
T cd06619         118 HRDVKPSNMLVNTRGQVKLCDFGVSTQ  144 (279)
T ss_pred             eCCCCHHHEEECCCCCEEEeeCCccee
Confidence                  899999999999999998753

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.30  E-value=3.2e-11  Score=76.02  Aligned_cols=83  Identities=18%  Similarity=0.241  Sum_probs=69.9

Q ss_pred             hhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           13 SSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ..+.+|..++... +|++++.+.+.+.  +..++++||++ ++|...+..... ++...+..++.|++            
T Consensus        45 ~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~-~~~~~~~~~~~qi~~aL~~LH~~~iv  123 (323)
T cd05616          45 ECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGR-FKEPHAVFYAAEIAIGLFFLHSKGII  123 (323)
T ss_pred             HHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence            3466788877776 6889999998888  88999999999 999988876543 88888888888765            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +||+++.++.+|++|||++.
T Consensus       124 HrDlkp~Nill~~~~~~kL~DfG~~~  149 (323)
T cd05616         124 YRDLKLDNVMLDSEGHIKIADFGMCK  149 (323)
T ss_pred             ecCCCHHHeEECCCCcEEEccCCCce
Confidence                  89999999999999999875

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.30  E-value=3.6e-11  Score=74.53  Aligned_cols=85  Identities=18%  Similarity=0.213  Sum_probs=71.7

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+.+|+.++..+ +|++++.+.+.+.  ...++++||++ ++|.+.+.... +++...+..++.|++           
T Consensus        48 ~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH~~~i  126 (290)
T cd05613          48 TEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRE-RFKEQEVQIYSGEIVLALEHLHKLGI  126 (290)
T ss_pred             HHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            34577899999999 6999999998888  77899999999 99999887654 378888777776655           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +|++++.++.+|++|||++..
T Consensus       127 ~H~dl~p~nil~~~~~~~kl~dfg~~~~  154 (290)
T cd05613         127 IYRDIKLENILLDSNGHVVLTDFGLSKE  154 (290)
T ss_pred             eccCCCHHHeEECCCCCEEEeeCcccee
Confidence                   899999999999999998754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.30  E-value=3.9e-11  Score=74.41  Aligned_cols=84  Identities=23%  Similarity=0.302  Sum_probs=68.9

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC---------CCCCHHHHHHHHHHhH----
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK---------DSMDGYSIKFSSSDSL----   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~---------~~~~~~~~~~~~~~~~----   76 (100)
                      ..+.+|+..++.++|||++++++.+.  ...++++||++ ++|.+++....         ..++...+..++.|++    
T Consensus        54 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  133 (288)
T cd05061          54 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA  133 (288)
T ss_pred             HHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHH
Confidence            45788999999999999999999888  88899999999 99999986432         1134556666666654    


Q ss_pred             --------------hcccccCCCeEEEeecCCCC
Q 034245           77 --------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 --------------~nil~~~~~~~ki~dfgl~~   96 (100)
                                    +|++++.++.++++|||++.
T Consensus       134 ~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~  167 (288)
T cd05061         134 YLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR  167 (288)
T ss_pred             HHHhCCCcCCCCChheEEEcCCCcEEECcCCccc
Confidence                          89999999999999999875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.30  E-value=1.3e-11  Score=76.10  Aligned_cols=86  Identities=28%  Similarity=0.364  Sum_probs=71.9

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++|||++++.+.+.  ...++++||++ +.+........ .+++..+..++.|++           
T Consensus        43 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i  121 (286)
T cd07846          43 VKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPN-GLDESRVRKYLFQILRGIEFCHSHNI  121 (286)
T ss_pred             hhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCccHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            3456889999999999999999999998  88999999999 76766655433 378888888877765           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +|++++.++.++++|||++..
T Consensus       122 ~h~~l~p~ni~~~~~~~~~l~dfg~~~~  149 (286)
T cd07846         122 IHRDIKPENILVSQSGVVKLCDFGFART  149 (286)
T ss_pred             cccCCCHHHEEECCCCcEEEEeeeeeee
Confidence                   899999999999999998753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.30  E-value=2.2e-11  Score=81.09  Aligned_cols=86  Identities=15%  Similarity=0.111  Sum_probs=67.9

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCC----CCCCHHHHHHHHHHhH---------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPK----DSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~----~~~~~~~~~~~~~~~~---------   76 (100)
                      ...+.+|+.+++.++||||+++++++.  ...|++++++.+++..++....    .......+..++.|++         
T Consensus       207 ~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~  286 (501)
T PHA03210        207 AIQLENEILALGRLNHENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK  286 (501)
T ss_pred             HHHHHHHHHHHHhCCCCCcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC
Confidence            345789999999999999999999998  8889999998877777764322    1123445556666655         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               +||+++.++.+||+|||++..
T Consensus       287 gIiHrDLKP~NILl~~~~~vkL~DFGla~~  316 (501)
T PHA03210        287 KLIHRDIKLENIFLNCDGKIVLGDFGTAMP  316 (501)
T ss_pred             CeecCCCCHHHEEECCCCCEEEEeCCCcee
Confidence                     899999999999999999853

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.30  E-value=3.8e-11  Score=75.90  Aligned_cols=83  Identities=20%  Similarity=0.248  Sum_probs=72.5

Q ss_pred             hHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH---------------
Q 034245           14 SMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL---------------   76 (100)
Q Consensus        14 ~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~---------------   76 (100)
                      .+.+|+.+++.++|+|++++.+.+.  ...++++|++.+++.+.+..... ++......++.|++               
T Consensus        66 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~-~~~~~~~~~~~ql~~aL~~LH~~~i~H~d  144 (335)
T PTZ00024         66 TTLRELKIMNEIKHENIMGLVDVYVEGDFINLVMDIMASDLKKVVDRKIR-LTESQVKCILLQILNGLNVLHKWYFMHRD  144 (335)
T ss_pred             hHHHHHHHHHhCCCcceeeeeEEEecCCcEEEEEeccccCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence            4779999999999999999999988  88999999999989888876543 78888888888765               


Q ss_pred             ---hcccccCCCeEEEeecCCCCC
Q 034245           77 ---RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---~nil~~~~~~~ki~dfgl~~~   97 (100)
                         +|++++.++.++++|||++..
T Consensus       145 l~~~nill~~~~~~kl~dfg~~~~  168 (335)
T PTZ00024        145 LSPANIFINSKGICKIADFGLARR  168 (335)
T ss_pred             ccHHHeEECCCCCEEECCccceee
Confidence               899999999999999998754

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.30  E-value=5.8e-11  Score=72.82  Aligned_cols=86  Identities=21%  Similarity=0.290  Sum_probs=71.4

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--------ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH----
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--------QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL----   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--------~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~----   76 (100)
                      ...+.+|+.++..+ +|+|++++.+.+.        ...++++||++ +++.+.+.... ..+++..+..++.|++    
T Consensus        46 ~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~  125 (272)
T cd06637          46 EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLS  125 (272)
T ss_pred             HHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHH
Confidence            45688899999998 7999999999886        24789999999 89999887643 3478888877777755    


Q ss_pred             --------------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                    +|++++.++.+|++|||++..
T Consensus       126 ~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~  160 (272)
T cd06637         126 HLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ  160 (272)
T ss_pred             HHHHCCCccCCCCHHHEEECCCCCEEEccCCCcee
Confidence                          899999999999999999753

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.29  E-value=4.9e-11  Score=73.80  Aligned_cols=86  Identities=23%  Similarity=0.291  Sum_probs=74.6

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      .+.+.+|+..++.++|+|++++++.+.  ...++++||++ ++|.+++......++...+..++.|++            
T Consensus        59 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~  138 (286)
T cd06614          59 KELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVI  138 (286)
T ss_pred             HHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            456889999999999999999999988  88999999999 999999987653488888877777755            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +|++++.++.++++|||++..
T Consensus       139 H~dl~p~ni~i~~~~~~~l~d~~~~~~  165 (286)
T cd06614         139 HRDIKSDNILLSKDGSVKLADFGFAAQ  165 (286)
T ss_pred             eCCCChhhEEEcCCCCEEECccchhhh
Confidence                  899999999999999997653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.28  E-value=2.2e-11  Score=74.96  Aligned_cols=86  Identities=33%  Similarity=0.439  Sum_probs=74.1

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ....+.+|+..++.++|+|++++++.+.  ...++++||+++++.+.+.....+++...+..++.|++            
T Consensus        41 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~  120 (283)
T cd05118          41 IPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGIL  120 (283)
T ss_pred             hHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            3456888999999999999999999888  88999999999888888876544588888888887766            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +|++++.++.++++|||.+.
T Consensus       121 H~dl~p~nili~~~~~~~l~df~~~~  146 (283)
T cd05118         121 HRDLKPENLLINTEGVLKLADFGLAR  146 (283)
T ss_pred             ecCcCHHHEEECCCCcEEEeeeeeeE
Confidence                  89999999999999999764

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.28  E-value=3.8e-11  Score=84.71  Aligned_cols=89  Identities=24%  Similarity=0.273  Sum_probs=69.9

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEeccc-ccHHHHhccC---CCCCCHHHHHHHHHHhH----
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQA-NDLAYLLKYP---KDSMDGYSIKFSSSDSL----   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~~~~~~~----   76 (100)
                      ......+.+|+.+++.++||||+++++.|.    ..+|+++||++ ++|...+...   ...+++..+..++.|++    
T Consensus        53 e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALa  132 (1021)
T PTZ00266         53 EREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALA  132 (1021)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHH
Confidence            334567889999999999999999999886    56899999999 9999988652   23478888877776654    


Q ss_pred             ---------------------hcccccC-----------------CCeEEEeecCCCCC
Q 034245           77 ---------------------RCCLLSF-----------------GKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------------------~nil~~~-----------------~~~~ki~dfgl~~~   97 (100)
                                           +||++..                 .+.+||+|||++..
T Consensus       133 YLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~  191 (1021)
T PTZ00266        133 YCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKN  191 (1021)
T ss_pred             HHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccc
Confidence                                 5777753                 23489999998754

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.28  E-value=4.3e-11  Score=75.75  Aligned_cols=86  Identities=20%  Similarity=0.288  Sum_probs=70.8

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC---------------CCCCHHHHHHHH
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK---------------DSMDGYSIKFSS   72 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~---------------~~~~~~~~~~~~   72 (100)
                      ...+.+|+.+++++ +|||++++++.+.  +..++++||++ ++|.+++....               ..++...+..++
T Consensus        61 ~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  140 (334)
T cd05100          61 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCA  140 (334)
T ss_pred             HHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHH
Confidence            45688999999999 8999999999988  78999999999 99999886432               125566666666


Q ss_pred             HHhH------------------hcccccCCCeEEEeecCCCCC
Q 034245           73 SDSL------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        73 ~~~~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      .|++                  +|++++.++.+|++|||++..
T Consensus       141 ~qi~~al~~LH~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~  183 (334)
T cd05100         141 YQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARD  183 (334)
T ss_pred             HHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCccccee
Confidence            6655                  899999999999999998753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.28  E-value=4.1e-11  Score=75.94  Aligned_cols=85  Identities=18%  Similarity=0.292  Sum_probs=72.2

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee-------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH--------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS-------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~-------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~--------   76 (100)
                      ...+.+|+.+++.++|+|++++.+.+.       ...++++||+.+++.+.+.... .++...+..++.|++        
T Consensus        48 ~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~  126 (337)
T cd07858          48 AKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMDTDLHQIIRSSQ-TLSDDHCQYFLYQLLRGLKYIHS  126 (337)
T ss_pred             hHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeCCCCCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            456778999999999999999998775       2479999999988888887654 388888888888766        


Q ss_pred             ----------hcccccCCCeEEEeecCCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                +|++++.++.+|++|||++..
T Consensus       127 ~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~  157 (337)
T cd07858         127 ANVLHRDLKPSNLLLNANCDLKICDFGLART  157 (337)
T ss_pred             CCEecCCCCHHHEEEcCCCCEEECcCccccc
Confidence                      899999999999999998864

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.28  E-value=5.3e-11  Score=73.85  Aligned_cols=85  Identities=19%  Similarity=0.244  Sum_probs=71.6

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~------------   76 (100)
                      ..+.+|+.+++.++|++++.+.+.+.  +..++++||++ ++|.+.+.... .+++...+..++.|++            
T Consensus        45 ~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ii  124 (285)
T cd05630          45 SMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIV  124 (285)
T ss_pred             HHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence            34678999999999999999999888  88999999999 99988875432 2378888888877765            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +|++++.++.++++|||++..
T Consensus       125 H~dikp~Nil~~~~~~~~l~Dfg~~~~  151 (285)
T cd05630         125 YRDLKPENILLDDHGHIRISDLGLAVH  151 (285)
T ss_pred             eCCCCHHHEEECCCCCEEEeeccceee
Confidence                  899999999999999998753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.27  E-value=7.2e-11  Score=72.63  Aligned_cols=86  Identities=23%  Similarity=0.274  Sum_probs=72.5

Q ss_pred             cchhhHHHHHHHHhhCC---CCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------
Q 034245           10 EVPSSMIREVSCLMELN---HPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~---h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------   76 (100)
                      .....+.+|+.+++.++   |||++++.+.+.  ...++++||++ ++|.+.+...  .+++..+..++.|++       
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh  118 (277)
T cd06917          41 DDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIH  118 (277)
T ss_pred             hhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHH
Confidence            34566889999999986   999999999888  78899999999 8998887654  478888877777755       


Q ss_pred             -----------hcccccCCCeEEEeecCCCCC
Q 034245           77 -----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                 +|++++..+.++++|||++..
T Consensus       119 ~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~  150 (277)
T cd06917         119 KVGVIHRDIKAANILVTNTGNVKLCDFGVAAL  150 (277)
T ss_pred             hCCcccCCcCHHHEEEcCCCCEEEccCCceee
Confidence                       899999999999999998753

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.27  E-value=8.9e-11  Score=71.52  Aligned_cols=86  Identities=21%  Similarity=0.278  Sum_probs=74.5

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+..+..++|+|++++++.+.  ...++++||++ ++|...+.... +++...+..++.|++           
T Consensus        42 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~l~~~l~~lh~~~~  120 (264)
T cd06623          42 FRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVG-KIPEPVLAYIARQILKGLDYLHTKRH  120 (264)
T ss_pred             HHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHhccCC
Confidence            4567899999999999999999999988  88999999999 99999987653 478888777777655           


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +|++++.++.++++|||.+..
T Consensus       121 ~~H~~l~~~ni~~~~~~~~~l~df~~~~~  149 (264)
T cd06623         121 IIHRDIKPSNLLINSKGEVKIADFGISKV  149 (264)
T ss_pred             CccCCCCHHHEEECCCCCEEEccCcccee
Confidence                    899999999999999998764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.27  E-value=6.3e-11  Score=74.28  Aligned_cols=86  Identities=21%  Similarity=0.325  Sum_probs=73.2

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+.+|+.+++.++|+|++++++.+.  ...++++||+. ++|.+++.... ..+++..+..++.|++           
T Consensus        45 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i  124 (316)
T cd05574          45 VKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGI  124 (316)
T ss_pred             HHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            346888999999999999999999988  88999999999 89999887543 3478888877777765           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +|++++.++.++++|||++..
T Consensus       125 ~H~dlkp~Nili~~~~~~~l~dfg~~~~  152 (316)
T cd05574         125 VYRDLKPENILLHESGHIMLSDFDLSKQ  152 (316)
T ss_pred             eccCCChHHeEEcCCCCEEEeecchhhc
Confidence                   899999999999999998753

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.27  E-value=6.6e-11  Score=73.38  Aligned_cols=87  Identities=28%  Similarity=0.316  Sum_probs=70.5

Q ss_pred             chhhHHHHHHHHhhC-CCCcceeeeeeee--cc-----EEEEEecccccHHHHhccCC----CCCCHHHHHHHHHHhH--
Q 034245           11 VPSSMIREVSCLMEL-NHPNIIRLMLVVS--QG-----LCLFLEYQANDLAYLLKYPK----DSMDGYSIKFSSSDSL--   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~-----~~lv~e~~~~~l~~~l~~~~----~~~~~~~~~~~~~~~~--   76 (100)
                      ....+.+|+.+++.+ +|||++++++.+.  ..     .|+++||+++++.+.+....    ..+++..+..++.|++  
T Consensus        43 ~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~  122 (295)
T cd07837          43 IPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKG  122 (295)
T ss_pred             CchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHH
Confidence            345688999999999 5699999999887  33     79999999988888775432    2378888888888765  


Q ss_pred             ----------------hcccccC-CCeEEEeecCCCCC
Q 034245           77 ----------------RCCLLSF-GKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------------~nil~~~-~~~~ki~dfgl~~~   97 (100)
                                      +|++++. ++.+|++|||++..
T Consensus       123 L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~  160 (295)
T cd07837         123 VAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRA  160 (295)
T ss_pred             HHHHHHCCeeecCCChHHEEEecCCCeEEEeeccccee
Confidence                            8999997 89999999998753

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.27  E-value=7.5e-11  Score=72.85  Aligned_cols=84  Identities=24%  Similarity=0.312  Sum_probs=68.2

Q ss_pred             hhHHHHHHHHhhC-CCCcceeeeeeee-------ccEEEEEeccc-ccHHHHhcc---CCCCCCHHHHHHHHHHhH----
Q 034245           13 SSMIREVSCLMEL-NHPNIIRLMLVVS-------QGLCLFLEYQA-NDLAYLLKY---PKDSMDGYSIKFSSSDSL----   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l-~h~~iv~l~~~~~-------~~~~lv~e~~~-~~l~~~l~~---~~~~~~~~~~~~~~~~~~----   76 (100)
                      ..+.+|+.+++.+ +|||++++++.+.       +..++++||++ ++|.+.+..   ....+++..+..++.|++    
T Consensus        59 ~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~  138 (286)
T cd06638          59 EEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQ  138 (286)
T ss_pred             HHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHH
Confidence            5577899999998 7999999999873       56899999999 999887653   223377777777776654    


Q ss_pred             --------------hcccccCCCeEEEeecCCCC
Q 034245           77 --------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 --------------~nil~~~~~~~ki~dfgl~~   96 (100)
                                    +|++++.++.+|++|||++.
T Consensus       139 ~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~  172 (286)
T cd06638         139 HLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSA  172 (286)
T ss_pred             HHHhCCccccCCCHHhEEECCCCCEEEccCCcee
Confidence                          89999999999999999874

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.27  E-value=8.3e-11  Score=71.23  Aligned_cols=87  Identities=23%  Similarity=0.311  Sum_probs=74.6

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+..++.++|||++++.+.+.  +..++++|+++ ++|.+.+.... .+++..+..++.|++           
T Consensus        42 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~~l~~lH~~~i  120 (254)
T cd06627          42 ALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFG-PFPESLVAVYVYQVLQGLAYLHEQGV  120 (254)
T ss_pred             HHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHhhCCc
Confidence            4567889999999999999999999888  88999999999 89999887654 488888888877765           


Q ss_pred             -------hcccccCCCeEEEeecCCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                             +|++++.++.++++|||++...
T Consensus       121 ~H~dl~p~ni~i~~~~~~~l~d~~~~~~~  149 (254)
T cd06627         121 IHRDIKAANILTTKDGVVKLADFGVATKL  149 (254)
T ss_pred             ccCCCCHHHEEECCCCCEEEeccccceec
Confidence                   8999999999999999987643

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.26  E-value=7.9e-11  Score=72.07  Aligned_cols=85  Identities=22%  Similarity=0.261  Sum_probs=70.4

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--c------cEEEEEeccc-ccHHHHhccC---CCCCCHHHHHHHHHHhH--
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--Q------GLCLFLEYQA-NDLAYLLKYP---KDSMDGYSIKFSSSDSL--   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~------~~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~~~~~~~--   76 (100)
                      ...+.+|+.+++.+ +|+|++++++.+.  .      ..++++||++ ++|.+.+...   ...++...+..++.|++  
T Consensus        46 ~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~a  125 (275)
T cd06608          46 EEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRG  125 (275)
T ss_pred             HHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHH
Confidence            35688999999998 7999999999986  3      3799999999 8888877542   23478888888877765  


Q ss_pred             ----------------hcccccCCCeEEEeecCCCC
Q 034245           77 ----------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ----------------~nil~~~~~~~ki~dfgl~~   96 (100)
                                      +|++++.++.+|++|||++.
T Consensus       126 l~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~  161 (275)
T cd06608         126 LAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSA  161 (275)
T ss_pred             HHHHhcCCcccCCCCHHHEEEccCCeEEECCCccce
Confidence                            89999999999999999874

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.26  E-value=5.9e-11  Score=83.26  Aligned_cols=86  Identities=20%  Similarity=0.166  Sum_probs=69.8

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC----------CCCCHHHHHHHHHHhH--
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK----------DSMDGYSIKFSSSDSL--   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~----------~~~~~~~~~~~~~~~~--   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  +..++++||++ ++|.+.+....          .+.+...+..++.|++  
T Consensus        46 ~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~A  125 (932)
T PRK13184         46 KKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICAT  125 (932)
T ss_pred             HHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHH
Confidence            456889999999999999999999988  88999999999 99988875321          1134455555666654  


Q ss_pred             ----------------hcccccCCCeEEEeecCCCCC
Q 034245           77 ----------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                      +||+++.++.+|++|||++..
T Consensus       126 L~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~  162 (932)
T PRK13184        126 IEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIF  162 (932)
T ss_pred             HHHHHHCCccccCCchheEEEcCCCCEEEEecCccee
Confidence                            899999999999999999864

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.26  E-value=3.6e-11  Score=73.94  Aligned_cols=89  Identities=33%  Similarity=0.427  Sum_probs=75.6

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      +...+.+.+|+.+++.++|+|++++.+.+.  ...++++|++++++.+.+......++...+..++.|++          
T Consensus        39 ~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~  118 (282)
T cd07829          39 EGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHR  118 (282)
T ss_pred             ccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            344567888999999999999999999988  88999999999889999877633488888888877765          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +|++++.++.++++|||++..
T Consensus       119 i~H~~l~~~ni~~~~~~~~~l~d~g~~~~  147 (282)
T cd07829         119 ILHRDLKPQNILINRDGVLKLADFGLARA  147 (282)
T ss_pred             cccCCCChheEEEcCCCCEEEecCCcccc
Confidence                    899999999999999998753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.26  E-value=2.4e-11  Score=77.09  Aligned_cols=83  Identities=18%  Similarity=0.256  Sum_probs=69.8

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH--------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~--------   76 (100)
                      ..+.+|+.+++.++|||++++++++.        ...+++++++.+++...+...  .++...+..++.|++        
T Consensus        59 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~  136 (343)
T cd07878          59 RRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLMGADLNNIVKCQ--KLSDEHVQFLIYQLLRGLKYIHS  136 (343)
T ss_pred             HHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEeecCCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence            45778999999999999999988764        346899998888888877643  388888888888866        


Q ss_pred             ----------hcccccCCCeEEEeecCCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                +||+++.++.+|++|||++..
T Consensus       137 ~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~  167 (343)
T cd07878         137 AGIIHRDLKPSNVAVNEDCELRILDFGLARQ  167 (343)
T ss_pred             CCeecccCChhhEEECCCCCEEEcCCcccee
Confidence                      899999999999999998754

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.26  E-value=1.1e-10  Score=70.86  Aligned_cols=88  Identities=24%  Similarity=0.243  Sum_probs=72.2

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH---------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~---------   76 (100)
                      .....+.+|+.+++.++|||++++++.+.  +..++++|+++ ++|.+++.... ..++...+..++.+++         
T Consensus        41 ~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~  120 (256)
T cd08220          41 DERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK  120 (256)
T ss_pred             HHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            34567889999999999999999999887  88999999999 89999987643 3377888777777755         


Q ss_pred             ---------hcccccC-CCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSF-GKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~-~~~~ki~dfgl~~~   97 (100)
                               +|++++. ++.+|++|||++..
T Consensus       121 ~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~  151 (256)
T cd08220         121 LILHRDLKTQNILLDKHKMVVKIGDFGISKI  151 (256)
T ss_pred             CeecCCCCHHHEEEcCCCCEEEEccCCCcee
Confidence                     8999975 45789999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.25  E-value=9.3e-11  Score=72.30  Aligned_cols=86  Identities=17%  Similarity=0.280  Sum_probs=72.1

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee---ccEEEEEeccc-ccHHHHhccCC-------CCCCHHHHHHHHHHhH---
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS---QGLCLFLEYQA-NDLAYLLKYPK-------DSMDGYSIKFSSSDSL---   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~---~~~~lv~e~~~-~~l~~~l~~~~-------~~~~~~~~~~~~~~~~---   76 (100)
                      ....+.+|+..+++++|||++++++.+.   ...++++++++ +++..++....       ..+++..+..++.|++   
T Consensus        51 ~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l  130 (280)
T cd05043          51 QVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGM  130 (280)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHH
Confidence            3456889999999999999999999876   67889999999 99999886532       2377888887777765   


Q ss_pred             ---------------hcccccCCCeEEEeecCCCC
Q 034245           77 ---------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ---------------~nil~~~~~~~ki~dfgl~~   96 (100)
                                     +|+++..++.+|++|||++.
T Consensus       131 ~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~  165 (280)
T cd05043         131 SYLHKRGVIHKDIAARNCVIDEELQVKITDNALSR  165 (280)
T ss_pred             HHHHHCCEeecccCHhhEEEcCCCcEEECCCCCcc
Confidence                           89999999999999999975

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.25  E-value=1.6e-10  Score=73.10  Aligned_cols=85  Identities=22%  Similarity=0.270  Sum_probs=70.1

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee---ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS---QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~---~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++|||++++.+.+.   ...++++|++++++...++..  +++...+..++.|++           
T Consensus        52 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~aL~~LH~~~i  129 (328)
T cd07856          52 LAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELLGTDLHRLLTSR--PLEKQFIQYFLYQILRGLKYVHSAGV  129 (328)
T ss_pred             hhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehhccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            3466889999999999999999999886   568999999888888877653  367777776766654           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +|++++.++.++++|||.+..
T Consensus       130 iH~dl~p~Nili~~~~~~~l~dfg~~~~  157 (328)
T cd07856         130 VHRDLKPSNILINENCDLKICDFGLARI  157 (328)
T ss_pred             ccCCCCHHHEeECCCCCEEeCccccccc
Confidence                   899999999999999998753

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.25  E-value=1.5e-11  Score=74.65  Aligned_cols=95  Identities=20%  Similarity=0.147  Sum_probs=78.7

Q ss_pred             eccCCCCcchhhHHHHHHHHhhCCCCcceeeeeeee-------ccEEEEEeccc-ccHHHHhccC---CCCCCHHHHHHH
Q 034245            3 EIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVS-------QGLCLFLEYQA-NDLAYLLKYP---KDSMDGYSIKFS   71 (100)
Q Consensus         3 ~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-------~~~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~~   71 (100)
                      |+-....+..+.++||+...++++|||++++.+...       ...|++++|.. |++.+.+...   +..+++.++..+
T Consensus        53 kI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~i  132 (302)
T KOG2345|consen   53 KILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWI  132 (302)
T ss_pred             eeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHH
Confidence            444445566788999999999999999999987765       55899999999 9999888653   223899999999


Q ss_pred             HHHhH--------------------hcccccCCCeEEEeecCCCCC
Q 034245           72 SSDSL--------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        72 ~~~~~--------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      +.+++                    .||+++..+.+++.|||-++.
T Consensus       133 f~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~  178 (302)
T KOG2345|consen  133 FLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQ  178 (302)
T ss_pred             HHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccc
Confidence            88876                    899999999999999997753

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.24  E-value=1.5e-10  Score=70.92  Aligned_cols=86  Identities=19%  Similarity=0.230  Sum_probs=69.2

Q ss_pred             hhhHHHHHHHHhh-CCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhcc---CCCCCCHHHHHHHHHHhH--------
Q 034245           12 PSSMIREVSCLME-LNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKY---PKDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~-l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~---~~~~~~~~~~~~~~~~~~--------   76 (100)
                      ...+.+|+.++.+ ++|||++++++.+.  +..++++||++ +++.+.+..   ....++...+..++.|++        
T Consensus        52 ~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~  131 (269)
T cd08528          52 IGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK  131 (269)
T ss_pred             HHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            3457788887765 79999999999988  88999999998 888877632   333477777777766654        


Q ss_pred             -----------hcccccCCCeEEEeecCCCCC
Q 034245           77 -----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                 +|+++..++.+|++|||++..
T Consensus       132 ~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~  163 (269)
T cd08528         132 EKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQ  163 (269)
T ss_pred             CCceeecCCCHHHEEECCCCcEEEecccceee
Confidence                       899999999999999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.24  E-value=9.9e-11  Score=74.63  Aligned_cols=84  Identities=21%  Similarity=0.276  Sum_probs=69.4

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~------   76 (100)
                      ....+.+|+.+++.++|||++++++.+.        ...++++||+.+++.+.+...   ++...+..++.|++      
T Consensus        58 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~L  134 (353)
T cd07850          58 HAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMD---LDHERMSYLLYQMLCGIKHL  134 (353)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEEeccCCCHHHHHhhc---CCHHHHHHHHHHHHHHHHHH
Confidence            3456778999999999999999998875        247999999998888877543   67777777777765      


Q ss_pred             ------------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                  +|++++.++.+|++|||++..
T Consensus       135 H~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~  167 (353)
T cd07850         135 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLART  167 (353)
T ss_pred             HhCCeeeCCCCHHHEEECCCCCEEEccCcccee
Confidence                        899999999999999998854

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.24  E-value=2.5e-11  Score=73.84  Aligned_cols=81  Identities=28%  Similarity=0.345  Sum_probs=71.0

Q ss_pred             HHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------------
Q 034245           15 MIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------------   76 (100)
Q Consensus        15 ~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------------   76 (100)
                      ..+|+..++.++|||++++.+.+.  ...++++|+++ +++.+++.... .++...+..++.|++               
T Consensus        45 ~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~d  123 (260)
T PF00069_consen   45 NIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQKNK-PLSEEEILKIAYQILEALAYLHSKGIVHRD  123 (260)
T ss_dssp             HHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHHHHS-SBBHHHHHHHHHHHHHHHHHHHHTTEEESS
T ss_pred             hhhhhhccccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccc
Confidence            456999999999999999999998  88999999999 79999988333 388888888888866               


Q ss_pred             ---hcccccCCCeEEEeecCCCC
Q 034245           77 ---RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ---~nil~~~~~~~ki~dfgl~~   96 (100)
                         +|+++..++.++++|||.+.
T Consensus       124 ikp~NIl~~~~~~~~l~Dfg~~~  146 (260)
T PF00069_consen  124 IKPENILLDENGEVKLIDFGSSV  146 (260)
T ss_dssp             BSGGGEEESTTSEEEESSGTTTE
T ss_pred             ccccccccccccccccccccccc
Confidence               89999999999999999874

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.24  E-value=7.4e-11  Score=78.53  Aligned_cols=88  Identities=20%  Similarity=0.213  Sum_probs=71.7

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee----------ccEEEEEeccc-ccHHHHhccC---CCCCCHHHHHHHHHH
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS----------QGLCLFLEYQA-NDLAYLLKYP---KDSMDGYSIKFSSSD   74 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~----------~~~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~~~~~   74 (100)
                      +.....+.+|+..+..++|+|++++++.+.          ..+++++||++ |+|.+.+...   ...+++..+..++.|
T Consensus        72 ~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~q  151 (496)
T PTZ00283         72 EADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQ  151 (496)
T ss_pred             HHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHH
Confidence            334456888999999999999999887765          13689999999 9999988643   234788888888877


Q ss_pred             hH------------------hcccccCCCeEEEeecCCCC
Q 034245           75 SL------------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        75 ~~------------------~nil~~~~~~~ki~dfgl~~   96 (100)
                      ++                  +||+++.++.+||+|||++.
T Consensus       152 ll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~  191 (496)
T PTZ00283        152 VLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSK  191 (496)
T ss_pred             HHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccCe
Confidence            65                  89999999999999999874

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.24  E-value=1.2e-10  Score=71.94  Aligned_cols=86  Identities=26%  Similarity=0.308  Sum_probs=69.9

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccC---------------CCCCCHHHHHHHHH
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYP---------------KDSMDGYSIKFSSS   73 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~---------------~~~~~~~~~~~~~~   73 (100)
                      ...+.+|+.+++.++|||++++++.+.  ...++++||++ +++..++...               ...++...+..++.
T Consensus        52 ~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (283)
T cd05091          52 REEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVT  131 (283)
T ss_pred             HHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHH
Confidence            356888999999999999999999988  78899999999 9998887421               11256666777777


Q ss_pred             HhH------------------hcccccCCCeEEEeecCCCCC
Q 034245           74 DSL------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        74 ~~~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      |++                  +|+++..++.+|++|||++..
T Consensus       132 ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  173 (283)
T cd05091         132 QIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFRE  173 (283)
T ss_pred             HHHHHHHHHHHcCccccccchhheEecCCCceEecccccccc
Confidence            765                  899999999999999998653

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.23  E-value=9.5e-11  Score=74.21  Aligned_cols=84  Identities=27%  Similarity=0.428  Sum_probs=69.9

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee----ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS----QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~----~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      ...+.+|+.+++++ +|||++++++.+.    ...++++||++++|...+...  .+++.....++.|++          
T Consensus        50 ~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~  127 (337)
T cd07852          50 AQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYMETDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSGN  127 (337)
T ss_pred             hhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEecccccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34577899999999 9999999999886    358999999998888888664  367777766666655          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +|++++.++.+|++|||++..
T Consensus       128 i~H~dl~p~nill~~~~~~kl~d~g~~~~  156 (337)
T cd07852         128 VIHRDLKPSNILLNSDCRVKLADFGLARS  156 (337)
T ss_pred             eecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence                    899999999999999998753

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.23  E-value=3.2e-12  Score=90.75  Aligned_cols=95  Identities=25%  Similarity=0.332  Sum_probs=77.7

Q ss_pred             eccCCCCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---
Q 034245            3 EIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---   76 (100)
Q Consensus         3 ~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---   76 (100)
                      +++..+......+.+|..++..++|||+|+++|+=.  ..++++||||. |+|.+.+.-.+. .++.....+..|++   
T Consensus      1269 ~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~gri-~dE~vt~vyt~qll~gl 1347 (1509)
T KOG4645|consen 1269 KIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEHGRI-EDEMVTRVYTKQLLEGL 1347 (1509)
T ss_pred             hcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccCcHHHHHHhcch-hhhhHHHHHHHHHHHHH
Confidence            445555556677889999999999999999999877  88999999999 999998865443 56666666666655   


Q ss_pred             ---------------hcccccCCCeEEEeecCCCCCC
Q 034245           77 ---------------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 ---------------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                                     +||+++.+|.+|.+|||.|...
T Consensus      1348 a~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki 1384 (1509)
T KOG4645|consen 1348 AYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKI 1384 (1509)
T ss_pred             HHHHhcCceecCCCccceeeecCCcEEeecccceeEe
Confidence                           8999999999999999988653

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.23  E-value=2.1e-10  Score=71.11  Aligned_cols=86  Identities=24%  Similarity=0.274  Sum_probs=69.8

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee-------ccEEEEEeccc-ccHHHHhcc---CCCCCCHHHHHHHHHHhH---
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS-------QGLCLFLEYQA-NDLAYLLKY---PKDSMDGYSIKFSSSDSL---   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~-------~~~~lv~e~~~-~~l~~~l~~---~~~~~~~~~~~~~~~~~~---   76 (100)
                      ...+.+|+.++.++ +|||++++++.+.       +..++++||++ ++|.+.+..   ....+++..+..++.|++   
T Consensus        62 ~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al  141 (291)
T cd06639          62 DEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGL  141 (291)
T ss_pred             HHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHH
Confidence            35677899999988 8999999999886       25899999999 899887753   223478888877777755   


Q ss_pred             ---------------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                     +|++++.++.+|++|||++..
T Consensus       142 ~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~  177 (291)
T cd06639         142 QHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQ  177 (291)
T ss_pred             HHHHhCCeeccCCCHHHEEEcCCCCEEEeecccchh
Confidence                           899999999999999998753

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.23  E-value=1.1e-10  Score=71.03  Aligned_cols=87  Identities=20%  Similarity=0.211  Sum_probs=71.6

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCC-CCCHHHHHHHHHHhH----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKD-SMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~-~~~~~~~~~~~~~~~----------   76 (100)
                      ....+.+|+.+++.++|+|++++++.+.  +..++++||++ ++|.+.+..... .+++..+..++.|++          
T Consensus        42 ~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~  121 (257)
T cd08225          42 EKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK  121 (257)
T ss_pred             hhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3456789999999999999999999888  88999999999 999998865432 367888777777755          


Q ss_pred             --------hcccccCCC-eEEEeecCCCCC
Q 034245           77 --------RCCLLSFGK-TVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~-~~ki~dfgl~~~   97 (100)
                              +|++++.++ .+|++|||.+..
T Consensus       122 i~H~dl~~~nil~~~~~~~~~l~d~~~~~~  151 (257)
T cd08225         122 ILHRDIKSQNIFLSKNGMVAKLGDFGIARQ  151 (257)
T ss_pred             cccccCCHHHEEEcCCCCeEEecccccchh
Confidence                    899998764 579999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.23  E-value=4.1e-11  Score=73.57  Aligned_cols=84  Identities=26%  Similarity=0.397  Sum_probs=74.1

Q ss_pred             hhHHHHHHHHhhCC-CCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           13 SSMIREVSCLMELN-HPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~-h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ..+.+|..++..++ |||++++++.+.  ...++++|++. ++|.+.+...+ .++...+..++.|++            
T Consensus        46 ~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh~~~~~  124 (280)
T cd05581          46 KYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLHSKGII  124 (280)
T ss_pred             HHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            46788999999998 999999999888  88999999998 99999998765 489999888888866            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +|+++..++.++++|||++..
T Consensus       125 H~dl~~~ni~i~~~~~~~l~df~~~~~  151 (280)
T cd05581         125 HRDLKPENILLDKDMHIKITDFGTAKV  151 (280)
T ss_pred             ecCCCHHHeEECCCCCEEecCCccccc
Confidence                  899999999999999998764

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.23  E-value=1.4e-10  Score=71.58  Aligned_cols=85  Identities=29%  Similarity=0.386  Sum_probs=69.8

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCC------CCCHHHHHHHHHHhH-------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKD------SMDGYSIKFSSSDSL-------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~------~~~~~~~~~~~~~~~-------   76 (100)
                      ..+.+|+.+++.++|+|++++++.+.  ...++++||++ ++|.+++.....      .+++..+..++.|++       
T Consensus        54 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH  133 (277)
T cd05036          54 SDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE  133 (277)
T ss_pred             HHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            46889999999999999999999887  77899999998 999998865431      267777777777765       


Q ss_pred             -----------hcccccCCC---eEEEeecCCCCC
Q 034245           77 -----------RCCLLSFGK---TVKVADLQALDW   97 (100)
Q Consensus        77 -----------~nil~~~~~---~~ki~dfgl~~~   97 (100)
                                 +|++++.++   .+|++|||++..
T Consensus       134 ~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~  168 (277)
T cd05036         134 ENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARD  168 (277)
T ss_pred             HCCEeecccchheEEEeccCCCcceEeccCccccc
Confidence                       899997654   689999998753

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.23  E-value=1e-10  Score=74.36  Aligned_cols=85  Identities=21%  Similarity=0.304  Sum_probs=69.8

Q ss_pred             hhHHHHHHHHhhC-CCCcceeeeeeee---ccEEEEEeccc-ccHHHHhccCC---------------------------
Q 034245           13 SSMIREVSCLMEL-NHPNIIRLMLVVS---QGLCLFLEYQA-NDLAYLLKYPK---------------------------   60 (100)
Q Consensus        13 ~~~~~e~~~l~~l-~h~~iv~l~~~~~---~~~~lv~e~~~-~~l~~~l~~~~---------------------------   60 (100)
                      ..+.+|+.++..+ +|+|++++++.+.   ..+++++||++ ++|.+.+....                           
T Consensus        55 ~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (337)
T cd05054          55 KALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLD  134 (337)
T ss_pred             HHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccc
Confidence            4577899999999 8999999999887   67899999999 99988875421                           


Q ss_pred             ---------------------------------CCCCHHHHHHHHHHhH------------------hcccccCCCeEEE
Q 034245           61 ---------------------------------DSMDGYSIKFSSSDSL------------------RCCLLSFGKTVKV   89 (100)
Q Consensus        61 ---------------------------------~~~~~~~~~~~~~~~~------------------~nil~~~~~~~ki   89 (100)
                                                       .++++..+..++.|++                  +|++++.++.+|+
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL  214 (337)
T cd05054         135 SVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKI  214 (337)
T ss_pred             cCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEE
Confidence                                             1356777777777765                  8999999999999


Q ss_pred             eecCCCCC
Q 034245           90 ADLQALDW   97 (100)
Q Consensus        90 ~dfgl~~~   97 (100)
                      +|||++..
T Consensus       215 ~DfG~a~~  222 (337)
T cd05054         215 CDFGLARD  222 (337)
T ss_pred             eccccchh
Confidence            99998864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.23  E-value=1.4e-10  Score=72.24  Aligned_cols=86  Identities=26%  Similarity=0.361  Sum_probs=71.5

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee----------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-----
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS----------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-----   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~----------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-----   76 (100)
                      ...+.+|+++++.++|||++++.+.+.          ..+++++||+.+++...+......++...+..++.|++     
T Consensus        51 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~  130 (311)
T cd07866          51 PITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINY  130 (311)
T ss_pred             chhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHH
Confidence            346789999999999999999988775          24799999999777777765444588888888888766     


Q ss_pred             -------------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                   +|+++..++.++++|||++..
T Consensus       131 lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~  164 (311)
T cd07866         131 LHENHILHRDIKAANILIDNQGILKIADFGLARP  164 (311)
T ss_pred             HHhCCeecCCCCHHHEEECCCCCEEECcCccchh
Confidence                         899999999999999998854

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.22  E-value=1.9e-10  Score=73.17  Aligned_cols=84  Identities=21%  Similarity=0.284  Sum_probs=70.4

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--c------cEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--Q------GLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~------~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------   76 (100)
                      ...+.+|+.+++.++|||++++.+.+.  .      ..++++|++.+++...+...  .+++..+..++.|++       
T Consensus        58 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~--~l~~~~~~~i~~qi~~al~~LH  135 (343)
T cd07880          58 AKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLMKHE--KLSEDRIQFLVYQMLKGLKYIH  135 (343)
T ss_pred             HHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEEecCCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Confidence            456889999999999999999999886  2      35899999888888877643  388888888888765       


Q ss_pred             -----------hcccccCCCeEEEeecCCCCC
Q 034245           77 -----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                 +|++++.++.+|++|||++..
T Consensus       136 ~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~  167 (343)
T cd07880         136 AAGIIHRDLKPGNLAVNEDCELKILDFGLARQ  167 (343)
T ss_pred             hCCeecCCCCHHHEEEcCCCCEEEeecccccc
Confidence                       899999999999999998864

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.22  E-value=1.6e-10  Score=70.54  Aligned_cols=86  Identities=23%  Similarity=0.326  Sum_probs=73.2

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC--CCCCHHHHHHHHHHhH---------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK--DSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~~~~~---------   76 (100)
                      ....+.+|+..++.++|+|++++.+.+.  ...++++|+++ +++...+....  ..+++..+..++.|++         
T Consensus        42 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~  121 (267)
T cd06610          42 SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN  121 (267)
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            3466889999999999999999999888  88999999999 99999987532  2378888887877765         


Q ss_pred             ---------hcccccCCCeEEEeecCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~   96 (100)
                               +|++++.++.++++|||++.
T Consensus       122 ~i~h~~l~p~ni~~~~~~~~~l~df~~~~  150 (267)
T cd06610         122 GQIHRDIKAGNILLGEDGSVKIADFGVSA  150 (267)
T ss_pred             CeecCCCCHHhEEEcCCCCEEEcccchHH
Confidence                     89999999999999999864

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.22  E-value=9.8e-11  Score=74.47  Aligned_cols=47  Identities=19%  Similarity=0.429  Sum_probs=40.6

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee---ccEEEEEeccc-ccHHHHhcc
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS---QGLCLFLEYQA-NDLAYLLKY   58 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~---~~~~lv~e~~~-~~l~~~l~~   58 (100)
                      ...+.+|+.++..+ +|||++++++.+.   ...++++||++ |+|.+++..
T Consensus        54 ~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~  105 (343)
T cd05103          54 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRS  105 (343)
T ss_pred             HHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEEeccCCCcHHHHHHh
Confidence            34688999999999 6899999999876   66899999999 999988754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.22  E-value=7.2e-11  Score=71.48  Aligned_cols=85  Identities=22%  Similarity=0.317  Sum_probs=73.4

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  ...++++|+++ ++|.+.+.... .+++..+..++.|++            
T Consensus        37 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh~~~~~  115 (250)
T cd05123          37 VEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSKEG-RFSEERARFYAAEIVLALEYLHSLGII  115 (250)
T ss_pred             HHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence            346888999999999999999999888  88999999998 99999987654 378888888877765            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +|++++.++.++++|||.+..
T Consensus       116 H~~l~p~ni~~~~~~~~~l~d~~~~~~  142 (250)
T cd05123         116 YRDLKPENILLDADGHIKLTDFGLAKE  142 (250)
T ss_pred             ecCCCcceEEEcCCCcEEEeecCccee
Confidence                  899999999999999998753

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.22  E-value=3.2e-11  Score=80.42  Aligned_cols=84  Identities=21%  Similarity=0.284  Sum_probs=74.4

Q ss_pred             hhHHHHHHHHhhCC---CCcceeeeeeee--ccEEEEEeccc--ccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245           13 SSMIREVSCLMELN---HPNIIRLMLVVS--QGLCLFLEYQA--NDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~---h~~iv~l~~~~~--~~~~lv~e~~~--~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      ..+..||.+|..++   |+||+++.+.|+  +..|+.+|--.  -+|++++...+. +++..+..+++|+.         
T Consensus       611 GtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~kp~-m~E~eAk~IFkQV~agi~hlh~~  689 (772)
T KOG1152|consen  611 GTVPSEIQILATLNKHSHENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFKPR-MDEPEAKLIFKQVVAGIKHLHDQ  689 (772)
T ss_pred             CccchhHHHHHHhhhcCccchhhhhheeecCCeeEEEecCCCCCcchhhhhhccCc-cchHHHHHHHHHHHhcccccccc
Confidence            34667999999997   999999999999  88999999876  789999988765 99999999999976         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               +|++++.+|-+|++|||-|..
T Consensus       690 ~ivhrdikdenvivd~~g~~klidfgsaa~  719 (772)
T KOG1152|consen  690 GIVHRDIKDENVIVDSNGFVKLIDFGSAAY  719 (772)
T ss_pred             CceecccccccEEEecCCeEEEeeccchhh
Confidence                     899999999999999998754

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.21  E-value=1.6e-10  Score=71.33  Aligned_cols=85  Identities=21%  Similarity=0.284  Sum_probs=69.4

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--------ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH----
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--------QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL----   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--------~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~----   76 (100)
                      ...+.+|+.+++.+ +|+|++++++.+.        ...++++||++ +++..++.... ..++...+..++.|++    
T Consensus        56 ~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~  135 (282)
T cd06636          56 EEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLA  135 (282)
T ss_pred             HHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHH
Confidence            45677899988888 7999999998874        46799999999 89999887543 3367777777777755    


Q ss_pred             --------------hcccccCCCeEEEeecCCCC
Q 034245           77 --------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 --------------~nil~~~~~~~ki~dfgl~~   96 (100)
                                    +|+++..++.++++|||++.
T Consensus       136 ~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~  169 (282)
T cd06636         136 HLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSA  169 (282)
T ss_pred             HHHHCCcccCCCCHHHEEECCCCCEEEeeCcchh
Confidence                          89999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.21  E-value=1e-10  Score=73.82  Aligned_cols=84  Identities=23%  Similarity=0.153  Sum_probs=71.3

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~----------   76 (100)
                      ..+.+.+|+.+++.++|||++++++++.  ...++++||+. +++.+++.... ..+++..+..++.|++          
T Consensus        42 ~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~  121 (328)
T cd08226          42 HLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG  121 (328)
T ss_pred             HHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3467888999999999999999999998  88899999999 89998887643 2378888878877765          


Q ss_pred             --------hcccccCCCeEEEeecCC
Q 034245           77 --------RCCLLSFGKTVKVADLQA   94 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl   94 (100)
                              +|+++..++.+|+.||+.
T Consensus       122 ivHrDlkp~Nill~~~~~~~~~~~~~  147 (328)
T cd08226         122 YIHRNIKASHILISGDGLVSLSGLSH  147 (328)
T ss_pred             eecCCCCHHHEEEeCCCcEEEechHH
Confidence                    899999999999999874

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.21  E-value=1.3e-10  Score=71.92  Aligned_cols=84  Identities=17%  Similarity=0.177  Sum_probs=70.9

Q ss_pred             hhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           13 SSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ..+.+|+.++..+ +||+++.+.+.+.  ...++++||++ ++|...+.... .++...+..++.|++            
T Consensus        49 ~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~~~  127 (288)
T cd05583          49 EHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQRE-HFTESEVRVYIAEIVLALDHLHQLGII  127 (288)
T ss_pred             HHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEEecCCCCcHHHHHhhcC-CcCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            4577899999999 6999999998888  78899999999 89998887654 378888777777755            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +|++++.++.++++|||++..
T Consensus       128 H~dl~p~nil~~~~~~~~l~dfg~~~~  154 (288)
T cd05583         128 YRDIKLENILLDSEGHVVLTDFGLSKE  154 (288)
T ss_pred             ccCCCHHHeEECCCCCEEEEECccccc
Confidence                  899999999999999998754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.21  E-value=1.2e-10  Score=73.75  Aligned_cols=85  Identities=21%  Similarity=0.299  Sum_probs=70.7

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee-------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS-------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~-------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------   76 (100)
                      ....+.+|+.++++++|+|++++++.+.       ...++++|++++++...+...  .++...+..++.|++       
T Consensus        46 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~--~l~~~~~~~i~~ql~~aL~~LH  123 (336)
T cd07849          46 FCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELMETDLYKLIKTQ--HLSNDHIQYFLYQILRGLKYIH  123 (336)
T ss_pred             hHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehhcccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Confidence            3456788999999999999999998765       347999999998888877654  378888888877765       


Q ss_pred             -----------hcccccCCCeEEEeecCCCCC
Q 034245           77 -----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                 +|++++.++.+|++|||++..
T Consensus       124 ~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~  155 (336)
T cd07849         124 SANVLHRDLKPSNLLLNTNCDLKICDFGLARI  155 (336)
T ss_pred             hCCeeccCCCHHHEEECCCCCEEECcccceee
Confidence                       899999999999999998753

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.21  E-value=6.7e-11  Score=74.55  Aligned_cols=88  Identities=22%  Similarity=0.301  Sum_probs=74.5

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--c-----cEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--Q-----GLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~-----~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~------   76 (100)
                      .....+.+|+..++.++|+|++++.+.+.  .     .+|+++||+++++.+.+.... ++++..+..++.|++      
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~L  119 (330)
T cd07834          41 IDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELMETDLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYL  119 (330)
T ss_pred             hhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecchhhhHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHH
Confidence            34467889999999999999999999887  3     689999999988888887654 488888888877765      


Q ss_pred             ------------hcccccCCCeEEEeecCCCCCC
Q 034245           77 ------------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 ------------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                                  +|++++.++.++++|||++...
T Consensus       120 H~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~  153 (330)
T cd07834         120 HSANVIHRDLKPSNILVNSNCDLKICDFGLARGV  153 (330)
T ss_pred             HhCCeecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence                        8999999999999999987643

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.20  E-value=2.7e-10  Score=68.93  Aligned_cols=86  Identities=29%  Similarity=0.347  Sum_probs=73.8

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee-c---cEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS-Q---GLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~---~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      ....+.+|+..+++++|||++++.+.+. .   ..++++|+++ +++.+.+.... .+++..+..++.|++         
T Consensus        42 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~  120 (260)
T cd06606          42 ELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSN  120 (260)
T ss_pred             HHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            4567889999999999999999999888 3   6889999998 99999987765 488888888877765         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               +|+++..++.++++|||.+..
T Consensus       121 ~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~  150 (260)
T cd06606         121 GIVHRDIKGANILVDSDGVVKLADFGCAKR  150 (260)
T ss_pred             CccccCCCHHHEEEcCCCCEEEcccccEEe
Confidence                     899999999999999997754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.20  E-value=2.6e-10  Score=70.27  Aligned_cols=88  Identities=32%  Similarity=0.386  Sum_probs=70.2

Q ss_pred             cchhhHHHHHHHHhhC---CCCcceeeeeeee--cc-----EEEEEecccccHHHHhccCC-CCCCHHHHHHHHHHhH--
Q 034245           10 EVPSSMIREVSCLMEL---NHPNIIRLMLVVS--QG-----LCLFLEYQANDLAYLLKYPK-DSMDGYSIKFSSSDSL--   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l---~h~~iv~l~~~~~--~~-----~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~--   76 (100)
                      +....+.+|+.+++.+   +|||++++.+.+.  ..     .++++|++++++.+++.... ..+++..+..++.|++  
T Consensus        40 ~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~a  119 (287)
T cd07838          40 GIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRG  119 (287)
T ss_pred             hhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHH
Confidence            3345677888877665   5999999999988  44     89999999977888776543 2478888888887765  


Q ss_pred             ----------------hcccccCCCeEEEeecCCCCC
Q 034245           77 ----------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                      +|++++.++.+|++|||++..
T Consensus       120 l~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~  156 (287)
T cd07838         120 VDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARI  156 (287)
T ss_pred             HHHHHHCCeeeccCChhhEEEccCCCEEEeccCccee
Confidence                            899999999999999998754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.19  E-value=5.8e-12  Score=84.82  Aligned_cols=93  Identities=20%  Similarity=0.299  Sum_probs=76.3

Q ss_pred             eeccCCCCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH--
Q 034245            2 MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL--   76 (100)
Q Consensus         2 ~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~--   76 (100)
                      +|++..+.  ...+.+|+-+++..+||||+.+++.+.  ..+|+.||||. |++.+.-..- .++++.++...++..+  
T Consensus        48 VkLep~dd--~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggslQdiy~~T-gplselqiayvcRetl~g  124 (829)
T KOG0576|consen   48 VKLEPGDD--FSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQG  124 (829)
T ss_pred             eeccCCcc--ccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCcccceeeec-ccchhHHHHHHHhhhhcc
Confidence            44443333  466888999999999999999999999  99999999999 8877764433 4588888888887755  


Q ss_pred             ----------------hcccccCCCeEEEeecCCCCC
Q 034245           77 ----------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                      .|++++..|.+|++|||.+..
T Consensus       125 l~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaq  161 (829)
T KOG0576|consen  125 LKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQ  161 (829)
T ss_pred             chhhhcCCcccccccccceeecccCceeecccCchhh
Confidence                            899999999999999998754

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.19  E-value=1.1e-10  Score=78.91  Aligned_cols=87  Identities=25%  Similarity=0.296  Sum_probs=69.2

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--------ccEEEEEeccc-ccHHHHhccCC--CCCCHHHHHHHHHHhH----
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--------QGLCLFLEYQA-NDLAYLLKYPK--DSMDGYSIKFSSSDSL----   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--------~~~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~~~~~----   76 (100)
                      ++.+.+|++++++++|+|||+++++=+        ....+++|||+ |+|...+.+-.  .++++..+..+...+.    
T Consensus        55 ~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~  134 (732)
T KOG4250|consen   55 RERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALR  134 (732)
T ss_pred             HHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHH
Confidence            467889999999999999999998765        34689999999 99999997643  3488888877766644    


Q ss_pred             --------------hcccccC----CCeEEEeecCCCCCC
Q 034245           77 --------------RCCLLSF----GKTVKVADLQALDWP   98 (100)
Q Consensus        77 --------------~nil~~~----~~~~ki~dfgl~~~~   98 (100)
                                    .||++-.    ....|++|||.|.-.
T Consensus       135 ~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel  174 (732)
T KOG4250|consen  135 HLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAREL  174 (732)
T ss_pred             HHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccC
Confidence                          6777642    236799999998654

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.19  E-value=1.9e-10  Score=75.59  Aligned_cols=84  Identities=21%  Similarity=0.195  Sum_probs=65.8

Q ss_pred             hHHHHHHHHhhCCCCcceeeeeeee----------ccEEEEEecccccHHHHhcc---CCCCCCHHHHHHHHHHhH----
Q 034245           14 SMIREVSCLMELNHPNIIRLMLVVS----------QGLCLFLEYQANDLAYLLKY---PKDSMDGYSIKFSSSDSL----   76 (100)
Q Consensus        14 ~~~~e~~~l~~l~h~~iv~l~~~~~----------~~~~lv~e~~~~~l~~~l~~---~~~~~~~~~~~~~~~~~~----   76 (100)
                      ...+|+.+++.++|||++++.+.+.          ..+++++||+++++.+.+..   ....++...+..++.|++    
T Consensus       105 ~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~  184 (440)
T PTZ00036        105 YKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALA  184 (440)
T ss_pred             hHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHH
Confidence            3557999999999999999988764          24679999999777766643   223478888888777765    


Q ss_pred             --------------hcccccCC-CeEEEeecCCCCC
Q 034245           77 --------------RCCLLSFG-KTVKVADLQALDW   97 (100)
Q Consensus        77 --------------~nil~~~~-~~~ki~dfgl~~~   97 (100)
                                    +||+++.+ +.+||+|||++..
T Consensus       185 yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~  220 (440)
T PTZ00036        185 YIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKN  220 (440)
T ss_pred             HHHHCCEecCCcCHHHEEEcCCCCceeeeccccchh
Confidence                          89999865 4799999999863

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.19  E-value=4.3e-10  Score=69.26  Aligned_cols=83  Identities=29%  Similarity=0.334  Sum_probs=69.3

Q ss_pred             hHHHHHHHHhhC-CCCcceeeeeeee----ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           14 SMIREVSCLMEL-NHPNIIRLMLVVS----QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        14 ~~~~e~~~l~~l-~h~~iv~l~~~~~----~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+|+..+..+ +|+|++++++.+.    +..++++||+++++...+......+++..+..++.|++            
T Consensus        43 ~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~  122 (282)
T cd07831          43 NNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIF  122 (282)
T ss_pred             hHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence            345788888888 4999999999988    57899999999888888776544588888888887765            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +|++++. +.+|++|||++..
T Consensus       123 H~dl~p~ni~l~~-~~~kl~dfg~~~~  148 (282)
T cd07831         123 HRDIKPENILIKD-DILKLADFGSCRG  148 (282)
T ss_pred             ecccCHHHEEEcC-CCeEEEecccccc
Confidence                  8999999 9999999998854

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.18  E-value=2.1e-11  Score=85.81  Aligned_cols=82  Identities=21%  Similarity=0.228  Sum_probs=71.7

Q ss_pred             hHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH--------------
Q 034245           14 SMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL--------------   76 (100)
Q Consensus        14 ~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~--------------   76 (100)
                      -|.-|-.++..-+.+.|++++-.|.  .++|+||||++ |+|...+.+.. .+++..++++...+.              
T Consensus       121 ~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~mgyVHR  199 (1317)
T KOG0612|consen  121 CFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSMGYVHR  199 (1317)
T ss_pred             HHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhccceec
Confidence            3566777788778999999998888  99999999999 99999999987 599999999877643              


Q ss_pred             ----hcccccCCCeEEEeecCCCC
Q 034245           77 ----RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ----~nil~~~~~~~ki~dfgl~~   96 (100)
                          +|++++..|++|++|||-+-
T Consensus       200 DiKPDNvLld~~GHikLADFGsCl  223 (1317)
T KOG0612|consen  200 DIKPDNVLLDKSGHIKLADFGSCL  223 (1317)
T ss_pred             cCCcceeEecccCcEeeccchhHH
Confidence                99999999999999999653

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.18  E-value=1.1e-10  Score=70.84  Aligned_cols=87  Identities=25%  Similarity=0.313  Sum_probs=71.4

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccC---CCCCCHHHHHHHHHHhH--------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYP---KDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~~~~~~~--------   76 (100)
                      ....+.+|+..++.++|+|++++.+.+.  ...++++||++ +++..++...   ...+++..+..++.|++        
T Consensus        42 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~  121 (256)
T cd08530          42 EREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE  121 (256)
T ss_pred             HHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            3456788999999999999999998888  88999999998 8998887652   12377777777766654        


Q ss_pred             ----------hcccccCCCeEEEeecCCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                +|++++.++.+|++|||++..
T Consensus       122 ~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~  152 (256)
T cd08530         122 QKILHRDLKSANILLVANDLVKIGDLGISKV  152 (256)
T ss_pred             CCcccCCCCcceEEEecCCcEEEeeccchhh
Confidence                      799999999999999998754

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.16  E-value=5.8e-10  Score=68.45  Aligned_cols=87  Identities=26%  Similarity=0.326  Sum_probs=68.5

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--------ccEEEEEeccc-ccHHHHhccC-----CCCCCHHHHHHHHHHhH
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--------QGLCLFLEYQA-NDLAYLLKYP-----KDSMDGYSIKFSSSDSL   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--------~~~~lv~e~~~-~~l~~~l~~~-----~~~~~~~~~~~~~~~~~   76 (100)
                      ....+.+|+.++++++|||++++++.+.        ...+++++|+. +++..++...     ...++...+..++.|++
T Consensus        44 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~  123 (273)
T cd05074          44 DIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIA  123 (273)
T ss_pred             HHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Confidence            3456889999999999999999999875        12478889998 9988776421     12267777777777765


Q ss_pred             ------------------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                        +|++++.++.+|++|||++..
T Consensus       124 ~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~  162 (273)
T cd05074         124 SGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKK  162 (273)
T ss_pred             HHHHHHHhCCEeecccchhhEEEcCCCCEEECccccccc
Confidence                              899999999999999998764

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.15  E-value=6.9e-10  Score=67.71  Aligned_cols=82  Identities=18%  Similarity=0.186  Sum_probs=67.2

Q ss_pred             HHHHHHHH-hhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH--------------
Q 034245           15 MIREVSCL-MELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL--------------   76 (100)
Q Consensus        15 ~~~e~~~l-~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~--------------   76 (100)
                      +..|...+ ...+|+|++++++.+.  +..++++||++ ++|..++.... +++...+..++.|++              
T Consensus        43 ~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~i~H~  121 (260)
T cd05611          43 VKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLG-GLPEDWAKQYIAEVVLGVEDLHQRGIIHR  121 (260)
T ss_pred             HHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence            34454433 4458999999999998  88999999999 99999887654 378888888888865              


Q ss_pred             ----hcccccCCCeEEEeecCCCCC
Q 034245           77 ----RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----~nil~~~~~~~ki~dfgl~~~   97 (100)
                          +||+++.++.+|++|||++..
T Consensus       122 dl~p~nil~~~~~~~~l~dfg~~~~  146 (260)
T cd05611         122 DIKPENLLIDQTGHLKLTDFGLSRN  146 (260)
T ss_pred             CCCHHHeEECCCCcEEEeeccccee
Confidence                899999999999999998754

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.15  E-value=1.5e-10  Score=75.49  Aligned_cols=84  Identities=21%  Similarity=0.325  Sum_probs=75.3

Q ss_pred             hHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCC-CCHHHHHHHHHHhH-------------
Q 034245           14 SMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDS-MDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        14 ~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~-~~~~~~~~~~~~~~-------------   76 (100)
                      -.+.|-.+|.++..+.||.+--.|+  +.+++|+..+. |+|.-.|...+++ +++..+.+++.+++             
T Consensus       231 maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVY  310 (591)
T KOG0986|consen  231 MALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVY  310 (591)
T ss_pred             HhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceee
Confidence            4678999999999999999977787  99999999999 9999888887633 99999999998876             


Q ss_pred             -----hcccccCCCeEEEeecCCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~~   97 (100)
                           +||+++..|+++|+|+|+|+-
T Consensus       311 RDLKPeNILLDd~GhvRISDLGLAve  336 (591)
T KOG0986|consen  311 RDLKPENILLDDHGHVRISDLGLAVE  336 (591)
T ss_pred             ccCChhheeeccCCCeEeeccceEEe
Confidence                 899999999999999999863

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.14  E-value=3.9e-12  Score=81.88  Aligned_cols=86  Identities=26%  Similarity=0.281  Sum_probs=72.3

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ..+++.+|+.+|..++++|+.++++.+.  ..+|++|||+. |.+.+.++.... +.+..+..+.++++           
T Consensus        54 eIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGsv~~lL~~~~~-~~E~~i~~ilre~l~~l~ylH~~~k  132 (467)
T KOG0201|consen   54 EIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGSVLDLLKSGNI-LDEFEIAVILREVLKGLDYLHSEKK  132 (467)
T ss_pred             hhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcchhhhhccCCC-CccceeeeehHHHHHHhhhhhhcce
Confidence            4678999999999999999999999998  88999999999 999999876542 46555555555543           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             .|+++...|.+|++|||.+..
T Consensus       133 iHrDIKaanil~s~~g~vkl~DfgVa~q  160 (467)
T KOG0201|consen  133 IHRDIKAANILLSESGDVKLADFGVAGQ  160 (467)
T ss_pred             ecccccccceeEeccCcEEEEecceeee
Confidence                   899999999999999998753

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.14  E-value=2.2e-10  Score=72.87  Aligned_cols=86  Identities=20%  Similarity=0.260  Sum_probs=71.3

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--c------cEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--Q------GLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~------~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~------   76 (100)
                      ....+.+|+.++++++|||++++.+.+.  .      ..++++|++.++|.+.+...  .+++..+..++.|++      
T Consensus        57 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~l~~~~~~~~~~ql~~aL~~L  134 (343)
T cd07851          57 HAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKCQ--KLSDDHIQFLVYQILRGLKYI  134 (343)
T ss_pred             HHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEEecCCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH
Confidence            3456778999999999999999988776  3      38999999988898888753  388888888877765      


Q ss_pred             ------------hcccccCCCeEEEeecCCCCCC
Q 034245           77 ------------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 ------------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                                  +|++++.++.++++|||++...
T Consensus       135 H~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~  168 (343)
T cd07851         135 HSAGIIHRDLKPSNIAVNEDCELKILDFGLARHT  168 (343)
T ss_pred             HHCCeecCCCCHHHeEECCCCCEEEccccccccc
Confidence                        8999999999999999988643

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.14  E-value=6.2e-10  Score=68.61  Aligned_cols=85  Identities=9%  Similarity=0.136  Sum_probs=67.1

Q ss_pred             hhHHHHHHH-HhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccC---CCCCCHHHHHHHHHHhH----------
Q 034245           13 SSMIREVSC-LMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYP---KDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        13 ~~~~~e~~~-l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~----------   76 (100)
                      ..+.+|... ++..+|||++++++.+.  +..++++||+++++.+++...   ...+++..+..++.|++          
T Consensus        44 ~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  123 (283)
T cd06617          44 KRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL  123 (283)
T ss_pred             HHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC
Confidence            346667664 56679999999999988  889999999998877776532   22378888877777755          


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               +|++++.++.+|++|||++..
T Consensus       124 ~i~h~dlkp~nil~~~~~~~kl~dfg~~~~  153 (283)
T cd06617         124 SVIHRDVKPSNVLINRNGQVKLCDFGISGY  153 (283)
T ss_pred             CeecCCCCHHHEEECCCCCEEEeecccccc
Confidence                     788999999999999998753

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.14  E-value=6e-10  Score=70.94  Aligned_cols=84  Identities=19%  Similarity=0.260  Sum_probs=68.7

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------   76 (100)
                      ...+.+|+.+++.++|||++++.+.+.        ...+++++++.+++...+...  .+++..+..++.|++       
T Consensus        60 ~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH  137 (345)
T cd07877          60 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIH  137 (345)
T ss_pred             HHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEEehhcccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Confidence            356778999999999999999998875        336788887778888777643  378888888877765       


Q ss_pred             -----------hcccccCCCeEEEeecCCCCC
Q 034245           77 -----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                 +|++++.++.+|++|||++..
T Consensus       138 ~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~  169 (345)
T cd07877         138 SADIIHRDLKPSNLAVNEDCELKILDFGLARH  169 (345)
T ss_pred             HCCeeecCCChHHEEEcCCCCEEEeccccccc
Confidence                       899999999999999998754

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.14  E-value=1.8e-10  Score=74.70  Aligned_cols=84  Identities=20%  Similarity=0.177  Sum_probs=66.8

Q ss_pred             hhHHHHHHHHhh--CCCCcceeeeeeee------ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------
Q 034245           13 SSMIREVSCLME--LNHPNIIRLMLVVS------QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~--l~h~~iv~l~~~~~------~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------   76 (100)
                      .++-||.++...  ++|+||..+.+.=.      ..+|++++|.+ |+|++++....  ++......++..++       
T Consensus       248 ~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~t--v~~~~ml~LalS~AsGLaHLH  325 (513)
T KOG2052|consen  248 RSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRNT--VTTEGMLKLALSIASGLAHLH  325 (513)
T ss_pred             hhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhhcc--CCHHHHHHHHHHHhhhHHHHH
Confidence            456777776654  69999999876533      78999999999 99999998753  67666665554433       


Q ss_pred             -------------------hcccccCCCeEEEeecCCCCCC
Q 034245           77 -------------------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 -------------------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                                         .||++..++..-|+|+|||..-
T Consensus       326 ~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h  366 (513)
T KOG2052|consen  326 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH  366 (513)
T ss_pred             HHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEe
Confidence                               8999999999999999999653

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.14  E-value=9.2e-10  Score=68.15  Aligned_cols=81  Identities=21%  Similarity=0.294  Sum_probs=66.0

Q ss_pred             HHHHHHHHhh---CCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           15 MIREVSCLME---LNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        15 ~~~e~~~l~~---l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      +.+|..+++.   .+||+++.+.+.+.  +..++++||++ ++|...+..... +++..+..++.|++            
T Consensus        41 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~-l~~~~~~~i~~qi~~al~~lH~~~iv  119 (279)
T cd05633          41 ALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGV-FSEKEMRFYATEIILGLEHMHNRFVV  119 (279)
T ss_pred             HHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCcC
Confidence            3445444433   47999999998887  88999999999 999888876543 89898888887765            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +||+++.++.++++|||++.
T Consensus       120 H~dikp~Nil~~~~~~~~l~dfg~~~  145 (279)
T cd05633         120 YRDLKPANILLDEHGHVRISDLGLAC  145 (279)
T ss_pred             CCCCCHHHEEECCCCCEEEccCCcce
Confidence                  89999999999999999874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.14  E-value=2.5e-10  Score=69.67  Aligned_cols=84  Identities=19%  Similarity=0.288  Sum_probs=68.0

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhcc---CCCCCCHHHHHHHHHHhH---------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKY---PKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~---~~~~~~~~~~~~~~~~~~---------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  ...++++||++ +++...+..   ....+++..+..++.|++         
T Consensus        46 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~  125 (260)
T cd08222          46 TVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR  125 (260)
T ss_pred             HHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc
Confidence            445778999999999999999999888  77899999999 898887753   223478888888877765         


Q ss_pred             ---------hcccccCCCeEEEeecCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~   96 (100)
                               +|+++.. +.++++|||++.
T Consensus       126 ~i~h~~l~~~nili~~-~~~~l~d~g~~~  153 (260)
T cd08222         126 RILHRDLKAKNIFLKN-NLLKIGDFGVSR  153 (260)
T ss_pred             CccccCCChhheEeec-CCEeecccCcee
Confidence                     7888864 569999999764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.13  E-value=8.9e-10  Score=69.71  Aligned_cols=84  Identities=19%  Similarity=0.215  Sum_probs=69.7

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH--------
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~--------   76 (100)
                      .+.+.+|+.+++.+ +|||++++.+.+.      ...+++++++.++|...+.... +++...+..++.|++        
T Consensus        45 ~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~  123 (332)
T cd07857          45 AKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELMEADLHQIIRSGQ-PLTDAHFQSFIYQILCGLKYIHS  123 (332)
T ss_pred             HHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEecccCCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            45678899999998 6999999988643      4578888888888888886654 388888888888866        


Q ss_pred             ----------hcccccCCCeEEEeecCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~   96 (100)
                                +||+++.++.+||+|||++.
T Consensus       124 ~givH~dlkp~Nili~~~~~~kl~Dfg~a~  153 (332)
T cd07857         124 ANVLHRDLKPGNLLVNADCELKICDFGLAR  153 (332)
T ss_pred             CCcccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence                      89999999999999999875

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.13  E-value=7.5e-10  Score=68.47  Aligned_cols=75  Identities=19%  Similarity=0.259  Sum_probs=63.4

Q ss_pred             HHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------------hcc
Q 034245           21 CLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------------RCC   79 (100)
Q Consensus        21 ~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------------~ni   79 (100)
                      .++...||+++.+.+.+.  ...++++||++ ++|...+.... .+++..+..++.|++                  +|+
T Consensus        50 ~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~ni  128 (278)
T cd05606          50 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG-VFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANI  128 (278)
T ss_pred             HHHhCCCCcEeeeeeeeecCCEEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHE
Confidence            344457999999999888  88999999999 99988886654 388999888888865                  899


Q ss_pred             cccCCCeEEEeecCCCC
Q 034245           80 LLSFGKTVKVADLQALD   96 (100)
Q Consensus        80 l~~~~~~~ki~dfgl~~   96 (100)
                      +++.++.+|++|||++.
T Consensus       129 li~~~~~~kl~dfg~~~  145 (278)
T cd05606         129 LLDEHGHVRISDLGLAC  145 (278)
T ss_pred             EECCCCCEEEccCcCcc
Confidence            99999999999999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.13  E-value=1.3e-10  Score=73.17  Aligned_cols=92  Identities=18%  Similarity=0.178  Sum_probs=76.4

Q ss_pred             cCCCCcchhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----
Q 034245            5 HNTMEEVPSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----   76 (100)
Q Consensus         5 ~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----   76 (100)
                      +....+.+.++.||++.+... .|+||+++.+.|+  ...|+|+|.+. |++...|..+.. +++..+..+.++++    
T Consensus       112 dKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~~~~~-F~E~EAs~vvkdia~aLd  190 (463)
T KOG0607|consen  112 DKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQKRKH-FNEREASRVVKDIASALD  190 (463)
T ss_pred             hcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchHHHHHHHhhh-ccHHHHHHHHHHHHHHHH
Confidence            444556678899999999998 5999999999999  89999999999 999999887665 88888777776655    


Q ss_pred             --------------hcccccCC---CeEEEeecCCCCC
Q 034245           77 --------------RCCLLSFG---KTVKVADLQALDW   97 (100)
Q Consensus        77 --------------~nil~~~~---~~~ki~dfgl~~~   97 (100)
                                    +||+....   ..+||+||.+++-
T Consensus       191 FlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg  228 (463)
T KOG0607|consen  191 FLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSG  228 (463)
T ss_pred             HHhhcCcccccCCccceeecCCCCcCceeeeccccccc
Confidence                          89988643   4789999998764

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.13  E-value=4e-11  Score=75.71  Aligned_cols=82  Identities=20%  Similarity=0.347  Sum_probs=69.7

Q ss_pred             hHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH--------------
Q 034245           14 SMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL--------------   76 (100)
Q Consensus        14 ~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~--------------   76 (100)
                      .-+-|-++|...+||.+..+.-.|.  +++++||||.. |+|+-.+...+. +++...+++...+.              
T Consensus       214 HTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanGGeLf~HLsrer~-FsE~RtRFYGaEIvsAL~YLHs~~ivYR  292 (516)
T KOG0690|consen  214 HTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANGGELFFHLSRERV-FSEDRTRFYGAEIVSALGYLHSRNIVYR  292 (516)
T ss_pred             hhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccCceEeeehhhhhc-ccchhhhhhhHHHHHHhhhhhhCCeeee
Confidence            3556888999999999999987787  99999999999 999888877664 88888777765533              


Q ss_pred             ----hcccccCCCeEEEeecCCCC
Q 034245           77 ----RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ----~nil~~~~~~~ki~dfgl~~   96 (100)
                          +|++++.+|++||+|||+..
T Consensus       293 DlKLENLlLDkDGHIKitDFGLCK  316 (516)
T KOG0690|consen  293 DLKLENLLLDKDGHIKITDFGLCK  316 (516)
T ss_pred             echhhhheeccCCceEeeecccch
Confidence                89999999999999999874

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.12  E-value=3.2e-10  Score=75.32  Aligned_cols=92  Identities=23%  Similarity=0.214  Sum_probs=71.4

Q ss_pred             CCCCcchhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH------
Q 034245            6 NTMEEVPSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL------   76 (100)
Q Consensus         6 ~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~------   76 (100)
                      ..|+.....+.+|+.+|.++ .|.+||+++++-.  +.+|+|||+-+.+|.++++......+.-.++++-.|++      
T Consensus       397 ~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~I  476 (677)
T KOG0596|consen  397 EADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTI  476 (677)
T ss_pred             hcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHH
Confidence            34555567799999999999 5999999999766  99999999888999999987664344336666666654      


Q ss_pred             ------------hcccccCCCeEEEeecCCCCCC
Q 034245           77 ------------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 ------------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                                  .|+++ -.|.+|++|||+|...
T Consensus       477 H~~gIVHSDLKPANFLl-VkG~LKLIDFGIA~aI  509 (677)
T KOG0596|consen  477 HQHGIVHSDLKPANFLL-VKGRLKLIDFGIANAI  509 (677)
T ss_pred             HHhceeecCCCcccEEE-EeeeEEeeeechhccc
Confidence                        56554 4689999999998643

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.09  E-value=8.7e-10  Score=68.63  Aligned_cols=86  Identities=14%  Similarity=0.171  Sum_probs=68.1

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+..+.+. .|||++++++.+.  ...++++|++++.+..........+++..+..++.|++            
T Consensus        57 ~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i  136 (296)
T cd06618          57 NKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGV  136 (296)
T ss_pred             HHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCE
Confidence            45577788766666 5999999999988  88999999988777776655444578777777766654            


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +|++++.++.+||+|||++..
T Consensus       137 ~H~dl~p~nill~~~~~~kL~dfg~~~~  164 (296)
T cd06618         137 IHRDVKPSNILLDASGNVKLCDFGISGR  164 (296)
T ss_pred             ecCCCcHHHEEEcCCCCEEECccccchh
Confidence                   788999999999999998753

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.08  E-value=5.7e-10  Score=68.79  Aligned_cols=83  Identities=33%  Similarity=0.396  Sum_probs=70.9

Q ss_pred             hHHHHHHHHhhCC-CCcceeeeeeee--ccEEEEEecccccHHHHhccCC-CCCCHHHHHHHHHHhH-------------
Q 034245           14 SMIREVSCLMELN-HPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPK-DSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        14 ~~~~e~~~l~~l~-h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~-------------   76 (100)
                      ...+|+..++.++ |+|++++++.+.  +..++++||+.+++.+.+.... ..+++..+..++.|++             
T Consensus        43 ~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H  122 (283)
T cd07830          43 MNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFH  122 (283)
T ss_pred             HHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            3457999999998 999999999988  8899999999988888887654 3478888888877765             


Q ss_pred             -----hcccccCCCeEEEeecCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~   96 (100)
                           +|++++.++.++++|||++.
T Consensus       123 ~dl~~~ni~i~~~~~~~l~d~~~~~  147 (283)
T cd07830         123 RDLKPENLLVSGPEVVKIADFGLAR  147 (283)
T ss_pred             CCCChhhEEEcCCCCEEEeecccce
Confidence                 89999999999999999875

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.08  E-value=1.7e-09  Score=66.54  Aligned_cols=71  Identities=24%  Similarity=0.333  Sum_probs=62.7

Q ss_pred             CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------------hcccccCC
Q 034245           26 NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------------RCCLLSFG   84 (100)
Q Consensus        26 ~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------------~nil~~~~   84 (100)
                      +|||++++++.+.  +..++++||++ ++|.+++.... ++++..+..++.|++                  +|+++..+
T Consensus        67 ~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~  145 (267)
T PHA03390         67 DNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRA  145 (267)
T ss_pred             cCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCC
Confidence            7999999999988  88999999999 99999997764 589999998888876                  89999988


Q ss_pred             C-eEEEeecCCCCC
Q 034245           85 K-TVKVADLQALDW   97 (100)
Q Consensus        85 ~-~~ki~dfgl~~~   97 (100)
                      + .++++|||++..
T Consensus       146 ~~~~~l~dfg~~~~  159 (267)
T PHA03390        146 KDRIYLCDYGLCKI  159 (267)
T ss_pred             CCeEEEecCcccee
Confidence            7 999999998754

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.06  E-value=1.2e-09  Score=69.53  Aligned_cols=86  Identities=19%  Similarity=0.304  Sum_probs=69.2

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee----------------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHH
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS----------------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSS   73 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~----------------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~   73 (100)
                      +....+.+|+.++++++|||++++++.+.                ...++++||+++++...+...  .++...+..++.
T Consensus        44 ~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~l~~~~~~~~~~  121 (342)
T cd07854          44 QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLEQG--PLSEEHARLFMY  121 (342)
T ss_pred             chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEEEEeecccccHHHHHHcC--CCCHHHHHHHHH
Confidence            44566889999999999999999987655                247899999998888877543  378888888888


Q ss_pred             HhH------------------hccccc-CCCeEEEeecCCCCC
Q 034245           74 DSL------------------RCCLLS-FGKTVKVADLQALDW   97 (100)
Q Consensus        74 ~~~------------------~nil~~-~~~~~ki~dfgl~~~   97 (100)
                      |++                  +|++++ .++.+|++|||.+..
T Consensus       122 qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~~  164 (342)
T cd07854         122 QLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARI  164 (342)
T ss_pred             HHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCccccee
Confidence            865                  888997 456889999998753

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.06  E-value=1.1e-09  Score=66.24  Aligned_cols=81  Identities=14%  Similarity=0.124  Sum_probs=67.1

Q ss_pred             HHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------------
Q 034245           15 MIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------------   76 (100)
Q Consensus        15 ~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------------   76 (100)
                      ..+|...+....|||++++++.+.  ...++++||++ ++|.+.+..... +++..+..++.|++               
T Consensus        32 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-l~~~~~~~~~~ql~~~l~~lH~~~i~H~d  110 (237)
T cd05576          32 YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLN-IPEECVKRWAAEMVVALDALHREGIVCRD  110 (237)
T ss_pred             hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence            345555555667999999999888  88999999999 999998876543 88888888888765               


Q ss_pred             ---hcccccCCCeEEEeecCCCC
Q 034245           77 ---RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ---~nil~~~~~~~ki~dfgl~~   96 (100)
                         +|++++.++.++++|||.+.
T Consensus       111 lkp~Nil~~~~~~~~l~df~~~~  133 (237)
T cd05576         111 LNPNNILLDDRGHIQLTYFSRWS  133 (237)
T ss_pred             CCHHHEEEcCCCCEEEecccchh
Confidence               89999999999999999753

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.05  E-value=3.1e-09  Score=67.59  Aligned_cols=84  Identities=19%  Similarity=0.302  Sum_probs=67.3

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~------   76 (100)
                      ....+.+|+.+++.++|||++++.+.+.        ...++++|++..++.....   ..++...+..++.|++      
T Consensus        57 ~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~L  133 (342)
T cd07879          57 FAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQTDLQKIMG---HPLSEDKVQYLVYQMLCGLKYI  133 (342)
T ss_pred             chhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEEecccccCHHHHHc---CCCCHHHHHHHHHHHHHHHHHH
Confidence            3456889999999999999999999876        2358999998876666543   1377777777776654      


Q ss_pred             ------------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                  +||+++.++.+|++|||++..
T Consensus       134 H~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~  166 (342)
T cd07879         134 HSAGIIHRDLKPGNLAVNEDCELKILDFGLARH  166 (342)
T ss_pred             HHCCcccCCCCHHHEEECCCCCEEEeeCCCCcC
Confidence                        899999999999999998754

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.04  E-value=3.7e-09  Score=62.83  Aligned_cols=87  Identities=29%  Similarity=0.416  Sum_probs=72.3

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+..++.++|+|++++.+.+.  ...++++|+++ ++|.+++......++...+..+..+++           
T Consensus        40 ~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i  119 (225)
T smart00221       40 QREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGI  119 (225)
T ss_pred             HHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            4567889999999999999999999888  78999999999 799999876543267777766666654           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             .|++++.++.++++|||.+..
T Consensus       120 ~h~di~~~ni~v~~~~~~~l~d~g~~~~  147 (225)
T smart00221      120 VHRDLKPENILLGMDGLVKLADFGLARF  147 (225)
T ss_pred             ecCCCCHHHEEEcCCCCEEEeeCceeeE
Confidence                   899999999999999997753

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.04  E-value=2.1e-09  Score=64.33  Aligned_cols=85  Identities=34%  Similarity=0.435  Sum_probs=72.6

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+..++.++|+|++++.+.+.  ...++++|+++ ++|..++..... ++...+..++.+++            
T Consensus        31 ~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~~~i~  109 (244)
T smart00220       31 RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRGR-LSEDEARFYARQILSALEYLHSNGII  109 (244)
T ss_pred             HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhccC-CCHHHHHHHHHHHHHHHHHHHHcCee
Confidence            567889999999999999999999988  88899999999 799999876543 67777777766654            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +|++++.++.++++|||.+..
T Consensus       110 h~~i~~~ni~~~~~~~~~l~d~~~~~~  136 (244)
T smart00220      110 HRDLKPENILLDEDGHVKLADFGLARQ  136 (244)
T ss_pred             cCCcCHHHeEECCCCcEEEccccceee
Confidence                  899999999999999998754

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.03  E-value=1.3e-10  Score=75.48  Aligned_cols=80  Identities=19%  Similarity=0.264  Sum_probs=66.0

Q ss_pred             HHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------------
Q 034245           16 IREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------------   76 (100)
Q Consensus        16 ~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------------   76 (100)
                      +-|-++|..- +-|.+++++..|.  +++|+||||+. |+|...+...+. +.++.+.+++..++               
T Consensus       397 m~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ~Gk-FKEp~AvFYAaEiaigLFFLh~kgIiYRD  475 (683)
T KOG0696|consen  397 MVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGK-FKEPVAVFYAAEIAIGLFFLHSKGIIYRD  475 (683)
T ss_pred             ehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEecCchhhhHHHHhcc-cCCchhhhhhHHHHHHhhhhhcCCeeeee
Confidence            3466666655 5678899988888  99999999999 999888876654 88888887777655               


Q ss_pred             ---hcccccCCCeEEEeecCCCC
Q 034245           77 ---RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ---~nil~~~~~~~ki~dfgl~~   96 (100)
                         +|++++.+|++||+|||...
T Consensus       476 LKLDNvmLd~eGHiKi~DFGmcK  498 (683)
T KOG0696|consen  476 LKLDNVMLDSEGHIKIADFGMCK  498 (683)
T ss_pred             ccccceEeccCCceEeeeccccc
Confidence               99999999999999999863

>PRK10345 hypothetical protein; Provisional

Probab=99.03  E-value=3.9e-09  Score=63.43  Aligned_cols=82  Identities=12%  Similarity=0.085  Sum_probs=57.9

Q ss_pred             chhhHHHHHHHHhhC-----CCCcceeeeeeee-c----cEE-EEEec--cc-ccHHHHhccCCCCCCHHH--HHHHHHH
Q 034245           11 VPSSMIREVSCLMEL-----NHPNIIRLMLVVS-Q----GLC-LFLEY--QA-NDLAYLLKYPKDSMDGYS--IKFSSSD   74 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l-----~h~~iv~l~~~~~-~----~~~-lv~e~--~~-~~l~~~l~~~~~~~~~~~--~~~~~~~   74 (100)
                      ....+.+|+..++.+     +||||++++++++ +    .++ +++||  ++ ++|.++++...  +++..  ......+
T Consensus        39 ~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~~--~~e~~~~~~~~L~~  116 (210)
T PRK10345         39 GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQCR--YEEDVAQLRQLLKK  116 (210)
T ss_pred             hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHccc--ccHhHHHHHHHHHH
Confidence            346789999999999     5799999999999 3    334 78999  66 89999997642  44431  1111111


Q ss_pred             hH---------------hcccccC----CCeEEEee-cCC
Q 034245           75 SL---------------RCCLLSF----GKTVKVAD-LQA   94 (100)
Q Consensus        75 ~~---------------~nil~~~----~~~~ki~d-fgl   94 (100)
                      +.               +||++..    ++.++|+| ||.
T Consensus       117 l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345        117 LKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             HHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence            11               9999974    34899999 554

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.01  E-value=5.5e-11  Score=78.51  Aligned_cols=92  Identities=18%  Similarity=0.201  Sum_probs=77.3

Q ss_pred             CCCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------
Q 034245            7 TMEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------   76 (100)
                      -+.++.+.+..|-.++.+.++|.||+++-.|.  ..+|+.+|-|- |+++..+++.+. +.....++++.-++       
T Consensus       459 VdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGGElWTiLrdRg~-Fdd~tarF~~acv~EAfeYLH  537 (732)
T KOG0614|consen  459 VDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGGELWTILRDRGS-FDDYTARFYVACVLEAFEYLH  537 (732)
T ss_pred             cchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCchhhhhhhhcCC-cccchhhhhHHHHHHHHHHHH
Confidence            34555567788999999999999999999998  88999999998 999999998775 77777766654333       


Q ss_pred             -----------hcccccCCCeEEEeecCCCCCCC
Q 034245           77 -----------RCCLLSFGKTVKVADLQALDWPS   99 (100)
Q Consensus        77 -----------~nil~~~~~~~ki~dfgl~~~~~   99 (100)
                                 +|++++.+|.+|+.|||+|...+
T Consensus       538 ~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~  571 (732)
T KOG0614|consen  538 RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIG  571 (732)
T ss_pred             hcCceeccCChhheeeccCCceEEeehhhHHHhc
Confidence                       89999999999999999997654

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.00  E-value=5.1e-09  Score=64.82  Aligned_cols=85  Identities=12%  Similarity=0.148  Sum_probs=65.2

Q ss_pred             hhhHHHHHHHHhhCC-CCcceeeeeeee--ccEEEEEecccccHHHH---hcc-CCCCCCHHHHHHHHHHhH--------
Q 034245           12 PSSMIREVSCLMELN-HPNIIRLMLVVS--QGLCLFLEYQANDLAYL---LKY-PKDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~-h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~---l~~-~~~~~~~~~~~~~~~~~~--------   76 (100)
                      ...+.+|+..+.++. |+|++++++.+.  +..++++|++..++..+   +.. ....+++..+..++.|++        
T Consensus        46 ~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~  125 (288)
T cd06616          46 QKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE  125 (288)
T ss_pred             HHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            456788999999985 999999999888  78889999987544433   221 123477777777666644        


Q ss_pred             -----------hcccccCCCeEEEeecCCCC
Q 034245           77 -----------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -----------~nil~~~~~~~ki~dfgl~~   96 (100)
                                 +|++++.++.+|++|||++.
T Consensus       126 ~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~  156 (288)
T cd06616         126 ELKIIHRDVKPSNILLDRNGNIKLCDFGISG  156 (288)
T ss_pred             cCCeeccCCCHHHEEEccCCcEEEeecchhH
Confidence                       88999999999999999874

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=98.97  E-value=1.1e-09  Score=71.60  Aligned_cols=84  Identities=18%  Similarity=0.144  Sum_probs=67.1

Q ss_pred             hhhHHHHHHHHh--hCCCCcceeeeeeee------ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHH----hH--
Q 034245           12 PSSMIREVSCLM--ELNHPNIIRLMLVVS------QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSD----SL--   76 (100)
Q Consensus        12 ~~~~~~e~~~l~--~l~h~~iv~l~~~~~------~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~----~~--   76 (100)
                      .++|..|-.+.+  .++|+||+++++.-.      ...++|++|.+ |+|.++++.+.  .++.....+...    ++  
T Consensus       246 kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~nt--isw~~~cria~SmarGLa~L  323 (534)
T KOG3653|consen  246 KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKANT--ISWNSLCRIAESMARGLAHL  323 (534)
T ss_pred             HHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCCcHHHHHHhcc--ccHHHHHHHHHHHHHHHHHh
Confidence            456776666554  468999999988766      37899999999 99999999875  577766555443    33  


Q ss_pred             ---------------------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                           +|+++..++..-|+|||+|.+
T Consensus       324 Hee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~  365 (534)
T KOG3653|consen  324 HEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALR  365 (534)
T ss_pred             cccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEE
Confidence                                 899999999999999999865

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.95  E-value=2e-08  Score=58.59  Aligned_cols=85  Identities=32%  Similarity=0.384  Sum_probs=72.4

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+..++.++|++++++.+.+.  ...++++|+++ +++..++......++...+..++.+++            
T Consensus        35 ~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~  114 (215)
T cd00180          35 LEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGII  114 (215)
T ss_pred             HHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            457889999999999999999999988  78999999999 999999876533377777777776654            


Q ss_pred             ------hcccccC-CCeEEEeecCCCC
Q 034245           77 ------RCCLLSF-GKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~-~~~~ki~dfgl~~   96 (100)
                            .|+++.. ++.++++|||.+.
T Consensus       115 H~dl~~~ni~~~~~~~~~~l~d~~~~~  141 (215)
T cd00180         115 HRDLKPENILLDSDNGKVKLADFGLSK  141 (215)
T ss_pred             ccCCCHhhEEEeCCCCcEEEecCCceE
Confidence                  8999998 8999999999775

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=98.90  E-value=7.6e-10  Score=69.38  Aligned_cols=84  Identities=23%  Similarity=0.288  Sum_probs=70.3

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------   76 (100)
                      ..++.||..++..++|+|+++++++|.        ..+|+++|++..++.+.+...   ++...+..+..|.+       
T Consensus        59 akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~~nl~~vi~~e---lDH~tis~i~yq~~~~ik~lh  135 (369)
T KOG0665|consen   59 AKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMDANLCQVILME---LDHETISYILYQMLCGIKHLH  135 (369)
T ss_pred             chhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhhhHHHHHHHHh---cchHHHHHHHHHHHHHHHHHH
Confidence            456889999999999999999999987        567999999998888877632   56667777777754       


Q ss_pred             -----------hcccccCCCeEEEeecCCCCCC
Q 034245           77 -----------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 -----------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                                 .|+++..++.+|+.|||+|...
T Consensus       136 s~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e  168 (369)
T KOG0665|consen  136 SAGIIHRDLKPSNIVVNSDCTLKILDFGLARTE  168 (369)
T ss_pred             hcceeecccCcccceecchhheeeccchhhccc
Confidence                       7999999999999999998653

>PTZ00284 protein kinase; Provisional

Probab=98.90  E-value=1.8e-08  Score=66.63  Aligned_cols=84  Identities=8%  Similarity=0.083  Sum_probs=63.4

Q ss_pred             hhHHHHHHHHhhCCCC------cceeeeeeee---ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------
Q 034245           13 SSMIREVSCLMELNHP------NIIRLMLVVS---QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~------~iv~l~~~~~---~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------   76 (100)
                      ....+|+.+++.++|.      +++.+.+.+.   ...+++++++.+++.+++.... .+++..+..++.|++       
T Consensus       170 ~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~g~~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~yLH  248 (467)
T PTZ00284        170 RDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKYGPCLLDWIMKHG-PFSHRHLAQIIFQTGVALDYFH  248 (467)
T ss_pred             HHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEeccCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            3456677777776544      5777877776   5688999988888888887654 388888888877765       


Q ss_pred             ------------hcccccCCC----------------eEEEeecCCCCC
Q 034245           77 ------------RCCLLSFGK----------------TVKVADLQALDW   97 (100)
Q Consensus        77 ------------~nil~~~~~----------------~~ki~dfgl~~~   97 (100)
                                  +||++...+                .+||+|||.+..
T Consensus       249 ~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~  297 (467)
T PTZ00284        249 TELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCD  297 (467)
T ss_pred             hcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCcccc
Confidence                        888987654                599999998754

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=98.89  E-value=8.5e-10  Score=68.35  Aligned_cols=91  Identities=13%  Similarity=0.141  Sum_probs=68.0

Q ss_pred             CCCcchhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------
Q 034245            7 TMEEVPSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------   76 (100)
                      ...+..+++++.+.+..+- +.|.||+.+|.|.  ..+++.||.+.....++++...+++++.-+-.+...+.       
T Consensus       129 ~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLK  208 (391)
T KOG0983|consen  129 GNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLK  208 (391)
T ss_pred             CCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHH
Confidence            3444567899999876665 5999999999998  77888899888666666666555566554433322211       


Q ss_pred             ------------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                  .||+++..|.+|++|||++..
T Consensus       209 eKH~viHRDvKPSNILlDe~GniKlCDFGIsGr  241 (391)
T KOG0983|consen  209 EKHGVIHRDVKPSNILLDERGNIKLCDFGISGR  241 (391)
T ss_pred             HhcceeecccCccceEEccCCCEEeecccccce
Confidence                        899999999999999999864

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.88  E-value=1.2e-08  Score=60.33  Aligned_cols=82  Identities=11%  Similarity=0.011  Sum_probs=55.7

Q ss_pred             HHHHHHHhhCCCCcceeeeeeeeccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------------
Q 034245           16 IREVSCLMELNHPNIIRLMLVVSQGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------------   76 (100)
Q Consensus        16 ~~e~~~l~~l~h~~iv~l~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------------   76 (100)
                      .+|+..+..+.++++...........+++|||++ +++....... .+++...+..+..|++                  
T Consensus        67 ~~E~~~l~~l~~~~v~~p~~~~~~~~~iVmE~i~g~~l~~~~~~~-~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlk  145 (190)
T cd05147          67 EKEMRNLKRLVTAGIPCPEPILLKSHVLVMEFIGDDGWAAPRLKD-APLSESKARELYLQVIQIMRILYQDCRLVHADLS  145 (190)
T ss_pred             HHHHHHHHHHHHCCCCCCcEEEecCCEEEEEEeCCCCCcchhhhc-CCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            4599999999877764433222234489999999 5554332222 2477777766665543                  


Q ss_pred             -hcccccCCCeEEEeecCCCCCCC
Q 034245           77 -RCCLLSFGKTVKVADLQALDWPS   99 (100)
Q Consensus        77 -~nil~~~~~~~ki~dfgl~~~~~   99 (100)
                       +|++++ ++.++++|||+|...+
T Consensus       146 P~NIli~-~~~v~LiDFG~a~~~~  168 (190)
T cd05147         146 EYNLLYH-DGKLYIIDVSQSVEHD  168 (190)
T ss_pred             HHHEEEE-CCcEEEEEccccccCC
Confidence             899998 5789999999997544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=98.88  E-value=5.8e-09  Score=62.44  Aligned_cols=85  Identities=9%  Similarity=0.218  Sum_probs=62.6

Q ss_pred             hhHHHHHHHHhh-CCCCcceeeeeeee--ccEEEEEecccccHHHHhcc---CCCCCCHHHHHHHHHHhH----------
Q 034245           13 SSMIREVSCLME-LNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKY---PKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~-l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~---~~~~~~~~~~~~~~~~~~----------   76 (100)
                      ...++|+.+... ...|.+|+++|.+.  ..+|+.||.++.++..+-+.   .+...++..+-.++..+.          
T Consensus        89 ~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL  168 (282)
T KOG0984|consen   89 KRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL  168 (282)
T ss_pred             HHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh
Confidence            456778876544 58999999999887  99999999998777666442   333355555444332221          


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               .|++++..|.+|++|||++..
T Consensus       169 ~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~  198 (282)
T KOG0984|consen  169 SVIHRDVKPSNILINYDGQVKICDFGISGY  198 (282)
T ss_pred             hhhhccCCcceEEEccCCcEEEccccccee
Confidence                     899999999999999999864

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.87  E-value=1.3e-08  Score=65.66  Aligned_cols=81  Identities=14%  Similarity=0.064  Sum_probs=54.6

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeeeccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHH-------------h--
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSD-------------S--   75 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~-------------~--   75 (100)
                      ...+.+|+.+++.++|+|++.....+ +..|++|||++ ++|... ....   .......++..             +  
T Consensus        65 ~~~~~~E~~iL~~L~h~~iv~~l~~~-~~~~LVmE~~~G~~L~~~-~~~~---~~~~~~~i~~aL~~lH~~gIiHrDL~K  139 (365)
T PRK09188         65 RHLAAREIRALKTVRGIGVVPQLLAT-GKDGLVRGWTEGVPLHLA-RPHG---DPAWFRSAHRALRDLHRAGITHNDLAK  139 (365)
T ss_pred             HHHHHHHHHHHHhccCCCCCcEEEEc-CCcEEEEEccCCCCHHHh-Cccc---hHHHHHHHHHHHHHHHHCCCeeCCCCC
Confidence            45689999999999999998533222 67899999999 777632 1111   11111111111             1  


Q ss_pred             HhcccccCCCeEEEeecCCCCC
Q 034245           76 LRCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        76 ~~nil~~~~~~~ki~dfgl~~~   97 (100)
                      -+|++++.++.+||+|||+|..
T Consensus       140 P~NILv~~~~~ikLiDFGlA~~  161 (365)
T PRK09188        140 PQNWLMGPDGEAAVIDFQLASV  161 (365)
T ss_pred             cceEEEcCCCCEEEEECcccee
Confidence            1699998889999999999874

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.86  E-value=2.7e-10  Score=70.65  Aligned_cols=85  Identities=19%  Similarity=0.249  Sum_probs=69.9

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee-------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS-------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~-------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      ..+-||+++|.-++|.|+....++..       ..+|+++|.+..+|.+.+-+ +++++...++.+..|++         
T Consensus        97 krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TELmQSDLHKIIVS-PQ~Ls~DHvKVFlYQILRGLKYLHsA  175 (449)
T KOG0664|consen   97 KRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTELMQSDLHKIIVS-PQALTPDHVKVFVYQILRGLKYLHTA  175 (449)
T ss_pred             HHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHHHHhhhhheecc-CCCCCcchhhhhHHHHHhhhHHHhhc
Confidence            35678999999999999999888776       45678888887888877654 34588899888888877         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                               -|+++++++..||+|||+|...
T Consensus       176 ~ILHRDIKPGNLLVNSNCvLKICDFGLARve  206 (449)
T KOG0664|consen  176 NILHRDIKPGNLLVNSNCILKICDFGLARTW  206 (449)
T ss_pred             chhhccCCCccEEeccCceEEeccccccccc
Confidence                     6889999999999999999753

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.82  E-value=8.5e-09  Score=65.76  Aligned_cols=83  Identities=18%  Similarity=0.266  Sum_probs=69.9

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      .-+...|-.+..+. +||.+|.++..|.  +.+++|.||.+ |+|.-.+..++. +++..++++...+.           
T Consensus       294 idwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv~ggdlmfhmqrqrk-lpeeharfys~ei~lal~flh~rgi  372 (593)
T KOG0695|consen  294 IDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEICLALNFLHERGI  372 (593)
T ss_pred             chhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEecCcceeeehhhhhc-CcHHHhhhhhHHHHHHHHHHhhcCe
Confidence            45566777777776 7999999999888  99999999999 999877776654 89999888866643           


Q ss_pred             -------hcccccCCCeEEEeecCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQAL   95 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~   95 (100)
                             +|++++.+|.+|+.|+|..
T Consensus       373 iyrdlkldnvlldaeghikltdygmc  398 (593)
T KOG0695|consen  373 IYRDLKLDNVLLDAEGHIKLTDYGMC  398 (593)
T ss_pred             eeeeccccceEEccCCceeecccchh
Confidence                   8999999999999999975

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=98.79  E-value=4.3e-08  Score=57.92  Aligned_cols=82  Identities=11%  Similarity=0.009  Sum_probs=56.6

Q ss_pred             HHHHHHHHhhCCCCcceeeeeeeeccEEEEEeccc-ccHHH-HhccCCCCCCHHHHHHHHHHhH----------------
Q 034245           15 MIREVSCLMELNHPNIIRLMLVVSQGLCLFLEYQA-NDLAY-LLKYPKDSMDGYSIKFSSSDSL----------------   76 (100)
Q Consensus        15 ~~~e~~~l~~l~h~~iv~l~~~~~~~~~lv~e~~~-~~l~~-~l~~~~~~~~~~~~~~~~~~~~----------------   76 (100)
                      ..+|...+.++.++++...........+++|||++ +++.. .+..  .+++......+..|++                
T Consensus        66 ~~~E~~~l~~l~~~~i~~p~~~~~~~~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH~~~givHrD  143 (190)
T cd05145          66 AEKEFRNLKRLYEAGVPVPEPILLKKNVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGD  143 (190)
T ss_pred             HHHHHHHHHHHHhCCCCCceEEEecCCEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence            45789999999888875544333333589999999 53333 2332  2366666666655544                


Q ss_pred             ---hcccccCCCeEEEeecCCCCCCC
Q 034245           77 ---RCCLLSFGKTVKVADLQALDWPS   99 (100)
Q Consensus        77 ---~nil~~~~~~~ki~dfgl~~~~~   99 (100)
                         +|++++ ++.++++|||++....
T Consensus       144 lkP~NIll~-~~~~~liDFG~a~~~~  168 (190)
T cd05145         144 LSEYNILYH-DGKPYIIDVSQAVELD  168 (190)
T ss_pred             CChhhEEEE-CCCEEEEEcccceecC
Confidence               799998 8899999999997654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=98.70  E-value=3.2e-08  Score=61.46  Aligned_cols=86  Identities=19%  Similarity=0.135  Sum_probs=64.7

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee---ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS---QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~---~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      ..+|.||...--.+ .|.||+.-+++-.   +..++++||+| |+|..-+...+  +.+.....+..|++          
T Consensus        64 ~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~~G--igE~~~K~v~~ql~SAi~fMHskn  141 (378)
T KOG1345|consen   64 QADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEAAG--IGEANTKKVFAQLLSAIEFMHSKN  141 (378)
T ss_pred             HHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCccchhhhhcCccc--ccHHHHHHHHHHHHHHHHHhhccc
Confidence            35677887654444 5889998776644   77789999999 99999887654  66777777776655          


Q ss_pred             --------hccccc--CCCeEEEeecCCCCCCC
Q 034245           77 --------RCCLLS--FGKTVKVADLQALDWPS   99 (100)
Q Consensus        77 --------~nil~~--~~~~~ki~dfgl~~~~~   99 (100)
                              +||++-  ...++|++|||+....|
T Consensus       142 lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g  174 (378)
T KOG1345|consen  142 LVHRDLKAENILIFDADFYRVKLCDFGLTRKVG  174 (378)
T ss_pred             hhhcccccceEEEecCCccEEEeeecccccccC
Confidence                    888884  45699999999987654

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=98.69  E-value=1.6e-07  Score=66.80  Aligned_cols=71  Identities=18%  Similarity=0.259  Sum_probs=58.3

Q ss_pred             HHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------------
Q 034245           16 IREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------------   76 (100)
Q Consensus        16 ~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------------   76 (100)
                      .+|++.+++++||||+++++++.  ...++++||++ ++|.++++.    +++.....++.|++                
T Consensus       731 ~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH  806 (968)
T PLN00113        731 SSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN----LSWERRRKIAIGIAKALRFLHCRCSPAVVV  806 (968)
T ss_pred             HHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc----CCHHHHHHHHHHHHHHHHHhccCCCCCeec
Confidence            45788899999999999999998  88899999999 999999863    67777777777755                


Q ss_pred             -----hcccccCCCeEEEe
Q 034245           77 -----RCCLLSFGKTVKVA   90 (100)
Q Consensus        77 -----~nil~~~~~~~ki~   90 (100)
                           +|++++.++..++.
T Consensus       807 ~dlkp~Nil~~~~~~~~~~  825 (968)
T PLN00113        807 GNLSPEKIIIDGKDEPHLR  825 (968)
T ss_pred             CCCCHHhEEECCCCceEEE
Confidence                 68888877766654

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.69  E-value=4.2e-08  Score=66.02  Aligned_cols=81  Identities=14%  Similarity=0.159  Sum_probs=64.4

Q ss_pred             HHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH--------------
Q 034245           15 MIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL--------------   76 (100)
Q Consensus        15 ~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~--------------   76 (100)
                      ..+|+.++... +|||++++.+++.  ...|+++|.+. +.+.+.+.+.+. +. ..+..|++++.              
T Consensus       362 ~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~~-~~-~e~~~w~~~lv~Av~~LH~~gvvhR  439 (612)
T KOG0603|consen  362 NQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRSKPE-FC-SEASQWAAELVSAVDYLHEQGVVHR  439 (612)
T ss_pred             cccccchhhhhcCCCcceeecceecCCceeeeeehhccccHHHHHHHhcch-hH-HHHHHHHHHHHHHHHHHHhcCeeec
Confidence            55677655554 8999999999999  88999999999 888888777654 33 55556666654              


Q ss_pred             ----hcccc-cCCCeEEEeecCCCCC
Q 034245           77 ----RCCLL-SFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----~nil~-~~~~~~ki~dfgl~~~   97 (100)
                          .||++ +..+.++++|||.++-
T Consensus       440 DLkp~NIL~~~~~g~lrltyFG~a~~  465 (612)
T KOG0603|consen  440 DLKPGNILLDGSAGHLRLTYFGFWSE  465 (612)
T ss_pred             CCChhheeecCCCCcEEEEEechhhh
Confidence                89999 5899999999999863

>PHA02882 putative serine/threonine kinase; Provisional

Probab=98.68  E-value=3e-07  Score=57.44  Aligned_cols=78  Identities=15%  Similarity=0.053  Sum_probs=56.2

Q ss_pred             HHHHhhCCCCcceeeeeeee------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH----------------
Q 034245           19 VSCLMELNHPNIIRLMLVVS------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL----------------   76 (100)
Q Consensus        19 ~~~l~~l~h~~iv~l~~~~~------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~----------------   76 (100)
                      ...+..++|++++++++.+.      ...+++++++...+.+.+.... ..+...+..++.|++                
T Consensus        74 ~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDi  152 (294)
T PHA02882         74 WKNIHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRIK-CKNKKLIKNIMKDMLTTLEYIHEHGISHGDI  152 (294)
T ss_pred             HHHhccCCCCCCCcEEEeeeEecCCceEEEEEEehhccCHHHHHHhhc-cCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            34456678999999988665      2346677776655555554432 256777777777765                


Q ss_pred             --hcccccCCCeEEEeecCCCCC
Q 034245           77 --RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --~nil~~~~~~~ki~dfgl~~~   97 (100)
                        +|++++.++.++++|||+|..
T Consensus       153 Kp~Nill~~~~~~~l~DFGla~~  175 (294)
T PHA02882        153 KPENIMVDGNNRGYIIDYGIASH  175 (294)
T ss_pred             CHHHEEEcCCCcEEEEEcCCcee
Confidence              899999999999999999853

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=98.66  E-value=6.7e-09  Score=64.18  Aligned_cols=88  Identities=20%  Similarity=0.208  Sum_probs=60.8

Q ss_pred             CcchhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEecccccHHHHhccC----CCCCCHHHHHHH----------
Q 034245            9 EEVPSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYP----KDSMDGYSIKFS----------   71 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~----~~~~~~~~~~~~----------   71 (100)
                      ++...++++|.....+- +.|+||+++|.+.  +..|+.||.++.++..+.+.-    ....++.-+..+          
T Consensus       103 ~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~y  182 (361)
T KOG1006|consen  103 EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDY  182 (361)
T ss_pred             hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHH
Confidence            34456788888866655 7999999999987  999999999985555543321    011333222111          


Q ss_pred             --------HHHhH-hcccccCCCeEEEeecCCCC
Q 034245           72 --------SSDSL-RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        72 --------~~~~~-~nil~~~~~~~ki~dfgl~~   96 (100)
                              ++++- .||+++..|.+|++|||++.
T Consensus       183 LK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcG  216 (361)
T KOG1006|consen  183 LKEELKIIHRDVKPSNILLDRHGDVKLCDFGICG  216 (361)
T ss_pred             HHHHhhhhhccCChhheEEecCCCEeeecccchH
Confidence                    11111 89999999999999999875

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=98.65  E-value=2.9e-08  Score=60.42  Aligned_cols=80  Identities=24%  Similarity=0.438  Sum_probs=63.3

Q ss_pred             hhhHHHHHHHHhhCC-CCcceeeeeeee----ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245           12 PSSMIREVSCLMELN-HPNIIRLMLVVS----QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~-h~~iv~l~~~~~----~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      ...+.||+.+|..+. +|||+++.++..    ....+++|+.. .+......    .++...++.++.+++         
T Consensus        76 kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~----tl~d~dIryY~~elLkALdyCHS~  151 (338)
T KOG0668|consen   76 KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLYP----TLTDYDIRYYIYELLKALDYCHSM  151 (338)
T ss_pred             HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhccccHHHHhh----hhchhhHHHHHHHHHHHHhHHHhc
Confidence            356889999999995 999999999988    66789999998 55444432    266667777777755         


Q ss_pred             ---------hcccccC-CCeEEEeecCCC
Q 034245           77 ---------RCCLLSF-GKTVKVADLQAL   95 (100)
Q Consensus        77 ---------~nil~~~-~~~~ki~dfgl~   95 (100)
                               .|++++. ...++++|+|+|
T Consensus       152 GImHRDVKPhNvmIdh~~rkLrlIDWGLA  180 (338)
T KOG0668|consen  152 GIMHRDVKPHNVMIDHELRKLRLIDWGLA  180 (338)
T ss_pred             CcccccCCcceeeechhhceeeeeecchH
Confidence                     7899985 468999999997

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=98.63  E-value=3.6e-08  Score=65.78  Aligned_cols=86  Identities=19%  Similarity=0.262  Sum_probs=68.2

Q ss_pred             hhHHHHHHHHhhCC------CCcceeeeeeee--ccEEEEEecccccHHHHhccCCC--CCCHHHHHHHHHHhH------
Q 034245           13 SSMIREVSCLMELN------HPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKD--SMDGYSIKFSSSDSL------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~------h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~~------   76 (100)
                      ..=++|+++|+++.      --|+++++-.|.  +++|+|+|-+.-.|...++..+.  ++....+..+..|+.      
T Consensus       473 KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklL  552 (752)
T KOG0670|consen  473 KTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLL  552 (752)
T ss_pred             hhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHH
Confidence            44567999999984      237899988888  99999999988888888887653  367777777777743      


Q ss_pred             ------------hccccc-CCCeEEEeecCCCCCC
Q 034245           77 ------------RCCLLS-FGKTVKVADLQALDWP   98 (100)
Q Consensus        77 ------------~nil~~-~~~~~ki~dfgl~~~~   98 (100)
                                  +|||+. ....+||+|||-|+-.
T Consensus       553 K~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~  587 (752)
T KOG0670|consen  553 KKCGVLHADIKPDNILVNESKNILKLCDFGSASFA  587 (752)
T ss_pred             HhcCeeecccCccceEeccCcceeeeccCcccccc
Confidence                        899998 4568899999988754

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=98.61  E-value=1.5e-07  Score=65.35  Aligned_cols=86  Identities=24%  Similarity=0.189  Sum_probs=62.5

Q ss_pred             hhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCC-------CHHHHHHHHHHhH------
Q 034245           13 SSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSM-------DGYSIKFSSSDSL------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~-------~~~~~~~~~~~~~------   76 (100)
                      .-+.||+.+|..- +|||+|++++.=.  .+.|+..|.|..+|.+++......+       +......++.+++      
T Consensus       547 ~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~  626 (903)
T KOG1027|consen  547 DFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK  626 (903)
T ss_pred             HHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc
Confidence            3578999999887 6999999998766  8899999999999999987741111       1222222222232      


Q ss_pred             --------hcccccC---C--CeEEEeecCCCCCC
Q 034245           77 --------RCCLLSF---G--KTVKVADLQALDWP   98 (100)
Q Consensus        77 --------~nil~~~---~--~~~ki~dfgl~~~~   98 (100)
                              .||+++.   +  ..++|+|||++...
T Consensus       627 iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl  661 (903)
T KOG1027|consen  627 IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL  661 (903)
T ss_pred             cccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence                    8999986   2  47899999998654

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.61  E-value=3.8e-07  Score=61.57  Aligned_cols=80  Identities=11%  Similarity=0.083  Sum_probs=57.7

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      +.+.+|+.+++.++|++++.....+.  ...++++||++ ++|.+.+...     ...+..+...+.             
T Consensus       381 ~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~~~-----~~~~~~i~~~L~~lH~~giiHrDlk  455 (535)
T PRK09605        381 ERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLEGN-----PELVRKVGEIVAKLHKAGIVHGDLT  455 (535)
T ss_pred             HHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHHHH-----HHHHHHHHHHHHHHHhCCCccCCCC
Confidence            45789999999999999887665554  67889999999 8888877511     111111111111             


Q ss_pred             -hcccccCCCeEEEeecCCCCCC
Q 034245           77 -RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 -~nil~~~~~~~ki~dfgl~~~~   98 (100)
                       +|+++ .++.++++|||++...
T Consensus       456 p~NILl-~~~~~~liDFGla~~~  477 (535)
T PRK09605        456 TSNFIV-RDDRLYLIDFGLGKYS  477 (535)
T ss_pred             hHHEEE-ECCcEEEEeCcccccC
Confidence             89999 6788999999998754

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.60  E-value=3.3e-07  Score=61.48  Aligned_cols=82  Identities=17%  Similarity=0.105  Sum_probs=57.4

Q ss_pred             HHHHHHHHhhCCCCcc-----eeeeeeee----------ccEEEEEeccc-ccHHHHhccCCCC----------------
Q 034245           15 MIREVSCLMELNHPNI-----IRLMLVVS----------QGLCLFLEYQA-NDLAYLLKYPKDS----------------   62 (100)
Q Consensus        15 ~~~e~~~l~~l~h~~i-----v~l~~~~~----------~~~~lv~e~~~-~~l~~~l~~~~~~----------------   62 (100)
                      ...|+..+.+++|.++     +++.+.|.          +..++|+||++ ++|.+.+......                
T Consensus       219 ~~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~  298 (507)
T PLN03224        219 GMVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIP  298 (507)
T ss_pred             hHHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchh
Confidence            4457777777766554     44444432          46799999999 9999888643211                


Q ss_pred             -------CCHHHHHHHHHHhH------------------hcccccCCCeEEEeecCCCC
Q 034245           63 -------MDGYSIKFSSSDSL------------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        63 -------~~~~~~~~~~~~~~------------------~nil~~~~~~~ki~dfgl~~   96 (100)
                             +++..+..++.|++                  +|++++.++.+|++|||++.
T Consensus       299 ~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~  357 (507)
T PLN03224        299 DNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAV  357 (507)
T ss_pred             hhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCcc
Confidence                   23445555666654                  89999999999999999984

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=98.59  E-value=1.2e-07  Score=62.97  Aligned_cols=77  Identities=19%  Similarity=0.225  Sum_probs=65.0

Q ss_pred             HhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------------------hcc
Q 034245           22 LMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------------------RCC   79 (100)
Q Consensus        22 l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------------~ni   79 (100)
                      |+.+.|.|+.++.|.+.  +..+.+.+||. |+|.+.+......+++.....+.+++.                   .|+
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC   80 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC   80 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence            35689999999999999  88899999999 999999998766677666666655544                   899


Q ss_pred             cccCCCeEEEeecCCCCCC
Q 034245           80 LLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        80 l~~~~~~~ki~dfgl~~~~   98 (100)
                      +++..+.+|++|||+....
T Consensus        81 lvd~~w~lklt~~Gl~~~~   99 (484)
T KOG1023|consen   81 LVDSRWVLKLTDFGLNSLL   99 (484)
T ss_pred             eeeeeEEEEechhhhcccc
Confidence            9999999999999987653

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.56  E-value=4.7e-07  Score=53.92  Aligned_cols=80  Identities=14%  Similarity=0.137  Sum_probs=58.6

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ..+.+|+..+..+.|+++......+.  ...++++||++ +++.+.+....    . ....+..+++             
T Consensus        44 ~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH~~~i~H  118 (211)
T PRK14879         44 ERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINSNG----M-EELELSREIGRLVGKLHSAGIIH  118 (211)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHHhCCccc
Confidence            35778999999999988877666655  77889999999 88888875432    1 2222333322             


Q ss_pred             -----hcccccCCCeEEEeecCCCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~~~   98 (100)
                           .|+++. ++.++++|||.+...
T Consensus       119 ~Dl~p~Nil~~-~~~~~liDf~~a~~~  144 (211)
T PRK14879        119 GDLTTSNMILS-GGKIYLIDFGLAEFS  144 (211)
T ss_pred             CCCCcccEEEE-CCCEEEEECCcccCC
Confidence                 899998 788999999988653

>PRK12274 serine/threonine protein kinase; Provisional

Probab=98.51  E-value=9.9e-07  Score=53.16  Aligned_cols=81  Identities=19%  Similarity=0.049  Sum_probs=53.2

Q ss_pred             hHHHHHHHHhhCC-CCcceeeeeeeeccEEEEEeccc-ccHHHHhccCCCCCC-HHHHHHHHHH----------hH--hc
Q 034245           14 SMIREVSCLMELN-HPNIIRLMLVVSQGLCLFLEYQA-NDLAYLLKYPKDSMD-GYSIKFSSSD----------SL--RC   78 (100)
Q Consensus        14 ~~~~e~~~l~~l~-h~~iv~l~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~-~~~~~~~~~~----------~~--~n   78 (100)
                      .+.+|+++++.++ ++++.++.+.  +..++++||+. .+|.+.....  ... ..++.....+          +.  .|
T Consensus        47 l~~rE~~iL~~L~~~~~vP~ll~~--~~~~lvmeyI~G~~L~~~~~~~--~~~~~~qi~~~L~~lH~~GIvHrDL~kp~N  122 (218)
T PRK12274         47 LARREALALRQLDGLPRTPRLLHW--DGRHLDRSYLAGAAMYQRPPRG--DLAYFRAARRLLQQLHRCGVAHNDLAKEAN  122 (218)
T ss_pred             HHHHHHHHHHhcCCCCCCCEEEEE--cCEEEEEeeecCccHHhhhhhh--hHHHHHHHHHHHHHHHHCcCccCCCCCcce
Confidence            4789999999995 5778887664  45789999999 6676543211  111 0011111111          10  69


Q ss_pred             ccccCCCeEEEeecCCCCCC
Q 034245           79 CLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        79 il~~~~~~~ki~dfgl~~~~   98 (100)
                      ++++.++.++++|||+|...
T Consensus       123 ILv~~~g~i~LIDFG~A~~~  142 (218)
T PRK12274        123 WLVQEDGSPAVIDFQLAVRG  142 (218)
T ss_pred             EEEcCCCCEEEEECCCceec
Confidence            99999999999999999743

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.48  E-value=2.3e-06  Score=52.40  Aligned_cols=84  Identities=14%  Similarity=0.080  Sum_probs=59.5

Q ss_pred             hhhHHHHHHHHhhCCCCcc--eeeeeeee------ccEEEEEeccc--ccHHHHhccCCCCCCHHHHHHHHHHhH-----
Q 034245           12 PSSMIREVSCLMELNHPNI--IRLMLVVS------QGLCLFLEYQA--NDLAYLLKYPKDSMDGYSIKFSSSDSL-----   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~i--v~l~~~~~------~~~~lv~e~~~--~~l~~~l~~~~~~~~~~~~~~~~~~~~-----   76 (100)
                      ...+.+|+.++..+.|+++  ....+...      ...++++|+++  .++.+.+...  +++......+...+.     
T Consensus        84 ~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~--~l~~~~~~~i~~~l~~lH~~  161 (239)
T PRK01723         84 RTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQEA--PLSEEQWQAIGQLIARFHDA  161 (239)
T ss_pred             hhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHC
Confidence            3568899999999988775  55555433      23459999998  4788887653  255555444433322     


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               .|++++.++.++++|||.+..
T Consensus       162 GI~HrDlkp~NILv~~~~~v~LIDfg~~~~  191 (239)
T PRK01723        162 GVYHADLNAHNILLDPDGKFWLIDFDRGEL  191 (239)
T ss_pred             CCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence                     899999888999999998764

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.42  E-value=7.3e-07  Score=59.12  Aligned_cols=75  Identities=16%  Similarity=0.335  Sum_probs=63.2

Q ss_pred             eeccCCCCcchhhHHHHHHHHhhCC-----C---Ccceeeeeeee------ccEEEEEecccccHHHHhccCC-CCCCHH
Q 034245            2 MEIHNTMEEVPSSMIREVSCLMELN-----H---PNIIRLMLVVS------QGLCLFLEYQANDLAYLLKYPK-DSMDGY   66 (100)
Q Consensus         2 ~~~~~~~~~~~~~~~~e~~~l~~l~-----h---~~iv~l~~~~~------~~~~lv~e~~~~~l~~~l~~~~-~~~~~~   66 (100)
                      ||+..+.+...+.++.||.+|+.+.     |   .++|++++.|.      -++++|+|++...|..+|+... .+++..
T Consensus       108 lKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~  187 (590)
T KOG1290|consen  108 LKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLS  187 (590)
T ss_pred             EEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHH
Confidence            5677788888999999999999883     2   27999999998      6789999999988888887643 459999


Q ss_pred             HHHHHHHHhH
Q 034245           67 SIKFSSSDSL   76 (100)
Q Consensus        67 ~~~~~~~~~~   76 (100)
                      .++.+++|++
T Consensus       188 ~VK~I~~qvL  197 (590)
T KOG1290|consen  188 CVKEICRQVL  197 (590)
T ss_pred             HHHHHHHHHH
Confidence            9999999987

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.42  E-value=3.1e-06  Score=51.65  Aligned_cols=77  Identities=9%  Similarity=0.036  Sum_probs=55.3

Q ss_pred             HHHHHHHHhhCCCCcceeeeeeee----------ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------
Q 034245           15 MIREVSCLMELNHPNIIRLMLVVS----------QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus        15 ~~~e~~~l~~l~h~~iv~l~~~~~----------~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------   76 (100)
                      +.+|+..+.++.|+++..+...+.          +..+++|||++ .++.+...     .+......+...+.       
T Consensus        82 ~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~~~~~~i~~~l~~lH~~gi  156 (232)
T PRK10359         82 YENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISEDVKAKIKASIESLHQHGM  156 (232)
T ss_pred             HHHHHHHHHHHHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh-----ccHHHHHHHHHHHHHHHHcCC
Confidence            578999999999999999877754          25899999999 67766632     23322222211111       


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             .|+++..++ ++++|||....
T Consensus       157 ~H~Dikp~Nili~~~g-i~liDfg~~~~  183 (232)
T PRK10359        157 VSGDPHKGNFIVSKNG-LRIIDLSGKRC  183 (232)
T ss_pred             ccCCCChHHEEEeCCC-EEEEECCCccc
Confidence                   899999888 99999997754

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=98.38  E-value=2.1e-06  Score=55.35  Aligned_cols=86  Identities=14%  Similarity=0.159  Sum_probs=65.6

Q ss_pred             chhhHHHHHHHHhhC-CCC-----cceeeeeeee--ccEEEEEecccccHHHHhccCC-CCCCHHHHHHHHHHhH-----
Q 034245           11 VPSSMIREVSCLMEL-NHP-----NIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPK-DSMDGYSIKFSSSDSL-----   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l-~h~-----~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~-----   76 (100)
                      .++..+=|+.+|.++ ++.     -++++.+.|.  +..++++|.++.+++++++... .+++..+++.+..|++     
T Consensus       128 YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~f  207 (415)
T KOG0671|consen  128 YREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAF  207 (415)
T ss_pred             HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHH
Confidence            355666688999888 332     3566666676  9999999999989999998854 4589999999999977     


Q ss_pred             -------------hcccccC--------------------CCeEEEeecCCCC
Q 034245           77 -------------RCCLLSF--------------------GKTVKVADLQALD   96 (100)
Q Consensus        77 -------------~nil~~~--------------------~~~~ki~dfgl~~   96 (100)
                                   +||++.+                    +..++++|||-|.
T Consensus       208 Lh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAt  260 (415)
T KOG0671|consen  208 LHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSAT  260 (415)
T ss_pred             HHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcc
Confidence                         6776632                    2368999999874

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.37  E-value=2.4e-06  Score=50.53  Aligned_cols=81  Identities=7%  Similarity=0.030  Sum_probs=54.9

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ..+.+|+.++..++++++......+.  ...++++|+++ +++.+.+....  .  ..+..+...+.             
T Consensus        42 ~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~~~--~--~~~~~i~~~l~~lH~~gi~H~Dl~  117 (199)
T TIGR03724        42 ERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEEGN--D--ELLREIGRLVGKLHKAGIVHGDLT  117 (199)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCccHHHHHhhcH--H--HHHHHHHHHHHHHHHCCeecCCCC
Confidence            45678999999998876554433333  66789999999 88887765421  1  12222221111             


Q ss_pred             -hcccccCCCeEEEeecCCCCCC
Q 034245           77 -RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 -~nil~~~~~~~ki~dfgl~~~~   98 (100)
                       +|++++ ++.+++.|||++...
T Consensus       118 ~~Nil~~-~~~~~liDfg~a~~~  139 (199)
T TIGR03724       118 TSNIIVR-DDKLYLIDFGLGKYS  139 (199)
T ss_pred             cceEEEE-CCcEEEEECCCCcCC
Confidence             899998 889999999988653

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>smart00090 RIO RIO-like kinase

Probab=98.35  E-value=1.7e-06  Score=52.96  Aligned_cols=83  Identities=13%  Similarity=-0.010  Sum_probs=54.2

Q ss_pred             hHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------------
Q 034245           14 SMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------------   76 (100)
Q Consensus        14 ~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------------   76 (100)
                      .+.+|+..+..+.+. .+.....+. ...++++||++ .++........ ++.......+..|++               
T Consensus        96 ~~~~E~~~L~~L~~~-~i~~p~~~~~~~~~lV~E~~~g~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~  173 (237)
T smart00090       96 WAEKEFRNLQRLYEA-GVPVPKPIAWRRNVLVMEFIGGDGLPAPRLKDV-EPEEEEEFELYDDILEEMRKLYKEGELVHG  173 (237)
T ss_pred             HHHHHHHHHHHHHhc-CCCCCeeeEecCceEEEEEecCCcccccccccC-CcchHHHHHHHHHHHHHHHHHHhcCCEEeC
Confidence            356899999998652 333333333 45689999999 56655432222 244444445555543               


Q ss_pred             ----hcccccCCCeEEEeecCCCCCCC
Q 034245           77 ----RCCLLSFGKTVKVADLQALDWPS   99 (100)
Q Consensus        77 ----~nil~~~~~~~ki~dfgl~~~~~   99 (100)
                          +|+++. ++.++++|||.+...+
T Consensus       174 Dikp~NIli~-~~~i~LiDFg~a~~~~  199 (237)
T smart00090      174 DLSEYNILVH-DGKVVIIDVSQSVELD  199 (237)
T ss_pred             CCChhhEEEE-CCCEEEEEChhhhccC
Confidence                788888 7899999999987654

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.10  E-value=1.6e-05  Score=47.21  Aligned_cols=82  Identities=10%  Similarity=0.061  Sum_probs=51.5

Q ss_pred             hHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH--------------h
Q 034245           14 SMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL--------------R   77 (100)
Q Consensus        14 ~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~--------------~   77 (100)
                      ...+|...+..+.++++ .+..... ...++++||++ +++...... .  ........++.++.              .
T Consensus        79 ~~~~E~~~l~~l~~~~i-~v~~~~~~~~~~lv~e~~~g~~L~~~~~~-~--~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~  154 (198)
T cd05144          79 AAQKEFAALKALYEEGF-PVPKPIDWNRHAVVMEYIDGVELYRVRVL-E--DPEEVLDEILEEIVKAYKHGIIHGDLSEF  154 (198)
T ss_pred             HHHHHHHHHHHHHHcCC-CCCceeecCCceEEEEEeCCcchhhcccc-c--cHHHHHHHHHHHHHHHHHCCCCcCCCCcc
Confidence            36778888888877642 1122222 56689999999 666554321 1  12222222332222              8


Q ss_pred             cccccCCCeEEEeecCCCCCCC
Q 034245           78 CCLLSFGKTVKVADLQALDWPS   99 (100)
Q Consensus        78 nil~~~~~~~ki~dfgl~~~~~   99 (100)
                      |++++.++.++++|||.+...+
T Consensus       155 Nill~~~~~~~liDfg~~~~~~  176 (198)
T cd05144         155 NILVDDDEKIYIIDWPQMVSTD  176 (198)
T ss_pred             cEEEcCCCcEEEEECCccccCC
Confidence            9999999999999999986543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.09  E-value=3.5e-06  Score=60.86  Aligned_cols=58  Identities=17%  Similarity=0.083  Sum_probs=44.6

Q ss_pred             cEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------------hcccccCCCeEEEeecCCCCC
Q 034245           40 GLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        40 ~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      .+|+-||||+ ..+.+.++.....-.......++++++                  .||+++....|||+|||+|.-
T Consensus       670 ~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~  746 (1351)
T KOG1035|consen  670 ILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATD  746 (1351)
T ss_pred             EEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchh
Confidence            4799999999 666777766542113556667777766                  899999999999999999863

>PLN00181 protein SPA1-RELATED; Provisional

Probab=98.07  E-value=3.2e-06  Score=59.46  Aligned_cols=73  Identities=18%  Similarity=0.208  Sum_probs=52.4

Q ss_pred             hhCCC-Ccceeeeeeee---------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH----------------
Q 034245           23 MELNH-PNIIRLMLVVS---------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL----------------   76 (100)
Q Consensus        23 ~~l~h-~~iv~l~~~~~---------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~----------------   76 (100)
                      +.+.| +|+.++.+.|.         ..++.++|+.+++|.+++.....+++...+..+++|++                
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDl  106 (793)
T PLN00181         27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNV  106 (793)
T ss_pred             chhhHHHHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence            44556 57777777662         45677888888999999976544589999999988876                


Q ss_pred             --hcccccCCCeEEEeecCCC
Q 034245           77 --RCCLLSFGKTVKVADLQAL   95 (100)
Q Consensus        77 --~nil~~~~~~~ki~dfgl~   95 (100)
                        +||++...+.+|++|||++
T Consensus       107 KP~NiLl~~~~~~k~~d~~~~  127 (793)
T PLN00181        107 RPSCFVMSSFNHVSFIESASC  127 (793)
T ss_pred             CchhEEEcccCcEEEeecccc
Confidence              8999966555554444443

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.07  E-value=0.00011  Score=45.20  Aligned_cols=86  Identities=29%  Similarity=0.371  Sum_probs=69.1

Q ss_pred             chhhHHHHHHHHhhCCCC-cceeeeeeee--ccEEEEEeccc-ccHHHHhccCCC--CCCHHHHHHHHHHhH--------
Q 034245           11 VPSSMIREVSCLMELNHP-NIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKD--SMDGYSIKFSSSDSL--------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~-~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~--~~~~~~~~~~~~~~~--------   76 (100)
                      ....+.+|+..+..+.|+ +++++.+.+.  ...+++++++. +++...+.....  .++......+..|++        
T Consensus        40 ~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~  119 (384)
T COG0515          40 EVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHS  119 (384)
T ss_pred             HHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            356789999999999888 7999999888  55799999999 888877665531  367777777766654        


Q ss_pred             ----------hcccccCCC-eEEEeecCCCC
Q 034245           77 ----------RCCLLSFGK-TVKVADLQALD   96 (100)
Q Consensus        77 ----------~nil~~~~~-~~ki~dfgl~~   96 (100)
                                +|+++...+ .+++.|||.+.
T Consensus       120 ~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~  150 (384)
T COG0515         120 KGIIHRDIKPENILLDRDGRVVKLIDFGLAK  150 (384)
T ss_pred             CCeeccCCCHHHeeecCCCCeEEEeccCcce
Confidence                      899999887 79999999875

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.06  E-value=3.8e-05  Score=42.73  Aligned_cols=82  Identities=15%  Similarity=0.080  Sum_probs=53.1

Q ss_pred             hhhHHHHHHHHhhCCC--Ccceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHH------HHH-----h
Q 034245           12 PSSMIREVSCLMELNH--PNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFS------SSD-----S   75 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h--~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~------~~~-----~   75 (100)
                      ...+.+|+..+..+++  +++.++.....  +..++++|+++ +.+... ...   ........+      ..+     +
T Consensus        35 ~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~-~~~---~~~~~~~~~~~~l~~lh~~~~~~i  110 (155)
T cd05120          35 GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLDEV-SEE---EKEDIAEQLAELLAKLHQLPLLVL  110 (155)
T ss_pred             hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecccC-CHH---HHHHHHHHHHHHHHHHhCCCceEE
Confidence            4568899999999966  47777776665  67899999998 544332 000   000011111      111     1


Q ss_pred             H------hcccccCCCeEEEeecCCCCC
Q 034245           76 L------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        76 ~------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      +      +|++++..+.+++.|||.+..
T Consensus       111 ~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120         111 CHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             EecCCCcceEEEECCcEEEEEecccccC
Confidence            1      888998889999999998865

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=97.95  E-value=9e-05  Score=48.64  Aligned_cols=83  Identities=17%  Similarity=0.251  Sum_probs=65.9

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee---ccEEEEEeccc-ccHHHHhccC-----C--CCCCHHHHHHHHHHhH-----
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS---QGLCLFLEYQA-NDLAYLLKYP-----K--DSMDGYSIKFSSSDSL-----   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~---~~~~lv~e~~~-~~l~~~l~~~-----~--~~~~~~~~~~~~~~~~-----   76 (100)
                      ..++.|.-++..+.|||+..+.+++.   ..+++.+.+.. |.|..++.-.     .  +..+..++..+..|++     
T Consensus       332 ~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~h  411 (563)
T KOG1024|consen  332 NLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEH  411 (563)
T ss_pred             HHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHH
Confidence            35778888888999999999999887   78899999999 9999998721     1  1245556666666654     


Q ss_pred             -------------hcccccCCCeEEEeecCCC
Q 034245           77 -------------RCCLLSFGKTVKVADLQAL   95 (100)
Q Consensus        77 -------------~nil~~~~~~~ki~dfgl~   95 (100)
                                   +|++++..-.+|++|-.++
T Consensus       412 lh~~~ViHkDiAaRNCvIdd~LqVkltDsaLS  443 (563)
T KOG1024|consen  412 LHNHGVIHKDIAARNCVIDDQLQVKLTDSALS  443 (563)
T ss_pred             HHhcCcccchhhhhcceehhheeEEeccchhc
Confidence                         9999999999999997665

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=97.94  E-value=3.9e-06  Score=57.54  Aligned_cols=80  Identities=24%  Similarity=0.257  Sum_probs=59.9

Q ss_pred             HHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH------------------
Q 034245           17 REVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL------------------   76 (100)
Q Consensus        17 ~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~------------------   76 (100)
                      -|.-+-..+.|+|++.....+.  ...+..||||+.+|+.++..... +....+-.++.|++                  
T Consensus       370 sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~~~~Dlf~~~~~~~~-~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~  448 (601)
T KOG0590|consen  370 SEFCIGSSLSHPNIIETLDIVQEIDGILQSMEYCPYDLFSLVMSNGK-LTPLEADCFFKQLLRGVKYLHSMGLAHRDLKL  448 (601)
T ss_pred             hheeecccccCCchhhhHHHHhhcccchhhhhcccHHHHHHHhcccc-cchhhhhHHHHHHHHHHHHHHhcCceeccCcc
Confidence            3444456678999987766665  44444489999999998877532 66666666666655                  


Q ss_pred             hcccccCCCeEEEeecCCCCC
Q 034245           77 RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ~nil~~~~~~~ki~dfgl~~~   97 (100)
                      +|+++...|.+||+|||.+..
T Consensus       449 enll~~~~g~lki~Dfg~~~v  469 (601)
T KOG0590|consen  449 ENLLVTENGILKIIDFGAASV  469 (601)
T ss_pred             ccEEEecCCceEEeecCccee
Confidence            899999999999999998864

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=97.92  E-value=5.2e-05  Score=49.41  Aligned_cols=81  Identities=20%  Similarity=0.272  Sum_probs=64.5

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      +..+..|+++|..+ .+.|++.+.+.+.  +...+++||.+ .+..++.+.    ++...+..+.+.++           
T Consensus        78 p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~~----l~~~~i~~Yl~~ll~Al~~~h~~GI  153 (418)
T KOG1167|consen   78 PSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEHDRFRDLYRS----LSLAEIRWYLRNLLKALAHLHKNGI  153 (418)
T ss_pred             chHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccCccCHHHHHhc----CCHHHHHHHHHHHHHHhhhhhccCc
Confidence            46688999999988 6899999998887  89999999999 666776654    55666666665544           


Q ss_pred             -------hccccc-CCCeEEEeecCCCC
Q 034245           77 -------RCCLLS-FGKTVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~-~~~~~ki~dfgl~~   96 (100)
                             .|++.+ ..++-.+.|||+|-
T Consensus       154 vHRDiKpsNFL~n~~t~rg~LvDFgLA~  181 (418)
T KOG1167|consen  154 VHRDIKPSNFLYNRRTQRGVLVDFGLAQ  181 (418)
T ss_pred             cccCCCccccccccccCCceEEechhHH
Confidence                   788887 45788899999985

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.84  E-value=8.7e-05  Score=49.31  Aligned_cols=85  Identities=13%  Similarity=0.062  Sum_probs=53.7

Q ss_pred             hHHHHHHHHhhC----CCCcceeeeeeee---ccEEEEEeccc-ccHHHHhccCCCCCCHHH-----HHHHHHHhH----
Q 034245           14 SMIREVSCLMEL----NHPNIIRLMLVVS---QGLCLFLEYQA-NDLAYLLKYPKDSMDGYS-----IKFSSSDSL----   76 (100)
Q Consensus        14 ~~~~e~~~l~~l----~h~~iv~l~~~~~---~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~-----~~~~~~~~~----   76 (100)
                      ++.+|+..+..+    ++.+-+....++.   +..+++|||++ .++.+.......+.....     +..+..|+.    
T Consensus       199 df~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~g~  278 (437)
T TIGR01982       199 DLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLRDGF  278 (437)
T ss_pred             CHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCc
Confidence            466677766554    3444455555554   66789999999 777666543211122222     222333433    


Q ss_pred             -------hcccccCCCeEEEeecCCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                             .|+++..++.+++.|||++...
T Consensus       279 ~H~D~hPgNilv~~~g~i~liDfG~~~~l  307 (437)
T TIGR01982       279 FHADLHPGNIFVLKDGKIIALDFGIVGRL  307 (437)
T ss_pred             eeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence                   8999999999999999998654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=97.78  E-value=9.5e-05  Score=50.95  Aligned_cols=81  Identities=21%  Similarity=0.187  Sum_probs=57.3

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc--ccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA--NDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~--~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      +....+.+-+.-++.++||+|++++..++  +..|+++|-+.  ++..+-+.       ...+...+.|++         
T Consensus        51 ~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~Pl~~~lk~l~-------~~~v~~Gl~qIl~AL~FL~~d  123 (690)
T KOG1243|consen   51 EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVRPLETVLKELG-------KEEVCLGLFQILAALSFLNDD  123 (690)
T ss_pred             hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccccHHHHHHHhH-------HHHHHHHHHHHHHHHHHHhcc
Confidence            33455777888999999999999999998  88999999764  44343332       122222223322         


Q ss_pred             ----------hcccccCCCeEEEeecCCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                +.++++..|.+||++|...+.
T Consensus       124 ~~lvHgNv~~~SVfVn~~GeWkLggle~v~~  154 (690)
T KOG1243|consen  124 CNLVHGNVCKDSVFVNESGEWKLGGLELVSK  154 (690)
T ss_pred             CCeeeccEeeeeEEEcCCCcEEEeeeEEEec
Confidence                      567888999999999987654

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.77  E-value=7.7e-05  Score=50.70  Aligned_cols=84  Identities=10%  Similarity=0.111  Sum_probs=55.2

Q ss_pred             HHHHHHHHhhC----CCCcceeeeeeee---ccEEEEEeccc-ccHHHH--hccCCC---CCCHHHHHHHHHHhH-----
Q 034245           15 MIREVSCLMEL----NHPNIIRLMLVVS---QGLCLFLEYQA-NDLAYL--LKYPKD---SMDGYSIKFSSSDSL-----   76 (100)
Q Consensus        15 ~~~e~~~l~~l----~h~~iv~l~~~~~---~~~~lv~e~~~-~~l~~~--l~~~~~---~~~~~~~~~~~~~~~-----   76 (100)
                      +.+|+..+.++    .+.+.+.+..++.   +..+++|||+. +++.+.  +...+.   .+....+..+..|+.     
T Consensus       203 ~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~~Gff  282 (537)
T PRK04750        203 LMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFRDGFF  282 (537)
T ss_pred             HHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCee
Confidence            55566555444    3445555555554   67789999999 777654  222221   134445566667766     


Q ss_pred             ------hcccccCCC----eEEEeecCCCCCC
Q 034245           77 ------RCCLLSFGK----TVKVADLQALDWP   98 (100)
Q Consensus        77 ------~nil~~~~~----~~ki~dfgl~~~~   98 (100)
                            .|+++..++    .+++.|||+....
T Consensus       283 HaDpHPGNIlv~~~g~~~~~i~llDFGivg~l  314 (537)
T PRK04750        283 HADMHPGNIFVSYDPPENPRYIALDFGIVGSL  314 (537)
T ss_pred             eCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence                  899999887    9999999987643

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=97.75  E-value=0.00012  Score=50.18  Aligned_cols=58  Identities=21%  Similarity=0.226  Sum_probs=42.0

Q ss_pred             ccEEEEEeccc-ccHHHHhccCCCCC-------------------CHHHHHHHHHHhH------------------hccc
Q 034245           39 QGLCLFLEYQA-NDLAYLLKYPKDSM-------------------DGYSIKFSSSDSL------------------RCCL   80 (100)
Q Consensus        39 ~~~~lv~e~~~-~~l~~~l~~~~~~~-------------------~~~~~~~~~~~~~------------------~nil   80 (100)
                      ...++++||++ ++|.+++.....++                   ....+..++.|++                  +||+
T Consensus       208 ~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NIL  287 (566)
T PLN03225        208 DEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNII  287 (566)
T ss_pred             CceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEE
Confidence            67899999999 99998886543211                   1122344555554                  8999


Q ss_pred             ccC-CCeEEEeecCCCC
Q 034245           81 LSF-GKTVKVADLQALD   96 (100)
Q Consensus        81 ~~~-~~~~ki~dfgl~~   96 (100)
                      ++. ++.+||+|||+|.
T Consensus       288 l~~~~~~~KL~DFGlA~  304 (566)
T PLN03225        288 FSEGSGSFKIIDLGAAA  304 (566)
T ss_pred             EeCCCCcEEEEeCCCcc
Confidence            985 6899999999985

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.74  E-value=0.00019  Score=46.23  Aligned_cols=84  Identities=10%  Similarity=0.076  Sum_probs=58.9

Q ss_pred             hhHHHHHHHHhhC-CCCcceee--eeeeeccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           13 SSMIREVSCLMEL-NHPNIIRL--MLVVSQGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l-~h~~iv~l--~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      .+..-|.+..+.+ ..+.|-+.  +|.+-..-.+|+|.+..+|.+++...+..|+...+..++.|++             
T Consensus        68 PQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIY  147 (449)
T KOG1165|consen   68 PQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIY  147 (449)
T ss_pred             chHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceee
Confidence            4466677766666 34455443  3333244458889888777777766666699999988888866             


Q ss_pred             -----hcccccCCC-----eEEEeecCCCC
Q 034245           77 -----RCCLLSFGK-----TVKVADLQALD   96 (100)
Q Consensus        77 -----~nil~~~~~-----~~ki~dfgl~~   96 (100)
                           +|++++..+     .+-+.|||+|.
T Consensus       148 RDIKPdNFLIGrp~~k~~n~IhiiDFGmAK  177 (449)
T KOG1165|consen  148 RDIKPDNFLIGRPGTKDANVIHIIDFGMAK  177 (449)
T ss_pred             cccCccceeecCCCCCCCceEEEEeccchh
Confidence                 899997543     67899999985

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.66  E-value=0.00059  Score=43.51  Aligned_cols=83  Identities=13%  Similarity=0.101  Sum_probs=64.8

Q ss_pred             hHHHHHHHHhhCCC----Ccceeeeeee-e--ccEEEEEecccccHHHHhccCC-CCCCHHHHHHHHHHhH---------
Q 034245           14 SMIREVSCLMELNH----PNIIRLMLVV-S--QGLCLFLEYQANDLAYLLKYPK-DSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        14 ~~~~e~~~l~~l~h----~~iv~l~~~~-~--~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~---------   76 (100)
                      .+..|..++..+..    +++..+.... .  ..-|+||+.+..+|.++.+... ..++...+..+..|.+         
T Consensus        62 ~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~  141 (322)
T KOG1164|consen   62 VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK  141 (322)
T ss_pred             cchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc
Confidence            57788898888862    5777777777 3  6789999999888888765544 4488888888887765         


Q ss_pred             ---------hcccccCC-----CeEEEeecCCCC
Q 034245           77 ---------RCCLLSFG-----KTVKVADLQALD   96 (100)
Q Consensus        77 ---------~nil~~~~-----~~~ki~dfgl~~   96 (100)
                               .|+.++..     ..+.+.|||++.
T Consensus       142 G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar  175 (322)
T KOG1164|consen  142 GFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR  175 (322)
T ss_pred             CcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence                     88888854     468999999997

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=97.47  E-value=0.00075  Score=40.40  Aligned_cols=82  Identities=17%  Similarity=0.182  Sum_probs=48.0

Q ss_pred             hHHHHHHHHhhCCCC--cceeeeeeeeccEEEEEeccc-ccH-HHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           14 SMIREVSCLMELNHP--NIIRLMLVVSQGLCLFLEYQA-NDL-AYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        14 ~~~~e~~~l~~l~h~--~iv~l~~~~~~~~~lv~e~~~-~~l-~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ++.+|...|+++...  ++-.++..  ..-+++|||+. +.+ ...++...  ++......+..+++             
T Consensus        72 wa~kE~r~L~rl~~~Gv~vP~pi~~--~~~~lvME~Ig~~~~~~~~Lkd~~--~~~~~~~~i~~~i~~~l~~l~H~~glV  147 (197)
T cd05146          72 WAEKEMHNLKRMQKAGIPCPEVVVL--KKHVLVMSFIGDDQVPAPKLKDAK--LNDEEMKNAYYQVLSMMKQLYKECNLV  147 (197)
T ss_pred             HHHHHHHHHHHHHHcCCCCCeEEEe--cCCEEEEEEcCCCCccchhhhccc--cCHHHHHHHHHHHHHHHHHHHHhCCee
Confidence            455899999887533  22222221  56788999998 322 22233221  33222222221211             


Q ss_pred             ------hcccccCCCeEEEeecCCCCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDWPSH  100 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~~~~  100 (100)
                            .|+++. ++.+.++|||.+...+|
T Consensus       148 HGDLs~~NIL~~-~~~v~iIDF~qav~~~h  176 (197)
T cd05146         148 HADLSEYNMLWH-DGKVWFIDVSQSVEPTH  176 (197)
T ss_pred             cCCCCHHHEEEE-CCcEEEEECCCceeCCC
Confidence                  899986 57799999999987766

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=97.44  E-value=0.0011  Score=37.92  Aligned_cols=91  Identities=13%  Similarity=0.036  Sum_probs=50.5

Q ss_pred             eeccCCCCcchhhHHHHHHHHhhCCCCcce-eeeeeeeccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHh----
Q 034245            2 MEIHNTMEEVPSSMIREVSCLMELNHPNII-RLMLVVSQGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDS----   75 (100)
Q Consensus         2 ~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv-~l~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~----   75 (100)
                      +|....+........+|+..++.+.+.+++ +++.......++++|+++ .++... ..    ........+...+    
T Consensus        26 lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~~~lv~e~i~G~~l~~~-~~----~~~~~~~~l~~~l~~LH  100 (170)
T cd05151          26 VRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDPETGVLITEFIEGSELLTE-DF----SDPENLEKIAKLLKKLH  100 (170)
T ss_pred             EEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeCCCCeEEEEecCCCccccc-cc----cCHHHHHHHHHHHHHHh
Confidence            344333332234567899999888554443 333322244579999999 554432 00    1111111111111    


Q ss_pred             ---------H------hcccccCCCeEEEeecCCCCCC
Q 034245           76 ---------L------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        76 ---------~------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                               +      .|++++ ++.+++.|||.+...
T Consensus       101 ~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~~  137 (170)
T cd05151         101 SSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGMN  137 (170)
T ss_pred             CCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccCC
Confidence                     1      688888 678999999988653

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=97.42  E-value=6.3e-05  Score=47.34  Aligned_cols=64  Identities=19%  Similarity=0.248  Sum_probs=49.1

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCC-CCHHHHHHHHHHh
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDS-MDGYSIKFSSSDS   75 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~-~~~~~~~~~~~~~   75 (100)
                      ..+|..|...|+.+.||||..+.+.|.  ..+.+++.|++ |+|+..+.....- .+..++..+..++
T Consensus       231 srdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldi  298 (448)
T KOG0195|consen  231 SRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDI  298 (448)
T ss_pred             cchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHH
Confidence            445777888888899999999999999  88899999999 9999999875431 3444444444333

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=97.42  E-value=0.00037  Score=46.07  Aligned_cols=68  Identities=22%  Similarity=0.238  Sum_probs=48.0

Q ss_pred             CCCcceeeeeeee-----------------------------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH
Q 034245           26 NHPNIIRLMLVVS-----------------------------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL   76 (100)
Q Consensus        26 ~h~~iv~l~~~~~-----------------------------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~   76 (100)
                      +|||||++.+.|.                             ..+|++|.-++.+|..++-...  .+......+..|++
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~~--~s~r~~~~~laQlL  351 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWTRH--RSYRTGRVILAQLL  351 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhcCC--CchHHHHHHHHHHH
Confidence            6999999887763                             3468888888888888876544  34444444555544


Q ss_pred             ------------------hcccccC--CC--eEEEeecCCC
Q 034245           77 ------------------RCCLLSF--GK--TVKVADLQAL   95 (100)
Q Consensus        77 ------------------~nil~~~--~~--~~ki~dfgl~   95 (100)
                                        +||++..  ++  ...++|||.+
T Consensus       352 Eav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCc  392 (598)
T KOG4158|consen  352 EAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCC  392 (598)
T ss_pred             HHHHHHHHccchhhcccccceEEEecCCCCcEEEEccccee
Confidence                              8999863  32  6789999965

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=97.34  E-value=0.00022  Score=48.69  Aligned_cols=82  Identities=20%  Similarity=0.242  Sum_probs=63.4

Q ss_pred             hHHHHHHHHhhCC-CCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           14 SMIREVSCLMELN-HPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        14 ~~~~e~~~l~~l~-h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ....|-.++..++ ||.+++++-.+.  +..+++.++.- ++++..+..... +.......+....+             
T Consensus        42 ~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~~~-f~~~~~~~~~aelaLald~lh~l~iiy  120 (612)
T KOG0603|consen   42 HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKEVM-FDELDVAFYLAELALALDHLHKLGIAY  120 (612)
T ss_pred             ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcccchhhhccccCCc-hHHHHHHHHHHHHHHHHhhcchhHHHH
Confidence            4555777788886 999999988888  88999999998 899988877653 44444443332221             


Q ss_pred             -----hcccccCCCeEEEeecCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~   96 (100)
                           +|+++..+|.+++.|||+..
T Consensus       121 rd~k~enilld~~Ghi~~tdfglsk  145 (612)
T KOG0603|consen  121 RDYKLENVLLLLEGHIKLTDFGLSK  145 (612)
T ss_pred             hcccccceeecccCccccCCchhhh
Confidence                 89999999999999999864

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=97.30  E-value=0.0023  Score=43.69  Aligned_cols=81  Identities=16%  Similarity=0.094  Sum_probs=58.7

Q ss_pred             HHHHHHHhhCCCCcceeeeeeee------ccEEEEEeccc--ccHHHHhccCC--------------CCCCHHHHHHHHH
Q 034245           16 IREVSCLMELNHPNIIRLMLVVS------QGLCLFLEYQA--NDLAYLLKYPK--------------DSMDGYSIKFSSS   73 (100)
Q Consensus        16 ~~e~~~l~~l~h~~iv~l~~~~~------~~~~lv~e~~~--~~l~~~l~~~~--------------~~~~~~~~~~~~~   73 (100)
                      ..-.+..+++.|+|+|.+.+++.      ..+.++++|.|  ++|.+.-....              .+.++..+..++.
T Consensus       321 t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~  400 (655)
T KOG3741|consen  321 TSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYIS  400 (655)
T ss_pred             hHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHH
Confidence            34456679999999999999887      67899999998  77877643211              1245677777777


Q ss_pred             HhH------------------hcccccCCCeEEEeecCCCC
Q 034245           74 DSL------------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        74 ~~~------------------~nil~~~~~~~ki~dfgl~~   96 (100)
                      |+.                  ++|++..+-+++|+.-|+..
T Consensus       401 QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~D  441 (655)
T KOG3741|consen  401 QLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMD  441 (655)
T ss_pred             HHHHHHHHHHhcCceeecccHhHeEeeCcceEEEeccccee
Confidence            755                  77788777788887666544

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.25  E-value=0.0019  Score=40.22  Aligned_cols=94  Identities=11%  Similarity=0.137  Sum_probs=59.3

Q ss_pred             eccCCCCcchhhHHHHHHHHhhCCCC-cceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH---
Q 034245            3 EIHNTMEEVPSSMIREVSCLMELNHP-NIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL---   76 (100)
Q Consensus         3 ~~~~~~~~~~~~~~~e~~~l~~l~h~-~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~---   76 (100)
                      |++..... -.....|..+.+.+++. .+-++.....  ..-.+||+.+..+|.+.+.-....++-..+..++-|++   
T Consensus        46 K~Es~~a~-hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~Ri  124 (341)
T KOG1163|consen   46 KLESSKAK-HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRI  124 (341)
T ss_pred             EeecccCC-CcchhHHHHHHHHhccCCCCchhhhhccccccceeeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHH
Confidence            34333333 23477888888888643 3333333333  66679999987555555443333377777777777755   


Q ss_pred             ---------------hcccccCC---CeEEEeecCCCCC
Q 034245           77 ---------------RCCLLSFG---KTVKVADLQALDW   97 (100)
Q Consensus        77 ---------------~nil~~~~---~~~ki~dfgl~~~   97 (100)
                                     +|++..-+   ..+-++|||+|..
T Consensus       125 EyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKk  163 (341)
T KOG1163|consen  125 EYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKK  163 (341)
T ss_pred             HHHHhhccccccCCccceeeccccccceEEEEeccchhh
Confidence                           78887643   3677999999853

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.18  E-value=0.0039  Score=37.22  Aligned_cols=80  Identities=15%  Similarity=0.082  Sum_probs=49.2

Q ss_pred             hhHHHHHHHHhhCCCCcceee--eeeeeccEEEEEeccccc-HHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           13 SSMIREVSCLMELNHPNIIRL--MLVVSQGLCLFLEYQAND-LAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l--~~~~~~~~~lv~e~~~~~-l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ....+|+.++.+++--.+...  +.+-.+...++|||.+|. +.+.+...    .......+..++.             
T Consensus        44 ~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~----~~~~~r~vG~~vg~lH~~givHGDLT  119 (204)
T COG3642          44 ERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA----RPDLLREVGRLVGKLHKAGIVHGDLT  119 (204)
T ss_pred             HHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc----chHHHHHHHHHHHHHHhcCeecCCCc
Confidence            457789999988754333222  221116667999999954 55566554    2233333333333             


Q ss_pred             -hcccccCCCeEEEeecCCCCC
Q 034245           77 -RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -~nil~~~~~~~ki~dfgl~~~   97 (100)
                       .|+++.... +-++|||++..
T Consensus       120 tsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642         120 TSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             cceEEEeCCc-EEEEECCcccc
Confidence             788876655 88999999864

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=97.12  E-value=0.0027  Score=38.08  Aligned_cols=85  Identities=13%  Similarity=0.025  Sum_probs=51.2

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccc--cHHHHhccCCCC--CCH---HHHHHHHHHhH-------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQAN--DLAYLLKYPKDS--MDG---YSIKFSSSDSL-------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~--~l~~~l~~~~~~--~~~---~~~~~~~~~~~-------   76 (100)
                      .+..+|++.|.++.--.|.-..-++.  ..-.+.|||.+|  ++.+++......  .+.   .....+..++.       
T Consensus        55 ~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndi  134 (229)
T KOG3087|consen   55 KRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDI  134 (229)
T ss_pred             HHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCe
Confidence            45677999888875443333222233  556788999985  788887654322  111   22223333332       


Q ss_pred             -------hcccccCCC---eEEEeecCCCCC
Q 034245           77 -------RCCLLSFGK---TVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~---~~ki~dfgl~~~   97 (100)
                             .|+++.+++   .+-++|||++.+
T Consensus       135 iHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen  135 IHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             ecccccccceEEecCCCcCceEEEeecchhc
Confidence                   899987654   447999999865

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.03  E-value=0.0021  Score=38.21  Aligned_cols=85  Identities=14%  Similarity=0.010  Sum_probs=46.2

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc--ccHHHHhccCC--CCCCHHHHHHHHHHhH-----------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA--NDLAYLLKYPK--DSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~--~~l~~~l~~~~--~~~~~~~~~~~~~~~~-----------   76 (100)
                      .+..+|.+.|..+..-.+. ....+. ..-.++|||++  |.....+....  ..-.......+..++.           
T Consensus        53 ~~~~~E~~~L~~l~~~Gv~-vP~p~~~~~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~givHG  131 (188)
T PF01163_consen   53 EWAKKEFRNLKRLYEAGVP-VPKPYDYNRNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKAGIVHG  131 (188)
T ss_dssp             HHHHHHHHHHHHCCCTT-S-S--EEEEETTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCTTEEES
T ss_pred             HHHHHHHHHHHHHHHCCcc-CCcEEEEeCCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhcCceec
Confidence            4678899999998755321 122223 56679999998  65555554432  1011112222222111           


Q ss_pred             ----hcccccCCCeEEEeecCCCCCCC
Q 034245           77 ----RCCLLSFGKTVKVADLQALDWPS   99 (100)
Q Consensus        77 ----~nil~~~~~~~ki~dfgl~~~~~   99 (100)
                          .||++..+ .+.++|||.+...+
T Consensus       132 DLs~~NIlv~~~-~~~iIDf~qav~~~  157 (188)
T PF01163_consen  132 DLSEYNILVDDG-KVYIIDFGQAVDSS  157 (188)
T ss_dssp             S-STTSEEEETT-CEEE--GTTEEETT
T ss_pred             CCChhhEEeecc-eEEEEecCcceecC
Confidence                78888776 89999999876544

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=97.02  E-value=0.0013  Score=37.89  Aligned_cols=46  Identities=17%  Similarity=0.174  Sum_probs=38.5

Q ss_pred             ccHHHHhccCCCCCCHHHHHHHHHHhH------------hcccccCCCeEEEeecCCCCC
Q 034245           50 NDLAYLLKYPKDSMDGYSIKFSSSDSL------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        50 ~~l~~~l~~~~~~~~~~~~~~~~~~~~------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      |+|.+.+.....++++..+..++.|++            +|++++.++.+|+  ||++..
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~kp~Nil~~~~~~~~~--fG~~~~   58 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQAKSGNILLTWDGLLKL--DGSVAF   58 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccEeEcCccceee--ccceEe
Confidence            678888876555699999999998876            7999999999998  998754

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=96.57  E-value=0.014  Score=34.68  Aligned_cols=77  Identities=16%  Similarity=0.008  Sum_probs=54.6

Q ss_pred             HHHHHHhhCCC-CcceeeeeeeeccEEEEEeccc-ccHHHH---hccCCCCCCHHHHHHHHHHhH---------------
Q 034245           17 REVSCLMELNH-PNIIRLMLVVSQGLCLFLEYQA-NDLAYL---LKYPKDSMDGYSIKFSSSDSL---------------   76 (100)
Q Consensus        17 ~e~~~l~~l~h-~~iv~l~~~~~~~~~lv~e~~~-~~l~~~---l~~~~~~~~~~~~~~~~~~~~---------------   76 (100)
                      .|.-++..+++ +++.+++|.| +.. .++|+.+ +++...   +.... ..++.....++.+++               
T Consensus         8 ~E~lll~~l~~~~~~pk~lG~C-G~~-~v~E~~~~~~~~~~~~~l~~~~-~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~   84 (188)
T PF12260_consen    8 NEPLLLQLLQGSEPFPKLLGSC-GRF-YVVEYVGAGSLYGIYRPLSQFL-QSPWEQRAKIALQLLELLEELDHGPLGFFY   84 (188)
T ss_pred             cHHHHHHHcCCCCCCCCeeeEC-CCE-EEEEeecCcccccccccccccc-ccCHHHHHHHHHHHHHHHHHHhcCCCCcEE
Confidence            47777888865 5899999999 554 5788887 655421   11111 257778777877765               


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +|+.+..++.+|+.|..-+.
T Consensus        85 lcDv~~~nfgv~~~~~lk~iDld~v~  110 (188)
T PF12260_consen   85 LCDVSPDNFGVNDDGRLKLIDLDDVF  110 (188)
T ss_pred             EeecchHHeEEeCCCcEEEEechhcc
Confidence                  88888988999999987543

Proteins in this uncharacterised family are described as transmembrane proteins.

>cd05119 RIO RIO kinase family, catalytic domain

Probab=96.57  E-value=0.011  Score=34.39  Aligned_cols=21  Identities=14%  Similarity=-0.007  Sum_probs=18.3

Q ss_pred             hcccccCCCeEEEeecCCCCCC
Q 034245           77 RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 ~nil~~~~~~~ki~dfgl~~~~   98 (100)
                      +|++++ ++.++++|||.+...
T Consensus       144 ~Nili~-~~~~~liDfg~a~~~  164 (187)
T cd05119         144 YNILVD-DGKVYIIDVPQAVEI  164 (187)
T ss_pred             hhEEEE-CCcEEEEECcccccc
Confidence            889998 899999999998644

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=96.31  E-value=0.054  Score=32.16  Aligned_cols=43  Identities=14%  Similarity=0.130  Sum_probs=28.5

Q ss_pred             hhhHHHHHHHHhhCCCC--cceeeeeeee-----ccEEEEEeccc-ccHHH
Q 034245           12 PSSMIREVSCLMELNHP--NIIRLMLVVS-----QGLCLFLEYQA-NDLAY   54 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~--~iv~l~~~~~-----~~~~lv~e~~~-~~l~~   54 (100)
                      ...+.+|...++.+.+.  ++.+++....     +..++++|+++ .++..
T Consensus        39 ~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~   89 (223)
T cd05154          39 AHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRD   89 (223)
T ss_pred             cccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeCCEecCC
Confidence            45688999999998653  3444444443     15689999987 54433

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=96.13  E-value=0.0076  Score=43.87  Aligned_cols=56  Identities=29%  Similarity=0.311  Sum_probs=44.7

Q ss_pred             ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------------hcccccC-------CCeEEEeec
Q 034245           39 QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------------RCCLLSF-------GKTVKVADL   92 (100)
Q Consensus        39 ~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------------~nil~~~-------~~~~ki~df   92 (100)
                      +...++++|.+ |+|.+.+..... +++..+..+..|++                  +|+++..       ...++|+||
T Consensus       767 ~~S~lv~ey~~~Gtlld~~N~~~~-m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDf  845 (974)
T KOG1166|consen  767 NASVLVSEYSPYGTLLDLINTNKV-MDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDF  845 (974)
T ss_pred             CcceeeeeccccccHHHhhccCCC-CCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEec
Confidence            77789999999 999999985544 88888888877766                  7887742       347899999


Q ss_pred             CCC
Q 034245           93 QAL   95 (100)
Q Consensus        93 gl~   95 (100)
                      |-+
T Consensus       846 G~s  848 (974)
T KOG1166|consen  846 GRS  848 (974)
T ss_pred             ccc
Confidence            976

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=95.79  E-value=0.087  Score=31.62  Aligned_cols=83  Identities=19%  Similarity=0.081  Sum_probs=51.5

Q ss_pred             hhHHHHHHHHhhCCCCcc--eeeeeeee------ccEEEEEeccc--ccHHHHhccCCCCCCHHHHHHHHHHhH------
Q 034245           13 SSMIREVSCLMELNHPNI--IRLMLVVS------QGLCLFLEYQA--NDLAYLLKYPKDSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~i--v~l~~~~~------~~~~lv~e~~~--~~l~~~l~~~~~~~~~~~~~~~~~~~~------   76 (100)
                      ..+.+|...+..+....|  .......+      ...++++|+++  .+|.+++..... .+......+..+++      
T Consensus        56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~-~~~~~~~~ll~~l~~~i~~l  134 (206)
T PF06293_consen   56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ-LDPSQRRELLRALARLIAKL  134 (206)
T ss_pred             hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc-cchhhHHHHHHHHHHHHHHH
Confidence            457788887776643333  23333333      34589999988  468888876322 33333333333332      


Q ss_pred             ------------hcccccCCC---eEEEeecCCCC
Q 034245           77 ------------RCCLLSFGK---TVKVADLQALD   96 (100)
Q Consensus        77 ------------~nil~~~~~---~~ki~dfgl~~   96 (100)
                                  .||++..+.   .+-++||+-+.
T Consensus       135 H~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~  169 (206)
T PF06293_consen  135 HDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMR  169 (206)
T ss_pred             HHCcCCCCCCCcccEEEeCCCCceeEEEEcchhce
Confidence                        899998776   88899998654

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=95.44  E-value=0.013  Score=38.21  Aligned_cols=69  Identities=19%  Similarity=0.291  Sum_probs=51.5

Q ss_pred             HhhCCCCcceeeeeeee-------ccEEEEEeccc-ccHHHHhccCC---CCCCHHHHHHHHHHhH--------------
Q 034245           22 LMELNHPNIIRLMLVVS-------QGLCLFLEYQA-NDLAYLLKYPK---DSMDGYSIKFSSSDSL--------------   76 (100)
Q Consensus        22 l~~l~h~~iv~l~~~~~-------~~~~lv~e~~~-~~l~~~l~~~~---~~~~~~~~~~~~~~~~--------------   76 (100)
                      +-.+.|.|+++++.++-       ....+.+||+. |.+.+++++-.   ..+.......|+-|++              
T Consensus       121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppii  200 (458)
T KOG1266|consen  121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPII  200 (458)
T ss_pred             HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccc
Confidence            34456899999988876       66789999999 99999997532   2256666777887766              


Q ss_pred             ------hcccccCCCeEEEe
Q 034245           77 ------RCCLLSFGKTVKVA   90 (100)
Q Consensus        77 ------~nil~~~~~~~ki~   90 (100)
                            +.+++..+|.+|+.
T Consensus       201 hgnlTc~tifiq~ngLIkig  220 (458)
T KOG1266|consen  201 HGNLTCDTIFIQHNGLIKIG  220 (458)
T ss_pred             cCCcchhheeecCCceEEec
Confidence                  56666777877765

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=95.43  E-value=0.0054  Score=41.47  Aligned_cols=60  Identities=10%  Similarity=0.018  Sum_probs=45.2

Q ss_pred             cEEEEEeccc-ccHHHHhccCC--CCCCHHHHHHHHHHhH---------------hcccccCCCeEEEeecCCCCCCC
Q 034245           40 GLCLFLEYQA-NDLAYLLKYPK--DSMDGYSIKFSSSDSL---------------RCCLLSFGKTVKVADLQALDWPS   99 (100)
Q Consensus        40 ~~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~~~~~---------------~nil~~~~~~~ki~dfgl~~~~~   99 (100)
                      .+|+.|++|. .+|.+++...+  ...+......+..|+.               -||....+..+||.|||+.....
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~yk~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~  407 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEYKGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQD  407 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhhccchhhhccccccccccchhhhhhhhhheeecc
Confidence            5889999999 99999996443  2245555555555544               48898889999999999986554

>PRK09902 hypothetical protein; Provisional

Probab=95.38  E-value=0.19  Score=30.75  Aligned_cols=85  Identities=15%  Similarity=0.110  Sum_probs=51.6

Q ss_pred             hhhHHHHHHHHhhCCCCcc--eeee--eeee----ccEEEEEeccc--ccHHHHhccCC-CCCCHHHHHHHHHHhH----
Q 034245           12 PSSMIREVSCLMELNHPNI--IRLM--LVVS----QGLCLFLEYQA--NDLAYLLKYPK-DSMDGYSIKFSSSDSL----   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~i--v~l~--~~~~----~~~~lv~e~~~--~~l~~~l~~~~-~~~~~~~~~~~~~~~~----   76 (100)
                      ...+.+|...+..+..-++  .+..  +.-.    ...++++|-++  .+|.+++.... .+.+......+..+++    
T Consensus        63 ~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia  142 (216)
T PRK09902         63 RPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFK  142 (216)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHH
Confidence            4679999999988743322  2222  1111    45789999777  88988875532 1233333223322222    


Q ss_pred             --------------hcccccCCCe--EEEeecCCCC
Q 034245           77 --------------RCCLLSFGKT--VKVADLQALD   96 (100)
Q Consensus        77 --------------~nil~~~~~~--~ki~dfgl~~   96 (100)
                                    +||++..++.  ++++||.-+.
T Consensus       143 ~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r  178 (216)
T PRK09902        143 KMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR  178 (216)
T ss_pred             HHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence                          8999975565  9999987543

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=95.35  E-value=0.11  Score=35.71  Aligned_cols=84  Identities=13%  Similarity=0.087  Sum_probs=56.0

Q ss_pred             hHHHHHHHHhhC----CCCcceeeeeeee---ccEEEEEeccc-ccHHHH--hccCCCCCCHHH-----HHHHHHHhH--
Q 034245           14 SMIREVSCLMEL----NHPNIIRLMLVVS---QGLCLFLEYQA-NDLAYL--LKYPKDSMDGYS-----IKFSSSDSL--   76 (100)
Q Consensus        14 ~~~~e~~~l~~l----~h~~iv~l~~~~~---~~~~lv~e~~~-~~l~~~--l~~~~~~~~~~~-----~~~~~~~~~--   76 (100)
                      ++.+|+..+.++    +...-+++..++-   +.-.++|||++ -.+.+.  ++..  +.+...     +..+..|+.  
T Consensus       207 Dy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~--g~d~k~ia~~~~~~f~~q~~~d  284 (517)
T COG0661         207 DYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSA--GIDRKELAELLVRAFLRQLLRD  284 (517)
T ss_pred             CHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhc--CCCHHHHHHHHHHHHHHHHHhc
Confidence            466777766554    4555566666654   77889999998 455555  3332  244333     344455555  


Q ss_pred             ---------hcccccCCCeEEEeecCCCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDWPS   99 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~~~   99 (100)
                               -|+++..+|.+...|||+.+..+
T Consensus       285 gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~  316 (517)
T COG0661         285 GFFHADPHPGNILVRSDGRIVLLDFGIVGRLD  316 (517)
T ss_pred             CccccCCCccceEEecCCcEEEEcCcceecCC
Confidence                     79999999999999999876543

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=95.23  E-value=0.23  Score=31.30  Aligned_cols=82  Identities=16%  Similarity=0.009  Sum_probs=49.6

Q ss_pred             hHHHHHHHHhhCC-----CCcceeeeeeee----ccEEEEEecccc--cHHHHhccC-CCCCCHHHHHHHHHHhH-----
Q 034245           14 SMIREVSCLMELN-----HPNIIRLMLVVS----QGLCLFLEYQAN--DLAYLLKYP-KDSMDGYSIKFSSSDSL-----   76 (100)
Q Consensus        14 ~~~~e~~~l~~l~-----h~~iv~l~~~~~----~~~~lv~e~~~~--~l~~~l~~~-~~~~~~~~~~~~~~~~~-----   76 (100)
                      .+.+|...+..+.     -|..+-+...-.    ...++++|++++  ++.+++... ..+.+......+..+++     
T Consensus        74 ~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~  153 (268)
T PRK15123         74 GADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRD  153 (268)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHH
Confidence            3778888887763     233333321111    347899999983  688877532 12233344334444433     


Q ss_pred             -------------hcccccC-------CCeEEEeecCCC
Q 034245           77 -------------RCCLLSF-------GKTVKVADLQAL   95 (100)
Q Consensus        77 -------------~nil~~~-------~~~~ki~dfgl~   95 (100)
                                   .||++..       ++.+.++||+.+
T Consensus       154 LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~  192 (268)
T PRK15123        154 MHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRA  192 (268)
T ss_pred             HHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcc
Confidence                         8999974       468899999976

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=94.68  E-value=0.074  Score=36.52  Aligned_cols=89  Identities=16%  Similarity=0.069  Sum_probs=63.1

Q ss_pred             CcchhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245            9 EEVPSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      +....+-.+|....+++ .|++.++.+..+.  +..++-+|++..++...+......++...+.....+..         
T Consensus       158 p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~  237 (524)
T KOG0601|consen  158 PLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSH  237 (524)
T ss_pred             ccccccccchhhcccccCccccccccCcccccCCcceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccc
Confidence            34445567788888888 4999999888888  88899999998888777765443355444444433321         


Q ss_pred             -------------hcccccCC-CeEEEeecCCCCC
Q 034245           77 -------------RCCLLSFG-KTVKVADLQALDW   97 (100)
Q Consensus        77 -------------~nil~~~~-~~~ki~dfgl~~~   97 (100)
                                   +|++...+ ...+++|||+...
T Consensus       238 ~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~  272 (524)
T KOG0601|consen  238 LHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSK  272 (524)
T ss_pred             cCCCcccccccchhheecccccceeecCCcceeEE
Confidence                         78888877 7888999987643

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=94.31  E-value=0.012  Score=40.89  Aligned_cols=86  Identities=17%  Similarity=0.121  Sum_probs=61.3

Q ss_pred             hhHHHHHHHHhhCC-CCcceeeeeeee--ccEEEEEeccc-ccHHHHh-ccCCCCCCHHHHHHHHHHhH-----------
Q 034245           13 SSMIREVSCLMELN-HPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLL-KYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~-h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l-~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ..+..|...-+.+. |+|++++.+...  ...++.+++.. ++++..+ ....-..+......+..|+.           
T Consensus        65 ~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~  144 (601)
T KOG0590|consen   65 EHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG  144 (601)
T ss_pred             hhcCccccccccccccccccccCCccCCCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccc
Confidence            34555777666665 999999999888  77888999977 8888877 33321244444444554433           


Q ss_pred             --------hcccccCCC-eEEEeecCCCCCC
Q 034245           77 --------RCCLLSFGK-TVKVADLQALDWP   98 (100)
Q Consensus        77 --------~nil~~~~~-~~ki~dfgl~~~~   98 (100)
                              +|.+++..+ ..|++|||+|..-
T Consensus       145 ~~h~~ikP~n~~l~~s~~~l~~~df~~At~~  175 (601)
T KOG0590|consen  145 VTHRDIKPSNSLLDESGSALKIADFGLATAY  175 (601)
T ss_pred             cccCCCCCccchhccCCCcccCCCchhhccc
Confidence                    677888777 9999999998753

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=94.30  E-value=0.026  Score=42.09  Aligned_cols=28  Identities=39%  Similarity=0.603  Sum_probs=24.7

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS   38 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~   38 (100)
                      ....+.||+.+|.+++|||+|+++..|.
T Consensus       520 ~~skI~rEVk~LArLnHpNVVRYysAWV  547 (1351)
T KOG1035|consen  520 LYSKILREVKLLARLNHPNVVRYYSAWV  547 (1351)
T ss_pred             HHHHHHHHHHHHhhcCCcceeeeehhhh
Confidence            3456889999999999999999998886

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=93.43  E-value=0.51  Score=30.19  Aligned_cols=86  Identities=15%  Similarity=0.084  Sum_probs=51.6

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHh---H-----------h
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDS---L-----------R   77 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~---~-----------~   77 (100)
                      ..+.||...|..+.. .-+.+...+- +...++||+..|.....++.... -+..-...+...+   .           =
T Consensus       154 l~A~rEf~~L~~L~~-~G~~VP~P~~~nRHaVvMe~ieG~eL~~~r~~~e-n~~~il~~il~~~~~~~~~GiVHGDlSef  231 (304)
T COG0478         154 LAAEREFEALQRLYP-EGVKVPKPIAWNRHAVVMEYIEGVELYRLRLDVE-NPDEILDKILEEVRKAYRRGIVHGDLSEF  231 (304)
T ss_pred             HHHHHHHHHHHHhhh-cCCCCCCccccccceeeeehcccceeecccCccc-CHHHHHHHHHHHHHHHHHcCccccCCchh
Confidence            457788888887753 2233344444 78889999999543333331111 1111111111111   1           6


Q ss_pred             cccccCCCeEEEeecCCCCCCCC
Q 034245           78 CCLLSFGKTVKVADLQALDWPSH  100 (100)
Q Consensus        78 nil~~~~~~~ki~dfgl~~~~~~  100 (100)
                      ||+++.+|.+.++||--+...+|
T Consensus       232 NIlV~~dg~~~vIDwPQ~v~~~h  254 (304)
T COG0478         232 NILVTEDGDIVVIDWPQAVPISH  254 (304)
T ss_pred             eEEEecCCCEEEEeCcccccCCC
Confidence            99999999999999987776665

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=93.37  E-value=0.0095  Score=44.09  Aligned_cols=78  Identities=15%  Similarity=0.172  Sum_probs=58.5

Q ss_pred             HHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-----------------
Q 034245           16 IREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-----------------   76 (100)
Q Consensus        16 ~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------------   76 (100)
                      ++|++ ..-.++||.+.+.-.-.  .-.|++-+|...+|++++.-++. +.....+.++.|++                 
T Consensus        70 L~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRqyvkhnLyDRlSTRPF-L~~iEKkWiaFQLL~al~qcH~~gVcHGDIK  147 (1431)
T KOG1240|consen   70 LEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQYVKHNLYDRLSTRPF-LVLIEKKWIAFQLLKALSQCHKLGVCHGDIK  147 (1431)
T ss_pred             HHHHH-HHhhcCCcccchHHHHHhhHHHHHHHHHHhhhhhhhhccchH-HHHHHHHHHHHHHHHHHHHHHHcCccccccc
Confidence            33444 44558999998766544  55677778888999999987764 66666677777765                 


Q ss_pred             -hcccccCCCeEEEeecCCC
Q 034245           77 -RCCLLSFGKTVKVADLQAL   95 (100)
Q Consensus        77 -~nil~~~~~~~ki~dfgl~   95 (100)
                       +||++.+-..+-++||.-.
T Consensus       148 sENILiTSWNW~~LtDFAsF  167 (1431)
T KOG1240|consen  148 SENILITSWNWLYLTDFASF  167 (1431)
T ss_pred             cceEEEeeechhhhhccccc
Confidence             8999998888889998755

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=92.75  E-value=0.41  Score=33.21  Aligned_cols=85  Identities=12%  Similarity=0.037  Sum_probs=50.7

Q ss_pred             hHHHHHHHHhh----CCCCc---ceeeeeeee---ccEEEEEeccc-ccHH--HHhccCCCCCCHHHHHHH-----HHHh
Q 034245           14 SMIREVSCLME----LNHPN---IIRLMLVVS---QGLCLFLEYQA-NDLA--YLLKYPKDSMDGYSIKFS-----SSDS   75 (100)
Q Consensus        14 ~~~~e~~~l~~----l~h~~---iv~l~~~~~---~~~~lv~e~~~-~~l~--~~l~~~~~~~~~~~~~~~-----~~~~   75 (100)
                      +|.+|++...+    ++|-+   -|....++.   ..-.++|||++ ..+.  +.+++.+  .+...+...     ..|+
T Consensus       240 DF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~g--i~~~~i~~~l~~~~~~qI  317 (538)
T KOG1235|consen  240 DFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRG--ISPHDILNKLVEAYLEQI  317 (538)
T ss_pred             chHHHHHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHcC--CCHHHHHHHHHHHHHHHH
Confidence            35556554433    34545   334555554   67789999998 4343  3344443  444444333     3334


Q ss_pred             H-----------hcccccC----CCeEEEeecCCCCCCCC
Q 034245           76 L-----------RCCLLSF----GKTVKVADLQALDWPSH  100 (100)
Q Consensus        76 ~-----------~nil~~~----~~~~ki~dfgl~~~~~~  100 (100)
                      .           -|+++.+    ++.+.+-|||+....+|
T Consensus       318 f~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  318 FKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH  357 (538)
T ss_pred             HhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence            3           7899883    56899999999876654

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=92.01  E-value=0.77  Score=28.98  Aligned_cols=83  Identities=14%  Similarity=0.039  Sum_probs=46.8

Q ss_pred             hHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc--ccHHHHhccCCCCCCHHHHHHHHHHhH--------------
Q 034245           14 SMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA--NDLAYLLKYPKDSMDGYSIKFSSSDSL--------------   76 (100)
Q Consensus        14 ~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~--~~l~~~l~~~~~~~~~~~~~~~~~~~~--------------   76 (100)
                      +..+|..-|+.+.... |+...... ..-.++|||++  +.-...++.-+  +..........++.              
T Consensus       114 W~~kEf~NL~R~~eAG-VrvP~Pi~~~~nVLvMEfIg~~g~pAP~LkDv~--~e~~e~~~~~~~~v~~~~~l~~~a~LVH  190 (268)
T COG1718         114 WARKEFRNLKRAYEAG-VRVPEPIAFRNNVLVMEFIGDDGLPAPRLKDVP--LELEEAEGLYEDVVEYMRRLYKEAGLVH  190 (268)
T ss_pred             HHHHHHHHHHHHHHcC-CCCCCceeecCCeEEEEeccCCCCCCCCcccCC--cCchhHHHHHHHHHHHHHHHHHhcCccc
Confidence            4556777666653332 33322222 45578999988  44444454433  22212222211111              


Q ss_pred             -----hcccccCCCeEEEeecCCCCCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALDWPSH  100 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~~~~~  100 (100)
                           =|+++. ++.+-++|+|-|...+|
T Consensus       191 gDLSEyNiL~~-~~~p~iID~~QaV~~~h  218 (268)
T COG1718         191 GDLSEYNILVH-DGEPYIIDVSQAVTIDH  218 (268)
T ss_pred             ccchhhheEEE-CCeEEEEECccccccCC
Confidence                 488887 88999999999887765

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=81.77  E-value=9.4  Score=23.26  Aligned_cols=38  Identities=16%  Similarity=0.008  Sum_probs=24.9

Q ss_pred             hhHHHHHHHHhhCC-CCcceeeeeeee--ccEEEEEecccc
Q 034245           13 SSMIREVSCLMELN-HPNIIRLMLVVS--QGLCLFLEYQAN   50 (100)
Q Consensus        13 ~~~~~e~~~l~~l~-h~~iv~l~~~~~--~~~~lv~e~~~~   50 (100)
                      ....+|+..++.+. +..+-+++....  +..++++|+++|
T Consensus        36 ~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G   76 (244)
T cd05150          36 YELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPG   76 (244)
T ss_pred             cchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCC
Confidence            45778999988874 323334444443  457899999873

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=80.64  E-value=0.98  Score=31.31  Aligned_cols=80  Identities=16%  Similarity=0.019  Sum_probs=51.7

Q ss_pred             HHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------------
Q 034245           16 IREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------------   76 (100)
Q Consensus        16 ~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------------   76 (100)
                      ++|+.+...+ .|.+.+++...|.  ...|+..|||. ++......-. .-+..........|++               
T Consensus       313 l~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~-~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d  391 (524)
T KOG0601|consen  313 LGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTS-QMLDEDPRLRLTAQILTALNVIHSKLFVHLD  391 (524)
T ss_pred             hhhhhHhhHhhcccccCCCCCCccccccccCchhhhcCcchhhhhHHH-HhcCcchhhhhHHHHHhccccccchhhhccc
Confidence            4566666665 5888888888877  77889999997 6655544211 1133444444444433               


Q ss_pred             ---hcccccCC-CeEEEeecCCCC
Q 034245           77 ---RCCLLSFG-KTVKVADLQALD   96 (100)
Q Consensus        77 ---~nil~~~~-~~~ki~dfgl~~   96 (100)
                         .||++..+ +..++.|||.+.
T Consensus       392 ~~psni~i~~~~~~~~~~~~~~~t  415 (524)
T KOG0601|consen  392 VKPSNILISNDGFFSKLGDFGCWT  415 (524)
T ss_pred             ccccceeeccchhhhhcccccccc
Confidence               78888765 777888888764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	100
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		4e-06
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		5e-06
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		6e-06
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		6e-06
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		6e-06
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		1e-05
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		1e-05
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		1e-05
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		1e-05
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		1e-05
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		1e-05
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		1e-05
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		1e-05
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		1e-05
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		1e-05
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-05
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		1e-05
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-05
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		1e-05
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		1e-05
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-05
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-05
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		1e-05
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		1e-05
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		2e-05
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		2e-05
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-05
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		2e-05
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		2e-05
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		2e-05
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		2e-05
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		2e-05
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		2e-05
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		2e-05
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		2e-05
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		2e-05
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		2e-05
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		2e-05
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		3e-04
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		3e-04
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		3e-04
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		3e-04

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 9   EEVPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFL--EYQANDLAYLLKYPKDSMDGY 66
           E +PS+ IRE+S L EL+HPNI+ L+ V+    CL L  E+   DL  +L   K  +   
Sbjct: 60  EGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDS 119
Query: 67  SIK 69
            IK
Sbjct: 120 QIK 122

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 9   EEVPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFL--EYQANDLAYLLKYPKDSMDGY 66
           E +PS+ IRE+S L EL+HPNI+ L+ V+    CL L  E+   DL  +L   K  +   
Sbjct: 60  EGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDS 119
Query: 67  SIK 69
            IK
Sbjct: 120 QIK 122

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 9/69 (13%)
Query: 2   MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDLAYLLKYP 59
           + +    E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+ + DL       
Sbjct: 39  IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDL------- 91
Query: 60  KDSMDGYSI 68
           KD MD  ++
Sbjct: 92  KDFMDASAL 100

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 9/69 (13%)
Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDLAYLLKYP 59
          + +    E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+ + DL       
Sbjct: 38 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDL------- 90
Query: 60 KDSMDGYSI 68
          KD MD  ++
Sbjct: 91 KDFMDASAL 99

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDLAYLLKYP 59
          + +    E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL       
Sbjct: 36 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL------- 88
Query: 60 KDSMDGYSI 68
          KD MD  ++
Sbjct: 89 KDFMDASAL 97

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 9  EEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDLAYLL 56
          E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL   +
Sbjct: 46 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFM 95

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/46 (50%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 9  EEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+ + DL
Sbjct: 46 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDL 91

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          + +    E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 36 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 88

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 9  EEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 46 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 91

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 9  EEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 50 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 95

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 9  EEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 47 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 92

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 9  EEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 50 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 95

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 9  EEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 47 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 92

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          + +    E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 36 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 88

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          + +    E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 36 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 88

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          + +    E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 38 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 90

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          + +    E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 37 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 89

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 9  EEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 46 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 91

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 9  EEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 45 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 90

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          + +    E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 36 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 88

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          + +    E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 38 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 90

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          + +    E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 37 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 89

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          + +    E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 35 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 87

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          + +    E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 35 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 87

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          + +    E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 36 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 88

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          + +    E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 37 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 89

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          + +    E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+ + DL
Sbjct: 37 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDL 89

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          + +    E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 36 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 88

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          + +    E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 35 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 87

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          + +    E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 36 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 88

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          + +    E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 37 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 89

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          + +    E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 35 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 87

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          + +    E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 36 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 88

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 9  EEVPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFLEYQAND 51
          E VPS+ IRE+S L ELNHPNI++L+ V+     L+L ++  D
Sbjct: 46 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVD 88

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          + +    E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 36 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 88

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          + +    E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL
Sbjct: 35 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDL 87

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 9   EEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL-AYLLKYPKDSM 63
           E VP + IREVS L EL H NII L  V+  +  L L  EY  NDL  Y+ K P  SM
Sbjct: 74  EGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSM 131

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 2  MEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFLEYQ 48
          + +    E VPS+ IRE+S L ELNHPNI++L+ V+     L+L ++
Sbjct: 35 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 81

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 6  NTMEEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDL 52
          ++ E  PS+ IRE+S + EL H NI+RL  V+     L L  E+  NDL
Sbjct: 41 DSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDL 89

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 9   EEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDLAYLLKYPKDSMDGY 66
           E +PS+ IRE+S L EL H NI++L  V+   + L L  E+   DL  LL   +  ++  
Sbjct: 41  EGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV 100
Query: 67  SIK 69
           + K
Sbjct: 101 TAK 103

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 9   EEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDLAYLLKYPKDSMDGY 66
           E +PS+ IRE+S L EL H NI++L  V+   + L L  E+   DL  LL   +  ++  
Sbjct: 41  EGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV 100
Query: 67  SIK 69
           + K
Sbjct: 101 TAK 103

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 9   EEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFLEYQANDLAYLLKYPKDSMDGY 66
           E +PS+ IRE+S L EL H NI++L  V+   + L L  E+   DL  LL   +  ++  
Sbjct: 41  EGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV 100
Query: 67  SIK 69
           + K
Sbjct: 101 TAK 103

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	100
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	2e-12
3niz_A	311	Rhodanese family protein; structural genomics, str	3e-12
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	3e-12
3o0g_A	292	Cell division protein kinase 5; kinase activator c	3e-12
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	7e-12
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-11
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	4e-11
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	4e-11
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	6e-11
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	1e-10
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	3e-09
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	5e-09
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	1e-08
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-08
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	2e-07
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	1e-06
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-06
4aoj_A	329	High affinity nerve growth factor receptor; transf	4e-06
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	1e-05
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	1e-05
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	1e-05
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-05
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-05
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	3e-05
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	3e-05
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	3e-05
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	3e-05
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	4e-05
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	4e-05
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	4e-05
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	4e-05
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	6e-05
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	6e-05
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	6e-05
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	7e-05
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	7e-05
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	8e-05
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	8e-05
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	9e-05
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-04
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	1e-04
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	1e-04
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	1e-04
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	1e-04
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-04
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-04
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-04
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-04
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-04
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	2e-04
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-04
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-04
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	3e-04
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-04
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	3e-04
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-04
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	3e-04
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	4e-04
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	4e-04
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	4e-04
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	4e-04
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	4e-04
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	5e-04
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	5e-04
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	6e-04
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	6e-04
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	6e-04
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	6e-04
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	6e-04
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	6e-04
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	7e-04
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	8e-04

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 60.3 bits (147), Expect = 2e-12
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 11  VPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFL--EYQANDLAYLLKYPKDSMDGYSI 68
           +  + +RE+  L EL+HPNII L+        + L  ++   DL  ++K     +    I
Sbjct: 55  INRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHI 114

Query: 69  K 69
           K
Sbjct: 115 K 115

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 59.9 bits (146), Expect = 3e-12
 Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 2/63 (3%)

Query: 9   EEVPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFL--EYQANDLAYLLKYPKDSMDGY 66
           E +PS+ IRE+S L EL+HPNI+ L+ V+    CL L  E+   DL  +L   K  +   
Sbjct: 60  EGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDS 119

Query: 67  SIK 69
            IK
Sbjct: 120 QIK 122

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 59.4 bits (145), Expect = 3e-12
 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)

Query: 9   EEVPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFL--EYQANDLAYLLKYPKDSMDGY 66
           E +PS+ IRE+S L EL H NI++L  V+     L L  E+   DL  LL   +  ++  
Sbjct: 41  EGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV 100

Query: 67  SIK 69
           + K
Sbjct: 101 TAK 103

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 59.5 bits (145), Expect = 3e-12
 Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 2/63 (3%)

Query: 9   EEVPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFL--EYQANDLAYLLKYPKDSMDGY 66
           E VPSS +RE+  L EL H NI+RL  V+     L L  E+   DL          +D  
Sbjct: 42  EGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPE 101

Query: 67  SIK 69
            +K
Sbjct: 102 IVK 104

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 58.8 bits (143), Expect = 7e-12
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 3/70 (4%)

Query: 3   EIHNTMEE-VPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFL--EYQANDLAYLLKYP 59
           EI    EE  P + IREVS L +L H NI+ L  ++     L L  EY   DL   L   
Sbjct: 34  EIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDC 93

Query: 60  KDSMDGYSIK 69
            + ++ +++K
Sbjct: 94  GNIINMHNVK 103

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 57.5 bits (140), Expect = 1e-11
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)

Query: 9   EEVPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFL--EYQANDLA-YLLKYPKDSMDG 65
           E VPS+ IRE+S L ELNHPNI++L+ V+     L+L  E+   DL  ++       +  
Sbjct: 43  EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL 102

Query: 66  YSIK 69
             IK
Sbjct: 103 PLIK 106

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 56.4 bits (137), Expect = 4e-11
 Identities = 15/71 (21%), Positives = 34/71 (47%), Gaps = 4/71 (5%)

Query: 3   EIHNTMEE--VPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFL--EYQANDLAYLLKY 58
           +   + ++  +    +RE+  L +L HPN++ L+ V  +   L L  EY  + + + L  
Sbjct: 35  KFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDR 94

Query: 59  PKDSMDGYSIK 69
            +  +  + +K
Sbjct: 95  YQRGVPEHLVK 105

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 56.5 bits (137), Expect = 4e-11
 Identities = 13/63 (20%), Positives = 30/63 (47%), Gaps = 2/63 (3%)

Query: 9   EEVPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFL--EYQANDLAYLLKYPKDSMDGY 66
           + V    +RE+  L +L H N++ L+ V  +    +L  E+  + +   L+   + +D  
Sbjct: 65  KMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQ 124

Query: 67  SIK 69
            ++
Sbjct: 125 VVQ 127

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 56.1 bits (136), Expect = 6e-11
 Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 3/58 (5%)

Query: 3  EIHNTMEE-VPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFL--EYQANDLAYLLK 57
          E+    EE  PS+ IRE+S + EL H NI+RL  V+     L L  E+  NDL   + 
Sbjct: 37 EVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMD 94

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 55.3 bits (134), Expect = 1e-10
 Identities = 24/50 (48%), Positives = 27/50 (54%), Gaps = 2/50 (4%)

Query: 9   EEVPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFL--EYQANDLAYLL 56
           E VP + IREVS L EL H NII L  V+     L L  EY  NDL   +
Sbjct: 74  EGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYM 123

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 51.5 bits (124), Expect = 3e-09
 Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 10/76 (13%)

Query: 4   IHNTMEEVPSSMIREVSCLMELNHPNIIRLM-LVVSQGLC-------LFL--EYQANDLA 53
           + N  E  P + +RE+  L  L H N++ L+ +  ++          ++L  ++  +DLA
Sbjct: 52  MENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLA 111

Query: 54  YLLKYPKDSMDGYSIK 69
            LL           IK
Sbjct: 112 GLLSNVLVKFTLSEIK 127

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 50.7 bits (122), Expect = 5e-09
 Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 11/77 (14%)

Query: 4   IHNTMEEVPSSMIREVSCLMELN---HPNIIRLMLVV-----SQGLCLFL--EYQANDLA 53
           +    E +P S IREV+ L  L    HPN++RL  V       +   L L  E+   DL 
Sbjct: 47  VQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLT 106

Query: 54  -YLLKYPKDSMDGYSIK 69
            YL K P+  +   +IK
Sbjct: 107 TYLDKVPEPGVPTETIK 123

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 49.4 bits (118), Expect = 1e-08
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 4/58 (6%)

Query: 9   EEVPSSMIREVSCLMELNHPNIIRLMLVV--SQGLCLFL--EYQANDLAYLLKYPKDS 62
             +  S  RE++ L EL HPN+I L  V        ++L  +Y  +DL +++K+ + S
Sbjct: 59  TGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRAS 116

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 11/72 (15%)

Query: 9   EEVPSSMIREVSCLMELN---HPNIIRLMLVV-----SQGLCLFL--EYQANDLA-YLLK 57
             +P S +REV+ L  L    HPN++RLM V       + + + L  E+   DL  YL K
Sbjct: 52  GGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDK 111

Query: 58  YPKDSMDGYSIK 69
            P   +   +IK
Sbjct: 112 APPPGLPAETIK 123

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 45.7 bits (109), Expect = 2e-07
 Identities = 23/116 (19%), Positives = 39/116 (33%), Gaps = 30/116 (25%)

Query: 6   NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQAN-DL-AYLLKYPKD 61
                     + E S + E N  +++RL+ VVSQG    + +E     DL +YL      
Sbjct: 66  AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPA 125

Query: 62  SMDGYSIKFSSSDSL--------------------------RCCLLSFGKTVKVAD 91
             +   +   S   +                          R C+++   TVK+ D
Sbjct: 126 MANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGD 181

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 43.8 bits (104), Expect = 1e-06
 Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 6   NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFLEYQAN-DLAYLLKYPKDSMD 64
             M E      REV  +  LNHPNI++L  ++     + +E+    DL + L      + 
Sbjct: 61  TEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIK 120

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 43.5 bits (103), Expect = 2e-06
 Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 1   MMEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQAN-DLAYLLK 57
           M E+    EE   + ++EV  +  L HPN+++ + V+ +   L    EY     L  ++K
Sbjct: 40  MKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIK 99

Query: 58  YPKDSMD 64
                  
Sbjct: 100 SMDSQYP 106

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 42.7 bits (101), Expect = 4e-06
 Identities = 24/111 (21%), Positives = 37/111 (33%), Gaps = 35/111 (31%)

Query: 16  IREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQAN-DL-AYLLKYPKDSMDGYSIKFS 71
            RE   L  L H +I+R   V ++G  L +  EY  + DL  +L  +  D+      +  
Sbjct: 91  QREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDV 150

Query: 72  SSDSL-------------------------------RCCLLSFGKTVKVAD 91
           +   L                               R CL+  G  VK+ D
Sbjct: 151 APGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGD 201

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 41.1 bits (97), Expect = 1e-05
 Identities = 14/106 (13%), Positives = 35/106 (33%), Gaps = 20/106 (18%)

Query: 6   NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG-LCLFLEYQAN-DLAYLLKYPKDSM 63
            T  +    ++ E   +  +++P++ RL+ +     + L  +      L   ++  KD++
Sbjct: 55  ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI 114

Query: 64  DGYSIKFSSSD---------SLRC---------CLLSFGKTVKVAD 91
               +                 R           L+   + VK+ D
Sbjct: 115 GSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITD 160

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 41.1 bits (97), Expect = 1e-05
 Identities = 23/107 (21%), Positives = 45/107 (42%), Gaps = 21/107 (19%)

Query: 6   NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQAN------------- 50
               ++ +  ++E   L + +HPNI+RL+ V +Q   + + +E                 
Sbjct: 150 TLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR 209

Query: 51  -DLAYLLKYPKDSMDG--Y--SIKFSSSD-SLRCCLLSFGKTVKVAD 91
             +  LL+   D+  G  Y  S      D + R CL++    +K++D
Sbjct: 210 LRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISD 256

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 41.2 bits (97), Expect = 1e-05
 Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 4/70 (5%)

Query: 6   NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQAN-DL-AYLLKYPKD 61
              E+     + E   + + NH NI+R + V  Q     + LE  A  DL ++L +    
Sbjct: 112 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 171

Query: 62  SMDGYSIKFS 71
                S+   
Sbjct: 172 PSQPSSLAML 181

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 40.8 bits (96), Expect = 2e-05
 Identities = 15/70 (21%), Positives = 27/70 (38%), Gaps = 4/70 (5%)

Query: 6   NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQAN-DL-AYLLKYPKD 61
              E+     + E   + + NH NI+R + V  Q     + +E  A  DL ++L +    
Sbjct: 71  VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPR 130

Query: 62  SMDGYSIKFS 71
                S+   
Sbjct: 131 PSQPSSLAML 140

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 40.7 bits (96), Expect = 2e-05
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 4/56 (7%)

Query: 6   NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQAN-DL-AYLLK 57
           N        ++ E + L ++NHP++I+L    SQ   L L +EY     L  +L +
Sbjct: 64  NASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRE 119

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 40.3 bits (94), Expect = 3e-05
 Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 3/55 (5%)

Query: 6   NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQAND--LAYLLK 57
            T +     M+RE   + +L++P I+RL+ V   + L L +E         +L+ 
Sbjct: 374 GTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVG 428

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 39.9 bits (94), Expect = 3e-05
 Identities = 18/106 (16%), Positives = 44/106 (41%), Gaps = 20/106 (18%)

Query: 6   NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG-LCLFLEYQAN-DLAYLLKYPKDSM 63
           +   +     + E   +  L+HP+I++L+ ++ +    + +E     +L + L+  K+S+
Sbjct: 51  DCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSL 110

Query: 64  DGYSIKFSSSD---------SLRC---------CLLSFGKTVKVAD 91
              ++   S           S+ C          L++  + VK+ D
Sbjct: 111 KVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGD 156

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 40.0 bits (94), Expect = 3e-05
 Identities = 13/32 (40%), Positives = 19/32 (59%)

Query: 16 IREVSCLMELNHPNIIRLMLVVSQGLCLFLEY 47
          I E+  L  +NHPNI++L       +CL +EY
Sbjct: 49 IVELRQLSRVNHPNIVKLYGACLNPVCLVMEY 80

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 39.8 bits (93), Expect = 3e-05
 Identities = 23/106 (21%), Positives = 49/106 (46%), Gaps = 20/106 (18%)

Query: 6   NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG-LCLFLEYQAN-DLAYLLKYPKDSM 63
            T + V    ++E   + + +HP+I++L+ V+++  + + +E     +L   L+  K S+
Sbjct: 429 CTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSL 488

Query: 64  D-----GYSIKFSSS----DSLRC---------CLLSFGKTVKVAD 91
           D      Y+ + S++    +S R           L+S    VK+ D
Sbjct: 489 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGD 534

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 39.5 bits (93), Expect = 4e-05
 Identities = 11/55 (20%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 6   NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG-LCLFLEYQAN-DL-AYLLK 57
            T + V    ++E   + + +HP+I++L+ V+++  + + +E     +L ++L  
Sbjct: 54  CTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQV 108

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 39.6 bits (93), Expect = 4e-05
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 4/56 (7%)

Query: 6   NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQAN-DL-AYLLK 57
               ++ +   RE + + E ++PNI++L+ V + G  +CL  EY A  DL  +L  
Sbjct: 88  EASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRS 143

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 39.5 bits (93), Expect = 4e-05
 Identities = 22/112 (19%), Positives = 34/112 (30%), Gaps = 36/112 (32%)

Query: 16  IREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQAN-DL-AYLLKYPKDSMDGYSIKFS 71
            RE   L  L H +I++   V   G  L +  EY  + DL  +L  +  D+M     +  
Sbjct: 65  QREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPR 124

Query: 72  SSDSL--------------------------------RCCLLSFGKTVKVAD 91
            +                                   R CL+     VK+ D
Sbjct: 125 QAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGD 176

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 39.6 bits (93), Expect = 4e-05
 Identities = 22/123 (17%), Positives = 43/123 (34%), Gaps = 32/123 (26%)

Query: 1   MMEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--------LCLFLEYQAN-D 51
           M++            +RE +C+ E +HP++ +L+ V  +           + L +  + D
Sbjct: 58  MLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGD 117

Query: 52  LAYLLKYPKDSMDGYSIKFS-----SSD---------SLRC---------CLLSFGKTVK 88
           L   L   +   + +++          D         S            C+L+   TV 
Sbjct: 118 LHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVC 177

Query: 89  VAD 91
           VAD
Sbjct: 178 VAD 180

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 39.2 bits (92), Expect = 6e-05
 Identities = 19/106 (17%), Positives = 37/106 (34%), Gaps = 20/106 (18%)

Query: 6   NTMEEVPSSMIREVSCLMELNHPNIIRLMLVV-SQGLCLFLEYQAN-DLAYLLKYPKDSM 63
            T +     M+RE   + +L++P I+RL+ V  ++ L L +E      L   L   ++ +
Sbjct: 48  GTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEI 107

Query: 64  DGYSIKFSSSD---------SLRC---------CLLSFGKTVKVAD 91
              ++                             LL      K++D
Sbjct: 108 PVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISD 153

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 20/122 (16%), Positives = 33/122 (27%), Gaps = 36/122 (29%)

Query: 6   NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQAN-DL-AYL------ 55
                +      E      L HPN++ L+ VV++   L +   Y ++ DL  +L      
Sbjct: 50  KAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPH 109

Query: 56  -LKYPKDSMDGYSIKFSSSD----------------SLRC---------CLLSFGKTVKV 89
                 D            D                S             L+     VK+
Sbjct: 110 SDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKI 169

Query: 90  AD 91
           +D
Sbjct: 170 SD 171

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 38.8 bits (91), Expect = 6e-05
 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 4/56 (7%)

Query: 6   NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQAN-DL-AYLLK 57
              E      + E S + + +HPNIIRL  VV++G    +  EY  N  L  +L  
Sbjct: 88  GYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT 143

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 38.8 bits (91), Expect = 7e-05
 Identities = 18/121 (14%), Positives = 37/121 (30%), Gaps = 35/121 (28%)

Query: 6   NTMEEVPSSMIREVSCLMEL-NHPNIIRLMLVVSQG--LCLFLEYQAN-DLAYLLKYPKD 61
               +   +++ E+  +  L  H NI+ L+   + G  + +  EY    DL   L+    
Sbjct: 87  TAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSR 146

Query: 62  SMDGYSIKFSSSDSL-------------------------------RCCLLSFGKTVKVA 90
            ++       ++ +                                R  LL+ G   K+ 
Sbjct: 147 VLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIG 206

Query: 91  D 91
           D
Sbjct: 207 D 207

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 38.8 bits (91), Expect = 7e-05
 Identities = 24/123 (19%), Positives = 38/123 (30%), Gaps = 37/123 (30%)

Query: 6   NTMEEVPSSMIREVSCLMEL-NHPNIIRLMLVVSQG--LCLFLEYQAN-DL-AYLLKYPK 60
              ++       E+  L +L +HPNII L+        L L +EY  + +L  +L K   
Sbjct: 63  YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV 122

Query: 61  DSMDGYSIKFSSSDSL--------------------------------RCCLLSFGKTVK 88
              D      +S+ S                                 R  L+      K
Sbjct: 123 LETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAK 182

Query: 89  VAD 91
           +AD
Sbjct: 183 IAD 185

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 38.9 bits (91), Expect = 8e-05
 Identities = 14/106 (13%), Positives = 35/106 (33%), Gaps = 20/106 (18%)

Query: 6   NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG-LCLFLEYQAN-DLAYLLKYPKDSM 63
            T  +    ++ E   +  +++P++ RL+ +     + L  +      L   ++  KD++
Sbjct: 55  ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI 114

Query: 64  DGYSIKFSSSD---------SLRC---------CLLSFGKTVKVAD 91
               +                 R           L+   + VK+ D
Sbjct: 115 GSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITD 160

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 38.9 bits (91), Expect = 8e-05
 Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 37/123 (30%)

Query: 6   NTMEEVPSSMIREVSCLMEL-NHPNIIRLMLVVSQG--LCLFLEYQAN-DL-AYLLK--- 57
           +  E+  S ++ E+  +  +  H NII L+   +Q   L + +EY +  +L  YL     
Sbjct: 124 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 183

Query: 58  ----YPKDSMDGYSIKFSSSDSLRC-------------------------CLLSFGKTVK 88
               Y  D       + +  D + C                          L++    +K
Sbjct: 184 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMK 243

Query: 89  VAD 91
           +AD
Sbjct: 244 IAD 246

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 38.4 bits (90), Expect = 9e-05
 Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 2/33 (6%)

Query: 17 REVSCLMELNHPNIIRLMLVV--SQGLCLFLEY 47
          REV  +  LNHPNI++L  V+   + L L +EY
Sbjct: 63 REVRIMKILNHPNIVKLFEVIETEKTLYLIMEY 95

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 38.4 bits (90), Expect = 1e-04
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 5/49 (10%)

Query: 14 SMIREVSCLMELNHPNIIRL----MLVVSQGLCLFLEY-QANDLAYLLK 57
           ++ EV+ L EL HPNI+R     +   +  L + +EY +  DLA ++ 
Sbjct: 51 MLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVIT 99

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 38.1 bits (89), Expect = 1e-04
 Identities = 25/123 (20%), Positives = 44/123 (35%), Gaps = 37/123 (30%)

Query: 6   NTMEEVPSSMIREVSCLMEL-NHPNIIRLMLVVSQG--LCLFLEYQAN-DL-AYLLK--- 57
           +  E+  S +I E+  +  +  H NII L+   +Q   L + +EY +  +L  YL     
Sbjct: 112 DATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRP 171

Query: 58  ----YPKDSMDGYSIKFSSSDSLRC-------------------------CLLSFGKTVK 88
               Y  +       + SS D + C                          L++    +K
Sbjct: 172 PGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMK 231

Query: 89  VAD 91
           +AD
Sbjct: 232 IAD 234

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 38.1 bits (89), Expect = 1e-04
 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 4/54 (7%)

Query: 6   NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQAN-DL-AYL 55
              E+     + E   + + +H NIIRL  V+S+   + +  EY  N  L  +L
Sbjct: 84  GYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFL 137

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 38.1 bits (89), Expect = 1e-04
 Identities = 23/114 (20%), Positives = 39/114 (34%), Gaps = 35/114 (30%)

Query: 6   NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQAN-DLAYLLKYPKDS 62
              E+     + E S + + +HPNIIRL  VV++   + +  EY  N  L   L+     
Sbjct: 84  GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA- 142

Query: 63  MDGYSIKFSSSDSL-------------------------RCCLLSFGKTVKVAD 91
                 +F+    +                         R  L++     KV+D
Sbjct: 143 ------QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSD 190

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 38.0 bits (89), Expect = 1e-04
 Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 37/123 (30%)

Query: 6   NTMEEVPSSMIREVSCLMEL-NHPNIIRLMLVVSQG--LCLFLEYQAN-DL-AYLLK--- 57
           +  E+  S ++ E+  +  +  H NII L+   +Q   L + +EY +  +L  YL     
Sbjct: 78  DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 137

Query: 58  ----YPKDSMDGYSIKFSSSDSLRC-------------------------CLLSFGKTVK 88
               Y  D       + +  D + C                          L++    +K
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMK 197

Query: 89  VAD 91
           +AD
Sbjct: 198 IAD 200

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 37.8 bits (88), Expect = 1e-04
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 3/47 (6%)

Query: 14  SMIREVSCLMELNHPNIIRLM--LVVSQGLCLFLEY-QANDLAYLLK 57
              REV+ L  + HPNI++       +  L + ++Y +  DL   + 
Sbjct: 69  ESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRIN 115

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 24/109 (22%)

Query: 6   NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG---LCLFLEYQAN-DLAYLLKYPKD 61
            T     S  + E   + + +HPN++ L+ +  +      + L Y  + DL   ++    
Sbjct: 64  ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 123

Query: 62  SM-------------DG--Y--SIKFSSSDSL--RCCLLSFGKTVKVAD 91
           +               G  Y  S KF   D L  R C+L    TVKVAD
Sbjct: 124 NPTVKDLIGFGLQVAKGMKYLASKKFVHRD-LAARNCMLDEKFTVKVAD 171

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 2/34 (5%)

Query: 16 IREVSCLMELNHPNIIRLMLVVSQG--LCLFLEY 47
           +E      L HPNII L  V  +   LCL +E+
Sbjct: 54 RQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEF 87

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 37.4 bits (87), Expect = 2e-04
 Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 24/109 (22%)

Query: 6   NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG---LCLFLEYQAN-DLAYLLKYPKD 61
            T     S  + E   + + +HPN++ L+ +  +      + L Y  + DL   ++    
Sbjct: 128 ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 187

Query: 62  SM-------------DG--Y--SIKFSSSDSL--RCCLLSFGKTVKVAD 91
           +               G  +  S KF   D L  R C+L    TVKVAD
Sbjct: 188 NPTVKDLIGFGLQVAKGMKFLASKKFVHRD-LAARNCMLDEKFTVKVAD 235

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 37.3 bits (87), Expect = 2e-04
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 3/48 (6%)

Query: 16  IREVSCLMELNHPNIIRL--MLVVSQGLCLFLEYQAN-DLAYLLKYPK 60
           I+E+  L +LNHPN+I+     +    L + LE     DL+ ++K+ K
Sbjct: 80  IKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFK 127

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 37.3 bits (87), Expect = 2e-04
 Identities = 25/110 (22%), Positives = 39/110 (35%), Gaps = 24/110 (21%)

Query: 5   HNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG----LCLFLEYQAN-DLAYLLKYP 59
           H+T E +     RE+  L  L H NI++   V        L L +EY     L   L+  
Sbjct: 49  HSTEEHL-RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH 107

Query: 60  KDSMDGYSIKFSSSD---------SLRC---------CLLSFGKTVKVAD 91
           K+ +D   +   +S          + R           L+     VK+ D
Sbjct: 108 KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGD 157

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 37.2 bits (87), Expect = 2e-04
 Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 24/109 (22%)

Query: 6   NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG---LCLFLEYQAN-DLAYLLKYPKD 61
            T  +   + +RE   +  LNHPN++ L+ ++        + L Y  + DL   ++ P+ 
Sbjct: 60  ITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQR 119

Query: 62  SM-------------DG--Y--SIKFSSSDSLRC--CLLSFGKTVKVAD 91
           +               G  Y    KF   D L    C+L    TVKVAD
Sbjct: 120 NPTVKDLISFGLQVARGMEYLAEQKFVHRD-LAARNCMLDESFTVKVAD 167

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 37.3 bits (87), Expect = 2e-04
 Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 6/48 (12%)

Query: 6   NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG---LCLFLEYQAN 50
           +   +   + + E S + +L H N+++L+ V+ +    L +  EY A 
Sbjct: 227 DATAQ---AFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAK 271

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 37.3 bits (87), Expect = 3e-04
 Identities = 25/124 (20%), Positives = 42/124 (33%), Gaps = 35/124 (28%)

Query: 1   MMEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG-------LCLFLEYQAN-DL 52
            M++ N+ +      + E +C+ + +HPN+IRL+ V  +          + L +    DL
Sbjct: 69  TMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDL 128

Query: 53  AYLLKYPKDSMDGYSIKFSSSDSLRC-------------------------CLLSFGKTV 87
              L Y +       I       L+                          C+L    TV
Sbjct: 129 HTYLLYSRLETGPKHI--PLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTV 186

Query: 88  KVAD 91
            VAD
Sbjct: 187 CVAD 190

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 36.9 bits (86), Expect = 3e-04
 Identities = 19/107 (17%), Positives = 34/107 (31%), Gaps = 21/107 (19%)

Query: 6   NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG----LCLFLEYQAN-DL-AYLLKYP 59
           +   +  S   +E+  L  L H +II+            L L +EY     L  YL ++ 
Sbjct: 71  DAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS 130

Query: 60  KDSMD--GYSIKFSSS----DSLRC---------CLLSFGKTVKVAD 91
                   ++ +         +             LL   + VK+ D
Sbjct: 131 IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGD 177

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 36.9 bits (86), Expect = 3e-04
 Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 3/67 (4%)

Query: 1   MMEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQAN-DLAYLLK 57
           +++I    E+   +  REV    +  H N++  M        L +         L  +++
Sbjct: 62  LIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVR 121

Query: 58  YPKDSMD 64
             K  +D
Sbjct: 122 DAKIVLD 128

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 37.0 bits (86), Expect = 3e-04
 Identities = 25/110 (22%), Positives = 39/110 (35%), Gaps = 24/110 (21%)

Query: 5   HNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG----LCLFLEYQAN-DLAYLLKYP 59
           H+T E +     RE+  L  L H NI++   V        L L +EY     L   L+  
Sbjct: 80  HSTEEHL-RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH 138

Query: 60  KDSMDGYSIKFSSSD---------SLRC---------CLLSFGKTVKVAD 91
           K+ +D   +   +S          + R           L+     VK+ D
Sbjct: 139 KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGD 188

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 36.9 bits (86), Expect = 4e-04
 Identities = 19/124 (15%), Positives = 38/124 (30%), Gaps = 38/124 (30%)

Query: 6   NTMEEVPSSMIREVSCLMEL-NHPNIIRLMLVVSQG---LCLFLEYQAN-DL-AYLLK-- 57
                   +++ E+  L+ + +H N++ L+   ++    L + +E+    +L  YL    
Sbjct: 68  GATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR 127

Query: 58  -----YPKDSMDGYSIKFSSSDSLRC-------------------------CLLSFGKTV 87
                Y     D Y    +    +                            LLS    V
Sbjct: 128 NEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVV 187

Query: 88  KVAD 91
           K+ D
Sbjct: 188 KICD 191

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 36.9 bits (86), Expect = 4e-04
 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 4/53 (7%)

Query: 9   EEVPSSMIREVSCLMELNHPN--IIRL--MLVVSQGLCLFLEYQANDLAYLLK 57
            +   S   E++ L +L   +  IIRL    +  Q + + +E    DL   LK
Sbjct: 67  NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLK 119

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 36.5 bits (85), Expect = 4e-04
 Identities = 11/66 (16%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 1   MMEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG-LCLFLEYQAN-DLAYLLKY 58
           M+ +     +   +   EV  L +  H NI+  M   +   L +  ++     L + L  
Sbjct: 53  MLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHA 112

Query: 59  PKDSMD 64
            +   +
Sbjct: 113 SETKFE 118

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 36.7 bits (85), Expect = 4e-04
 Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 4/38 (10%)

Query: 14 SMIREVSCLMELNHPNIIRLMLVV----SQGLCLFLEY 47
            +RE   L +LNH NI++L  +     ++   L +E+
Sbjct: 53 VQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF 90

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 36.8 bits (85), Expect = 4e-04
 Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 4/38 (10%)

Query: 14 SMIREVSCLMELNHPNIIRLMLVV----SQGLCLFLEY 47
            +RE   L +LNH NI++L  +     ++   L +E+
Sbjct: 53 VQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF 90

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 36.5 bits (85), Expect = 5e-04
 Identities = 16/110 (14%), Positives = 33/110 (30%), Gaps = 25/110 (22%)

Query: 7   TMEEVPSSM-----IREVSCLMELNHPNIIRLMLVVSQG-LCLFLEYQAN-DLAYLLKYP 59
            +E+             +  +  L+H +I+RL+ +     L L  +Y     L   ++  
Sbjct: 49  VIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQH 108

Query: 60  KDSMDGYSIKFSSSD---------SLRC---------CLLSFGKTVKVAD 91
           + ++    +                             LL     V+VAD
Sbjct: 109 RGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVAD 158

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 36.3 bits (84), Expect = 5e-04
 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 4/48 (8%)

Query: 14  SMIREVSCLMELNHPN--IIRL--MLVVSQGLCLFLEYQANDLAYLLK 57
           S   E++ L +L   +  IIRL    +  Q + + +E    DL   LK
Sbjct: 100 SYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLK 147

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 36.6 bits (84), Expect = 6e-04
 Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 8/39 (20%)

Query: 17 REVSCLMELNHPNIIRL--------MLVVSQGLCLFLEY 47
           E+  + +LNHPN++           L  +    L +EY
Sbjct: 61 LEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEY 99

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 36.1 bits (84), Expect = 6e-04
 Identities = 16/109 (14%), Positives = 37/109 (33%), Gaps = 23/109 (21%)

Query: 6   NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG----LCLFLEYQAN-DLAYLLKYPK 60
            +     + + +E+  L  L H NI++   + ++     + L +E+  +  L   L   K
Sbjct: 61  ESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK 120

Query: 61  DSMDGYSIKFSSSD---------SLRC---------CLLSFGKTVKVAD 91
           + ++       +           S +           L+     VK+ D
Sbjct: 121 NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGD 169

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 36.1 bits (84), Expect = 6e-04
 Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 6  NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEY 47
              + P ++ +E+     LNH N+++      +G    LFLEY
Sbjct: 43 KRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 36.1 bits (84), Expect = 6e-04
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 17  REVSCLMELNHPNIIRLMLVVSQG--LCLFLEY 47
           REV+ +  L HPNI+  M  V+Q   L +  EY
Sbjct: 83  REVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEY 115

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 36.0 bits (84), Expect = 6e-04
 Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 6  NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEY 47
              + P ++ +E+     LNH N+++      +G    LFLEY
Sbjct: 43 KRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 36.1 bits (84), Expect = 6e-04
 Identities = 8/37 (21%), Positives = 21/37 (56%), Gaps = 2/37 (5%)

Query: 16 IREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQAN 50
          ++E + + E+ HPN+++L+ V ++     +  E+   
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY 93

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 36.1 bits (84), Expect = 7e-04
 Identities = 9/46 (19%), Positives = 23/46 (50%), Gaps = 3/46 (6%)

Query: 15  MIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQAND--LAYLLK 57
           ++ E + + +L++P I+R++ +   +   L +E         YL +
Sbjct: 65  LLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQ 110

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 35.9 bits (83), Expect = 8e-04
 Identities = 11/49 (22%), Positives = 25/49 (51%), Gaps = 4/49 (8%)

Query: 4   IHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQAN 50
             +TME      ++E + + E+ HPN+++L+ V ++     +  E+   
Sbjct: 254 KEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY 300

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	100
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.88
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.87
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.87
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.87
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.86
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.85
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.84
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.84
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.84
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.83
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.81
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.8
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.79
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.78
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.76
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.75
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.73
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.69
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.68
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.67
3niz_A	311	Rhodanese family protein; structural genomics, str	99.67
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.67
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.66
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.66
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.66
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.66
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.66
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.65
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.64
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.64
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.64
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.64
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.64
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.63
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.63
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.63
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.63
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.63
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.62
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.62
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.62
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.61
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.61
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.61
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.61
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.61
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.61
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.61
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.61
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.6
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.6
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.6
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.6
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.6
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.6
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.6
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.6
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.6
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.6
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.6
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.6
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.6
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.6
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.59
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.59
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.59
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.59
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.59
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.59
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.59
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.59
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.59
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.59
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.59
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.59
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.59
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.59
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.58
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.58
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.58
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.58
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.58
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.58
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.58
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.58
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.58
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.58
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.58
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.58
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.58
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.57
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.57
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.57
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.57
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.57
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.57
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.57
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.57
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.57
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.56
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.56
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.56
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.56
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.56
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.56
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.56
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.55
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.55
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.55
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.55
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.55
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.55
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.55
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.54
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.54
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.54
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.54
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.54
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.54
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.54
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.53
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.53
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.53
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.53
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.53
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.53
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.53
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.53
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.53
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.53
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.53
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.53
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.53
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.53
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.53
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.52
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.52
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.52
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.52
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.52
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.52
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.52
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.52
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.52
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.52
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.52
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.52
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.52
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.52
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.51
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.51
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.51
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.51
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.51
3bhy_A	283	Death-associated protein kinase 3; death associate	99.51
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.51
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.51
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.51
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.51
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.5
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.5
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.5
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.5
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.5
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.5
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.5
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.5
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.49
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.49
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.49
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.49
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.49
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.49
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.48
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.48
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.48
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.47
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.47
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.47
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.47
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.47
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.47
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.47
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.47
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.47
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.47
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.46
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.46
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.46
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.46
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.46
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.45
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.45
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.45
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.45
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.45
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.45
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.44
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.44
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.44
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.44
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.43
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.43
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.43
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.43
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.43
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.42
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.42
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.42
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.41
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.41
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.41
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.4
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.4
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.39
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.39
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.38
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.38
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.38
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.38
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.37
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.37
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.37
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.37
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.36
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.35
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.35
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.35
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.34
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.34
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.33
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.33
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.32
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.31
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.31
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.3
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.3
3uqc_A	286	Probable conserved transmembrane protein; structur	99.29
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.27
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.27
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.25
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.24
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.24
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.23
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.23
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.23
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.2
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.19
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.18
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.16
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.09
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.02
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	98.52
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.42
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	96.86
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	96.43
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	96.37
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	95.0
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	94.95
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	88.49
3oja_A	487	Leucine-rich immune molecule 1; coiled-coil, helix	86.44
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	81.22

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.88  E-value=2.1e-22  Score=125.35  Aligned_cols=92  Identities=18%  Similarity=0.219  Sum_probs=81.8

Q ss_pred             CCCCcchhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------
Q 034245            6 NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus         6 ~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------   76 (100)
                      ..+++..+.|.+|+.++++++|||||++++++. +.+++|+||++ |+|.+++.....++++..+..++.|++       
T Consensus        70 ~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH  149 (307)
T 3omv_A           70 DPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH  149 (307)
T ss_dssp             SCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            344445678999999999999999999999888 88999999999 999999977665699999999998877       


Q ss_pred             -----------hcccccCCCeEEEeecCCCCC
Q 034245           77 -----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                 +||+++.++.+||+|||+|..
T Consensus       150 ~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~  181 (307)
T 3omv_A          150 AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATV  181 (307)
T ss_dssp             HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC
T ss_pred             HCCccCCccCHHHEEECCCCcEEEeeccCcee
Confidence                       899999999999999999864

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.87  E-value=1e-21  Score=124.03  Aligned_cols=92  Identities=20%  Similarity=0.184  Sum_probs=80.5

Q ss_pred             CCCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH------
Q 034245            7 TMEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL------   76 (100)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~------   76 (100)
                      .+.+..+.+.+|+.+++.++|||||++++++.  +.+|+||||++ |+|.+++.... ..+++..+..++.|++      
T Consensus        62 ~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~yl  141 (350)
T 4b9d_A           62 MSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV  141 (350)
T ss_dssp             SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            34445678999999999999999999999999  88999999999 99999997544 3378899999998876      


Q ss_pred             ------------hcccccCCCeEEEeecCCCCCC
Q 034245           77 ------------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 ------------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                                  +||+++.++.+||+|||+|...
T Consensus       142 H~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~  175 (350)
T 4b9d_A          142 HDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL  175 (350)
T ss_dssp             HHTTCEETTCCGGGEEECTTCCEEECSTTEESCC
T ss_pred             HHCCeeeccCCHHHEEECCCCCEEEcccccceee
Confidence                        9999999999999999999754

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.87  E-value=5.4e-22  Score=123.10  Aligned_cols=93  Identities=20%  Similarity=0.333  Sum_probs=80.6

Q ss_pred             ccCCCCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC------------CCCCHHHH
Q 034245            4 IHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK------------DSMDGYSI   68 (100)
Q Consensus         4 ~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~------------~~~~~~~~   68 (100)
                      +.....+..+.+.+|+.++++++|||||+++++|.  +.+++++||++ |+|.+++...+            ..+++..+
T Consensus        51 l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~  130 (299)
T 4asz_A           51 LKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQM  130 (299)
T ss_dssp             ECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHH
T ss_pred             eCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHH
Confidence            34444455678999999999999999999999998  88999999999 99999997532            34899999


Q ss_pred             HHHHHHhH------------------hcccccCCCeEEEeecCCCC
Q 034245           69 KFSSSDSL------------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        69 ~~~~~~~~------------------~nil~~~~~~~ki~dfgl~~   96 (100)
                      ..++.|++                  +||+++.++.+||+|||+|.
T Consensus       131 ~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~  176 (299)
T 4asz_A          131 LHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSR  176 (299)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHH
T ss_pred             HHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcccce
Confidence            99999877                  89999999999999999984

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.87  E-value=1.2e-21  Score=122.84  Aligned_cols=94  Identities=24%  Similarity=0.343  Sum_probs=78.3

Q ss_pred             ccCCCCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC--------------CCCCHH
Q 034245            4 IHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK--------------DSMDGY   66 (100)
Q Consensus         4 ~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~--------------~~~~~~   66 (100)
                      +...++...+.|.+|+.++++++|||||+++++|.  ..+++|+||++ |+|.+++....              .++++.
T Consensus        79 l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~  158 (329)
T 4aoj_A           79 LKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG  158 (329)
T ss_dssp             ESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHH
T ss_pred             ECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHH
Confidence            34444555678999999999999999999999999  88999999999 99999987542              248899


Q ss_pred             HHHHHHHHhH------------------hcccccCCCeEEEeecCCCCC
Q 034245           67 SIKFSSSDSL------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        67 ~~~~~~~~~~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      .+..++.|++                  +||+++.++.+||+|||+|..
T Consensus       159 ~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~  207 (329)
T 4aoj_A          159 QLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRD  207 (329)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC----
T ss_pred             HHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEccccccee
Confidence            9999998877                  999999999999999999864

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.86  E-value=2.1e-21  Score=122.40  Aligned_cols=88  Identities=17%  Similarity=0.232  Sum_probs=79.1

Q ss_pred             CCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH--------
Q 034245            8 MEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~--------   76 (100)
                      +....+.+.+|+.+++.++|||||++++++.  +.+|+||||++ |+|.+++...  ++++..+..++.|++        
T Consensus       111 ~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH~  188 (346)
T 4fih_A          111 KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHA  188 (346)
T ss_dssp             GCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence            3445677899999999999999999999999  89999999999 9999998764  399999999999977        


Q ss_pred             ----------hcccccCCCeEEEeecCCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                +||+++.++.+||+|||+|..
T Consensus       189 ~~IiHRDlKp~NILl~~~g~vKl~DFGla~~  219 (346)
T 4fih_A          189 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ  219 (346)
T ss_dssp             TTEECCCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             CCcccccCCHHHEEECCCCCEEEecCcCcee
Confidence                      999999999999999999864

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.85  E-value=4.4e-21  Score=123.59  Aligned_cols=90  Identities=17%  Similarity=0.215  Sum_probs=80.3

Q ss_pred             CCCCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------
Q 034245            6 NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------   76 (100)
Q Consensus         6 ~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------   76 (100)
                      ..+....+.+.+|+.+++.++|||||+++++|.  +.+|+|||||+ |+|.++++..  .+++..+..+++|++      
T Consensus       186 ~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~yl  263 (423)
T 4fie_A          186 LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVL  263 (423)
T ss_dssp             STTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHH
Confidence            344455677999999999999999999999999  89999999999 9999998764  389999999999977      


Q ss_pred             ------------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                  +||+++.+|.+||+|||+|..
T Consensus       264 H~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~  296 (423)
T 4fie_A          264 HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ  296 (423)
T ss_dssp             HHTTEECCCCSTTTEEECTTCCEEECCCTTCEE
T ss_pred             HHCCeecccCCHHHEEEcCCCCEEEecCccceE
Confidence                        999999999999999999864

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.84  E-value=7e-21  Score=118.60  Aligned_cols=87  Identities=17%  Similarity=0.307  Sum_probs=79.1

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      +....+.+|+.+++.++|||||++++++.  +.+|++|||++ |+|.+.+...+. +++..+..++.|++          
T Consensus        74 ~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~~~~~-l~e~~~~~~~~qi~~al~ylH~~~  152 (311)
T 4aw0_A           74 NKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKG  152 (311)
T ss_dssp             TCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34567899999999999999999999999  88999999999 999999987654 99999999999976          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +||+++.++.+||+|||+|..
T Consensus       153 IiHRDlKPeNILl~~~g~vKl~DFGla~~  181 (311)
T 4aw0_A          153 IIHRDLKPENILLNEDMHIQITDFGTAKV  181 (311)
T ss_dssp             EECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             CccCCCCHHHeEEcCCCCEEEEEcCCcee
Confidence                    999999999999999999864

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.84  E-value=1.9e-20  Score=116.59  Aligned_cols=89  Identities=22%  Similarity=0.278  Sum_probs=77.3

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC---------------CCCCHHHHHH
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK---------------DSMDGYSIKF   70 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~---------------~~~~~~~~~~   70 (100)
                      ....+.|.+|+.++++++|||||+++++|.  ..+++|+||++ |+|.+++....               ..+++..+..
T Consensus        70 ~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  149 (308)
T 4gt4_A           70 GPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH  149 (308)
T ss_dssp             C-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHH
Confidence            344578999999999999999999999998  88999999999 99999996431               2378888888


Q ss_pred             HHHHhH------------------hcccccCCCeEEEeecCCCCC
Q 034245           71 SSSDSL------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        71 ~~~~~~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      ++.|++                  +||+++.++.+||+|||+|..
T Consensus       150 i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~  194 (308)
T 4gt4_A          150 LVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE  194 (308)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSCCBCG
T ss_pred             HHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCccccee
Confidence            888877                  899999999999999999853

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.84  E-value=2.4e-20  Score=114.55  Aligned_cols=88  Identities=25%  Similarity=0.335  Sum_probs=77.4

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      .+....+.+|+.+++.++||||+++++++.  +.+|++|||++|+|.+.+.... ++++..+..+++|++          
T Consensus        54 ~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH~~~  132 (275)
T 3hyh_A           54 SDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHK  132 (275)
T ss_dssp             --CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            334567899999999999999999999999  8899999999999999987765 499999999999977          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +||+++.++.+||+|||+|..
T Consensus       133 IiHRDiKP~NILl~~~~~vkl~DFGla~~  161 (275)
T 3hyh_A          133 IVHRDLKPENLLLDEHLNVKIADFGLSNI  161 (275)
T ss_dssp             CCCCCCCTTTEEECTTCCEEECCSSCC--
T ss_pred             cccccCChHHeEECCCCCEEEeecCCCee
Confidence                    899999999999999999964

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.83  E-value=2.4e-20  Score=115.34  Aligned_cols=87  Identities=23%  Similarity=0.222  Sum_probs=75.8

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee------ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS------QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~------~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------   76 (100)
                      ...+.+.+|+.+++.++|||||+++++|.      ..+|++|||++ |+|.+++.... .+++..+..+++|++      
T Consensus        67 ~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~yl  145 (290)
T 3fpq_A           67 SERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFL  145 (290)
T ss_dssp             HHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH
Confidence            34567999999999999999999999986      45899999999 99999998754 489999999988876      


Q ss_pred             --------------hccccc-CCCeEEEeecCCCCC
Q 034245           77 --------------RCCLLS-FGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------------~nil~~-~~~~~ki~dfgl~~~   97 (100)
                                    +||+++ .++.+||+|||+|..
T Consensus       146 H~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~  181 (290)
T 3fpq_A          146 HTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL  181 (290)
T ss_dssp             HTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred             HHCCCCEEecccChhheeEECCCCCEEEEeCcCCEe
Confidence                          899997 479999999999864

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.81  E-value=3.6e-21  Score=119.60  Aligned_cols=85  Identities=24%  Similarity=0.252  Sum_probs=72.2

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||||++++++.  +.+|++|||++ |+|.+++..... +++..+..+++|++            
T Consensus        70 ~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~-l~e~~~~~~~~qi~~aL~ylH~~~Ii  148 (304)
T 3ubd_A           70 RVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM-FTEEDVKFYLAELALALDHLHSLGII  148 (304)
T ss_dssp             CC------CCCCCCCCTTEECEEEEEEETTEEEEEECCCTTCEEHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence            346889999999999999999999999  88999999999 999999987653 99999999999976            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +||+++.++.+||+|||+|..
T Consensus       149 HRDlKp~NILl~~~g~vKl~DFGla~~  175 (304)
T 3ubd_A          149 YRDLKPENILLDEEGHIKLTDFGLSKE  175 (304)
T ss_dssp             CSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred             CCCCCHHHeEEcCCCCEEeccccccee
Confidence                  899999999999999999854

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.80  E-value=1.7e-19  Score=113.42  Aligned_cols=82  Identities=20%  Similarity=0.213  Sum_probs=74.2

Q ss_pred             HHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------------
Q 034245           15 MIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------------   76 (100)
Q Consensus        15 ~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------------   76 (100)
                      ..+|+.+++.++|||||++++++.  +.+|++|||++ |+|.++++..+ .+++..+..++.|++               
T Consensus        97 ~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~~IiHRD  175 (336)
T 4g3f_A           97 RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHTRRILHGD  175 (336)
T ss_dssp             CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTTEECSC
T ss_pred             HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecc
Confidence            358999999999999999999998  88999999999 99999998765 499999999999977               


Q ss_pred             ---hcccccCCC-eEEEeecCCCCC
Q 034245           77 ---RCCLLSFGK-TVKVADLQALDW   97 (100)
Q Consensus        77 ---~nil~~~~~-~~ki~dfgl~~~   97 (100)
                         +||+++.++ .+||+|||+|..
T Consensus       176 lKp~NILl~~~g~~vKl~DFGla~~  200 (336)
T 4g3f_A          176 VKADNVLLSSDGSRAALCDFGHALC  200 (336)
T ss_dssp             CCGGGEEECTTSCCEEECCCTTCEE
T ss_pred             cCHHHEEEeCCCCEEEEeeCCCCeE
Confidence               999999887 699999999853

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.79  E-value=8.9e-19  Score=112.28  Aligned_cols=87  Identities=16%  Similarity=0.252  Sum_probs=77.1

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-----
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-----   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-----   76 (100)
                      .....+.||+.+|+.++|||||++++++.        ..+|+||||++|+|.+.+.... ++++..+..+++|++     
T Consensus        95 ~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~g~L~~~i~~~~-~l~~~~~~~~~~qil~al~y  173 (398)
T 4b99_A           95 TNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKY  173 (398)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEECCSEEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHH
Confidence            34467889999999999999999999865        4689999999988999998765 499999999999977     


Q ss_pred             -------------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                   +||+++.++.+|++|||+|..
T Consensus       174 lH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~  207 (398)
T 4b99_A          174 MHSAQVIHRDLKPSNLLVNENCELKIGDFGMARG  207 (398)
T ss_dssp             HHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred             HHHCcCcCCCcCccccccCCCCCEEEeecceeee
Confidence                         999999999999999999864

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.78  E-value=1.6e-18  Score=107.56  Aligned_cols=87  Identities=17%  Similarity=0.190  Sum_probs=72.0

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--c------------cEEEEEeccc-ccHHHHhccCCC--CCCHHHHHHHHH
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--Q------------GLCLFLEYQA-NDLAYLLKYPKD--SMDGYSIKFSSS   73 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~------------~~~lv~e~~~-~~l~~~l~~~~~--~~~~~~~~~~~~   73 (100)
                      ..+.+.+|+.+++.++|||||++++++.  +            .+|++|||++ |+|.+++.....  ..+...+..++.
T Consensus        46 ~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~  125 (299)
T 4g31_A           46 AREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFL  125 (299)
T ss_dssp             HHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHH
Confidence            3567899999999999999999999986  2            3799999999 999999986542  145566777777


Q ss_pred             HhH------------------hcccccCCCeEEEeecCCCCC
Q 034245           74 DSL------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        74 ~~~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      |++                  +||+++.++.+||+|||+|..
T Consensus       126 qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~  167 (299)
T 4g31_A          126 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTA  167 (299)
T ss_dssp             HHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC--
T ss_pred             HHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCcccee
Confidence            766                  899999999999999999864

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.76  E-value=1.6e-18  Score=109.62  Aligned_cols=87  Identities=21%  Similarity=0.264  Sum_probs=74.5

Q ss_pred             chhhHHHHHHHHhhCCC-Ccceeeeeeee---ccEEEEEeccc-ccHHHHhccCC---------------CCCCHHHHHH
Q 034245           11 VPSSMIREVSCLMELNH-PNIIRLMLVVS---QGLCLFLEYQA-NDLAYLLKYPK---------------DSMDGYSIKF   70 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h-~~iv~l~~~~~---~~~~lv~e~~~-~~l~~~l~~~~---------------~~~~~~~~~~   70 (100)
                      ....+.+|+.+++.+.| ||||+++++|.   ..+++++|||+ |+|.++++...               ..+++..+..
T Consensus       110 ~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  189 (353)
T 4ase_A          110 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC  189 (353)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHH
Confidence            34568999999999965 89999999986   56899999999 99999996532               2378888888


Q ss_pred             HHHHhH------------------hcccccCCCeEEEeecCCCCC
Q 034245           71 SSSDSL------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        71 ~~~~~~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      ++.|++                  +||+++.++.+||+|||+|..
T Consensus       190 ~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~  234 (353)
T 4ase_A          190 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD  234 (353)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSC
T ss_pred             HHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEECcchhhhh
Confidence            888876                  999999999999999999964

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.75  E-value=4.3e-18  Score=113.24  Aligned_cols=87  Identities=11%  Similarity=0.175  Sum_probs=77.5

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ..+.+.+|+.+|+.++||||+++++++.  ..+|++|||++ |+|.+++......+++..+..+++|++           
T Consensus       197 ~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~i  276 (573)
T 3uto_A          197 DKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNY  276 (573)
T ss_dssp             HHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             hHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            3567889999999999999999999999  89999999999 999999976655699999999999976           


Q ss_pred             -------hcccccCC--CeEEEeecCCCCC
Q 034245           77 -------RCCLLSFG--KTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~--~~~ki~dfgl~~~   97 (100)
                             +||+++.+  +.+||+|||+|..
T Consensus       277 iHRDlKp~Nill~~~~~~~vKl~DFG~a~~  306 (573)
T 3uto_A          277 VHLDLKPENIMFTTKRSNELKLIDFGLTAH  306 (573)
T ss_dssp             ECCCCCGGGEEESSSSCCCEEECCCSSCEE
T ss_pred             eeccCChhhccccCCCCCCEEEeeccceeE
Confidence                   89999854  8999999999864

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.73  E-value=1.1e-17  Score=103.80  Aligned_cols=78  Identities=19%  Similarity=0.158  Sum_probs=66.0

Q ss_pred             HHHHHHhhCCCCcceeeeeeee------ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           17 REVSCLMELNHPNIIRLMLVVS------QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        17 ~e~~~l~~l~h~~iv~l~~~~~------~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      +|+..+..++|||||++++++.      ..+|+|+||++ |+|.++++...  +++.....++.|++             
T Consensus        46 ~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~--l~~~~~~~i~~~ia~gl~ylH~~~~~~  123 (303)
T 3hmm_A           46 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIVGT  123 (303)
T ss_dssp             HHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCST
T ss_pred             HHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence            4555556789999999999987      25799999999 99999998653  78888877777755             


Q ss_pred             -------------hcccccCCCeEEEeecCCCC
Q 034245           77 -------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -------------~nil~~~~~~~ki~dfgl~~   96 (100)
                                   +||+++.++.+||+|||+|.
T Consensus       124 ~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~  156 (303)
T 3hmm_A          124 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  156 (303)
T ss_dssp             TCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             cCCCCEeeccCCcccEEECCCCCEEEEeCCCCc
Confidence                         89999999999999999974

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.69  E-value=7.5e-17  Score=108.73  Aligned_cols=79  Identities=19%  Similarity=0.226  Sum_probs=71.2

Q ss_pred             HHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------------
Q 034245           18 EVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------------   76 (100)
Q Consensus        18 e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------------   76 (100)
                      ++.+++.++|||||+++++|.  ..+|+||||++ |+|...+...+. +++..+..++.|++                  
T Consensus       242 ~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~~~~~-l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKP  320 (689)
T 3v5w_A          242 MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV-FSEADMRFYAAEIILGLEHMHNRFVVYRDLKP  320 (689)
T ss_dssp             HHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHTTTEECCCCSG
T ss_pred             HHHHHhhCCCCCEeEEEEEEEECCEEEEEEecCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCccccCCch
Confidence            456677889999999999999  89999999999 999999987654 99999999999976                  


Q ss_pred             hcccccCCCeEEEeecCCCCC
Q 034245           77 RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ~nil~~~~~~~ki~dfgl~~~   97 (100)
                      +||+++.+|.+||+|||+|..
T Consensus       321 eNILld~~G~vKL~DFGlA~~  341 (689)
T 3v5w_A          321 ANILLDEHGHVRISDLGLACD  341 (689)
T ss_dssp             GGEEECTTSCEEECCCTTCEE
T ss_pred             HHeEEeCCCCEEecccceeee
Confidence            999999999999999999864

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.68  E-value=3.7e-16  Score=96.55  Aligned_cols=91  Identities=24%  Similarity=0.299  Sum_probs=79.9

Q ss_pred             CCCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------
Q 034245            7 TMEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------   76 (100)
                      .+......+.+|+.+++.++||||+++++++.  ...++++||++ ++|.+++......+++..+..++.|++       
T Consensus        46 ~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH  125 (310)
T 3s95_A           46 FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH  125 (310)
T ss_dssp             CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            34445667899999999999999999999998  88999999999 899999987655689999888888876       


Q ss_pred             -----------hcccccCCCeEEEeecCCCCC
Q 034245           77 -----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                 +||+++.++.+||+|||++..
T Consensus       126 ~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~  157 (310)
T 3s95_A          126 SMNIIHRDLNSHNCLVRENKNVVVADFGLARL  157 (310)
T ss_dssp             HTTEECSCCSTTSEEECTTSCEEECCCTTCEE
T ss_pred             hCCccCCCCCcCeEEECCCCCEEEeeccccee
Confidence                       899999999999999999853

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.67  E-value=4.2e-16  Score=103.69  Aligned_cols=82  Identities=12%  Similarity=0.066  Sum_probs=71.1

Q ss_pred             hhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           13 SSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      +.+.+|+.+|+++ .|+|+++++++++  ..+|+||||++ ++|.+.+...+ +++...   +++|++            
T Consensus       286 ~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~-~l~~~~---I~~QIl~AL~ylH~~GII  361 (569)
T 4azs_A          286 YELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGE-EIDREK---ILGSLLRSLAALEKQGFW  361 (569)
T ss_dssp             HHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTC-CCCHHH---HHHHHHHHHHHHHHTTCE
T ss_pred             HHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCC-CCCHHH---HHHHHHHHHHHHHHCCce
Confidence            4689999999999 7999999999999  89999999999 99999998765 377654   455655            


Q ss_pred             ------hcccccCCCeEEEeecCCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                            +||+++.+|.+||+|||+|...
T Consensus       362 HRDIKPeNILL~~dg~vKL~DFGlAr~~  389 (569)
T 4azs_A          362 HDDVRPWNVMVDARQHARLIDFGSIVTT  389 (569)
T ss_dssp             ESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred             eccCchHhEEECCCCCEEEeecccCeeC
Confidence                  9999999999999999998643

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.67  E-value=6.2e-16  Score=95.92  Aligned_cols=90  Identities=33%  Similarity=0.455  Sum_probs=78.0

Q ss_pred             CCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245            8 MEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      +.+....+.+|+.+++.++||||+++++++.  ...++++||+++++.+.+.....+++...+..++.|++         
T Consensus        59 ~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~  138 (311)
T 3niz_A           59 DEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH  138 (311)
T ss_dssp             --CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3444567889999999999999999999998  88999999999888888877665689999988888876         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               +||+++.++.+||+|||++..
T Consensus       139 ~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~  168 (311)
T 3niz_A          139 RILHRDLKPQNLLINSDGALKLADFGLARA  168 (311)
T ss_dssp             TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             CcccCCCchHhEEECCCCCEEEccCcCcee
Confidence                     899999999999999998853

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.67  E-value=1e-15  Score=93.93  Aligned_cols=92  Identities=29%  Similarity=0.345  Sum_probs=78.5

Q ss_pred             CCCCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------
Q 034245            6 NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus         6 ~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------   76 (100)
                      .........+.+|+.+++.++|||++++++++.  ...++++||+++++...+......++...+..++.|++       
T Consensus        39 ~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH  118 (292)
T 3o0g_A           39 DDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH  118 (292)
T ss_dssp             CSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            344445577889999999999999999999998  88999999999777777666555599999999988876       


Q ss_pred             -----------hcccccCCCeEEEeecCCCCC
Q 034245           77 -----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                 +||+++.++.+||+|||++..
T Consensus       119 ~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~  150 (292)
T 3o0g_A          119 SRNVLHRDLKPQNLLINRNGELKLANFGLARA  150 (292)
T ss_dssp             HTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             hCCeecCCCCHHHEEEcCCCCEEEeeccccee
Confidence                       899999999999999999853

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.66  E-value=7.7e-16  Score=97.64  Aligned_cols=81  Identities=14%  Similarity=0.225  Sum_probs=72.5

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+.+|+.+++.+ +||||+++++++.  +.+|+++||++ ++|.+.++    .+++..++.+++|++           
T Consensus        63 ~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH~~gI  138 (361)
T 4f9c_A           63 PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIHQFGI  138 (361)
T ss_dssp             HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            45688999999998 6999999999998  89999999999 99999984    388999999999976           


Q ss_pred             -------hcccccCC-CeEEEeecCCCC
Q 034245           77 -------RCCLLSFG-KTVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~-~~~ki~dfgl~~   96 (100)
                             +||+++.+ +.+||+|||+|.
T Consensus       139 iHRDiKPeNiLl~~~~~~~kl~DFGla~  166 (361)
T 4f9c_A          139 VHRDVKPSNFLYNRRLKKYALVDFGLAQ  166 (361)
T ss_dssp             ECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             EeCcCCHHHeEEeCCCCeEEECcCCCCc
Confidence                   89999866 899999999984

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.66  E-value=4.4e-16  Score=95.61  Aligned_cols=91  Identities=26%  Similarity=0.311  Sum_probs=77.9

Q ss_pred             CCCcchhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----
Q 034245            7 TMEEVPSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----   76 (100)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----   76 (100)
                      ........+.+|+.+++.++|||++++++++.    ...++++||++ ++|.+++......++...+..++.|++     
T Consensus        50 ~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~  129 (295)
T 3ugc_A           50 STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY  129 (295)
T ss_dssp             CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHH
Confidence            33444567889999999999999999999986    56899999998 999999987655588888888888866     


Q ss_pred             -------------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                   +||+++.++.+|++|||++..
T Consensus       130 lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~  163 (295)
T 3ugc_A          130 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKV  163 (295)
T ss_dssp             HHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred             HhcCCcccCCCCHhhEEEcCCCeEEEccCccccc
Confidence                         899999999999999999864

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.66  E-value=4.8e-16  Score=97.27  Aligned_cols=86  Identities=26%  Similarity=0.361  Sum_probs=76.5

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      .....+.+|+.+++.++||||+++++++.  ...++++||++ +++.+.+..... +++..+..++.|++          
T Consensus        56 ~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-l~~~~~~~~~~qi~~al~~lH~~~  134 (328)
T 3fe3_A           56 TSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR-MKEKEARSKFRQIVSAVQYCHQKR  134 (328)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34556889999999999999999999998  88999999998 999999876543 89999998888876          


Q ss_pred             --------hcccccCCCeEEEeecCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~   96 (100)
                              +||+++.++.+||+|||++.
T Consensus       135 ivHrDlkp~NIll~~~~~~kl~DFG~a~  162 (328)
T 3fe3_A          135 IVHRDLKAENLLLDADMNIKIADFGFSN  162 (328)
T ss_dssp             CCCSCCCGGGEEECTTSCEEECSTTCCG
T ss_pred             EeccCCCHHHEEEcCCCCEEEeeccCce
Confidence                    89999999999999999985

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.66  E-value=1.8e-15  Score=101.29  Aligned_cols=88  Identities=22%  Similarity=0.264  Sum_probs=79.2

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+.+.+|+.+++.++||||+++++++. ...++++||++ ++|.+++......+++..+..++.|++           
T Consensus       378 ~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i  457 (613)
T 2ozo_A          378 ADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF  457 (613)
T ss_dssp             TTHHHHHHHHHHHTTCCCTTBCCEEEEEESSSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeeEEEEeccCCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            34577999999999999999999999999 88999999999 999999977665689999998888876           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+||+|||++..
T Consensus       458 iHrDlkp~NILl~~~~~vkL~DFGla~~  485 (613)
T 2ozo_A          458 VHRNLAARNVLLVNRHYAKISDFGLSKA  485 (613)
T ss_dssp             CCSCCSGGGEEEEETTEEEECCCSTTTT
T ss_pred             EcCcCCHHHEEEcCCCcEEEeeccCccc
Confidence                   899999999999999999865

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.65  E-value=1.2e-15  Score=95.12  Aligned_cols=87  Identities=23%  Similarity=0.232  Sum_probs=77.7

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++||||+++++++.  ...++++||++ ++|.+++......++...+..++.|++           
T Consensus        93 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i  172 (325)
T 3kul_A           93 QRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY  172 (325)
T ss_dssp             HHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            3457899999999999999999999998  88999999999 899999977655689999988888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+||+|||++..
T Consensus       173 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~  200 (325)
T 3kul_A          173 VHRDLAARNVLVDSNLVCKVSDFGLSRV  200 (325)
T ss_dssp             ECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred             eCCCCCcceEEECCCCCEEECCCCcccc
Confidence                   899999999999999999854

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.64  E-value=1.2e-15  Score=93.51  Aligned_cols=88  Identities=32%  Similarity=0.414  Sum_probs=77.5

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      ......+.+|+.+++.++|||++++++.+.  ...++++|++++++.+.+.....+++...+..++.|++          
T Consensus        41 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  120 (288)
T 1ob3_A           41 EGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR  120 (288)
T ss_dssp             GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            344567889999999999999999999998  88999999999999998887655689999888888876          


Q ss_pred             --------hcccccCCCeEEEeecCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~   96 (100)
                              +||+++.++.+||+|||++.
T Consensus       121 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  148 (288)
T 1ob3_A          121 VLHRDLKPQNLLINREGELKIADFGLAR  148 (288)
T ss_dssp             CCCSCCCGGGEEECTTSCEEECCTTHHH
T ss_pred             eecCCCCHHHEEEcCCCCEEEeECcccc
Confidence                    89999999999999999864

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.64  E-value=2.3e-15  Score=91.33  Aligned_cols=87  Identities=23%  Similarity=0.412  Sum_probs=77.4

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ..+.+.+|+.++++++|||++++++.+.  ...++++||++ ++|.+++......++...+..++.|++           
T Consensus        48 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i  127 (269)
T 4hcu_A           48 SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV  127 (269)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            3567899999999999999999999998  88999999999 899999977665689999888888865           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+|++|||++..
T Consensus       128 ~H~dikp~Nil~~~~~~~kl~Dfg~~~~  155 (269)
T 4hcu_A          128 IHRDLAARNCLVGENQVIKVSDFGMTRF  155 (269)
T ss_dssp             CCSCCCGGGEEECGGGCEEECCTTGGGG
T ss_pred             ecCCcchheEEEcCCCCEEecccccccc
Confidence                   899999999999999998853

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.64  E-value=2.9e-15  Score=93.39  Aligned_cols=88  Identities=15%  Similarity=0.143  Sum_probs=77.3

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      .....+.+|+.+++.++||||+++++.+.  ...++++||++ ++|.+.+......+++..+..++.|++          
T Consensus        43 ~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~g  122 (321)
T 1tki_A           43 TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN  122 (321)
T ss_dssp             HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            33456889999999999999999999998  88999999999 899999987655589999999988876          


Q ss_pred             --------hcccccC--CCeEEEeecCCCCC
Q 034245           77 --------RCCLLSF--GKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~--~~~~ki~dfgl~~~   97 (100)
                              +||+++.  ++.+|++|||++..
T Consensus       123 ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~  153 (321)
T 1tki_A          123 IGHFDIRPENIIYQTRRSSTIKIIEFGQARQ  153 (321)
T ss_dssp             EECCCCCGGGEEESSSSCCCEEECCCTTCEE
T ss_pred             CCcCCCCHHHEEEccCCCCCEEEEECCCCeE
Confidence                    8999986  78999999999854

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.64  E-value=1.3e-15  Score=96.64  Aligned_cols=87  Identities=23%  Similarity=0.253  Sum_probs=74.0

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++||||+++++++.  ...++++||++ ++|.+++......+++..+..++.|++           
T Consensus        89 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  168 (373)
T 2qol_A           89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY  168 (373)
T ss_dssp             HHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            3457899999999999999999999998  88999999998 999999987665689998888888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+|++|||++..
T Consensus       169 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~  196 (373)
T 2qol_A          169 VHRDLAARNILINSNLVCKVSDFGLGRV  196 (373)
T ss_dssp             CCSCCCGGGEEECTTCCEEECCC-----
T ss_pred             eCCCCCcceEEEcCCCCEEECcCccccc
Confidence                   899999999999999999864

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.64  E-value=2.1e-15  Score=93.04  Aligned_cols=85  Identities=24%  Similarity=0.292  Sum_probs=75.6

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      ...+.+.+|+.+++.++||||+++++.+.  +..++++||++ ++|.+++....  ++...+..++.|++          
T Consensus        59 ~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~  136 (297)
T 3fxz_A           59 PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSNQ  136 (297)
T ss_dssp             SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCHHHHHhhcC--CCHHHHHHHHHHHHHHHHHHHhCC
Confidence            34567889999999999999999999988  88999999998 99999987653  88889888888866          


Q ss_pred             --------hcccccCCCeEEEeecCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~   96 (100)
                              +||+++.++.+||+|||++.
T Consensus       137 i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~  164 (297)
T 3fxz_A          137 VIHRDIKSDNILLGMDGSVKLTDFGFCA  164 (297)
T ss_dssp             EECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             ceeCCCCHHHEEECCCCCEEEeeCCCce
Confidence                    89999999999999999874

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.63  E-value=6.2e-16  Score=98.17  Aligned_cols=87  Identities=22%  Similarity=0.370  Sum_probs=76.6

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++||||+++++++.  ...++++||++ ++|.+++......++...+..++.|++           
T Consensus       155 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i  234 (377)
T 3cbl_A          155 LKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC  234 (377)
T ss_dssp             HHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            3457899999999999999999999998  78999999999 999999976554488888888888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+||+|||++..
T Consensus       235 vHrDlkp~Nil~~~~~~~kl~DfG~s~~  262 (377)
T 3cbl_A          235 IHRDLAARNCLVTEKNVLKISDFGMSRE  262 (377)
T ss_dssp             ECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred             CCcccCHHHEEEcCCCcEEECcCCCcee
Confidence                   899999999999999998753

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.63  E-value=2.5e-15  Score=98.44  Aligned_cols=90  Identities=20%  Similarity=0.352  Sum_probs=78.0

Q ss_pred             CCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH-------
Q 034245            8 MEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~-------   76 (100)
                      +......+.+|+.+++.++||||+++++++.  ...++++||++ ++|.+++.... ..++...+..++.|++       
T Consensus       256 ~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH  335 (495)
T 1opk_A          256 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE  335 (495)
T ss_dssp             SSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            3344678999999999999999999999998  88999999999 99999997643 3488888888888866       


Q ss_pred             -----------hcccccCCCeEEEeecCCCCC
Q 034245           77 -----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                 +||+++.++.+||+|||++..
T Consensus       336 ~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~  367 (495)
T 1opk_A          336 KKNFIHRNLAARNCLVGENHLVKVADFGLSRL  367 (495)
T ss_dssp             HTTEECSCCSGGGEEECGGGCEEECCTTCEEC
T ss_pred             hCCcccCCCChhhEEECCCCcEEEeeccccee
Confidence                       899999999999999999864

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.63  E-value=2.4e-15  Score=92.58  Aligned_cols=86  Identities=21%  Similarity=0.217  Sum_probs=76.6

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+..++.++|||++++++.+.  +..++++||++ ++|.+++.... +++...+..++.|++           
T Consensus        54 ~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i  132 (294)
T 4eqm_A           54 TLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAHDMRI  132 (294)
T ss_dssp             HHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            3467889999999999999999999998  88999999999 89999987654 489999988888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+|++|||++..
T Consensus       133 ~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~  160 (294)
T 4eqm_A          133 VHRDIKPQNILIDSNKTLKIFDFGIAKA  160 (294)
T ss_dssp             CCCCCCGGGEEECTTSCEEECCCSSSTT
T ss_pred             ccCCCCHHHEEECCCCCEEEEeCCCccc
Confidence                   899999999999999999864

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.63  E-value=3.5e-15  Score=96.66  Aligned_cols=84  Identities=19%  Similarity=0.262  Sum_probs=75.9

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ..+.+|..++..++||||+++++.+.  ..+|+++||++ |+|.+++......+++..+..++.|++             
T Consensus       119 ~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiH  198 (437)
T 4aw2_A          119 ACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH  198 (437)
T ss_dssp             CCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEe
Confidence            45889999999999999999999998  88999999999 999999987555599999999988866             


Q ss_pred             -----hcccccCCCeEEEeecCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~   96 (100)
                           +||+++.++.+||+|||++.
T Consensus       199 rDLKp~NILl~~~g~vkL~DFGla~  223 (437)
T 4aw2_A          199 RDIKPDNILMDMNGHIRLADFGSCL  223 (437)
T ss_dssp             CCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             cccCHHHeeEcCCCCEEEcchhhhh
Confidence                 89999999999999999884

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.62  E-value=1.7e-15  Score=101.84  Aligned_cols=87  Identities=17%  Similarity=0.275  Sum_probs=77.3

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      ......+.+|+.+++.++||||+++++++. ...++++||++ ++|.+++..... +++..+..++.|++          
T Consensus       411 ~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~-l~~~~~~~i~~qi~~~L~yLH~~~  489 (635)
T 4fl3_A          411 PALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRH-VKDKNIIELVHQVSMGMKYLEESN  489 (635)
T ss_dssp             GGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTEEHHHHHHHCTT-CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEEEccCCCCHHHHHhhCCC-CCHHHHHHHHHHHHHHHHHHHHCC
Confidence            344567999999999999999999999999 88999999999 999999976553 89999888888876          


Q ss_pred             --------hcccccCCCeEEEeecCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~   96 (100)
                              +||+++.++.+||+|||++.
T Consensus       490 iiHrDLkp~NILl~~~~~~kL~DFGla~  517 (635)
T 4fl3_A          490 FVHRDLAARNVLLVTQHYAKISDFGLSK  517 (635)
T ss_dssp             CCCSCCSGGGEEEEETTEEEECCTTHHH
T ss_pred             EeCCCCChHhEEEeCCCCEEEEEcCCcc
Confidence                    89999999999999999874

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.62  E-value=4.5e-15  Score=90.57  Aligned_cols=87  Identities=23%  Similarity=0.345  Sum_probs=77.3

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++|||++++++.+.  ...++++||++ ++|.+++......++...+..++.|++           
T Consensus        62 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  141 (283)
T 3gen_A           62 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF  141 (283)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            3467899999999999999999999998  88999999998 999999987544589999988888876           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+|++|||++..
T Consensus       142 ~H~dikp~Nili~~~~~~kl~Dfg~~~~  169 (283)
T 3gen_A          142 LHRDLAARNCLVNDQGVVKVSDFGLSRY  169 (283)
T ss_dssp             CCSSCSGGGEEECTTSCEEECSTTGGGG
T ss_pred             cCCCCccceEEEcCCCCEEEcccccccc
Confidence                   899999999999999998853

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.62  E-value=3.4e-15  Score=90.48  Aligned_cols=86  Identities=22%  Similarity=0.337  Sum_probs=76.7

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+..++.++|||++++++.+.  ...++++|+++ ++|.+++......+++..+..++.|++           
T Consensus        46 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  125 (268)
T 3sxs_A           46 SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQF  125 (268)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            3467899999999999999999999998  78999999999 999999877554589999988888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~   96 (100)
                             +||+++.++.+|++|||++.
T Consensus       126 ~H~dikp~Nil~~~~~~~~l~Dfg~~~  152 (268)
T 3sxs_A          126 IHRDLAARNCLVDRDLCVKVSDFGMTR  152 (268)
T ss_dssp             EESSCSGGGEEECTTCCEEECCTTCEE
T ss_pred             ecCCcCcceEEECCCCCEEEccCccce
Confidence                   89999999999999999875

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.61  E-value=3.3e-15  Score=96.78  Aligned_cols=87  Identities=25%  Similarity=0.362  Sum_probs=76.5

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee-------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS-------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~-------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------   76 (100)
                      ....+.+|+.+++.++||||+++++++.       ..+|+++|++.++|.+.+.... .+++..+..++.|++       
T Consensus        95 ~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH  173 (458)
T 3rp9_A           95 DCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYVH  173 (458)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCCSEEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEeccccchhhhcccCC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            3457889999999999999999999984       5689999998899999988764 389999999988876       


Q ss_pred             -----------hcccccCCCeEEEeecCCCCCC
Q 034245           77 -----------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 -----------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                                 +||+++.++.+||+|||++...
T Consensus       174 ~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~  206 (458)
T 3rp9_A          174 SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV  206 (458)
T ss_dssp             HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred             hCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence                       8999999999999999998653

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.61  E-value=3.9e-15  Score=91.01  Aligned_cols=90  Identities=17%  Similarity=0.101  Sum_probs=77.7

Q ss_pred             CCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH--------
Q 034245            8 MEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~--------   76 (100)
                      .....+.+.+|+.+++.++|||++++++.+.  +..++++||++ ++|.+++......++...+..++.|++        
T Consensus        52 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~  131 (289)
T 4fvq_A           52 HRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEE  131 (289)
T ss_dssp             GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            3444567899999999999999999999998  78899999999 999999987655588888888888866        


Q ss_pred             ----------hcccccCCCe--------EEEeecCCCCC
Q 034245           77 ----------RCCLLSFGKT--------VKVADLQALDW   97 (100)
Q Consensus        77 ----------~nil~~~~~~--------~ki~dfgl~~~   97 (100)
                                +||+++.++.        +|++|||++..
T Consensus       132 ~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~  170 (289)
T 4fvq_A          132 NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISIT  170 (289)
T ss_dssp             TTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTT
T ss_pred             CCeECCCcCcceEEEecCCcccccccceeeeccCccccc
Confidence                      8999987776        99999999854

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.61  E-value=2.9e-15  Score=91.49  Aligned_cols=87  Identities=23%  Similarity=0.369  Sum_probs=72.3

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ..+.+.+|+..++.++|||++++++++. +..++++||++ ++|.+++.....+++...+..++.|++            
T Consensus        59 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~  138 (281)
T 1mp8_A           59 VREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFV  138 (281)
T ss_dssp             HHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHhCCCCccceEEEEEccCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            3456889999999999999999999988 88999999999 899999987655588888888888866            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +||+++.++.+|++|||++..
T Consensus       139 H~dlkp~Nil~~~~~~~kl~Dfg~~~~  165 (281)
T 1mp8_A          139 HRDIAARNVLVSSNDCVKLGDFGLSRY  165 (281)
T ss_dssp             CSCCSGGGEEEEETTEEEECC------
T ss_pred             cccccHHHEEECCCCCEEECccccccc
Confidence                  899999999999999998854

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.61  E-value=4.1e-15  Score=91.19  Aligned_cols=90  Identities=17%  Similarity=0.152  Sum_probs=73.4

Q ss_pred             CCcchhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245            8 MEEVPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      .....+.+.+|+.+++.++|||++++++... ...++++||++ ++|.+.+......++...+..++.|++         
T Consensus        60 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~  139 (289)
T 3og7_A           60 TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK  139 (289)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            3344567899999999999999999999776 88999999999 999999976665689998888888866         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               +||+++.++.+|++|||++..
T Consensus       140 ~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~  169 (289)
T 3og7_A          140 SIIHRDLKSNNIFLHEDNTVKIGDFGLATE  169 (289)
T ss_dssp             TCCCSCCCGGGEEEETTTEEEECCCC----
T ss_pred             CcccccCccceEEECCCCCEEEccceeccc
Confidence                     899999999999999998853

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.61  E-value=5.7e-15  Score=93.02  Aligned_cols=86  Identities=27%  Similarity=0.290  Sum_probs=75.5

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  ...++++||+.|++.+.+.....++++..+..++.|++             
T Consensus        98 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH  177 (348)
T 1u5q_A           98 WQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIH  177 (348)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence            356889999999999999999999998  88999999999888888765445589999888888866             


Q ss_pred             -----hcccccCCCeEEEeecCCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~~   97 (100)
                           +||+++.++.+||+|||++..
T Consensus       178 ~Dlkp~NIll~~~~~~kL~DfG~a~~  203 (348)
T 1u5q_A          178 RDVKAGNILLSEPGLVKLGDFGSASI  203 (348)
T ss_dssp             CCCSGGGEEEETTTEEEECCCTTCBS
T ss_pred             CCCCHHHEEECCCCCEEEeeccCcee
Confidence                 899999999999999999864

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.61  E-value=7.4e-15  Score=93.78  Aligned_cols=85  Identities=16%  Similarity=0.294  Sum_probs=76.3

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++||||+++++.+.  ...++++||+. ++|...+..... ++...+..++.|++            
T Consensus        59 ~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~-l~~~~~~~~~~qi~~aL~~LH~~giv  137 (384)
T 4fr4_A           59 VRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH-FKEETVKLFICELVMALDYLQNQRII  137 (384)
T ss_dssp             HHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHTTCC-CCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCce
Confidence            456889999999999999999999998  88999999999 999999987543 89999998888866            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +||+++.++.+||+|||++..
T Consensus       138 HrDlkp~NIll~~~g~vkL~DFG~a~~  164 (384)
T 4fr4_A          138 HRDMKPDNILLDEHGHVHITDFNIAAM  164 (384)
T ss_dssp             CCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             eccCcHHHeEECCCCCEEEeccceeee
Confidence                  899999999999999999854

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.61  E-value=5.1e-15  Score=93.01  Aligned_cols=85  Identities=26%  Similarity=0.303  Sum_probs=75.6

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ...+.+|+.+++.++||||+++++++.  ...++++||+.|++.+.+..... +++..+..++.|++             
T Consensus        53 ~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~g~l~~~l~~~~~-l~~~~~~~i~~qi~~aL~~LH~~givH  131 (336)
T 3h4j_B           53 HMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKR-MTEDEGRRFFQQIICAIEYCHRHKIVH  131 (336)
T ss_dssp             SHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCEEHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence            356889999999999999999999998  88999999999889888866543 89999999988876             


Q ss_pred             -----hcccccCCCeEEEeecCCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~~   97 (100)
                           +||+++.++.+||+|||++..
T Consensus       132 ~Dlkp~NIll~~~~~~kl~DFG~s~~  157 (336)
T 3h4j_B          132 RDLKPENLLLDDNLNVKIADFGLSNI  157 (336)
T ss_dssp             CCCSTTTEEECTTCCEEECCSSCTBT
T ss_pred             cCCchhhEEEcCCCCEEEEEecccee
Confidence                 899999999999999999864

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.61  E-value=7.7e-15  Score=92.84  Aligned_cols=86  Identities=21%  Similarity=0.141  Sum_probs=74.4

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++||||+++++.+.  ...++++||++ ++|.+.+.... .+++..+..++.|++           
T Consensus        71 ~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~~i  149 (362)
T 2bdw_A           71 DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSNGI  149 (362)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            3456889999999999999999999998  88999999999 89999887654 389999988888876           


Q ss_pred             -------hcccccCC---CeEEEeecCCCCC
Q 034245           77 -------RCCLLSFG---KTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~---~~~ki~dfgl~~~   97 (100)
                             +||+++.+   +.+||+|||++..
T Consensus       150 vH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~  180 (362)
T 2bdw_A          150 VHRNLKPENLLLASKAKGAAVKLADFGLAIE  180 (362)
T ss_dssp             BCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred             EeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence                   89999754   4699999999864

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.60  E-value=1.2e-14  Score=90.57  Aligned_cols=88  Identities=16%  Similarity=0.238  Sum_probs=76.6

Q ss_pred             CCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH--------
Q 034245            8 MEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~--------   76 (100)
                      .....+.+.+|+..++.++|||++++++.+.  ...++++||++ ++|.+++...  .+++..+..++.|++        
T Consensus        82 ~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH~  159 (321)
T 2c30_A           82 KQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLHA  159 (321)
T ss_dssp             TCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHH
Confidence            3444567889999999999999999999998  88999999999 9999988754  389999888888866        


Q ss_pred             ----------hcccccCCCeEEEeecCCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                +||+++.++.+|++|||++..
T Consensus       160 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~  190 (321)
T 2c30_A          160 QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQ  190 (321)
T ss_dssp             TTEECCCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             CCeecCCCCHHHEEECCCCcEEEeeeeeeee
Confidence                      899999999999999998753

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.60  E-value=5.5e-15  Score=93.70  Aligned_cols=85  Identities=21%  Similarity=0.312  Sum_probs=74.3

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC---------------CCCCHHHHHHHH
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK---------------DSMDGYSIKFSS   72 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~---------------~~~~~~~~~~~~   72 (100)
                      ...+.+|+.+++.+ +||||+++++.+.  +.+|+++||++ ++|.+++....               ..++...+..++
T Consensus       130 ~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  209 (370)
T 2psq_A          130 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT  209 (370)
T ss_dssp             HHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHH
Confidence            45688999999999 8999999999998  88999999999 89999987643               236788888888


Q ss_pred             HHhH------------------hcccccCCCeEEEeecCCCC
Q 034245           73 SDSL------------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        73 ~~~~------------------~nil~~~~~~~ki~dfgl~~   96 (100)
                      .|++                  +||+++.++.+||+|||++.
T Consensus       210 ~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~  251 (370)
T 2psq_A          210 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR  251 (370)
T ss_dssp             HHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCSSCE
T ss_pred             HHHHHHHHHHHhCCeeccccchhhEEECCCCCEEEccccCCc
Confidence            7866                  89999999999999999985

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.60  E-value=1.4e-14  Score=91.74  Aligned_cols=85  Identities=26%  Similarity=0.249  Sum_probs=75.4

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      .+.+.+|+.+++.++||||+++++.+.  ...++++||++ ++|.+++.... .+++..+..++.|++            
T Consensus        59 ~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~giv  137 (361)
T 2yab_A           59 REEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLHTKKIA  137 (361)
T ss_dssp             HHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTCS-CCBHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            467899999999999999999999998  88999999998 99999997654 489999999988876            


Q ss_pred             ------hcccccCCC----eEEEeecCCCCC
Q 034245           77 ------RCCLLSFGK----TVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~----~~ki~dfgl~~~   97 (100)
                            +||++..++    .+||+|||++..
T Consensus       138 HrDlkp~NIll~~~~~~~~~vkl~DFG~a~~  168 (361)
T 2yab_A          138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHE  168 (361)
T ss_dssp             CCCCSGGGEEESCTTSSSCCEEECCCSSCEE
T ss_pred             cCCCCHHHEEEeCCCCCccCEEEEecCCceE
Confidence                  899998766    799999999853

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.60  E-value=7.5e-15  Score=92.24  Aligned_cols=86  Identities=17%  Similarity=0.314  Sum_probs=76.0

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++|||++++++.+.  ..+++++||++ ++|...+.... .+++..+..++.|++           
T Consensus        48 ~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~i  126 (337)
T 1o6l_A           48 EVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDV  126 (337)
T ss_dssp             CHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            3456889999999999999999999998  88999999999 89999887654 389999888888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+||+|||++..
T Consensus       127 vHrDlkp~NIll~~~g~vkL~DFG~a~~  154 (337)
T 1o6l_A          127 VYRDIKLENLMLDKDGHIKITDFGLCKE  154 (337)
T ss_dssp             BCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             ecCcCCHHHEEECCCCCEEEeeccchhh
Confidence                   899999999999999999864

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.60  E-value=8.3e-15  Score=91.34  Aligned_cols=85  Identities=21%  Similarity=0.291  Sum_probs=75.6

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      .+.+.+|..+++.++||||+++++.+.  ...|+++||++ ++|.+++..... ++...+..++.|++            
T Consensus        50 ~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~~iv  128 (318)
T 1fot_A           50 VEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQR-FPNPVAKFYAAEVCLALEYLHSKDII  128 (318)
T ss_dssp             HHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSS-CCHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred             HHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            456778999999999999999999998  88999999999 899999987653 89999888888866            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +||+++.++.+||+|||++..
T Consensus       129 HrDlkp~NIll~~~g~~kL~Dfg~a~~  155 (318)
T 1fot_A          129 YRDLKPENILLDKNGHIKITDFGFAKY  155 (318)
T ss_dssp             CCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred             ccCCChheEEEcCCCCEEEeecCccee
Confidence                  899999999999999999853

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.60  E-value=4.6e-15  Score=92.47  Aligned_cols=87  Identities=15%  Similarity=0.212  Sum_probs=77.3

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      .....+.+|+.+++.++|||++++++++. ...++++++++ ++|.+.+......++...+..++.|++           
T Consensus        59 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i  138 (327)
T 3poz_A           59 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL  138 (327)
T ss_dssp             -CHHHHHHHHHHHHHCCBTTBCCEEEEEESSSEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCe
Confidence            44567999999999999999999999999 77899999999 999999987665689999888888876           


Q ss_pred             -------hcccccCCCeEEEeecCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~   96 (100)
                             +||+++.++.+||+|||++.
T Consensus       139 vH~Dikp~NIll~~~~~~kl~Dfg~a~  165 (327)
T 3poz_A          139 VHRDLAARNVLVKTPQHVKITDFGLAK  165 (327)
T ss_dssp             CCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred             eCCCCChheEEECCCCCEEEccCccee
Confidence                   89999999999999999874

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.60  E-value=1e-14  Score=95.36  Aligned_cols=85  Identities=24%  Similarity=0.314  Sum_probs=76.4

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++||||+++++++.  ...++++||++ ++|.+++.... .+++..+..++.|++            
T Consensus        60 ~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~giv  138 (476)
T 2y94_A           60 VGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCHRHMVV  138 (476)
T ss_dssp             HHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSSEEHHHHTTSSS-SCCHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred             HHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCC
Confidence            456889999999999999999999998  88999999998 99999997654 389999999988876            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +||+++.++.+||+|||++..
T Consensus       139 HrDLkp~NIll~~~~~vkL~DFG~a~~  165 (476)
T 2y94_A          139 HRDLKPENVLLDAHMNAKIADFGLSNM  165 (476)
T ss_dssp             CSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred             cccccHHHEEEecCCCeEEEeccchhh
Confidence                  899999999999999999854

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.60  E-value=3.5e-15  Score=94.78  Aligned_cols=88  Identities=22%  Similarity=0.240  Sum_probs=73.1

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee---ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS---QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~---~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      .....+.+|+.+++.++|||++++++++.   +..++++||++ ++|.+++......++...+..++.|++         
T Consensus       132 ~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~  211 (373)
T 3c1x_A          132 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK  211 (373)
T ss_dssp             HHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            34567899999999999999999999875   67899999999 899999987665588888888887766         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               +||+++.++.+||+|||++..
T Consensus       212 ~ivHrDlkp~NIll~~~~~~kL~DFG~a~~  241 (373)
T 3c1x_A          212 KFVHRDLAARNCMLDEKFTVKVADFGLARD  241 (373)
T ss_dssp             TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred             CEecCccchheEEECCCCCEEEeecccccc
Confidence                     899999999999999999853

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.60  E-value=6.8e-15  Score=93.52  Aligned_cols=88  Identities=20%  Similarity=0.231  Sum_probs=76.5

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH--------
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~--------   76 (100)
                      .+....+.+|+.+++.++||||+++++++.  +..++++||++ ++|.+++.... ..+++..+..++.|++        
T Consensus        67 ~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~  146 (389)
T 3gni_B           67 NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH  146 (389)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            344567888999999999999999999998  88999999999 99999987642 3489999998888876        


Q ss_pred             ----------hcccccCCCeEEEeecCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~   96 (100)
                                +||+++.++.+|++|||.+.
T Consensus       147 ~~ivHrDlkp~NIll~~~~~~kl~dfg~~~  176 (389)
T 3gni_B          147 MGYVHRSVKASHILISVDGKVYLSGLRSNL  176 (389)
T ss_dssp             TTEECCCCSGGGEEECTTCCEEECCGGGCE
T ss_pred             CCeecCCCCHHHEEEcCCCCEEEcccccce
Confidence                      89999999999999999763

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.60  E-value=3.6e-15  Score=96.72  Aligned_cols=88  Identities=19%  Similarity=0.209  Sum_probs=76.6

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~----------   76 (100)
                      ...+.+.+|+.+++.++|||++++++++. ...++++||++ ++|.+++.... ..++...+..++.|++          
T Consensus       225 ~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  304 (454)
T 1qcf_A          225 MSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN  304 (454)
T ss_dssp             BCHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccHHHHHHHHHHHhhCCCCCEeeEEEEEeCCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            34678999999999999999999999988 88999999999 99999997542 2378888888887766          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +||+++.++.+||+|||++..
T Consensus       305 ivHrDlkp~Nill~~~~~~kl~DFG~a~~  333 (454)
T 1qcf_A          305 YIHRDLRAANILVSASLVCKIADFGLARV  333 (454)
T ss_dssp             CCCSSCSGGGEEECTTCCEEECSTTGGGG
T ss_pred             ccCCCCCHHHEEECCCCcEEEeeCCCceE
Confidence                    899999999999999999864

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.60  E-value=5.5e-15  Score=95.86  Aligned_cols=85  Identities=24%  Similarity=0.199  Sum_probs=75.1

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++||||+++++.+.  +..++++||++ ++|.+.+..... +++..+..++.|++            
T Consensus        54 ~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~-~~e~~~~~i~~qil~aL~~lH~~giv  132 (444)
T 3soa_A           54 HQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY-YSEADASHCIQQILEAVLHCHQMGVV  132 (444)
T ss_dssp             HHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCCBHHHHHHHCSC-CCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred             HHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            456889999999999999999999998  88999999999 899999877654 89999999988876            


Q ss_pred             ------hccccc---CCCeEEEeecCCCCC
Q 034245           77 ------RCCLLS---FGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~---~~~~~ki~dfgl~~~   97 (100)
                            +||+++   .++.+||+|||++..
T Consensus       133 HrDlKp~NIll~~~~~~~~vkL~DFG~a~~  162 (444)
T 3soa_A          133 HRNLKPENLLLASKLKGAAVKLADFGLAIE  162 (444)
T ss_dssp             CCCCSSTTEEESBSSTTCCEEECCCSSCBC
T ss_pred             ccCCCHHHEEEeccCCCCcEEEccCceeEE
Confidence                  899998   457899999999854

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.60  E-value=8.2e-15  Score=91.37  Aligned_cols=84  Identities=20%  Similarity=0.221  Sum_probs=74.6

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      .+.+.+|+.+++.++||||+++++.+.  ...++++||++ ++|.+.+..... +++..+..++.|++            
T Consensus        49 ~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~aL~~LH~~giv  127 (323)
T 3tki_A           49 PENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGIT  127 (323)
T ss_dssp             --CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGSBTTTB-CCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCcHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            456889999999999999999999998  88899999999 899999876643 89999999988876            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +||+++.++.+||+|||++.
T Consensus       128 H~Dlkp~NIll~~~~~~kl~Dfg~a~  153 (323)
T 3tki_A          128 HRDIKPENLLLDERDNLKISDFGLAT  153 (323)
T ss_dssp             CSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             ccccchHHEEEeCCCCEEEEEeeccc
Confidence                  89999999999999999985

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.60  E-value=9.4e-15  Score=92.16  Aligned_cols=86  Identities=16%  Similarity=0.243  Sum_probs=76.4

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++|||++++++.+.  ..+|+++||++ ++|.+.+..... ++...+..++.|++           
T Consensus        84 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~~i  162 (350)
T 1rdq_E           84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYLHSLDL  162 (350)
T ss_dssp             CHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            3456889999999999999999999998  88999999998 999999987543 89999998888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+||+|||++..
T Consensus       163 vHrDlkp~NIll~~~g~~kL~DFg~a~~  190 (350)
T 1rdq_E          163 IYRDLKPENLLIDQQGYIQVTDFGFAKR  190 (350)
T ss_dssp             ECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             ccccCccceEEECCCCCEEEccccccee
Confidence                   899999999999999999853

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.60  E-value=9.9e-15  Score=89.61  Aligned_cols=87  Identities=22%  Similarity=0.246  Sum_probs=76.3

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee---ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS---QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~---~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      ....+.+|+.+++.++|||++++++++.   +..++++||++ ++|.+++......++...+..++.|++          
T Consensus        69 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~  148 (298)
T 3f66_A           69 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK  148 (298)
T ss_dssp             HHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3456889999999999999999999865   67899999999 899999987665588888888887765          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +||+++.++.+|++|||++..
T Consensus       149 i~H~dikp~Nil~~~~~~~kl~Dfg~a~~  177 (298)
T 3f66_A          149 FVHRDLAARNCMLDEKFTVKVADFGLARD  177 (298)
T ss_dssp             CCCSCCSGGGEEECTTCCEEECSCGGGCC
T ss_pred             ccCCCCchheEEECCCCCEEECccccccc
Confidence                    899999999999999999864

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.59  E-value=4.2e-15  Score=94.41  Aligned_cols=87  Identities=17%  Similarity=0.203  Sum_probs=75.0

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ..+.+.+|+.+++.++||||+++++.+.  ...++++||++ ++|.+.+......+++..+..++.|++           
T Consensus       129 ~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i  208 (373)
T 2x4f_A          129 DKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYI  208 (373)
T ss_dssp             HHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             cHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            4567889999999999999999999998  88999999999 899988876554588888888888866           


Q ss_pred             -------hcccc--cCCCeEEEeecCCCCC
Q 034245           77 -------RCCLL--SFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~--~~~~~~ki~dfgl~~~   97 (100)
                             +||++  ..++.+||+|||++..
T Consensus       209 vH~Dlkp~NIll~~~~~~~~kl~DFG~a~~  238 (373)
T 2x4f_A          209 LHLDLKPENILCVNRDAKQIKIIDFGLARR  238 (373)
T ss_dssp             ECCCCCGGGEEEEETTTTEEEECCCSSCEE
T ss_pred             ccccCCHHHEEEecCCCCcEEEEeCCCcee
Confidence                   89998  4678999999999853

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.59  E-value=7.8e-15  Score=94.35  Aligned_cols=83  Identities=19%  Similarity=0.268  Sum_probs=74.2

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++||||+++++.+.  ..+|+++||++ |+|.+++...  .+++..+..++.|++            
T Consensus       113 ~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH~~giv  190 (410)
T 3v8s_A          113 SAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMGFI  190 (410)
T ss_dssp             CSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence            345789999999999999999999998  88999999998 9999998764  388999888888866            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +||+++.++.+||+|||++.
T Consensus       191 HrDLKp~NILl~~~g~ikL~DFG~a~  216 (410)
T 3v8s_A          191 HRDVKPDNMLLDKSGHLKLADFGTCM  216 (410)
T ss_dssp             CCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             eccCCHHHeeECCCCCEEEeccceeE
Confidence                  89999999999999999984

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.59  E-value=1.3e-14  Score=94.12  Aligned_cols=86  Identities=28%  Similarity=0.383  Sum_probs=75.2

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee---ccEEEEEeccc-ccHHHHhccCCCC-CCHHHHHHHHHHhH---------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS---QGLCLFLEYQA-NDLAYLLKYPKDS-MDGYSIKFSSSDSL---------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~---~~~~lv~e~~~-~~l~~~l~~~~~~-~~~~~~~~~~~~~~---------   76 (100)
                      ..+.+.+|+.++++++|||++++++++.   ...++++||++ ++|.+++...... ++...+..++.|++         
T Consensus       229 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~  308 (450)
T 1k9a_A          229 TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN  308 (450)
T ss_dssp             TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            4567999999999999999999999987   47999999999 9999999865432 68888888888866         


Q ss_pred             ---------hcccccCCCeEEEeecCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~   96 (100)
                               +||+++.++.+||+|||++.
T Consensus       309 ~ivHrDlkp~Nill~~~~~~kl~DfG~a~  337 (450)
T 1k9a_A          309 NFVHRDLAARNVLVSEDNVAKVSDFGLTK  337 (450)
T ss_dssp             TEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             CeeCCCCCHhhEEECCCCCEEEeeCCCcc
Confidence                     89999999999999999975

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.59  E-value=2.2e-14  Score=89.46  Aligned_cols=85  Identities=27%  Similarity=0.277  Sum_probs=75.3

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++++++.  ...++++||++ ++|.+++.... .+++..+..++.|++            
T Consensus        58 ~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~~iv  136 (326)
T 2y0a_A           58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSLQIA  136 (326)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTSS-CCBHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEcCCCCCHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence            467889999999999999999999998  88999999998 99999997654 489999998988876            


Q ss_pred             ------hcccccCCC----eEEEeecCCCCC
Q 034245           77 ------RCCLLSFGK----TVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~----~~ki~dfgl~~~   97 (100)
                            +||++..++    .+||+|||++..
T Consensus       137 H~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~  167 (326)
T 2y0a_A          137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHK  167 (326)
T ss_dssp             CCCCCGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             cCCCCHHHEEEecCCCCCCCEEEEECCCCeE
Confidence                  899998776    899999999854

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.59  E-value=9.7e-15  Score=91.26  Aligned_cols=87  Identities=21%  Similarity=0.221  Sum_probs=75.3

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++|||++++++.+.  ...++++|+++ ++|.+++......++...+..++.|++           
T Consensus        89 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  168 (333)
T 1mqb_A           89 QRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY  168 (333)
T ss_dssp             HHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            3456889999999999999999999998  88999999999 899999987655589999888888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+|++|||++..
T Consensus       169 vH~Dikp~NIl~~~~~~~kl~Dfg~~~~  196 (333)
T 1mqb_A          169 VHRDLAARNILVNSNLVCKVSDFGLSRV  196 (333)
T ss_dssp             CCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred             eCCCCChheEEECCCCcEEECCCCcchh
Confidence                   899999999999999999864

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.59  E-value=1.1e-14  Score=92.94  Aligned_cols=86  Identities=17%  Similarity=0.211  Sum_probs=75.5

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++||||+++++.+.  ...++++||++ ++|.+.+......+++..+..++.|++            
T Consensus        92 ~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~giv  171 (387)
T 1kob_A           92 KYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIV  171 (387)
T ss_dssp             HHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            456889999999999999999999998  88999999999 999999987655589999999988876            


Q ss_pred             ------hcccccC--CCeEEEeecCCCCC
Q 034245           77 ------RCCLLSF--GKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~--~~~~ki~dfgl~~~   97 (100)
                            +||+++.  .+.+||+|||++..
T Consensus       172 HrDlkp~NIll~~~~~~~vkL~DFG~a~~  200 (387)
T 1kob_A          172 HLDIKPENIMCETKKASSVKIIDFGLATK  200 (387)
T ss_dssp             CCCCCGGGEEESSTTCCCEEECCCTTCEE
T ss_pred             ecccchHHeEEecCCCCceEEEeccccee
Confidence                  8999974  47899999999864

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.59  E-value=1e-14  Score=88.14  Aligned_cols=87  Identities=23%  Similarity=0.399  Sum_probs=77.1

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ..+.+.+|+..++.++|||++++++.+.  +..++++|+++ ++|.+++......++...+..++.|++           
T Consensus        46 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  125 (267)
T 3t9t_A           46 SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV  125 (267)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            3467899999999999999999999998  88999999999 899999987655588888888888865           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+|++|||++..
T Consensus       126 ~H~dl~p~Nili~~~~~~kl~dfg~~~~  153 (267)
T 3t9t_A          126 IHRDLAARNCLVGENQVIKVSDFGMTRF  153 (267)
T ss_dssp             CCSSCCGGGEEECGGGCEEECCTTGGGG
T ss_pred             ccCCCchheEEECCCCCEEEcccccccc
Confidence                   899999999999999998753

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.59  E-value=9.4e-15  Score=90.93  Aligned_cols=91  Identities=26%  Similarity=0.311  Sum_probs=77.8

Q ss_pred             CCCcchhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----
Q 034245            7 TMEEVPSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----   76 (100)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----   76 (100)
                      ........+.+|+.+++.++|||++++.+.+.    ...++++|+++ ++|.+++......++...+..++.|++     
T Consensus        81 ~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~  160 (326)
T 2w1i_A           81 STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY  160 (326)
T ss_dssp             CCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHH
Confidence            34444567899999999999999999999887    37899999999 899999987655588888888888866     


Q ss_pred             -------------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                   +||+++.++.+|++|||++..
T Consensus       161 LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~  194 (326)
T 2w1i_A          161 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKV  194 (326)
T ss_dssp             HHHTTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred             HHhCCEeccCCCcceEEEcCCCcEEEecCcchhh
Confidence                         899999999999999998854

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.59  E-value=5.8e-15  Score=95.74  Aligned_cols=87  Identities=21%  Similarity=0.264  Sum_probs=75.9

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~-----------   76 (100)
                      ..+.+.+|+.+++.++|||++++++++. ...++++||++ ++|.+++.... ..++...+..++.|++           
T Consensus       222 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i  301 (452)
T 1fmk_A          222 SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY  301 (452)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CHHHHHHHHHHHHhCCCCCEeeEEEEEcCCceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            4567999999999999999999999988 88999999999 99999997532 2388888888888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+||+|||++..
T Consensus       302 vHrDlkp~Nill~~~~~~kl~DfG~a~~  329 (452)
T 1fmk_A          302 VHRDLRAANILVGENLVCKVADFGLARL  329 (452)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCCCTTC-
T ss_pred             eCCCCChhhEEECCCCCEEECCCcccee
Confidence                   899999999999999999864

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.59  E-value=1.1e-14  Score=92.62  Aligned_cols=87  Identities=21%  Similarity=0.293  Sum_probs=76.2

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC---------------CCCCHHHHHHHH
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK---------------DSMDGYSIKFSS   72 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~---------------~~~~~~~~~~~~   72 (100)
                      ...+.+|+.+++.+ +||||+++++.+.  +..++++||++ ++|.+++....               ..+++..+..++
T Consensus       118 ~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  197 (382)
T 3tt0_A          118 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCA  197 (382)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHH
Confidence            45688999999999 9999999999998  88999999999 89999987643               238899998888


Q ss_pred             HHhH------------------hcccccCCCeEEEeecCCCCCC
Q 034245           73 SDSL------------------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        73 ~~~~------------------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                      .|++                  +||+++.++.+||+|||++...
T Consensus       198 ~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~  241 (382)
T 3tt0_A          198 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI  241 (382)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSCCCCS
T ss_pred             HHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccCccccc
Confidence            8876                  8999999999999999998643

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.59  E-value=8.2e-15  Score=94.30  Aligned_cols=85  Identities=21%  Similarity=0.221  Sum_probs=75.5

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|..++..++||||+++++.+.  ..+|+++||++ ++|..++...+..+++..+..++.|++            
T Consensus       105 ~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~gii  184 (412)
T 2vd5_A          105 VSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYV  184 (412)
T ss_dssp             GCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            345788999999999999999999998  88999999998 999999976544589999888888865            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +||+++.++.+||+|||++.
T Consensus       185 HrDLKp~NILld~~g~vkL~DFGla~  210 (412)
T 2vd5_A          185 HRDIKPDNILLDRCGHIRLADFGSCL  210 (412)
T ss_dssp             CCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             ecccCHHHeeecCCCCEEEeechhhe
Confidence                  89999999999999999984

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.59  E-value=4.9e-15  Score=92.18  Aligned_cols=91  Identities=24%  Similarity=0.261  Sum_probs=77.4

Q ss_pred             CCCcchhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----
Q 034245            7 TMEEVPSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----   76 (100)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----   76 (100)
                      ........+.+|+.+++.++|||++++++++.    ...++++||++ ++|.+++......++...+..++.|++     
T Consensus        63 ~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~  142 (327)
T 3lxl_A           63 SGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY  142 (327)
T ss_dssp             CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHH
Confidence            33344566899999999999999999999875    66899999998 999999876544589999988888866     


Q ss_pred             -------------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                   +||+++.++.+|++|||++..
T Consensus       143 lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~  176 (327)
T 3lxl_A          143 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKL  176 (327)
T ss_dssp             HHHTTEECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred             HHhCCccCCCCChhhEEECCCCCEEEccccccee
Confidence                         899999999999999998853

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.59  E-value=1.6e-14  Score=88.43  Aligned_cols=87  Identities=22%  Similarity=0.267  Sum_probs=77.5

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ..+.+.+|+.+++.++|||++++++.+. ...++++|+++ ++|.+++......++...+..++.|++            
T Consensus        53 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~  132 (287)
T 1u59_A           53 DTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFV  132 (287)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHHhCCCCCEeEEEEEecCCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence            4567889999999999999999999999 88999999999 899999976655689999988888876            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +||+++.++.+|++|||++..
T Consensus       133 H~dlkp~Nili~~~~~~kl~Dfg~~~~  159 (287)
T 1u59_A          133 HRDLAARNVLLVNRHYAKISDFGLSKA  159 (287)
T ss_dssp             CCCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             eCCCchheEEEcCCCCEEECcccceee
Confidence                  899999999999999998853

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.59  E-value=5.9e-15  Score=97.47  Aligned_cols=88  Identities=20%  Similarity=0.252  Sum_probs=76.9

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~-----------   76 (100)
                      ..+.+.+|+.+++.++||||+++++++. ...++++||+. ++|.+++.... ..++...+..++.|++           
T Consensus       305 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i  384 (535)
T 2h8h_A          305 SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY  384 (535)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CHHHHHHHHHHHHhCCCCCEeeEEEEEeeccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            3567999999999999999999999988 88999999999 89999997532 2388888888888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                             +||+++.++.+||+|||++...
T Consensus       385 vHrDlkp~NIll~~~~~~kl~DFG~a~~~  413 (535)
T 2h8h_A          385 VHRDLRAANILVGENLVCKVADFGLARLI  413 (535)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCTTSTTTC
T ss_pred             eCCCCCHhhEEEcCCCcEEEcccccceec
Confidence                   8999999999999999998653

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.58  E-value=1.5e-14  Score=90.31  Aligned_cols=90  Identities=14%  Similarity=0.195  Sum_probs=77.6

Q ss_pred             CCcchhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245            8 MEEVPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      .......+.+|+.+++.++|||++++++.+. ...++++++++ +++.+.+......++...+..++.|++         
T Consensus        57 ~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~  136 (327)
T 3lzb_A           57 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR  136 (327)
T ss_dssp             SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSSEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCCceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence            3445677999999999999999999999999 77999999999 999999987665689999988888876         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               +||+++.++.+||+|||++..
T Consensus       137 ~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~  166 (327)
T 3lzb_A          137 RLVHRDLAARNVLVKTPQHVKITDFGLAKL  166 (327)
T ss_dssp             TCCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred             CCcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence                     899999999999999999864

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.58  E-value=1.2e-14  Score=89.14  Aligned_cols=87  Identities=17%  Similarity=0.263  Sum_probs=77.1

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      .....+.+|+.+++.++|||++++++.+. ...++++|+++ ++|.+++..... ++...+..++.|++           
T Consensus        60 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~LH~~~i  138 (291)
T 1xbb_A           60 ALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRH-VKDKNIIELVHQVSMGMKYLEESNF  138 (291)
T ss_dssp             HHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEEEECCTTEEHHHHHHHCTT-CCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHHHhCCCCCEEEEEEEECCCCcEEEEEeCCCCCHHHHHHhCcC-CCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            33567899999999999999999999998 88999999999 999999987653 88988888888876           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+|++|||++..
T Consensus       139 ~H~dikp~Nil~~~~~~~kl~Dfg~~~~  166 (291)
T 1xbb_A          139 VHRDLAARNVLLVTQHYAKISDFGLSKA  166 (291)
T ss_dssp             ECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             EcCCCCcceEEEeCCCcEEEccCCccee
Confidence                   899999999999999998753

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.58  E-value=1.1e-14  Score=90.48  Aligned_cols=88  Identities=28%  Similarity=0.392  Sum_probs=75.1

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCC-----CCCCHHHHHHHHHHhH------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPK-----DSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~-----~~~~~~~~~~~~~~~~------   76 (100)
                      .....+.+|+.+++.++||||+++++.+.  +..++++||++++|.+++....     ..++...+..++.|++      
T Consensus        45 ~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~l  124 (317)
T 2pmi_A           45 GTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC  124 (317)
T ss_dssp             CSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHH
Confidence            34567889999999999999999999998  8899999999999988875421     2378888888887866      


Q ss_pred             ------------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                  +||+++.++.+||+|||++..
T Consensus       125 H~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~  157 (317)
T 2pmi_A          125 HENKILHRDLKPQNLLINKRGQLKLGDFGLARA  157 (317)
T ss_dssp             HHTTEECCCCCGGGEEECTTCCEEECCCSSCEE
T ss_pred             HHCCeeeCCCChHHeEEcCCCCEEECcCcccee
Confidence                        899999999999999998853

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.58  E-value=2.6e-14  Score=87.00  Aligned_cols=86  Identities=20%  Similarity=0.226  Sum_probs=76.9

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  ...++++||++ ++|.+++.....+++...+..++.|++            
T Consensus        55 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~  134 (278)
T 3cok_A           55 VQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGIL  134 (278)
T ss_dssp             HHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            466889999999999999999999998  88999999998 899999987655689999998888866            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +||+++.++.+|++|||++..
T Consensus       135 H~dl~p~Nili~~~~~~kl~dfg~~~~  161 (278)
T 3cok_A          135 HRDLTLSNLLLTRNMNIKIADFGLATQ  161 (278)
T ss_dssp             CSSCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             cCCCCHHHEEEcCCCCEEEEeecceee
Confidence                  899999999999999998753

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.58  E-value=1.1e-14  Score=90.34  Aligned_cols=90  Identities=17%  Similarity=0.102  Sum_probs=77.2

Q ss_pred             CCCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC---CCCCHHHHHHHHHHhH----
Q 034245            7 TMEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK---DSMDGYSIKFSSSDSL----   76 (100)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~---~~~~~~~~~~~~~~~~----   76 (100)
                      ........+.+|+..++.++|||++++++.+.  +..++++||++ ++|.+++....   ..+++..+..++.|++    
T Consensus        74 ~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~  153 (321)
T 2qkw_B           74 ESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH  153 (321)
T ss_dssp             CCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHH
T ss_pred             cChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHH
Confidence            34445667899999999999999999999988  88999999999 99999987643   2378888888888865    


Q ss_pred             --------------hcccccCCCeEEEeecCCCC
Q 034245           77 --------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 --------------~nil~~~~~~~ki~dfgl~~   96 (100)
                                    +||+++.++.+|++|||++.
T Consensus       154 ~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~  187 (321)
T 2qkw_B          154 YLHTRAIIHRDVKSINILLDENFVPKITDFGISK  187 (321)
T ss_dssp             HHHHTTEECSCCCSTTEEECTTCCEEECCCTTCE
T ss_pred             HhcCCCeecCCCCHHHEEECCCCCEEEeeccccc
Confidence                          89999999999999999875

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.58  E-value=1.5e-14  Score=91.52  Aligned_cols=85  Identities=22%  Similarity=0.316  Sum_probs=73.7

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+..++.++||||+++++++.  ...++++||++ ++|.+.+..... ++...+..++.|++           
T Consensus        59 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~i~~ql~~~L~~LH~~~i  137 (361)
T 3uc3_A           59 IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGR-FSEDEARFFFQQLLSGVSYCHSMQI  137 (361)
T ss_dssp             SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            3467889999999999999999999998  88999999998 999999876543 89999999988876           


Q ss_pred             -------hcccccCCCe--EEEeecCCCC
Q 034245           77 -------RCCLLSFGKT--VKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~~~--~ki~dfgl~~   96 (100)
                             +||+++.++.  +||+|||++.
T Consensus       138 vH~Dlkp~Nill~~~~~~~~kl~Dfg~a~  166 (361)
T 3uc3_A          138 CHRDLKLENTLLDGSPAPRLKICDFGYSK  166 (361)
T ss_dssp             CSCCCCGGGEEECSSSSCCEEECCCCCC-
T ss_pred             ccCCCCHHHEEEcCCCCceEEEeecCccc
Confidence                   8999986654  9999999885

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.58  E-value=8.8e-15  Score=93.78  Aligned_cols=86  Identities=19%  Similarity=0.245  Sum_probs=75.1

Q ss_pred             chhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           11 VPSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      ....+.+|..++..+ +||||+++++.+.  ..+++++||++ ++|...+..... +++..+..++.|++          
T Consensus        95 ~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~-l~~~~~~~~~~qi~~aL~~LH~~g  173 (396)
T 4dc2_A           95 DIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEISLALNYLHERG  173 (396)
T ss_dssp             -CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCC
Confidence            345688899998876 8999999999998  88999999999 999999876543 89999999988866          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +||+++.++.+||+|||++..
T Consensus       174 ivHrDLKp~NILl~~~g~ikL~DFGla~~  202 (396)
T 4dc2_A          174 IIYRDLKLDNVLLDSEGHIKLTDYGMCKE  202 (396)
T ss_dssp             CBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             EEeccCCHHHEEECCCCCEEEeecceeee
Confidence                    899999999999999999864

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.58  E-value=4.6e-15  Score=92.34  Aligned_cols=88  Identities=19%  Similarity=0.236  Sum_probs=76.8

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      .....+.+|+..++.++||||+++++++. ...++++||++ ++|.+.+......+++..+..++.|++           
T Consensus        57 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  136 (325)
T 3kex_A           57 QSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGM  136 (325)
T ss_dssp             SCBCSCCHHHHHHHTCCCTTBCCEEEEECBSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence            34467889999999999999999999988 88999999999 999999987654588888888887765           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+||+|||++..
T Consensus       137 vH~Dikp~Nil~~~~~~~kl~Dfg~a~~  164 (325)
T 3kex_A          137 VHRNLAARNVLLKSPSQVQVADFGVADL  164 (325)
T ss_dssp             CCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred             CCCccchheEEECCCCeEEECCCCcccc
Confidence                   899999999999999999864

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.58  E-value=1.6e-14  Score=88.70  Aligned_cols=87  Identities=20%  Similarity=0.244  Sum_probs=76.0

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      ....+.+|+.+++.++|||++++++.+.    ...++++||++ ++|.+++......++...+..++.|++         
T Consensus        66 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~  145 (302)
T 4e5w_A           66 HIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR  145 (302)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC
Confidence            4467889999999999999999999987    55899999999 899999966555589999888888866         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               +||+++.++.+|++|||++..
T Consensus       146 ~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~  175 (302)
T 4e5w_A          146 QYVHRDLAARNVLVESEHQVKIGDFGLTKA  175 (302)
T ss_dssp             TEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             CcccCCCchheEEEcCCCCEEECccccccc
Confidence                     899999999999999998853

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.58  E-value=1.6e-14  Score=87.92  Aligned_cols=87  Identities=22%  Similarity=0.241  Sum_probs=75.6

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      .....+.+|+.+++.++|||++++++.+.  ...++++||++ ++|.+.+..... +++..+..++.|++          
T Consensus        48 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~i~~~i~~~l~~lH~~~  126 (277)
T 3f3z_A           48 EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRV-FRESDAARIMKDVLSAVAYCHKLN  126 (277)
T ss_dssp             SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34567899999999999999999999998  78999999999 899888876543 88999888888866          


Q ss_pred             --------hcccc---cCCCeEEEeecCCCCC
Q 034245           77 --------RCCLL---SFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~---~~~~~~ki~dfgl~~~   97 (100)
                              +||++   +.++.+|++|||++..
T Consensus       127 i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~  158 (277)
T 3f3z_A          127 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR  158 (277)
T ss_dssp             EECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred             ccCCCCCHHHEEEecCCCCCcEEEEeccccee
Confidence                    89999   7788999999998853

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.58  E-value=1.2e-14  Score=93.67  Aligned_cols=86  Identities=30%  Similarity=0.342  Sum_probs=75.9

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee-------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS-------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~-------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------   76 (100)
                      ....+.+|+.+++.++||||+++++++.       ..+|+++|+++++|.+.+.... .++...+..++.|++       
T Consensus        68 ~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH  146 (432)
T 3n9x_A           68 DCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPI-FLTEEHIKTILYNLLLGENFIH  146 (432)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEECCSEEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEecCCcCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            3457889999999999999999999987       3589999999999999998754 389999999998876       


Q ss_pred             -----------hcccccCCCeEEEeecCCCCC
Q 034245           77 -----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                 +||+++.++.+||+|||++..
T Consensus       147 ~~givHrDlkp~NILl~~~~~~kL~DFGla~~  178 (432)
T 3n9x_A          147 ESGIIHRDLKPANCLLNQDCSVKVCDFGLART  178 (432)
T ss_dssp             HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             HCCCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence                       899999999999999999864

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.58  E-value=8.9e-15  Score=91.29  Aligned_cols=85  Identities=22%  Similarity=0.239  Sum_probs=69.9

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++||||+++++.+.  +..++++||++ ++|.+.+..... ++...+..++.|++            
T Consensus        65 ~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~al~~lH~~~iv  143 (327)
T 3a62_A           65 TAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGI-FMEDTACFYLAEISMALGHLHQKGII  143 (327)
T ss_dssp             ------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEECCTTEEHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEeCCCCCcHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence            455788999999999999999999998  88999999999 999999876543 88888888888865            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +||+++.++.+||+|||++..
T Consensus       144 H~Dlkp~Nill~~~~~~kl~Dfg~~~~  170 (327)
T 3a62_A          144 YRDLKPENIMLNHQGHVKLTDFGLCKE  170 (327)
T ss_dssp             CCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred             cccCCHHHeEECCCCcEEEEeCCcccc
Confidence                  899999999999999998753

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.58  E-value=8.8e-15  Score=91.28  Aligned_cols=87  Identities=37%  Similarity=0.427  Sum_probs=71.2

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      ......+.+|+.+++.++|||++++++.+.  ...++++||++++|.+++..... ++...+..++.|++          
T Consensus        74 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~-~~~~~~~~i~~ql~~~l~~LH~~~  152 (329)
T 3gbz_A           74 EGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPD-VSMRVIKSFLYQLINGVNFCHSRR  152 (329)
T ss_dssp             ------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHCTT-CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCCCCHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHHhCC
Confidence            334566889999999999999999999998  88999999999999999887654 89999988888876          


Q ss_pred             --------hccccc-----CCCeEEEeecCCCC
Q 034245           77 --------RCCLLS-----FGKTVKVADLQALD   96 (100)
Q Consensus        77 --------~nil~~-----~~~~~ki~dfgl~~   96 (100)
                              +||++.     ..+.+||+|||++.
T Consensus       153 ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~  185 (329)
T 3gbz_A          153 CLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR  185 (329)
T ss_dssp             CCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred             EECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence                    899994     45569999999874

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.57  E-value=9.9e-15  Score=91.05  Aligned_cols=86  Identities=27%  Similarity=0.456  Sum_probs=75.0

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC-----------------------CCCC
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK-----------------------DSMD   64 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~-----------------------~~~~   64 (100)
                      ....+.+|+.+++.++|||++++++.+.  ...++++||++ ++|.+++....                       .+++
T Consensus        93 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  172 (343)
T 1luf_A           93 MQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS  172 (343)
T ss_dssp             HHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCC
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCC
Confidence            3456889999999999999999999998  88999999999 89999987632                       3478


Q ss_pred             HHHHHHHHHHhH------------------hcccccCCCeEEEeecCCCC
Q 034245           65 GYSIKFSSSDSL------------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        65 ~~~~~~~~~~~~------------------~nil~~~~~~~ki~dfgl~~   96 (100)
                      +..+..++.|++                  +||+++.++.+||+|||++.
T Consensus       173 ~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~  222 (343)
T 1luf_A          173 CAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSR  222 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEEEeecCCCc
Confidence            888888888866                  89999999999999999874

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.57  E-value=2.5e-14  Score=87.37  Aligned_cols=91  Identities=20%  Similarity=0.348  Sum_probs=78.0

Q ss_pred             CCCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH------
Q 034245            7 TMEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL------   76 (100)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~------   76 (100)
                      .+......+.+|+.+++.++|||++++++.+.  ...++++|+++ ++|.+++.... ..++...+..++.|++      
T Consensus        48 ~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~l  127 (288)
T 3kfa_A           48 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL  127 (288)
T ss_dssp             SCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHH
Confidence            34445677999999999999999999999998  88999999999 99999997643 3388888888877765      


Q ss_pred             ------------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                  +||+++.++.+|++|||++..
T Consensus       128 H~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~  160 (288)
T 3kfa_A          128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRL  160 (288)
T ss_dssp             HHHTCCCSCCSGGGEEECGGGCEEECCCCGGGT
T ss_pred             HHCCccCCCCCcceEEEcCCCCEEEccCcccee
Confidence                        899999999999999998864

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.57  E-value=2.1e-14  Score=90.74  Aligned_cols=85  Identities=20%  Similarity=0.317  Sum_probs=75.0

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+.+|..+++.+ +||||+++++.+.  ..+|+++||++ ++|...+..... +++..+..++.|++           
T Consensus        67 ~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~gi  145 (353)
T 3txo_A           67 VECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR-FDEARARFYAAEIISALMFLHDKGI  145 (353)
T ss_dssp             HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            35577899999988 7999999999998  88999999999 999999876543 89999999988866           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+||+|||++..
T Consensus       146 vHrDlkp~NILl~~~g~ikL~DFG~a~~  173 (353)
T 3txo_A          146 IYRDLKLDNVLLDHEGHCKLADFGMCKE  173 (353)
T ss_dssp             BCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             cccCCCHHHEEECCCCCEEEccccceee
Confidence                   899999999999999999864

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.57  E-value=1e-14  Score=90.47  Aligned_cols=87  Identities=28%  Similarity=0.307  Sum_probs=72.1

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCC--CCCHHHHHHHHHHhH---------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKD--SMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~--~~~~~~~~~~~~~~~---------   76 (100)
                      ....+.+|+.+++.++|||++++++.+.  ...++++||++ ++|.+++.....  .+++..+..++.|++         
T Consensus        77 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~  156 (309)
T 3p86_A           77 RVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR  156 (309)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC
Confidence            3456889999999999999999999998  78999999999 899999976542  278888887877765         


Q ss_pred             -----------hcccccCCCeEEEeecCCCCC
Q 034245           77 -----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                 +||+++.++.+||+|||++..
T Consensus       157 ~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~  188 (309)
T 3p86_A          157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL  188 (309)
T ss_dssp             SSCCCCTTCCGGGEEECTTCCEEECCCC----
T ss_pred             CCCEECCCCChhhEEEeCCCcEEECCCCCCcc
Confidence                       799999999999999998853

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.57  E-value=4.1e-14  Score=88.76  Aligned_cols=89  Identities=25%  Similarity=0.302  Sum_probs=76.4

Q ss_pred             CCcchhhHHHHHHHHhhCCCCcceeeeeeee----------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-
Q 034245            8 MEEVPSSMIREVSCLMELNHPNIIRLMLVVS----------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-   76 (100)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~----------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-   76 (100)
                      .......+.+|+.+++.++|||++++++.+.          +..++++||+++++...+......++...+..++.|++ 
T Consensus        56 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~  135 (351)
T 3mi9_A           56 KEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN  135 (351)
T ss_dssp             SSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHH
Confidence            3344567889999999999999999999887          24799999999888888877655689999999988876 


Q ss_pred             -----------------hcccccCCCeEEEeecCCCC
Q 034245           77 -----------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -----------------~nil~~~~~~~ki~dfgl~~   96 (100)
                                       +||+++.++.+||+|||++.
T Consensus       136 ~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~  172 (351)
T 3mi9_A          136 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR  172 (351)
T ss_dssp             HHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             HHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence                             89999999999999999874

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.57  E-value=1.2e-14  Score=91.48  Aligned_cols=85  Identities=19%  Similarity=0.258  Sum_probs=75.0

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+.+|..+++.+ +||||+++++.+.  ..+|+++||++ ++|...+.... .+++..+..++.|++           
T Consensus        53 ~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~~i  131 (345)
T 3a8x_A           53 IDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHERGI  131 (345)
T ss_dssp             HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            45578899999887 8999999999998  88999999999 89999987654 389999998888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+||+|||++..
T Consensus       132 vHrDlkp~NIll~~~g~~kL~DFG~a~~  159 (345)
T 3a8x_A          132 IYRDLKLDNVLLDSEGHIKLTDYGMCKE  159 (345)
T ss_dssp             BCCCCCGGGEEECTTSCEEECCGGGCBC
T ss_pred             eecCCCHHHEEECCCCCEEEEecccccc
Confidence                   899999999999999999864

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.57  E-value=1.4e-14  Score=90.93  Aligned_cols=86  Identities=27%  Similarity=0.343  Sum_probs=75.5

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  ...++++||+++++...+......+++..+..++.|++             
T Consensus        56 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH  135 (346)
T 1ua2_A           56 NRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILH  135 (346)
T ss_dssp             CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             hHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEEC
Confidence            456889999999999999999999998  88999999999889888877655578888888887765             


Q ss_pred             -----hcccccCCCeEEEeecCCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~~   97 (100)
                           +||+++.++.+||+|||++..
T Consensus       136 ~Dlkp~Nil~~~~~~~kl~Dfg~a~~  161 (346)
T 1ua2_A          136 RDLKPNNLLLDENGVLKLADFGLAKS  161 (346)
T ss_dssp             CCCCGGGEEECTTCCEEECCCGGGST
T ss_pred             CCCCHHHEEEcCCCCEEEEeccccee
Confidence                 899999999999999999864

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.57  E-value=1.1e-14  Score=89.54  Aligned_cols=88  Identities=18%  Similarity=0.285  Sum_probs=75.1

Q ss_pred             CCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH--------
Q 034245            8 MEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~--------   76 (100)
                      .......+.+|+.+++.++|||++++++.+.  +..++++|+++ +++..++......++...+..++.|++        
T Consensus        56 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~  135 (302)
T 2j7t_A           56 SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS  135 (302)
T ss_dssp             --CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhc
Confidence            3445677899999999999999999999988  88999999999 899988876444589999888888866        


Q ss_pred             ----------hcccccCCCeEEEeecCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQAL   95 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~   95 (100)
                                +||+++.++.+|++|||++
T Consensus       136 ~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~  164 (302)
T 2j7t_A          136 KRIIHRDLKAGNVLMTLEGDIRLADFGVS  164 (302)
T ss_dssp             TTCCCCCCSGGGEEECTTSCEEECCCHHH
T ss_pred             CCcccCCCCHHHEEECCCCCEEEEECCCC
Confidence                      8999999999999999975

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.57  E-value=2.2e-14  Score=96.81  Aligned_cols=88  Identities=23%  Similarity=0.349  Sum_probs=77.7

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ..+.+.+|+.+++.++||||+++++.+. +..++++||++ ++|.+++......+++..+..++.|++            
T Consensus       434 ~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~giv  513 (656)
T 2j0j_A          434 VREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFV  513 (656)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHhCCCCCCCeEEEEEecCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            3467889999999999999999999988 88999999999 999999987655588888888888866            


Q ss_pred             ------hcccccCCCeEEEeecCCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                            +||+++.++.+||+|||++...
T Consensus       514 HrDikp~NILl~~~~~vkL~DFG~a~~~  541 (656)
T 2j0j_A          514 HRDIAARNVLVSSNDCVKLGDFGLSRYM  541 (656)
T ss_dssp             CSCCSGGGEEEEETTEEEECCCCCCCSC
T ss_pred             ccccchHhEEEeCCCCEEEEecCCCeec
Confidence                  8999999999999999998643

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.56  E-value=2.8e-14  Score=89.18  Aligned_cols=88  Identities=22%  Similarity=0.333  Sum_probs=74.9

Q ss_pred             cchhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCC----------------------CC
Q 034245           10 EVPSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKD----------------------SM   63 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~----------------------~~   63 (100)
                      .....+.+|+.+++.+ +||||+++++.+.  +..++++||++ ++|.+++.....                      .+
T Consensus        90 ~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  169 (344)
T 1rjb_A           90 SEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL  169 (344)
T ss_dssp             --CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------C
T ss_pred             HHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccC
Confidence            3456789999999999 8999999999998  88999999999 899999976542                      26


Q ss_pred             CHHHHHHHHHHhH------------------hcccccCCCeEEEeecCCCCC
Q 034245           64 DGYSIKFSSSDSL------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        64 ~~~~~~~~~~~~~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      ++..+..++.|++                  +||+++.++.+||+|||++..
T Consensus       170 ~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~  221 (344)
T 1rjb_A          170 TFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARD  221 (344)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSC
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeCCCccCcc
Confidence            7777888888866                  899999999999999999863

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.56  E-value=1.7e-14  Score=88.71  Aligned_cols=84  Identities=19%  Similarity=0.317  Sum_probs=72.0

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      .+.+.+|+.+++.++|||++++++.+.    ...++++||++ +++.+.....  ++++..+..++.|++          
T Consensus        80 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~  157 (298)
T 2zv2_A           80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK--PLSEDQARFYFQDLIKGIEYLHYQK  157 (298)
T ss_dssp             -CHHHHHHHHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS--CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            456899999999999999999999987    56899999999 8887765432  489999888888866          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +||+++.++.+||+|||++..
T Consensus       158 ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~  186 (298)
T 2zv2_A          158 IIHRDIKPSNLLVGEDGHIKIADFGVSNE  186 (298)
T ss_dssp             EECCCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             eeccCCCHHHEEECCCCCEEEecCCCccc
Confidence                    899999999999999998853

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.56  E-value=3.7e-14  Score=87.51  Aligned_cols=85  Identities=25%  Similarity=0.365  Sum_probs=74.2

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  ...++++||++ +++...+.... +++...+..++.|++            
T Consensus        46 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~i~~~l~~~l~~lH~~~iv  124 (311)
T 4agu_A           46 KKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQR-GVPEHLVKSITWQTLQAVNFCHKHNCI  124 (311)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTSS-CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCchHHHHHhhhc-CCCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence            456789999999999999999999998  88999999999 77877776554 489998888888866            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +||+++.++.+||+|||++..
T Consensus       125 H~dlkp~Nil~~~~~~~kl~Dfg~~~~  151 (311)
T 4agu_A          125 HRDVKPENILITKHSVIKLCDFGFARL  151 (311)
T ss_dssp             CCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             CCCCChhhEEEcCCCCEEEeeCCCchh
Confidence                  899999999999999998853

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.56  E-value=3.5e-14  Score=87.03  Aligned_cols=86  Identities=26%  Similarity=0.313  Sum_probs=75.3

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee---ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS---QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~---~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      .+.+.+|+.+++.++|||++++++.+.   ...++++|++. ++|.+++......++...+..++.|++           
T Consensus        66 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i  145 (298)
T 3pls_A           66 VEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKF  145 (298)
T ss_dssp             HHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            457889999999999999999999997   44589999998 999999987655688888888888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+|++|||++..
T Consensus       146 ~H~dikp~Nili~~~~~~kl~Dfg~~~~  173 (298)
T 3pls_A          146 VHRDLAARNCMLDESFTVKVADFGLARD  173 (298)
T ss_dssp             CCSCCSGGGEEECTTCCEEECCTTSSCT
T ss_pred             ccCCCCcceEEEcCCCcEEeCcCCCccc
Confidence                   899999999999999999853

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.56  E-value=1.5e-14  Score=88.25  Aligned_cols=87  Identities=20%  Similarity=0.335  Sum_probs=76.5

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ....+.+|+.+++.++|||++++++++. ...++++|+++ ++|.+++......++...+..++.|++            
T Consensus        56 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~  135 (281)
T 3cc6_A           56 NKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCV  135 (281)
T ss_dssp             HHHHHHHHHHHHHHHCCTTBCCEEEEECSSSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            3467889999999999999999999988 77899999999 999999976555588888888888765            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +||+++.++.+|++|||++..
T Consensus       136 H~dlkp~Nil~~~~~~~kl~Dfg~~~~  162 (281)
T 3cc6_A          136 HRDIAVRNILVASPECVKLGDFGLSRY  162 (281)
T ss_dssp             CCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred             cCCCccceEEECCCCcEEeCccCCCcc
Confidence                  899999999999999998864

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.56  E-value=5.9e-14  Score=86.99  Aligned_cols=89  Identities=18%  Similarity=0.188  Sum_probs=72.8

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee--c-----------------------------------------------
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS--Q-----------------------------------------------   39 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~-----------------------------------------------   39 (100)
                      +.....+.+|+.+++.++||||+++++.+.  .                                               
T Consensus        45 ~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (332)
T 3qd2_B           45 ELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTV  124 (332)
T ss_dssp             TTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC-------------------------------------
T ss_pred             hhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCccccc
Confidence            345567999999999999999999999875  1                                               


Q ss_pred             ----------cEEEEEeccc-ccHHHHhccCCC--CCCHHHHHHHHHHhH------------------hcccccCCCeEE
Q 034245           40 ----------GLCLFLEYQA-NDLAYLLKYPKD--SMDGYSIKFSSSDSL------------------RCCLLSFGKTVK   88 (100)
Q Consensus        40 ----------~~~lv~e~~~-~~l~~~l~~~~~--~~~~~~~~~~~~~~~------------------~nil~~~~~~~k   88 (100)
                                ..++++||++ ++|.+++.....  ..+...+..++.|++                  +||+++.++.+|
T Consensus       125 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~k  204 (332)
T 3qd2_B          125 GQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVK  204 (332)
T ss_dssp             -------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEE
T ss_pred             ccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEE
Confidence                      2799999999 899999977542  145556677777765                  899999999999


Q ss_pred             EeecCCCCC
Q 034245           89 VADLQALDW   97 (100)
Q Consensus        89 i~dfgl~~~   97 (100)
                      |+|||++..
T Consensus       205 L~DfG~a~~  213 (332)
T 3qd2_B          205 VGDFGLVTA  213 (332)
T ss_dssp             ECCCTTCEE
T ss_pred             EeecCcccc
Confidence            999999754

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.55  E-value=2.2e-14  Score=88.44  Aligned_cols=86  Identities=22%  Similarity=0.318  Sum_probs=74.5

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCC-----------------------CCC
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKD-----------------------SMD   64 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~-----------------------~~~   64 (100)
                      ....+.+|+.+++.++|||++++++.+.  +..++++||++ ++|.+++.....                       .++
T Consensus        69 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (314)
T 2ivs_A           69 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT  148 (314)
T ss_dssp             HHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEEC
T ss_pred             HHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcC
Confidence            3466889999999999999999999998  88999999999 999999875431                       267


Q ss_pred             HHHHHHHHHHhH------------------hcccccCCCeEEEeecCCCC
Q 034245           65 GYSIKFSSSDSL------------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        65 ~~~~~~~~~~~~------------------~nil~~~~~~~ki~dfgl~~   96 (100)
                      ...+..++.|++                  +||+++.++.+||+|||++.
T Consensus       149 ~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~  198 (314)
T 2ivs_A          149 MGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR  198 (314)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCE
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCCCEEEccccccc
Confidence            788888888866                  89999999999999999885

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.55  E-value=2.9e-14  Score=89.86  Aligned_cols=85  Identities=20%  Similarity=0.287  Sum_probs=74.5

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+.+|..++..+ +|||++++++.+.  ...|+++||++ |+|...+..... +++..+..++.|++           
T Consensus        61 ~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~~i  139 (345)
T 1xjd_A           61 VECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEIILGLQFLHSKGI  139 (345)
T ss_dssp             HHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            45577899988876 9999999999998  88999999999 999999876543 89999988888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+||+|||++..
T Consensus       140 vHrDlkp~NIll~~~g~vkL~DFG~a~~  167 (345)
T 1xjd_A          140 VYRDLKLDNILLDKDGHIKIADFGMCKE  167 (345)
T ss_dssp             BCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             EeCCCChhhEEECCCCCEEEeEChhhhh
Confidence                   899999999999999999864

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.55  E-value=3.8e-14  Score=91.14  Aligned_cols=85  Identities=22%  Similarity=0.230  Sum_probs=73.6

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH--------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL--------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~--------------   76 (100)
                      ..+.+|+.++++++||||+++++.+. ...++++||++ ++|.+.+.... .+++..+..++.|++              
T Consensus       185 ~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~ivHr  263 (419)
T 3i6u_A          185 LNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLHENGIIHR  263 (419)
T ss_dssp             CCHHHHHHHHHHCCCTTBCCCCEEEESSEEEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             HHHHHHHHHHHhCCCCCEeeEEEEEecCceEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence            45889999999999999999999988 88899999999 99999887655 389999988888876              


Q ss_pred             ----hcccccCC---CeEEEeecCCCCCC
Q 034245           77 ----RCCLLSFG---KTVKVADLQALDWP   98 (100)
Q Consensus        77 ----~nil~~~~---~~~ki~dfgl~~~~   98 (100)
                          +||+++..   +.+||+|||++...
T Consensus       264 Dlkp~NIll~~~~~~~~~kl~DFG~a~~~  292 (419)
T 3i6u_A          264 DLKPENVLLSSQEEDCLIKITDFGHSKIL  292 (419)
T ss_dssp             CCCGGGEEESSSSSSCCEEECCSSTTTSC
T ss_pred             CCChHhEEEecCCCcceEEEeecccceec
Confidence                89999754   45999999998654

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.55  E-value=8.1e-15  Score=91.27  Aligned_cols=85  Identities=28%  Similarity=0.343  Sum_probs=75.3

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH--------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL--------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~--------------   76 (100)
                      ..+.+|+.+++.++|||++++++++.  ...++++||+++++.+.+......++...+..++.|++              
T Consensus        45 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~  124 (324)
T 3mtl_A           45 CTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHR  124 (324)
T ss_dssp             CCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEES
T ss_pred             hhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCC
Confidence            35678999999999999999999998  88999999999999998887665688888888888866              


Q ss_pred             ----hcccccCCCeEEEeecCCCCC
Q 034245           77 ----RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----~nil~~~~~~~ki~dfgl~~~   97 (100)
                          +||+++.++.+||+|||++..
T Consensus       125 Dikp~NIl~~~~~~~kl~Dfg~a~~  149 (324)
T 3mtl_A          125 DLKPQNLLINERGELKLADFGLARA  149 (324)
T ss_dssp             SCCGGGEEECTTCCEEECSSSEEEC
T ss_pred             CcCHHHEEECCCCCEEEccCccccc
Confidence                899999999999999998754

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.55  E-value=3.3e-14  Score=86.57  Aligned_cols=88  Identities=22%  Similarity=0.299  Sum_probs=76.1

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~----------   76 (100)
                      .....+.+|+.+++.++|||++++++.+. +..++++|+++ ++|.+++.... ..++...+..++.|++          
T Consensus        50 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  129 (279)
T 1qpc_A           50 MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN  129 (279)
T ss_dssp             SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccHHHHHHHHHHHHhCCCcCcceEEEEEcCCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34567899999999999999999999988 88999999998 99999987643 1388888888888866          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +||+++.++.+|++|||++..
T Consensus       130 i~H~dikp~Nil~~~~~~~kl~Dfg~~~~  158 (279)
T 1qpc_A          130 YIHRDLRAANILVSDTLSCKIADFGLARL  158 (279)
T ss_dssp             EECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             eeccCCCHhhEEEcCCCCEEECCCccccc
Confidence                    899999999999999998853

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.55  E-value=4.9e-14  Score=87.50  Aligned_cols=85  Identities=22%  Similarity=0.225  Sum_probs=75.0

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      ....+.+|+.+++.++|||++++++.+.    ...++++||++ ++|.+++....  ++...+..++.|++         
T Consensus        76 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH~~  153 (318)
T 3lxp_A           76 HRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHAQ  153 (318)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHHhC
Confidence            3456899999999999999999999987    56899999999 89999997754  88888888888866         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               +||+++.++.+||+|||++..
T Consensus       154 ~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~  183 (318)
T 3lxp_A          154 HYIHRDLAARNVLLDNDRLVKIGDFGLAKA  183 (318)
T ss_dssp             TEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred             CccCCCCchheEEEcCCCCEEECCcccccc
Confidence                     899999999999999998853

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.55  E-value=3.4e-14  Score=92.93  Aligned_cols=87  Identities=21%  Similarity=0.246  Sum_probs=74.3

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      .....+.+|+.+++.++||||+++++++.  ...++++||++ ++|.+.+.... ++++..+..++.|++          
T Consensus        78 ~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~  156 (494)
T 3lij_A           78 SSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLHKHN  156 (494)
T ss_dssp             CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            33567889999999999999999999999  88999999999 89988886654 389999888888876          


Q ss_pred             --------hcccccC---CCeEEEeecCCCCC
Q 034245           77 --------RCCLLSF---GKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~---~~~~ki~dfgl~~~   97 (100)
                              +||++..   .+.+||+|||++..
T Consensus       157 ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~  188 (494)
T 3lij_A          157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAV  188 (494)
T ss_dssp             EECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred             ceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence                    8999975   45699999998853

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.54  E-value=3.6e-14  Score=87.46  Aligned_cols=88  Identities=25%  Similarity=0.302  Sum_probs=76.0

Q ss_pred             chhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCC-----------------CCCHHHHH
Q 034245           11 VPSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKD-----------------SMDGYSIK   69 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~-----------------~~~~~~~~   69 (100)
                      ....+.+|+.+++.+ +|||++++++.+.  +..++++||++ ++|.+++.....                 .+++..+.
T Consensus        69 ~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (313)
T 1t46_A           69 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL  148 (313)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHH
T ss_pred             HHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHH
Confidence            346788999999999 9999999999998  88999999999 899999876532                 37888888


Q ss_pred             HHHHHhH------------------hcccccCCCeEEEeecCCCCCC
Q 034245           70 FSSSDSL------------------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        70 ~~~~~~~------------------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                      .++.|++                  +||+++.++.+|++|||++...
T Consensus       149 ~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  195 (313)
T 1t46_A          149 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDI  195 (313)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCT
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEccccccccc
Confidence            8888866                  8999999999999999998643

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.54  E-value=6.1e-14  Score=86.68  Aligned_cols=89  Identities=17%  Similarity=0.223  Sum_probs=75.1

Q ss_pred             CCcchhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------
Q 034245            8 MEEVPSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------   76 (100)
                      .......+.+|+..+.++ +|||++++++.+.  +..++++||++ ++|.+.+.... .++...+..++.|++       
T Consensus        50 ~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH  128 (316)
T 2ac3_A           50 PGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLH  128 (316)
T ss_dssp             SSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            344567789999999885 7999999999998  88999999999 99999987654 388888888888866       


Q ss_pred             -----------hcccccCCCe---EEEeecCCCCC
Q 034245           77 -----------RCCLLSFGKT---VKVADLQALDW   97 (100)
Q Consensus        77 -----------~nil~~~~~~---~ki~dfgl~~~   97 (100)
                                 +||+++.++.   +|++|||++..
T Consensus       129 ~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~  163 (316)
T 2ac3_A          129 NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSG  163 (316)
T ss_dssp             HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred             hCCceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence                       8999987665   99999998753

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.54  E-value=4.3e-14  Score=88.56  Aligned_cols=85  Identities=16%  Similarity=0.240  Sum_probs=75.4

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-c-cHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-N-DLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~-~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+.+|+.+++.++||||+++++++.  +..++++|++. + ++..++..... +++..+..++.|++           
T Consensus        73 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~~-l~~~~~~~i~~qi~~~L~~LH~~~i  151 (335)
T 3dls_A           73 LGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPR-LDEPLASYIFRQLVSAVGYLRLKDI  151 (335)
T ss_dssp             TEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTSCBHHHHHHTCCC-CCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            456889999999999999999999998  88999999997 6 99999887654 89999988888876           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+||+|||++..
T Consensus       152 vH~Dlkp~NIll~~~~~~kL~Dfg~a~~  179 (335)
T 3dls_A          152 IHRDIKDENIVIAEDFTIKLIDFGSAAY  179 (335)
T ss_dssp             ECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEeccCHHHEEEcCCCcEEEeecccceE
Confidence                   899999999999999998853

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.54  E-value=6.4e-14  Score=87.35  Aligned_cols=85  Identities=22%  Similarity=0.279  Sum_probs=72.2

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++++++.  ...++++||++ +.+..+..... +++...+..++.|++            
T Consensus        68 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~iv  146 (331)
T 4aaa_A           68 KKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCHSHNII  146 (331)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHSTT-CCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcchHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence            455789999999999999999999998  88999999999 77776655444 489999988888866            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +||+++.++.+||+|||++..
T Consensus       147 H~dlkp~Nil~~~~~~~kl~Dfg~~~~  173 (331)
T 4aaa_A          147 HRDIKPENILVSQSGVVKLCDFGFART  173 (331)
T ss_dssp             CCCCCGGGEEECTTSCEEECCCTTC--
T ss_pred             ccCcChheEEEcCCCcEEEEeCCCcee
Confidence                  899999999999999999854

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.54  E-value=3.9e-14  Score=88.56  Aligned_cols=86  Identities=17%  Similarity=0.142  Sum_probs=75.8

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++|||++++++.+.  ...++++||+. ++|.+++.... .++...+..++.|++           
T Consensus        84 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~i  162 (335)
T 2owb_A           84 QREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNRV  162 (335)
T ss_dssp             HHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            4567889999999999999999999998  88999999999 99999887654 389999888888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+||+|||++..
T Consensus       163 vH~dlkp~NIl~~~~~~~kl~Dfg~~~~  190 (335)
T 2owb_A          163 IHRDLKLGNLFLNEDLEVKIGDFGLATK  190 (335)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EecCCCchhEEEcCCCCEEEeeccCcee
Confidence                   899999999999999999853

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.54  E-value=5.1e-14  Score=92.27  Aligned_cols=86  Identities=23%  Similarity=0.310  Sum_probs=75.1

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++||||+++++++.  ...++++||++ ++|.+.+.... .+++..+..++.|++           
T Consensus        89 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i  167 (504)
T 3q5i_A           89 FHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLHKHNI  167 (504)
T ss_dssp             THHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            3567889999999999999999999999  88999999999 89999887654 389999999988876           


Q ss_pred             -------hcccccCCC---eEEEeecCCCCC
Q 034245           77 -------RCCLLSFGK---TVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~---~~ki~dfgl~~~   97 (100)
                             +||++..++   .+||+|||++..
T Consensus       168 vH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~  198 (504)
T 3q5i_A          168 VHRDIKPENILLENKNSLLNIKIVDFGLSSF  198 (504)
T ss_dssp             ECSCCSGGGEEESSTTCCSSEEECCCTTCEE
T ss_pred             EeCCCcHHHEEEecCCCCccEEEEECCCCEE
Confidence                   899998765   699999999853

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.54  E-value=8.8e-14  Score=92.75  Aligned_cols=86  Identities=17%  Similarity=0.228  Sum_probs=75.6

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+.+|+.+++.++||||+++++.+.  ..+++++||++ |+|...+.... ..+++..+..++.|++           
T Consensus       228 ~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gI  307 (576)
T 2acx_A          228 EAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERI  307 (576)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            355789999999999999999999998  88999999999 99999887643 2388999988888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+||+|||++..
T Consensus       308 vHrDLKPeNILld~~g~vKL~DFGla~~  335 (576)
T 2acx_A          308 VYRDLKPENILLDDHGHIRISDLGLAVH  335 (576)
T ss_dssp             ECCCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             eccCCchheEEEeCCCCeEEEeccccee
Confidence                   899999999999999999853

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.53  E-value=7.2e-14  Score=88.29  Aligned_cols=86  Identities=17%  Similarity=0.196  Sum_probs=75.6

Q ss_pred             chhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           11 VPSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      ....+.+|..++..+ +||+++++++.+.  ..+|+++||++ ++|...+..... +++..+..++.|++          
T Consensus        63 ~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~g  141 (353)
T 2i0e_A           63 DVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR-FKEPHAVFYAAEIAIGLFFLQSKG  141 (353)
T ss_dssp             CHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCC
Confidence            345678899999887 8999999999998  88999999999 899999876543 89999998888866          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +||+++.++.+||+|||++..
T Consensus       142 ivHrDlkp~NIll~~~g~vkL~DFG~a~~  170 (353)
T 2i0e_A          142 IIYRDLKLDNVMLDSEGHIKIADFGMCKE  170 (353)
T ss_dssp             CBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             EEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence                    899999999999999999864

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.53  E-value=1.2e-14  Score=89.92  Aligned_cols=85  Identities=20%  Similarity=0.147  Sum_probs=72.6

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--c----cEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH--------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--Q----GLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~----~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~--------   76 (100)
                      ...+.+|+..++.++||||+++++.+.  .    ..++++||++ ++|.+++.... ++++..+..++.|++        
T Consensus        56 ~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~  134 (311)
T 3ork_A           56 YLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQ  134 (311)
T ss_dssp             HHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            456889999999999999999999987  2    3499999998 99999987654 389999888888866        


Q ss_pred             ----------hcccccCCCeEEEeecCCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                +||+++.++.+||+|||++..
T Consensus       135 ~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~  165 (311)
T 3ork_A          135 NGIIHRDVKPANIMISATNAVKVMDFGIARA  165 (311)
T ss_dssp             TTCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred             CCCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence                      899999999999999999853

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.53  E-value=6.2e-14  Score=87.22  Aligned_cols=86  Identities=24%  Similarity=0.336  Sum_probs=74.8

Q ss_pred             chhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC---------------CCCCHHHHHHH
Q 034245           11 VPSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK---------------DSMDGYSIKFS   71 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~---------------~~~~~~~~~~~   71 (100)
                      ....+.+|+.+++.+ +|||++++++.+.  +..++++||++ ++|.+++....               ..++...+..+
T Consensus        68 ~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  147 (327)
T 1fvr_A           68 DHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF  147 (327)
T ss_dssp             --CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHH
Confidence            456688999999999 8999999999998  88999999999 89999997653               24888888888


Q ss_pred             HHHhH------------------hcccccCCCeEEEeecCCCC
Q 034245           72 SSDSL------------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        72 ~~~~~------------------~nil~~~~~~~ki~dfgl~~   96 (100)
                      +.|++                  +||+++.++.+|++|||++.
T Consensus       148 ~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~  190 (327)
T 1fvr_A          148 AADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR  190 (327)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEE
T ss_pred             HHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccCcCc
Confidence            88866                  89999999999999999875

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.53  E-value=3.4e-14  Score=92.74  Aligned_cols=86  Identities=21%  Similarity=0.263  Sum_probs=74.6

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++||||+++++++.  ...++++||++ ++|.+.+.... .+++..+..++.|++           
T Consensus        64 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH~~~i  142 (486)
T 3mwu_A           64 DTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHNI  142 (486)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            3567889999999999999999999998  88999999999 99988886654 389999999988876           


Q ss_pred             -------hccccc---CCCeEEEeecCCCCC
Q 034245           77 -------RCCLLS---FGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~---~~~~~ki~dfgl~~~   97 (100)
                             +||++.   .++.+||+|||++..
T Consensus       143 vH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~  173 (486)
T 3mwu_A          143 VHRDLKPENILLESKEKDCDIKIIDFGLSTC  173 (486)
T ss_dssp             CCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred             EeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence                   899995   456899999999864

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.53  E-value=5.8e-14  Score=86.09  Aligned_cols=86  Identities=17%  Similarity=0.142  Sum_probs=75.5

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++|||++++++.+.  ...++++|+++ +++.+.+.... .++...+..++.|++           
T Consensus        58 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i  136 (294)
T 2rku_A           58 QREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNRV  136 (294)
T ss_dssp             HHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            3456889999999999999999999998  78999999999 99999887654 388999888888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+|++|||++..
T Consensus       137 ~H~dl~p~Nil~~~~~~~kl~dfg~~~~  164 (294)
T 2rku_A          137 IHRDLKLGNLFLNEDLEVKIGDFGLATK  164 (294)
T ss_dssp             ECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             cccCCChHhEEEcCCCCEEEEeccCcee
Confidence                   899999999999999998753

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.53  E-value=1e-13  Score=84.23  Aligned_cols=86  Identities=23%  Similarity=0.318  Sum_probs=75.6

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+..++.++|||++++++.+.  ...++++|+++ ++|.+++..... ++...+..++.|++           
T Consensus        54 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~i  132 (276)
T 2h6d_A           54 VVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR-VEEMEARRLFQQILSAVDYCHRHMV  132 (276)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred             HHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCCCcHHHHHhccCC-CCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            3456889999999999999999999988  88999999998 899999876543 88888888888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+|++|||++..
T Consensus       133 ~H~dl~p~Nil~~~~~~~~l~dfg~~~~  160 (276)
T 2h6d_A          133 VHRDLKPENVLLDAHMNAKIADFGLSNM  160 (276)
T ss_dssp             SCCCCCGGGEEECTTSCEEECCCCGGGC
T ss_pred             ccCCCChhhEEECCCCCEEEeecccccc
Confidence                   899999999999999998864

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.53  E-value=1.2e-13  Score=84.60  Aligned_cols=91  Identities=19%  Similarity=0.242  Sum_probs=74.0

Q ss_pred             CCCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCC--CCCHHHHHHHHHHhH-----
Q 034245            7 TMEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKD--SMDGYSIKFSSSDSL-----   76 (100)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~--~~~~~~~~~~~~~~~-----   76 (100)
                      .+......+.+|+.+++.++|||++++++.+.  +..++++|+++ ++|.+++.....  .++...+..++.|++     
T Consensus        58 ~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~  137 (295)
T 2clq_A           58 RDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKY  137 (295)
T ss_dssp             CCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHH
Confidence            34445677899999999999999999999998  88999999998 999999876532  256777777777765     


Q ss_pred             -------------hcccccC-CCeEEEeecCCCCC
Q 034245           77 -------------RCCLLSF-GKTVKVADLQALDW   97 (100)
Q Consensus        77 -------------~nil~~~-~~~~ki~dfgl~~~   97 (100)
                                   +||+++. ++.+|++|||++..
T Consensus       138 lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~  172 (295)
T 2clq_A          138 LHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKR  172 (295)
T ss_dssp             HHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEE
T ss_pred             HHhCCEEccCCChhhEEEECCCCCEEEeecccccc
Confidence                         8999987 89999999998753

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.53  E-value=7.1e-14  Score=85.34  Aligned_cols=84  Identities=21%  Similarity=0.283  Sum_probs=74.6

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  ...++++|+++ ++|.+.+..... ++...+..++.|++            
T Consensus        58 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~i~  136 (284)
T 2vgo_A           58 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCHERKVI  136 (284)
T ss_dssp             HHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred             HHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCce
Confidence            456889999999999999999999998  88999999999 899999876543 88888888888866            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +||+++.++.+|++|||++.
T Consensus       137 H~dl~p~Nil~~~~~~~kl~Dfg~~~  162 (284)
T 2vgo_A          137 HRDIKPENLLMGYKGELKIADFGWSV  162 (284)
T ss_dssp             CCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             ecCCCHHHEEEcCCCCEEEecccccc
Confidence                  89999999999999999874

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.53  E-value=5.7e-14  Score=85.58  Aligned_cols=85  Identities=25%  Similarity=0.252  Sum_probs=74.9

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  ...++++||++ +++.+.+..... ++...+..++.|++            
T Consensus        53 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~qi~~~l~~LH~~~i~  131 (279)
T 3fdn_A           53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVI  131 (279)
T ss_dssp             HHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHTTTCE
T ss_pred             HHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence            356889999999999999999999998  88999999999 999998876543 88888888888866            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +||+++.++.+|++|||++..
T Consensus       132 H~dlkp~Nili~~~~~~~l~Dfg~~~~  158 (279)
T 3fdn_A          132 HRDIKPENLLLGSAGELKIADFGWSVH  158 (279)
T ss_dssp             ECCCCGGGEEECTTSCEEECSCCEESC
T ss_pred             cccCChHhEEEcCCCCEEEEecccccc
Confidence                  899999999999999998754

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.53  E-value=6.4e-14  Score=88.14  Aligned_cols=85  Identities=22%  Similarity=0.304  Sum_probs=73.4

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee-------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS-------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~-------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      ..+.+|+.+++.++||||+++++.+.       ...++++||+++++.+.+......++...+..++.|++         
T Consensus        74 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~  153 (362)
T 3pg1_A           74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA  153 (362)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhCCCcCccceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            67889999999999999999999985       46899999999889888877665689999998888876         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               +||+++.++.+||+|||++..
T Consensus       154 ~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~  183 (362)
T 3pg1_A          154 GVVHRDLHPGNILLADNNDITICDFNLARE  183 (362)
T ss_dssp             TCCCCCCCGGGEEECTTCCEEECCTTC---
T ss_pred             cCEecCCChHHEEEcCCCCEEEEecCcccc
Confidence                     899999999999999999853

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.53  E-value=9.4e-14  Score=85.78  Aligned_cols=85  Identities=16%  Similarity=0.287  Sum_probs=75.3

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+..++.++|||++++++.+.  ...++++||++ ++|.+++......++...+..++.|++            
T Consensus        68 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~  147 (314)
T 3com_A           68 LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKI  147 (314)
T ss_dssp             CHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCc
Confidence            467899999999999999999999988  88999999999 899999875444589999888888866            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +||+++.++.+|++|||++.
T Consensus       148 H~dl~p~Nil~~~~~~~kl~dfg~~~  173 (314)
T 3com_A          148 HRDIKAGNILLNTEGHAKLADFGVAG  173 (314)
T ss_dssp             CCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             CCCcCHHHEEECCCCCEEEeecccch
Confidence                  89999999999999999884

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.53  E-value=4.7e-14  Score=87.28  Aligned_cols=85  Identities=15%  Similarity=0.080  Sum_probs=73.7

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+..++.++|||++++++.+.  +..++++|+++ ++|.+++.... +++...+..++.|++            
T Consensus        78 ~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i~  156 (309)
T 2h34_A           78 RTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAHAAGAT  156 (309)
T ss_dssp             HHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCcCC
Confidence            466889999999999999999999988  88999999999 89999987654 388888888888866            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +||+++.++.+|++|||++..
T Consensus       157 H~dlkp~NIl~~~~~~~kl~Dfg~~~~  183 (309)
T 2h34_A          157 HRDVKPENILVSADDFAYLVDFGIASA  183 (309)
T ss_dssp             CSCCCGGGEEECTTSCEEECSCCC---
T ss_pred             cCCCChHHEEEcCCCCEEEecCccCcc
Confidence                  899999999999999998754

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.53  E-value=5.2e-14  Score=86.37  Aligned_cols=88  Identities=34%  Similarity=0.446  Sum_probs=74.7

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCC-CCCCHHHHHHHHHHhH---------
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPK-DSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~---------   76 (100)
                      ......+.+|+..++.++|||++++++.+.  +..++++|++.+++.+++.... .+++...+..++.|++         
T Consensus        43 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~  122 (299)
T 2r3i_A           43 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH  122 (299)
T ss_dssp             --CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEcccCCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            334567889999999999999999999998  8899999999999999887653 3478888888887765         


Q ss_pred             ---------hcccccCCCeEEEeecCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~   96 (100)
                               +||+++.++.+|++|||++.
T Consensus       123 ~i~H~dlkp~Nili~~~~~~kl~dfg~~~  151 (299)
T 2r3i_A          123 RVLHRDLKPQNLLINTEGAIKLADFGLAR  151 (299)
T ss_dssp             TCCCCCCCGGGEEECTTSCEEECSTTHHH
T ss_pred             CccCCCCCHHHeEEcCCCCEEECcchhhh
Confidence                     89999999999999999763

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.53  E-value=3.1e-14  Score=88.30  Aligned_cols=89  Identities=24%  Similarity=0.315  Sum_probs=71.8

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee--cc------EEEEEeccc-ccHHHHhccCC-----CCCCHHHHHHHHHH
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS--QG------LCLFLEYQA-NDLAYLLKYPK-----DSMDGYSIKFSSSD   74 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~------~~lv~e~~~-~~l~~~l~~~~-----~~~~~~~~~~~~~~   74 (100)
                      ......+.+|+.+++.++|||++++++++.  ..      .++++||++ ++|.+++....     ..++...+..++.|
T Consensus        66 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~q  145 (323)
T 3qup_A           66 SSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVD  145 (323)
T ss_dssp             CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHH
Confidence            344567899999999999999999999987  22      389999999 89999885421     13788888888888


Q ss_pred             hH------------------hcccccCCCeEEEeecCCCCC
Q 034245           75 SL------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        75 ~~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      ++                  +||+++.++.+||+|||++..
T Consensus       146 i~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~  186 (323)
T 3qup_A          146 IACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRK  186 (323)
T ss_dssp             HHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC---
T ss_pred             HHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEeecccccc
Confidence            66                  899999999999999999854

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.53  E-value=1.1e-13  Score=84.00  Aligned_cols=85  Identities=20%  Similarity=0.219  Sum_probs=75.2

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++|||++++++.+.  ...++++|+++ ++|.+.+.... .++...+..++.|++           
T Consensus        48 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i  126 (276)
T 2yex_A           48 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLHGIGI  126 (276)
T ss_dssp             HHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             hhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            3467889999999999999999999988  78899999999 89999987654 388898888888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~   96 (100)
                             +||+++.++.+|++|||++.
T Consensus       127 ~H~dl~p~Nil~~~~~~~kl~dfg~~~  153 (276)
T 2yex_A          127 THRDIKPENLLLDERDNLKISDFGLAT  153 (276)
T ss_dssp             ECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             eccCCChHHEEEccCCCEEEeeCCCcc
Confidence                   89999999999999999875

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.52  E-value=3.6e-14  Score=86.71  Aligned_cols=88  Identities=25%  Similarity=0.259  Sum_probs=76.6

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      +....+.+|+..++.++|||++++++.+. ...++++|+++ ++|.+.+......++...+..++.|++           
T Consensus        63 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  142 (291)
T 1u46_A           63 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF  142 (291)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHHHhCCCCCcccEEEEEccCCceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            34567889999999999999999999998 77999999999 999999876544488888888888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+|++|||++..
T Consensus       143 ~H~dikp~Nili~~~~~~kl~Dfg~~~~  170 (291)
T 1u46_A          143 IHRDLAARNLLLATRDLVKIGDFGLMRA  170 (291)
T ss_dssp             ECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred             ccCCCchheEEEcCCCCEEEcccccccc
Confidence                   899999999999999998753

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.52  E-value=8.7e-14  Score=85.72  Aligned_cols=86  Identities=15%  Similarity=0.163  Sum_probs=73.5

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  ...++++|+++ ++|.+.+.... .++...+..++.|++            
T Consensus        50 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~  128 (304)
T 2jam_A           50 DSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLHENGIV  128 (304)
T ss_dssp             --HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             hHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            456889999999999999999999998  88999999999 89999887654 388888888888866            


Q ss_pred             ------hcccc---cCCCeEEEeecCCCCCC
Q 034245           77 ------RCCLL---SFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 ------~nil~---~~~~~~ki~dfgl~~~~   98 (100)
                            +||++   +.++.+|++|||++...
T Consensus       129 H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~  159 (304)
T 2jam_A          129 HRDLKPENLLYLTPEENSKIMITDFGLSKME  159 (304)
T ss_dssp             CCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred             ccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence                  89998   67889999999988643

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.52  E-value=1.1e-13  Score=85.90  Aligned_cols=86  Identities=21%  Similarity=0.279  Sum_probs=73.6

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEeccc-ccHHHHhccCCC--CCCHHHHHHHHHHhH--------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQA-NDLAYLLKYPKD--SMDGYSIKFSSSDSL--------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~-~~l~~~l~~~~~--~~~~~~~~~~~~~~~--------   76 (100)
                      ...+.+|+.+++.++|||++++++++.    ...++++||++ ++|.+++.....  .+++..+..++.|++        
T Consensus        51 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~  130 (319)
T 4euu_A           51 VDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE  130 (319)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            456789999999999999999999987    37899999999 999999876432  288899888888876        


Q ss_pred             ----------hcccc----cCCCeEEEeecCCCCC
Q 034245           77 ----------RCCLL----SFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------~nil~----~~~~~~ki~dfgl~~~   97 (100)
                                +||++    +..+.+||+|||++..
T Consensus       131 ~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~  165 (319)
T 4euu_A          131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE  165 (319)
T ss_dssp             TTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred             CCEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence                      89998    6778899999999853

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.52  E-value=1.3e-13  Score=91.41  Aligned_cols=86  Identities=17%  Similarity=0.227  Sum_probs=75.3

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC---CCCCHHHHHHHHHHhH---------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK---DSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~---~~~~~~~~~~~~~~~~---------   76 (100)
                      ...+.+|+.+++.++||||+++++.+.  ..+|+++||++ ++|...+....   ..+++..+..++.|++         
T Consensus       229 ~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~  308 (543)
T 3c4z_A          229 YQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR  308 (543)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc
Confidence            456889999999999999999999998  88999999999 99999887542   2488999888888866         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               +||+++.++.+||+|||++..
T Consensus       309 gIvHrDLKP~NILl~~~g~vkL~DFGla~~  338 (543)
T 3c4z_A          309 NIIYRDLKPENVLLDDDGNVRISDLGLAVE  338 (543)
T ss_dssp             TEECCCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             CCcccCCChHHEEEeCCCCEEEeecceeee
Confidence                     899999999999999999853

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.52  E-value=6.4e-14  Score=88.19  Aligned_cols=87  Identities=22%  Similarity=0.260  Sum_probs=72.6

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccC---CCCCCHHHHHHHHHHhH--------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYP---KDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~~~~~~~--------   76 (100)
                      ....+.+|+.+++.++||||+++++.+.  ...++++||++ ++|.+.+...   ...+++..+..++.|++        
T Consensus        69 ~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~  148 (351)
T 3c0i_A           69 STEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD  148 (351)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            3567899999999999999999999998  88999999999 9998776532   22378888888888866        


Q ss_pred             ----------hcccccCCC---eEEEeecCCCCC
Q 034245           77 ----------RCCLLSFGK---TVKVADLQALDW   97 (100)
Q Consensus        77 ----------~nil~~~~~---~~ki~dfgl~~~   97 (100)
                                +||+++.++   .+|++|||++..
T Consensus       149 ~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~  182 (351)
T 3c0i_A          149 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ  182 (351)
T ss_dssp             TTEECSCCSGGGEEECSSSTTCCEEECCCTTCEE
T ss_pred             CCceeccCChHHeEEecCCCCCcEEEecCcceeE
Confidence                      899997654   499999999853

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.52  E-value=7.8e-14  Score=86.24  Aligned_cols=88  Identities=19%  Similarity=0.180  Sum_probs=75.1

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee------ccEEEEEeccc-ccHHHHhcc---CCCCCCHHHHHHHHHHhH--
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS------QGLCLFLEYQA-NDLAYLLKY---PKDSMDGYSIKFSSSDSL--   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~------~~~~lv~e~~~-~~l~~~l~~---~~~~~~~~~~~~~~~~~~--   76 (100)
                      ......+.+|+.+++.++|||++++++.+.      ...++++||++ ++|.+++..   ....+++..+..++.|++  
T Consensus        67 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~  146 (317)
T 2buj_A           67 QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRG  146 (317)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence            344567889999999999999999999885      47899999999 899988865   234589999988888866  


Q ss_pred             ----------------hcccccCCCeEEEeecCCCC
Q 034245           77 ----------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ----------------~nil~~~~~~~ki~dfgl~~   96 (100)
                                      +||+++.++.+|++|||++.
T Consensus       147 L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~  182 (317)
T 2buj_A          147 LEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMN  182 (317)
T ss_dssp             HHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCE
T ss_pred             HHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcch
Confidence                            89999999999999999764

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.52  E-value=9.5e-14  Score=86.65  Aligned_cols=85  Identities=21%  Similarity=0.299  Sum_probs=73.9

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCC---------------CCCHHHHHHHH
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKD---------------SMDGYSIKFSS   72 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~---------------~~~~~~~~~~~   72 (100)
                      ...+.+|+.+++.+ +|||++++++.+.  +..++++||++ ++|.+++.....               .++...+..++
T Consensus        84 ~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  163 (334)
T 2pvf_A           84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT  163 (334)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHH
Confidence            45688999999999 8999999999998  88999999999 899999876431               27788888888


Q ss_pred             HHhH------------------hcccccCCCeEEEeecCCCC
Q 034245           73 SDSL------------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        73 ~~~~------------------~nil~~~~~~~ki~dfgl~~   96 (100)
                      .|++                  +||+++.++.+||+|||++.
T Consensus       164 ~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~  205 (334)
T 2pvf_A          164 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR  205 (334)
T ss_dssp             HHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             HHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEccccccc
Confidence            7765                  89999999999999999885

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.52  E-value=8.9e-14  Score=90.62  Aligned_cols=86  Identities=23%  Similarity=0.242  Sum_probs=75.3

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      .....+.+|+.+++.++||||+++++++.  ...++++|++. ++|.+.+..... +++..+..++.|++          
T Consensus        68 ~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~  146 (484)
T 3nyv_A           68 TDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYMHKNK  146 (484)
T ss_dssp             SCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSC-CBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34567899999999999999999999999  88999999999 999998876654 89999998988876          


Q ss_pred             --------hcccc---cCCCeEEEeecCCCC
Q 034245           77 --------RCCLL---SFGKTVKVADLQALD   96 (100)
Q Consensus        77 --------~nil~---~~~~~~ki~dfgl~~   96 (100)
                              +||++   ..++.+||+|||++.
T Consensus       147 ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~  177 (484)
T 3nyv_A          147 IVHRDLKPENLLLESKSKDANIRIIDFGLST  177 (484)
T ss_dssp             CCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred             eeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence                    89999   467899999999874

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.52  E-value=1.4e-13  Score=84.72  Aligned_cols=88  Identities=20%  Similarity=0.230  Sum_probs=75.5

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccC--CCCCCHHHHHHHHHHhH-------
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYP--KDSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~~~~~~~-------   76 (100)
                      ++....+.+|+.+++.++|||++++++++.  ...++++|+++ ++|.+++...  ..++++..+..++.|++       
T Consensus        71 ~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH  150 (307)
T 2nru_A           71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH  150 (307)
T ss_dssp             TTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence            344567899999999999999999999998  88999999998 9999988643  23488888888887765       


Q ss_pred             -----------hcccccCCCeEEEeecCCCC
Q 034245           77 -----------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -----------~nil~~~~~~~ki~dfgl~~   96 (100)
                                 +||+++.++.+|++|||++.
T Consensus       151 ~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~  181 (307)
T 2nru_A          151 ENHHIHRDIKSANILLDEAFTAKISDFGLAR  181 (307)
T ss_dssp             HTTEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             cCCeecCCCCHHHEEEcCCCcEEEeeccccc
Confidence                       89999999999999999875

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.52  E-value=6.8e-14  Score=88.07  Aligned_cols=85  Identities=21%  Similarity=0.241  Sum_probs=66.9

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  ...++++||++ ++|.+.+..... +++..+..++.|++            
T Consensus        92 ~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~~L~~LH~~~iv  170 (349)
T 2w4o_A           92 KKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY-YSERDAADAVKQILEAVAYLHENGIV  170 (349)
T ss_dssp             -------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSS-CCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence            356788999999999999999999998  88999999999 999999877553 89999888888876            


Q ss_pred             ------hcccccC---CCeEEEeecCCCCC
Q 034245           77 ------RCCLLSF---GKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~---~~~~ki~dfgl~~~   97 (100)
                            +||++..   ++.+||+|||++..
T Consensus       171 H~Dikp~NIll~~~~~~~~~kl~Dfg~a~~  200 (349)
T 2w4o_A          171 HRDLKPENLLYATPAPDAPLKIADFGLSKI  200 (349)
T ss_dssp             CCCCCGGGEEESSSSTTCCEEECCCC----
T ss_pred             ecCCCcccEEEecCCCCCCEEEccCccccc
Confidence                  8999975   88999999999864

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.52  E-value=5.9e-14  Score=87.31  Aligned_cols=83  Identities=19%  Similarity=0.160  Sum_probs=70.7

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--c----cEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH--------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--Q----GLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~----~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~--------   76 (100)
                      .....+|+..++.++||||+++++.+.  .    .+++++||++ ++|.+++....  +++..+..++.|++        
T Consensus        62 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~al~~LH~  139 (322)
T 3soc_A           62 SWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANV--VSWNELCHIAETMARGLAYLHE  139 (322)
T ss_dssp             HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHh
Confidence            345667888899999999999999988  2    3699999999 89999997653  88888888877764        


Q ss_pred             --------------------hcccccCCCeEEEeecCCCC
Q 034245           77 --------------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 --------------------~nil~~~~~~~ki~dfgl~~   96 (100)
                                          +||+++.++.+||+|||++.
T Consensus       140 ~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~  179 (322)
T 3soc_A          140 DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLAL  179 (322)
T ss_dssp             CEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             hccccccccCCCEEeCCCChHhEEECCCCeEEEccCCccc
Confidence                                78999999999999999984

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.52  E-value=5.5e-14  Score=88.23  Aligned_cols=86  Identities=20%  Similarity=0.268  Sum_probs=73.1

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee---ccEEEEEeccc-ccHHHHhccCCC-------------------------
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS---QGLCLFLEYQA-NDLAYLLKYPKD-------------------------   61 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~---~~~~lv~e~~~-~~l~~~l~~~~~-------------------------   61 (100)
                      ...+.+|+.++..+ +||||+++++.+.   ...++++||++ ++|.+++.....                         
T Consensus        69 ~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (359)
T 3vhe_A           69 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVD  148 (359)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------
T ss_pred             HHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchh
Confidence            35689999999999 7999999999988   45899999999 999999876432                         


Q ss_pred             ----------------------------------------CCCHHHHHHHHHHhH------------------hcccccC
Q 034245           62 ----------------------------------------SMDGYSIKFSSSDSL------------------RCCLLSF   83 (100)
Q Consensus        62 ----------------------------------------~~~~~~~~~~~~~~~------------------~nil~~~   83 (100)
                                                              .+++..+..++.|++                  +||+++.
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~  228 (359)
T 3vhe_A          149 LKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE  228 (359)
T ss_dssp             -----------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG
T ss_pred             hhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcC
Confidence                                                    167777888887766                  8999999


Q ss_pred             CCeEEEeecCCCCC
Q 034245           84 GKTVKVADLQALDW   97 (100)
Q Consensus        84 ~~~~ki~dfgl~~~   97 (100)
                      ++.+||+|||++..
T Consensus       229 ~~~~kl~Dfg~a~~  242 (359)
T 3vhe_A          229 KNVVKICDFGLARD  242 (359)
T ss_dssp             GGCEEECCCGGGSC
T ss_pred             CCcEEEEeccceee
Confidence            99999999999864

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.52  E-value=1.1e-13  Score=88.04  Aligned_cols=84  Identities=25%  Similarity=0.359  Sum_probs=73.3

Q ss_pred             chhhHHHHHHHHhhCC-CCcceeeeeeee----ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245           11 VPSSMIREVSCLMELN-HPNIIRLMLVVS----QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~-h~~iv~l~~~~~----~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      ....+.+|+..++.+. ||||+++++++.    ..+|+++||++++|...+...  .++...+..++.|++         
T Consensus        51 ~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~  128 (388)
T 3oz6_A           51 DAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHSG  128 (388)
T ss_dssp             HHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCSEEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccCcCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC
Confidence            3456789999999997 999999999987    468999999999999988764  388888888888866         


Q ss_pred             ---------hcccccCCCeEEEeecCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~   96 (100)
                               +||+++.++.+||+|||++.
T Consensus       129 ~ivHrDlkp~NIll~~~~~~kl~DFG~a~  157 (388)
T 3oz6_A          129 GLLHRDMKPSNILLNAECHVKVADFGLSR  157 (388)
T ss_dssp             TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             CEEeCCCCHHHeEEcCCCCEEecCCcccc
Confidence                     89999999999999999985

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.52  E-value=2.4e-14  Score=92.60  Aligned_cols=85  Identities=18%  Similarity=0.314  Sum_probs=67.5

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  +.+++++||++ ++|...+.... .++...+..++.|++            
T Consensus       192 ~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~gi  270 (446)
T 4ejn_A          192 VAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEKNV  270 (446)
T ss_dssp             ---------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcCCE
Confidence            456788999999999999999999998  88999999999 89999887654 388888888877765            


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+||+|||++..
T Consensus       271 iHrDlkp~NIll~~~~~~kl~DFG~a~~  298 (446)
T 4ejn_A          271 VYRDLKLENLMLDKDGHIKITDFGLCKE  298 (446)
T ss_dssp             CCCCCCGGGEEECSSSCEEECCCCCCCT
T ss_pred             EECCCCHHHEEECCCCCEEEccCCCcee
Confidence                   899999999999999999864

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.51  E-value=5.1e-14  Score=88.58  Aligned_cols=85  Identities=19%  Similarity=0.233  Sum_probs=73.9

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++|||++++++.+.  +..++++||++ ++|.+++..... ++...+..++.|++           
T Consensus        74 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~i~~~i~~~l~~lh~~~~  152 (360)
T 3eqc_A           74 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKHK  152 (360)
T ss_dssp             HHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            3467889999999999999999999988  88999999999 899999876543 88888777776654           


Q ss_pred             --------hcccccCCCeEEEeecCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~   96 (100)
                              +||+++.++.+||+|||++.
T Consensus       153 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  180 (360)
T 3eqc_A          153 IMHRDVKPSNILVNSRGEIKLCDFGVSG  180 (360)
T ss_dssp             CCCSCCSGGGEEECTTCCEEECCCCCCH
T ss_pred             EEcCCccHHHEEECCCCCEEEEECCCCc
Confidence                    89999999999999999874

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.51  E-value=1.6e-13  Score=85.17  Aligned_cols=85  Identities=24%  Similarity=0.211  Sum_probs=74.8

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  ...++++||++ ++|.+++.... +++...+..++.|++            
T Consensus        59 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~iv  137 (321)
T 2a2a_A           59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLHTKKIA  137 (321)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCS-CEEHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            466899999999999999999999998  88999999998 99999997654 488888888888866            


Q ss_pred             ------hcccccCCC----eEEEeecCCCCC
Q 034245           77 ------RCCLLSFGK----TVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~----~~ki~dfgl~~~   97 (100)
                            +||++..++    .+|++|||++..
T Consensus       138 H~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~  168 (321)
T 2a2a_A          138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHE  168 (321)
T ss_dssp             CCCCSGGGEEESCTTSSSCCEEECCCTTCEE
T ss_pred             cCCCChHHEEEecCCCCcCCEEEccCcccee
Confidence                  899998777    799999998853

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.51  E-value=7.1e-14  Score=86.59  Aligned_cols=85  Identities=24%  Similarity=0.307  Sum_probs=73.3

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC---------CCCCHHHHHHHHHHhH---
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK---------DSMDGYSIKFSSSDSL---   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~---------~~~~~~~~~~~~~~~~---   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  ...++++|+++ ++|.+++....         .+++...+..++.|++   
T Consensus        72 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l  151 (322)
T 1p4o_A           72 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM  151 (322)
T ss_dssp             HHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHH
Confidence            346889999999999999999999998  88999999999 89999986521         2367888888887765   


Q ss_pred             ---------------hcccccCCCeEEEeecCCCC
Q 034245           77 ---------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ---------------~nil~~~~~~~ki~dfgl~~   96 (100)
                                     +||+++.++.+|++|||++.
T Consensus       152 ~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~  186 (322)
T 1p4o_A          152 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR  186 (322)
T ss_dssp             HHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCC
T ss_pred             HHHHHCCCccCCCccceEEEcCCCeEEECcCcccc
Confidence                           89999999999999999885

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.51  E-value=7.6e-14  Score=90.90  Aligned_cols=84  Identities=21%  Similarity=0.282  Sum_probs=71.0

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~------   76 (100)
                      ....+.+|+.+++.++||||+++++++.        ..+|+++||+++++.+.+..   .++...+..++.|++      
T Consensus       104 ~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~~l~~~~~~---~l~~~~~~~~~~qil~aL~~l  180 (464)
T 3ttj_A          104 HAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHL  180 (464)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTS---CCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEEeCCCCCHHHHHhh---cCCHHHHHHHHHHHHHHHHHH
Confidence            3567889999999999999999999986        34699999999777777754   288888888888876      


Q ss_pred             ------------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                  +||+++.++.+||+|||++..
T Consensus       181 H~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~  213 (464)
T 3ttj_A          181 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLART  213 (464)
T ss_dssp             HHTTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred             HHCCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence                        899999999999999999864

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.51  E-value=8.5e-14  Score=85.21  Aligned_cols=87  Identities=23%  Similarity=0.215  Sum_probs=73.4

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee------ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS------QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~------~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------   76 (100)
                      .....+.+|+.+++.++|||++++++.+.      ...++++||++ ++|.+++..... ++...+..++.|++      
T Consensus        67 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~l  145 (290)
T 1t4h_A           67 SERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKV-MKIKVLRSWCRQILKGLQFL  145 (290)
T ss_dssp             HHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHccC-CCHHHHHHHHHHHHHHHHHH
Confidence            34566889999999999999999999876      44899999998 899999976543 88888888887765      


Q ss_pred             --------------hccccc-CCCeEEEeecCCCCC
Q 034245           77 --------------RCCLLS-FGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------------~nil~~-~~~~~ki~dfgl~~~   97 (100)
                                    +||+++ .++.+|++|||++..
T Consensus       146 H~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~  181 (290)
T 1t4h_A          146 HTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL  181 (290)
T ss_dssp             HTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred             HcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence                          788997 789999999998853

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.51  E-value=2.1e-13  Score=83.07  Aligned_cols=85  Identities=25%  Similarity=0.270  Sum_probs=74.5

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  ...++++|+++ ++|.+++.... +++...+..++.|++            
T Consensus        52 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~  130 (283)
T 3bhy_A           52 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLHSKRIA  130 (283)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            567899999999999999999999998  88999999998 99999987644 389999888888866            


Q ss_pred             ------hcccccCCC----eEEEeecCCCCC
Q 034245           77 ------RCCLLSFGK----TVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~----~~ki~dfgl~~~   97 (100)
                            +||++..++    .+|++|||++..
T Consensus       131 H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~  161 (283)
T 3bhy_A          131 HFDLKPENIMLLDKNVPNPRIKLIDFGIAHK  161 (283)
T ss_dssp             CSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             CCCCChHHEEEecCCCCCCceEEEeccccee
Confidence                  899998766    899999998853

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.51  E-value=1.5e-13  Score=84.88  Aligned_cols=87  Identities=26%  Similarity=0.351  Sum_probs=72.3

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--c-----cEEEEEeccc-ccHHHHhcc-----CCCCCCHHHHHHHHHHhH-
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--Q-----GLCLFLEYQA-NDLAYLLKY-----PKDSMDGYSIKFSSSDSL-   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~-----~~~lv~e~~~-~~l~~~l~~-----~~~~~~~~~~~~~~~~~~-   76 (100)
                      ....+.+|+..++.++|||++++++++.  .     ..++++||++ ++|.+++..     ....++...+..++.|++ 
T Consensus        79 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~  158 (313)
T 3brb_A           79 EIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIAL  158 (313)
T ss_dssp             HHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHH
Confidence            3456889999999999999999999987  2     4599999999 899998842     223488999988888876 


Q ss_pred             -----------------hcccccCCCeEEEeecCCCCC
Q 034245           77 -----------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                       +||+++.++.+||+|||++..
T Consensus       159 aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~  196 (313)
T 3brb_A          159 GMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKK  196 (313)
T ss_dssp             HHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC--
T ss_pred             HHHHHHhCCcccCCCCcceEEEcCCCcEEEeecCccee
Confidence                             899999999999999999854

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.51  E-value=3e-13  Score=83.20  Aligned_cols=85  Identities=21%  Similarity=0.237  Sum_probs=75.2

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      .....+.+|+.+++.++|||++++++.+.  ...++++||++ ++|.+++...  +++...+..++.|++          
T Consensus        62 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~  139 (303)
T 3a7i_A           62 DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLHSEK  139 (303)
T ss_dssp             TTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34567899999999999999999999988  88999999999 8999988753  488899888888866          


Q ss_pred             --------hcccccCCCeEEEeecCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~   96 (100)
                              +||+++.++.+|++|||++.
T Consensus       140 i~H~dl~p~Nil~~~~~~~kl~Dfg~~~  167 (303)
T 3a7i_A          140 KIHRDIKAANVLLSEHGEVKLADFGVAG  167 (303)
T ss_dssp             EECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             CccCCCChheEEECCCCCEEEeecccce
Confidence                    89999999999999999874

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.51  E-value=1.8e-13  Score=85.42  Aligned_cols=84  Identities=19%  Similarity=0.244  Sum_probs=72.7

Q ss_pred             hhhHHHHHHHHhhCC-CCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMELN-HPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~-h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+.+|+..++.+. ||||+++++++.  ...++++||++ ++|.+.+.... ++++..+..++.|++           
T Consensus        49 ~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~i  127 (325)
T 3kn6_A           49 EANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKK-HFSETEASYIMRKLVSAVSHMHDVGV  127 (325)
T ss_dssp             HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             hhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            356789999999996 999999999999  88999999999 89999998765 489999999988876           


Q ss_pred             -------hcccccCCC---eEEEeecCCCC
Q 034245           77 -------RCCLLSFGK---TVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~~---~~ki~dfgl~~   96 (100)
                             +||++..++   .+||+|||++.
T Consensus       128 vH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~  157 (325)
T 3kn6_A          128 VHRDLKPENLLFTDENDNLEIKIIDFGFAR  157 (325)
T ss_dssp             ECCCCCGGGEEEEC----CEEEECCCTTCE
T ss_pred             eecCCCHHHEEEecCCCcccEEEeccccce
Confidence                   899997655   89999999985

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.51  E-value=7.4e-14  Score=88.46  Aligned_cols=85  Identities=21%  Similarity=0.287  Sum_probs=73.7

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee-c-------cEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS-Q-------GLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~-------~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~------   76 (100)
                      ....+.+|+.+++.++||||+++++++. .       ..|+++|++.++|.+++...  .++...+..++.|++      
T Consensus        67 ~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~L  144 (367)
T 1cm8_A           67 FAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYI  144 (367)
T ss_dssp             HHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEecCCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH
Confidence            3456889999999999999999999987 2       35999999998999988763  389999888888876      


Q ss_pred             ------------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                  +||+++.++.+||+|||++..
T Consensus       145 H~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~  177 (367)
T 1cm8_A          145 HAAGIIHRDLKPGNLAVNEDCELKILDFGLARQ  177 (367)
T ss_dssp             HHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             HHCCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence                        899999999999999999864

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.50  E-value=1.8e-13  Score=84.97  Aligned_cols=85  Identities=22%  Similarity=0.256  Sum_probs=72.3

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ...+.+|+.+++.++|||++++++.+. ...++++||++ ++|.+.+.... .++...+..++.|++             
T Consensus        59 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivH  137 (322)
T 2ycf_A           59 ALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLHENGIIH  137 (322)
T ss_dssp             --CHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTEETHHHHSTTC-CCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             hhhHHHHHHHHHhCCCCCCceEeeEEcCCceEEEEecCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence            346889999999999999999999998 77999999999 89999887654 389988888888866             


Q ss_pred             -----hcccccCCC---eEEEeecCCCCC
Q 034245           77 -----RCCLLSFGK---TVKVADLQALDW   97 (100)
Q Consensus        77 -----~nil~~~~~---~~ki~dfgl~~~   97 (100)
                           +||+++.++   .+||+|||++..
T Consensus       138 ~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~  166 (322)
T 2ycf_A          138 RDLKPENVLLSSQEEDCLIKITDFGHSKI  166 (322)
T ss_dssp             CCCSGGGEEESSSSSSCCEEECCCTTCEE
T ss_pred             cCCCHHHEEEecCCCCCeEEEccCcccee
Confidence                 899998655   499999998854

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.50  E-value=1.7e-13  Score=83.86  Aligned_cols=87  Identities=17%  Similarity=0.245  Sum_probs=73.7

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccC---CCCCCHHHHHHHHHHhH--------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYP---KDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~~~~~~~--------   76 (100)
                      ....+.+|+.+++.++|||++++++.+.  ...++++||++ ++|.+.+...   ...++...+..++.|++        
T Consensus        63 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~  142 (285)
T 3is5_A           63 PMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS  142 (285)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            3467889999999999999999999998  88999999999 8998887542   23488888888888866        


Q ss_pred             ----------hcccc---cCCCeEEEeecCCCCC
Q 034245           77 ----------RCCLL---SFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------~nil~---~~~~~~ki~dfgl~~~   97 (100)
                                +||++   +.++.+||+|||++..
T Consensus       143 ~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~  176 (285)
T 3is5_A          143 QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL  176 (285)
T ss_dssp             TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC
T ss_pred             CCEEECCCCHHHEEEecCCCCCCEEEEeeeccee
Confidence                      89999   4567899999999864

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.50  E-value=7.7e-14  Score=85.43  Aligned_cols=86  Identities=20%  Similarity=0.178  Sum_probs=73.4

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee---------------ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHh
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS---------------QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDS   75 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~---------------~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~   75 (100)
                      ...+.+|+.+++.++|||++++++.+.               ...++++||++ ++|.+++......++...+..++.|+
T Consensus        46 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi  125 (303)
T 1zy4_A           46 LSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQI  125 (303)
T ss_dssp             HHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHH
Confidence            456889999999999999999998763               46799999999 89999998655447778888787776


Q ss_pred             H------------------hcccccCCCeEEEeecCCCCC
Q 034245           76 L------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        76 ~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      +                  +||+++.++.+|++|||++..
T Consensus       126 ~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~  165 (303)
T 1zy4_A          126 LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKN  165 (303)
T ss_dssp             HHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSC
T ss_pred             HHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchhh
Confidence            5                  899999999999999998864

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.50  E-value=2e-13  Score=84.27  Aligned_cols=88  Identities=23%  Similarity=0.300  Sum_probs=71.8

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhcc---CCCCCCHHHHHHHHHHhH-------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKY---PKDSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~---~~~~~~~~~~~~~~~~~~-------   76 (100)
                      .....+.+|+..++.++|||++++++.+.  +..++++|+++ ++|.+++..   ....++...+..++.|++       
T Consensus        74 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH  153 (310)
T 2wqm_A           74 KARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH  153 (310)
T ss_dssp             HHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh
Confidence            34567889999999999999999999998  88999999999 899988864   233488888888888866       


Q ss_pred             -----------hcccccCCCeEEEeecCCCCC
Q 034245           77 -----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                 +||+++.++.+|++|||++..
T Consensus       154 ~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~  185 (310)
T 2wqm_A          154 SRRVMHRDIKPANVFITATGVVKLGDLGLGRF  185 (310)
T ss_dssp             HTTCCCCCCCGGGEEECTTSCEEECCC-----
T ss_pred             hCCeeCCCCcHHHEEEcCCCCEEEEeccceee
Confidence                       899999999999999998753

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.50  E-value=1.6e-13  Score=86.89  Aligned_cols=84  Identities=19%  Similarity=0.269  Sum_probs=70.6

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--c------cEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--Q------GLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~------~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~------   76 (100)
                      ....+.+|+.+++.++|||++++++++.  .      ..++++||+++++.+.+..   .++...+..++.|++      
T Consensus        67 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~al~~l  143 (371)
T 2xrw_A           67 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHL  143 (371)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEECCSEEHHHHHHS---CCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEEEcCCCCHHHHHhh---ccCHHHHHHHHHHHHHHHHHH
Confidence            3456889999999999999999999987  2      6899999999888888763   378888888888866      


Q ss_pred             ------------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                  +||+++.++.+||+|||++..
T Consensus       144 H~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~  176 (371)
T 2xrw_A          144 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLART  176 (371)
T ss_dssp             HHTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred             HHCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence                        899999999999999999864

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.50  E-value=1.7e-14  Score=89.26  Aligned_cols=90  Identities=14%  Similarity=0.179  Sum_probs=75.1

Q ss_pred             CCCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------
Q 034245            7 TMEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------   76 (100)
                      ..+.....+.+|+..++.++|||++++++.+.  ...++++||++ ++|.+++......++...+..++.|++       
T Consensus        68 ~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH  147 (319)
T 2y4i_B           68 DNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH  147 (319)
T ss_dssp             CCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            34445567889999999999999999999998  78999999999 999999987665588888888888866       


Q ss_pred             -----------hcccccCCCeEEEeecCCCCC
Q 034245           77 -----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                 +||+++ ++.+|++|||++..
T Consensus       148 ~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~  178 (319)
T 2y4i_B          148 AKGILHKDLKSKNVFYD-NGKVVITDFGLFSI  178 (319)
T ss_dssp             HTTCCCCCCCSTTEEEC---CCEECCCSCCC-
T ss_pred             hCCccccCCChhhEEEe-CCCEEEeecCCccc
Confidence                       899997 68999999998654

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.50  E-value=1.2e-13  Score=84.23  Aligned_cols=85  Identities=21%  Similarity=0.159  Sum_probs=72.5

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++|||++++++.+.  ...++++|+++ +++.+.+.... .++...+..++.|++           
T Consensus        48 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i  126 (284)
T 3kk8_A           48 DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSNGI  126 (284)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            3456889999999999999999999998  78899999999 89988876654 388889888888866           


Q ss_pred             -------hcccccCCC---eEEEeecCCCC
Q 034245           77 -------RCCLLSFGK---TVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~~---~~ki~dfgl~~   96 (100)
                             +||+++.++   .+|++|||++.
T Consensus       127 ~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~  156 (284)
T 3kk8_A          127 VHRNLKPENLLLASKAKGAAVKLADFGLAI  156 (284)
T ss_dssp             ECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred             CcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence                   899997655   49999999884

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.50  E-value=4.9e-14  Score=89.24  Aligned_cols=85  Identities=25%  Similarity=0.339  Sum_probs=71.7

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC------CCCCHHHHHHHHHHhH------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK------DSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~------~~~~~~~~~~~~~~~~------   76 (100)
                      ...+.+|+.+++.++||||+++++.+.  ...++++||++ ++|.+++....      ..++...+..++.|++      
T Consensus       118 ~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L  197 (367)
T 3l9p_A          118 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL  197 (367)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHH
Confidence            346889999999999999999999998  78899999998 89999987532      2378888888888865      


Q ss_pred             ------------hcccccCCC---eEEEeecCCCC
Q 034245           77 ------------RCCLLSFGK---TVKVADLQALD   96 (100)
Q Consensus        77 ------------~nil~~~~~---~~ki~dfgl~~   96 (100)
                                  +||+++.++   .+||+|||++.
T Consensus       198 H~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~  232 (367)
T 3l9p_A          198 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR  232 (367)
T ss_dssp             HHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHH
T ss_pred             HhCCeeCCCCChhhEEEecCCCCceEEECCCcccc
Confidence                        899998544   59999999874

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.49  E-value=4.6e-14  Score=87.87  Aligned_cols=87  Identities=22%  Similarity=0.305  Sum_probs=74.4

Q ss_pred             chhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccC-------------CCCCCHHHHHHHHH
Q 034245           11 VPSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYP-------------KDSMDGYSIKFSSS   73 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~-------------~~~~~~~~~~~~~~   73 (100)
                      ....+.+|+.+++.+ +|||++++++.+.  +..++++||++ ++|.+++...             ...++...+..++.
T Consensus        92 ~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (333)
T 2i1m_A           92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSS  171 (333)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHH
Confidence            345688999999999 8999999999998  88999999999 8999998642             12368888888888


Q ss_pred             HhH------------------hcccccCCCeEEEeecCCCCC
Q 034245           74 DSL------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        74 ~~~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      |++                  +||+++.++.+||+|||++..
T Consensus       172 qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~  213 (333)
T 2i1m_A          172 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD  213 (333)
T ss_dssp             HHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGCC
T ss_pred             HHHHHHHHHhcCCcccCCcccceEEECCCCeEEECccccccc
Confidence            866                  899999999999999999863

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.49  E-value=5.2e-14  Score=89.53  Aligned_cols=85  Identities=18%  Similarity=0.274  Sum_probs=66.7

Q ss_pred             hhhHHHHHHH-HhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSC-LMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~-l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+.+|... ++.++||||+++++.+.  ..+|+++||++ ++|...+..... +++..+..++.|++           
T Consensus        82 ~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~gi  160 (373)
T 2r5t_A           82 EKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERC-FLEPRARFYAAEIASALGYLHSLNI  160 (373)
T ss_dssp             ---------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            3456677775 56789999999999998  88999999999 899999876543 88888888888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+||+|||++..
T Consensus       161 vHrDlkp~NIll~~~g~ikL~DFG~a~~  188 (373)
T 2r5t_A          161 VYRDLKPENILLDSQGHIVLTDFGLCKE  188 (373)
T ss_dssp             CCCCCCGGGEEECTTSCEEECCCCBCGG
T ss_pred             eecCCCHHHEEECCCCCEEEeeCccccc
Confidence                   899999999999999998853

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.49  E-value=2.9e-13  Score=83.48  Aligned_cols=88  Identities=17%  Similarity=0.267  Sum_probs=73.6

Q ss_pred             CCcchhhHHHHHHHHhhCCCCcceeeeeeee----------------ccEEEEEecccccHHHHhccCCCCCCHHHHHHH
Q 034245            8 MEEVPSSMIREVSCLMELNHPNIIRLMLVVS----------------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFS   71 (100)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~----------------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~   71 (100)
                      +......+.+|+.+++.++|||++++++++.                ...++++||++++|.+.+...  +++...+..+
T Consensus        48 ~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~  125 (320)
T 2i6l_A           48 DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQG--PLLEEHARLF  125 (320)
T ss_dssp             SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCSEEHHHHHTTC--CCCHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccCceeEEeeccCCCHHHHhhcC--CccHHHHHHH
Confidence            3344567889999999999999999998762                568999999999999988653  3888888888


Q ss_pred             HHHhH------------------hccccc-CCCeEEEeecCCCCC
Q 034245           72 SSDSL------------------RCCLLS-FGKTVKVADLQALDW   97 (100)
Q Consensus        72 ~~~~~------------------~nil~~-~~~~~ki~dfgl~~~   97 (100)
                      +.|++                  +||+++ .++.+|++|||++..
T Consensus       126 ~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~  170 (320)
T 2i6l_A          126 MYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARI  170 (320)
T ss_dssp             HHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBC
T ss_pred             HHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccccc
Confidence            88866                  899997 567999999999864

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.49  E-value=3.9e-13  Score=82.12  Aligned_cols=86  Identities=23%  Similarity=0.186  Sum_probs=72.8

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeeeccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVSQGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------------   76 (100)
                      ..+.+|+.+++.++|||++++++.+....++++||++ ++|.+.+.....++++..+..++.|++               
T Consensus        68 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH  147 (287)
T 4f0f_A           68 QEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVH  147 (287)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCEEEEETTTTEEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBC
T ss_pred             HHHHHHHHHHHhCCCCCchhhheeecCCCeEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeec
Confidence            5788999999999999999999988833479999999 999998877665689998888888865               


Q ss_pred             -----hcccccCCCe-----EEEeecCCCCCC
Q 034245           77 -----RCCLLSFGKT-----VKVADLQALDWP   98 (100)
Q Consensus        77 -----~nil~~~~~~-----~ki~dfgl~~~~   98 (100)
                           +||+++.++.     +|++|||++...
T Consensus       148 ~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~  179 (287)
T 4f0f_A          148 RDLRSPNIFLQSLDENAPVCAKVADFGLSQQS  179 (287)
T ss_dssp             SCCSGGGEEESCCCTTCSCCEEECCCTTCBCC
T ss_pred             CCCCcceEEEeccCCCCceeEEeCCCCccccc
Confidence                 7889977665     999999998643

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.49  E-value=3e-13  Score=86.43  Aligned_cols=86  Identities=28%  Similarity=0.341  Sum_probs=71.3

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEecccccHHHHhccC--------CCCCCHHHHHHHHHHhH---
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQANDLAYLLKYP--------KDSMDGYSIKFSSSDSL---   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~~~l~~~l~~~--------~~~~~~~~~~~~~~~~~---   76 (100)
                      ...+.+|+.+++.++||||+++++++.    ...++++||+.+++.+.+...        ...+++..+..++.|++   
T Consensus        62 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al  141 (405)
T 3rgf_A           62 SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGI  141 (405)
T ss_dssp             CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHH
Confidence            457889999999999999999999985    779999999998888877522        11378888888888876   


Q ss_pred             ---------------hcccc----cCCCeEEEeecCCCCC
Q 034245           77 ---------------RCCLL----SFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------------~nil~----~~~~~~ki~dfgl~~~   97 (100)
                                     +||++    ...+.+||+|||++..
T Consensus       142 ~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~  181 (405)
T 3rgf_A          142 HYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL  181 (405)
T ss_dssp             HHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC-
T ss_pred             HHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCcee
Confidence                           89999    6678999999999864

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.49  E-value=9.4e-14  Score=86.04  Aligned_cols=85  Identities=20%  Similarity=0.088  Sum_probs=71.6

Q ss_pred             hhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           13 SSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ....+|+..+..+ +|||++++.+.+.  +..++++|++.+++.+.+......+++..+..++.|++             
T Consensus       101 ~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH  180 (311)
T 3p1a_A          101 ARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVH  180 (311)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEeccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEec
Confidence            3455666655554 9999999999998  88999999999889888876655699999998888876             


Q ss_pred             -----hcccccCCCeEEEeecCCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~~   97 (100)
                           +||+++.++.+||+|||++..
T Consensus       181 ~Dikp~NIll~~~~~~kl~DFG~a~~  206 (311)
T 3p1a_A          181 LDVKPANIFLGPRGRCKLGDFGLLVE  206 (311)
T ss_dssp             CCCSGGGEEECGGGCEEECCCTTCEE
T ss_pred             CCCCHHHEEECCCCCEEEccceeeee
Confidence                 899999999999999998753

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.48  E-value=2e-13  Score=85.05  Aligned_cols=85  Identities=11%  Similarity=0.101  Sum_probs=75.1

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.+ +|||++++++.+.  ...++++|++.++|.+++......+++..+..++.|++            
T Consensus        48 ~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ii  127 (330)
T 2izr_A           48 APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLI  127 (330)
T ss_dssp             SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            35688999999999 9999999999988  78899999999999999886555599999999988876            


Q ss_pred             ------hcccccCCCe-----EEEeecCCCC
Q 034245           77 ------RCCLLSFGKT-----VKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~-----~ki~dfgl~~   96 (100)
                            +||+++.++.     +||+|||++.
T Consensus       128 HrDlkp~Nill~~~~~~~~~~~kl~DFg~a~  158 (330)
T 2izr_A          128 YRDVKPENFLIGRPGNKTQQVIHIIDFALAK  158 (330)
T ss_dssp             CCCCCGGGEEECCGGGTCTTSEEECCCTTCE
T ss_pred             ccCCCHHHeeeccCCCCCCceEEEEEcccce
Confidence                  8999988776     9999999985

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.48  E-value=2.1e-13  Score=87.06  Aligned_cols=86  Identities=21%  Similarity=0.279  Sum_probs=73.4

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEeccc-ccHHHHhccCCC--CCCHHHHHHHHHHhH--------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQA-NDLAYLLKYPKD--SMDGYSIKFSSSDSL--------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~-~~l~~~l~~~~~--~~~~~~~~~~~~~~~--------   76 (100)
                      ...+.+|+.+++.++||||+++++++.    ...++++||++ ++|.+++.....  .+++..+..++.|++        
T Consensus        51 ~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  130 (396)
T 4eut_A           51 VDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE  130 (396)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            456789999999999999999999987    37899999999 999999876432  288999888888866        


Q ss_pred             ----------hcccc----cCCCeEEEeecCCCCC
Q 034245           77 ----------RCCLL----SFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------~nil~----~~~~~~ki~dfgl~~~   97 (100)
                                +||++    +..+.+||+|||++..
T Consensus       131 ~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~  165 (396)
T 4eut_A          131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE  165 (396)
T ss_dssp             TTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred             CCEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence                      89998    6777899999999854

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.48  E-value=2.4e-13  Score=83.35  Aligned_cols=85  Identities=20%  Similarity=0.201  Sum_probs=74.4

Q ss_pred             hhhHHHHHHHHhhCC-CCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMELN-HPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~-h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+.+|+.+++++. |||++++++.+.  ...++++|+++ ++|.+++.... .++...+..++.|++           
T Consensus        67 ~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i  145 (298)
T 1phk_A           67 REATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALHKLNI  145 (298)
T ss_dssp             HHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            356789999999995 999999999998  88999999999 89999987654 388899888888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+|++|||++..
T Consensus       146 ~H~dl~p~Nil~~~~~~~kl~dfg~~~~  173 (298)
T 1phk_A          146 VHRDLKPENILLDDDMNIKLTDFGFSCQ  173 (298)
T ss_dssp             ECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             ccCCCCcceEEEcCCCcEEEecccchhh
Confidence                   899999999999999998753

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.47  E-value=3.4e-13  Score=83.70  Aligned_cols=85  Identities=20%  Similarity=0.113  Sum_probs=73.3

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCC---CCCHHHHHHHHHHhH----------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKD---SMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~---~~~~~~~~~~~~~~~----------   76 (100)
                      ..+.+|+.+++.++|||++++++.+.  ...++++||++ ++|.+.+.....   ++++..+..++.|++          
T Consensus        72 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~  151 (326)
T 3uim_A           72 LQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHC  151 (326)
T ss_dssp             CHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            36889999999999999999999998  88899999999 899999976432   378888877777755          


Q ss_pred             -----------hcccccCCCeEEEeecCCCCC
Q 034245           77 -----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                 +||+++.++.+||+|||++..
T Consensus       152 ~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~  183 (326)
T 3uim_A          152 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKL  183 (326)
T ss_dssp             SSCEECCCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred             CCCeEeCCCchhhEEECCCCCEEeccCccccc
Confidence                       799999999999999999853

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.47  E-value=2e-13  Score=86.40  Aligned_cols=85  Identities=18%  Similarity=0.181  Sum_probs=74.7

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+.+|+.+++.+ +|||++++++.+.  ...++++||++ ++|.+++.... .+++..+..++.|++           
T Consensus       143 ~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH~~gi  221 (365)
T 2y7j_A          143 REATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFLHANNI  221 (365)
T ss_dssp             HHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            45678999999998 8999999999988  88999999999 89999987654 388999888888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+|++|||++..
T Consensus       222 ~H~Dlkp~NIl~~~~~~ikl~DfG~~~~  249 (365)
T 2y7j_A          222 VHRDLKPENILLDDNMQIRLSDFGFSCH  249 (365)
T ss_dssp             ECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             ecCCCCHHHEEECCCCCEEEEecCcccc
Confidence                   899999999999999998753

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.47  E-value=3e-13  Score=84.76  Aligned_cols=86  Identities=26%  Similarity=0.246  Sum_probs=73.1

Q ss_pred             cchhhHHHHHHHHhhCCC--Ccceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245           10 EVPSSMIREVSCLMELNH--PNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h--~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      .....+.+|+.+++.++|  ||++++++.+.  ...++++|+..++|.+++.... .+++..+..++.|++         
T Consensus        49 ~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~  127 (343)
T 3dbq_A           49 QTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH  127 (343)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Confidence            334678899999999976  99999999998  8899999965599999998765 388888888888876         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               +||+++ ++.+||+|||++..
T Consensus       128 ~iiHrDikp~NIll~-~~~~kl~DFG~a~~  156 (343)
T 3dbq_A          128 GIVHSDLKPANFLIV-DGMLKLIDFGIANQ  156 (343)
T ss_dssp             TCCCCCCCGGGEEEE-TTEEEECCCSSSCC
T ss_pred             CeecCCCCcceEEEE-CCcEEEeecccccc
Confidence                     899996 68899999999864

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.47  E-value=6.7e-13  Score=81.91  Aligned_cols=88  Identities=33%  Similarity=0.402  Sum_probs=73.8

Q ss_pred             chhhHHHHHHHHhhCC---CCcceeeeeeee--c-----cEEEEEecccccHHHHhccCCC-CCCHHHHHHHHHHhH---
Q 034245           11 VPSSMIREVSCLMELN---HPNIIRLMLVVS--Q-----GLCLFLEYQANDLAYLLKYPKD-SMDGYSIKFSSSDSL---   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~---h~~iv~l~~~~~--~-----~~~lv~e~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~---   76 (100)
                      ....+.+|+..++.++   |||++++++++.  .     ..++++|++.++|.+++..... .+++..+..++.|++   
T Consensus        54 ~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al  133 (308)
T 3g33_A           54 LPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL  133 (308)
T ss_dssp             CCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHH
T ss_pred             cchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHH
Confidence            3456788888887764   999999999987  2     4899999999999999877543 389999998988876   


Q ss_pred             ---------------hcccccCCCeEEEeecCCCCCC
Q 034245           77 ---------------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 ---------------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                                     +||+++.++.+||+|||++...
T Consensus       134 ~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~  170 (308)
T 3g33_A          134 DFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY  170 (308)
T ss_dssp             HHHHHTTCCCSCCCTTTEEECTTSCEEECSCSCTTTS
T ss_pred             HHHHHCCcccCCCCHHHEEEcCCCCEEEeeCcccccc
Confidence                           8999999999999999998643

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.47  E-value=4.1e-13  Score=84.73  Aligned_cols=85  Identities=14%  Similarity=0.101  Sum_probs=73.7

Q ss_pred             hhhHHHHHHHHhhCC---CCcceeeeeeee--ccEEEEEeccc-ccHHHHhcc----CCCCCCHHHHHHHHHHhH-----
Q 034245           12 PSSMIREVSCLMELN---HPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKY----PKDSMDGYSIKFSSSDSL-----   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~---h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~----~~~~~~~~~~~~~~~~~~-----   76 (100)
                      ...+.+|+..++.++   |+|++++++.+.  +..++++||++ ++|.+++..    ....+++..+..++.|++     
T Consensus       108 ~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~  187 (365)
T 3e7e_A          108 PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQ  187 (365)
T ss_dssp             HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHH
Confidence            456888898888887   999999999988  88999999999 999999864    223489999999998876     


Q ss_pred             -------------hcccccC-----------CCeEEEeecCCCC
Q 034245           77 -------------RCCLLSF-----------GKTVKVADLQALD   96 (100)
Q Consensus        77 -------------~nil~~~-----------~~~~ki~dfgl~~   96 (100)
                                   +||+++.           ++.+||+|||++.
T Consensus       188 lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~  231 (365)
T 3e7e_A          188 VHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSI  231 (365)
T ss_dssp             HHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCE
T ss_pred             HhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhh
Confidence                         8999988           8999999999983

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.47  E-value=3e-13  Score=81.74  Aligned_cols=88  Identities=14%  Similarity=0.123  Sum_probs=75.2

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEeccc-ccHHHHhccCCC-CCCHHHHHHHHHHhH-------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQA-NDLAYLLKYPKD-SMDGYSIKFSSSDSL-------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~-~~l~~~l~~~~~-~~~~~~~~~~~~~~~-------   76 (100)
                      .....+.+|+..++.++|||++++++.+.    ...++++||++ ++|.+++..... .+++..+..++.|++       
T Consensus        49 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH  128 (271)
T 3kmu_A           49 RKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH  128 (271)
T ss_dssp             HHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh
Confidence            34567899999999999999999999987    56799999999 899999987653 388999888888866       


Q ss_pred             -------------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                   +||+++.++.+++.|||++..
T Consensus       129 ~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~  162 (271)
T 3kmu_A          129 TLEPLIPRHALNSRSVMIDEDMTARISMADVKFS  162 (271)
T ss_dssp             TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred             cCCCceecCCCccceEEEcCCcceeEEeccceee
Confidence                         899999999999998887643

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.47  E-value=3.3e-13  Score=85.19  Aligned_cols=84  Identities=21%  Similarity=0.279  Sum_probs=73.7

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee-------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH--------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS-------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~-------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~--------   76 (100)
                      ...+.+|+.+++.++||||+++++++.       ...++++|++.++|.+.+....  ++...+..++.|++        
T Consensus        69 ~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~~~L~~~l~~~~--~~~~~~~~i~~qi~~aL~~LH~  146 (364)
T 3qyz_A           69 CQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHS  146 (364)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCSEEHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcccCcCHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHHH
Confidence            466889999999999999999999886       3589999999999999887643  89999888888876        


Q ss_pred             ----------hcccccCCCeEEEeecCCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                +||+++.++.+||+|||++..
T Consensus       147 ~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~  177 (364)
T 3qyz_A          147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARV  177 (364)
T ss_dssp             TTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             CCeecCCCChHhEEECCCCCEEEEeCcceEe
Confidence                      899999999999999998853

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.47  E-value=1.1e-13  Score=86.37  Aligned_cols=88  Identities=25%  Similarity=0.230  Sum_probs=69.8

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC-------------------------
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK-------------------------   60 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~-------------------------   60 (100)
                      ......+.+|+.+++.++||||+++++.+.  ...++++||++ ++|.+.+....                         
T Consensus        69 ~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (345)
T 3hko_A           69 PKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEE  148 (345)
T ss_dssp             -CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhccccccccccccccccccccccccc
Confidence            445567899999999999999999999998  88999999999 99999885210                         


Q ss_pred             --------------CCCCHHHHHHHHHHhH------------------hcccccCCC--eEEEeecCCCC
Q 034245           61 --------------DSMDGYSIKFSSSDSL------------------RCCLLSFGK--TVKVADLQALD   96 (100)
Q Consensus        61 --------------~~~~~~~~~~~~~~~~------------------~nil~~~~~--~~ki~dfgl~~   96 (100)
                                    ..+++..+..++.|++                  +||+++.++  .+||+|||++.
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~  218 (345)
T 3hko_A          149 AINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSK  218 (345)
T ss_dssp             HHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCE
T ss_pred             ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccc
Confidence                          0123555666666655                  899998665  89999999885

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.47  E-value=5.3e-13  Score=80.84  Aligned_cols=85  Identities=22%  Similarity=0.239  Sum_probs=69.3

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ..+.+.+|+.+++.++|||++++++.+.  ...++++||++ ++|.+++...  ++++..+..++.|++           
T Consensus        49 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~~~~  126 (271)
T 3dtc_A           49 TIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLHDEAI  126 (271)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTTEEHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHHSSS
T ss_pred             HHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCCCCHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence            3467889999999999999999999998  78899999999 9999988654  388888888887765           


Q ss_pred             ----------hcccccC--------CCeEEEeecCCCCC
Q 034245           77 ----------RCCLLSF--------GKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------~nil~~~--------~~~~ki~dfgl~~~   97 (100)
                                +||+++.        ++.+|++|||++..
T Consensus       127 ~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~  165 (271)
T 3dtc_A          127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE  165 (271)
T ss_dssp             SCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC---
T ss_pred             CceeecCCchHHEEEecccccccccCcceEEccCCcccc
Confidence                      7888875        67899999999853

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.47  E-value=4e-13  Score=84.77  Aligned_cols=82  Identities=12%  Similarity=-0.006  Sum_probs=69.5

Q ss_pred             HHHHHHHHhhCCCCcceeeeeeee------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           15 MIREVSCLMELNHPNIIRLMLVVS------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        15 ~~~e~~~l~~l~h~~iv~l~~~~~------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ..+|+..++.++||||+++++.+.      ...++++||+.++|.+++......+++..+..++.|++            
T Consensus        95 ~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ii  174 (364)
T 3op5_A           95 QIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYV  174 (364)
T ss_dssp             HHHHHHHHTTCSCCCSCCEEEEEEEEETTEEEEEEEEECEEEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHhhccCCCCCeEEeeeeeccCCcceEEEEEeCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence            445556667788999999999987      33799999999999999987655699999999988876            


Q ss_pred             ------hccccc--CCCeEEEeecCCCC
Q 034245           77 ------RCCLLS--FGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~--~~~~~ki~dfgl~~   96 (100)
                            +||+++  .++.+||+|||++.
T Consensus       175 HrDlkp~Nill~~~~~~~~kl~DFG~a~  202 (364)
T 3op5_A          175 HGDIKASNLLLNYKNPDQVYLVDYGLAY  202 (364)
T ss_dssp             CCCCCGGGEEEESSCTTCEEECCCTTCE
T ss_pred             EecCCHHHEEEecCCCCeEEEEECCcce
Confidence                  899998  88999999999984

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.46  E-value=1.3e-13  Score=86.99  Aligned_cols=84  Identities=17%  Similarity=0.216  Sum_probs=74.0

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+.+|+.+++.+ +|||++++++.+.  ...++++||++ ++|.+++.... .++...+..++.|++           
T Consensus       102 ~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~i  180 (355)
T 1vzo_A          102 TEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHKLGI  180 (355)
T ss_dssp             GGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            45678899999999 7999999999988  88999999999 89999987654 388888888888866           


Q ss_pred             -------hcccccCCCeEEEeecCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~   96 (100)
                             +||+++.++.+||+|||++.
T Consensus       181 vH~Dlkp~NIll~~~~~~kl~DfG~a~  207 (355)
T 1vzo_A          181 IYRDIKLENILLDSNGHVVLTDFGLSK  207 (355)
T ss_dssp             CCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred             ccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence                   89999999999999999875

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.46  E-value=5.5e-13  Score=81.55  Aligned_cols=88  Identities=20%  Similarity=0.262  Sum_probs=74.4

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      ......+.+|+..++.++|||++++++.+.  ...++++|+++ +++.+.+.... .++...+..++.|++         
T Consensus        62 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~  140 (287)
T 2wei_A           62 NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKH  140 (287)
T ss_dssp             SSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            344567899999999999999999999998  88999999998 89988876544 388888888888866         


Q ss_pred             ---------hcccccCC---CeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFG---KTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~---~~~ki~dfgl~~~   97 (100)
                               +||+++.+   +.+|++|||++..
T Consensus       141 ~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~  173 (287)
T 2wei_A          141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC  173 (287)
T ss_dssp             TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGT
T ss_pred             CeeccCCChhhEEEecCCCcccEEEeccCccee
Confidence                     89999653   4799999998754

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.46  E-value=7.8e-13  Score=81.96  Aligned_cols=89  Identities=30%  Similarity=0.348  Sum_probs=73.6

Q ss_pred             cchhhHHHHHHHHhhC---CCCcceeeeeeee-------ccEEEEEecccccHHHHhccCC-CCCCHHHHHHHHHHhH--
Q 034245           10 EVPSSMIREVSCLMEL---NHPNIIRLMLVVS-------QGLCLFLEYQANDLAYLLKYPK-DSMDGYSIKFSSSDSL--   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l---~h~~iv~l~~~~~-------~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~--   76 (100)
                      .....+.+|+.+++.+   +|||++++++++.       ...++++|+++++|.+++.... ..++...+..++.|++  
T Consensus        53 ~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~  132 (326)
T 1blx_A           53 GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG  132 (326)
T ss_dssp             SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHH
T ss_pred             cCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHH
Confidence            3345677888887766   8999999999874       5689999999999999887643 2388888888888866  


Q ss_pred             ----------------hcccccCCCeEEEeecCCCCCC
Q 034245           77 ----------------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 ----------------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                                      +||+++.++.+||+|||++...
T Consensus       133 l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~  170 (326)
T 1blx_A          133 LDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY  170 (326)
T ss_dssp             HHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCC
T ss_pred             HHHHHHCCceeccCCHHHeEEcCCCCEEEecCcccccc
Confidence                            8999999999999999998653

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.46  E-value=1.9e-13  Score=84.34  Aligned_cols=86  Identities=20%  Similarity=0.279  Sum_probs=73.2

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee---ccEEEEEeccc-ccHHHHhccCCCC---------------CCHHHHHHH
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS---QGLCLFLEYQA-NDLAYLLKYPKDS---------------MDGYSIKFS   71 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~---~~~~lv~e~~~-~~l~~~l~~~~~~---------------~~~~~~~~~   71 (100)
                      ...+.+|+.+++.+ +|||++++++.+.   ...++++||++ ++|.+++......               ++...+..+
T Consensus        74 ~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (316)
T 2xir_A           74 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY  153 (316)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHH
Confidence            35688999999999 7999999999987   45899999999 8999999765432               677888888


Q ss_pred             HHHhH------------------hcccccCCCeEEEeecCCCCC
Q 034245           72 SSDSL------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        72 ~~~~~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      +.|++                  +||+++.++.+|++|||++..
T Consensus       154 ~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~  197 (316)
T 2xir_A          154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD  197 (316)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSC
T ss_pred             HHHHHHHHHHHHhCCcccccCccceEEECCCCCEEECCCccccc
Confidence            87765                  899999999999999999864

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.46  E-value=7e-13  Score=80.60  Aligned_cols=89  Identities=17%  Similarity=0.123  Sum_probs=73.7

Q ss_pred             CcchhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC---CCCCHHHHHHHHHHhH-----
Q 034245            9 EEVPSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK---DSMDGYSIKFSSSDSL-----   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~---~~~~~~~~~~~~~~~~-----   76 (100)
                      ......+.+|+..+..+ +|||++++++.+.  +..++++||++ ++|.+++....   ..+++..+..++.|++     
T Consensus        51 ~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~  130 (289)
T 1x8b_A           51 SVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRY  130 (289)
T ss_dssp             SHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHH
Confidence            33456788999999998 9999999999998  88999999999 89999987531   3488999988888876     


Q ss_pred             -------------hcccccC-------------------CCeEEEeecCCCCC
Q 034245           77 -------------RCCLLSF-------------------GKTVKVADLQALDW   97 (100)
Q Consensus        77 -------------~nil~~~-------------------~~~~ki~dfgl~~~   97 (100)
                                   +||+++.                   ...+|++|||.+..
T Consensus       131 lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~  183 (289)
T 1x8b_A          131 IHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTR  183 (289)
T ss_dssp             HHHTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEE
T ss_pred             HHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccc
Confidence                         8999984                   34799999998754

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.45  E-value=3.7e-13  Score=91.07  Aligned_cols=84  Identities=18%  Similarity=0.229  Sum_probs=74.7

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+.+|..++..+ +||+++++++.+.  ..+|+++||++ ++|...+..... +++..+..++.|++           
T Consensus       385 ~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH~~gI  463 (674)
T 3pfq_A          385 VECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR-FKEPHAVFYAAEIAIGLFFLQSKGI  463 (674)
T ss_dssp             THHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTSE
T ss_pred             HHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            45678899999887 7999999999988  88999999999 999999987553 89999999988876           


Q ss_pred             -------hcccccCCCeEEEeecCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~   96 (100)
                             +||+++.++.+||+|||++.
T Consensus       464 iHrDLKp~NILl~~~g~ikL~DFGla~  490 (674)
T 3pfq_A          464 IYRDLKLDNVMLDSEGHIKIADFGMCK  490 (674)
T ss_dssp             ECCCCCSTTEEECSSSCEEECCCTTCE
T ss_pred             EeccCChhhEEEcCCCcEEEeecceee
Confidence                   89999999999999999985

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.45  E-value=1.2e-13  Score=84.71  Aligned_cols=85  Identities=19%  Similarity=0.301  Sum_probs=66.2

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhcc-------CCCCCCHHHHHHHHHHhH-----
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKY-------PKDSMDGYSIKFSSSDSL-----   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~-------~~~~~~~~~~~~~~~~~~-----   76 (100)
                      ...+.+|+..++.++|||++++++.+.  ...++++||++ ++|.+++..       ....++...+..++.|++     
T Consensus        57 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~  136 (303)
T 2vwi_A           57 MDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEY  136 (303)
T ss_dssp             ---------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHH
Confidence            456889999999999999999999998  88999999998 899998863       123488888888888866     


Q ss_pred             -------------hcccccCCCeEEEeecCCCC
Q 034245           77 -------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -------------~nil~~~~~~~ki~dfgl~~   96 (100)
                                   +||+++.++.+|++|||++.
T Consensus       137 lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~  169 (303)
T 2vwi_A          137 LHKNGQIHRDVKAGNILLGEDGSVQIADFGVSA  169 (303)
T ss_dssp             HHHTTCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred             HHhCCCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence                         89999999999999999763

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.45  E-value=1.2e-13  Score=84.06  Aligned_cols=87  Identities=26%  Similarity=0.350  Sum_probs=70.4

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee---ccEEEEEeccc-ccHHHHhccCCC-CCCHHHHHHHHHHhH---------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS---QGLCLFLEYQA-NDLAYLLKYPKD-SMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~---~~~~lv~e~~~-~~l~~~l~~~~~-~~~~~~~~~~~~~~~---------   76 (100)
                      ..+.+.+|+..++.++|||++++++.+.   +..++++|+++ ++|.+++..... .++...+..++.|++         
T Consensus        57 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~  136 (278)
T 1byg_A           57 TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN  136 (278)
T ss_dssp             --HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC
Confidence            4567899999999999999999999876   57899999999 899999875432 267777777877765         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               +||+++.++.+|++|||++..
T Consensus       137 ~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~  166 (278)
T 1byg_A          137 NFVHRDLAARNVLVSEDNVAKVSDFGLTKE  166 (278)
T ss_dssp             TCCCSCCSGGGEEECTTSCEEECCCCC---
T ss_pred             CccccCCCcceEEEeCCCcEEEeecccccc
Confidence                     899999999999999998754

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.45  E-value=1.1e-12  Score=80.63  Aligned_cols=87  Identities=21%  Similarity=0.259  Sum_probs=71.8

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEecccccHHHHhccC-CCCCCHHHHHHHHHHhH---------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQANDLAYLLKYP-KDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~---------   76 (100)
                      ....+.+|+.+++.++|||++++++.+.    ...++++||+++.+.+.+... ...++...+..++.|++         
T Consensus        49 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~  128 (305)
T 2wtk_C           49 GEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ  128 (305)
T ss_dssp             HHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC
Confidence            3456889999999999999999999984    678999999995566666543 23488888888888866         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               +||+++.++.+|++|||++..
T Consensus       129 ~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~  158 (305)
T 2wtk_C          129 GIVHKDIKPGNLLLTTGGTLKISALGVAEA  158 (305)
T ss_dssp             TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             CeeecCCCcccEEEcCCCcEEeeccccccc
Confidence                     899999999999999998853

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.45  E-value=6e-13  Score=84.92  Aligned_cols=87  Identities=25%  Similarity=0.241  Sum_probs=72.7

Q ss_pred             CcchhhHHHHHHHHhhCC--CCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH--------
Q 034245            9 EEVPSSMIREVSCLMELN--HPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~--h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~--------   76 (100)
                      ......+.+|+.+++.++  ||||+++++.+.  ..+++++|+..++|.+++.... .+++..+..++.|++        
T Consensus        95 ~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~  173 (390)
T 2zmd_A           95 NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQ  173 (390)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            344567899999999996  599999999888  8899999954499999998765 488888888888866        


Q ss_pred             ----------hcccccCCCeEEEeecCCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                +||++. ++.+||+|||++..
T Consensus       174 ~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~  203 (390)
T 2zmd_A          174 HGIVHSDLKPANFLIV-DGMLKLIDFGIANQ  203 (390)
T ss_dssp             TTCCCCCCCGGGEEES-SSCEEECCCSSSCC
T ss_pred             CCeeecCCCHHHEEEE-CCeEEEEecCcccc
Confidence                      899994 68999999999864

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.45  E-value=4.5e-13  Score=84.84  Aligned_cols=84  Identities=18%  Similarity=0.265  Sum_probs=71.3

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--cc------EEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QG------LCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~------~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~------   76 (100)
                      ....+.+|+.+++.++|||++++++++.  ..      .++++|++.+++.+.+..   .+++..+..++.|++      
T Consensus        84 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~L  160 (371)
T 4exu_A           84 FAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGM---EFSEEKIQYLVYQMLKGLKYI  160 (371)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEECCCEEHHHHTTS---CCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEEccccccHHHHhhc---CCCHHHHHHHHHHHHHHHHHH
Confidence            3467889999999999999999999988  33      399999999888888743   388999888888866      


Q ss_pred             ------------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                  +||+++.++.+||+|||++..
T Consensus       161 H~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~  193 (371)
T 4exu_A          161 HSAGVVHRDLKPGNLAVNEDCELKILDFGLARH  193 (371)
T ss_dssp             HHTTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred             HHCCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence                        899999999999999999864

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.44  E-value=2.3e-13  Score=82.77  Aligned_cols=87  Identities=24%  Similarity=0.308  Sum_probs=72.2

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEeccc-ccHHHHhccC---CCCCCHHHHHHHHHHhH-----
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQA-NDLAYLLKYP---KDSMDGYSIKFSSSDSL-----   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~~~~~~~-----   76 (100)
                      ...+.+.+|+..++.++|||++++++.+.    ...++++||++ ++|.+++...   ...+++..+..++.|++     
T Consensus        47 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~  126 (279)
T 2w5a_A           47 AEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE  126 (279)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHH
Confidence            34567889999999999999999999874    67899999999 8999998642   22378888877776654     


Q ss_pred             ------------------hcccccCCCeEEEeecCCCC
Q 034245           77 ------------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------------------~nil~~~~~~~ki~dfgl~~   96 (100)
                                        +||+++.++.+|++|||++.
T Consensus       127 lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~  164 (279)
T 2w5a_A          127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR  164 (279)
T ss_dssp             HHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred             HhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence                              78899999999999999874

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.44  E-value=8.1e-13  Score=81.97  Aligned_cols=88  Identities=20%  Similarity=0.287  Sum_probs=74.2

Q ss_pred             cchhhHHHHHHHHhhC-CCCcceeeeeeee--------ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH--
Q 034245           10 EVPSSMIREVSCLMEL-NHPNIIRLMLVVS--------QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL--   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~--------~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~--   76 (100)
                      .....+.+|+..++.+ +|||++++++.+.        ...++++||++ ++|.+++.... ..++...+..++.|++  
T Consensus        62 ~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~  141 (326)
T 2x7f_A           62 DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRG  141 (326)
T ss_dssp             STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHH
Confidence            3456788999999998 8999999999986        36899999999 89999987643 3488888888888866  


Q ss_pred             ----------------hcccccCCCeEEEeecCCCCC
Q 034245           77 ----------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                      +||+++.++.+|++|||++..
T Consensus       142 l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~  178 (326)
T 2x7f_A          142 LSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ  178 (326)
T ss_dssp             HHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC-
T ss_pred             HHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCcee
Confidence                            899999999999999998764

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.44  E-value=2.8e-13  Score=85.85  Aligned_cols=85  Identities=19%  Similarity=0.249  Sum_probs=64.7

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~------   76 (100)
                      ....+.+|+.+++.++||||+++++++.        ...++++|++.++|.+++...  .++...+..++.|++      
T Consensus        71 ~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~L  148 (367)
T 2fst_X           71 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYI  148 (367)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECCCEECC-----C--CCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEecccCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH
Confidence            3456889999999999999999999885        347999999988888887653  489999988888876      


Q ss_pred             ------------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                  +||+++.++.+||+|||++..
T Consensus       149 H~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~  181 (367)
T 2fst_X          149 HSADIIHRDLKPSNLAVNEDCELKILDFGLARH  181 (367)
T ss_dssp             HHTTCCCCCCCGGGEEECTTCCEEECC------
T ss_pred             HHCCeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence                        899999999999999999864

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.44  E-value=5.5e-13  Score=83.38  Aligned_cols=85  Identities=13%  Similarity=0.201  Sum_probs=73.9

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHH------hccC-CCCCCHHHHHHHHHHhH------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYL------LKYP-KDSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~------l~~~-~~~~~~~~~~~~~~~~~------   76 (100)
                      ..+.+|+.+++.++|||++++++++.  +..++++||++ ++|.++      +... ...++...+..++.|++      
T Consensus        88 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l  167 (348)
T 2pml_X           88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYI  167 (348)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHH
Confidence            67899999999999999999999998  88999999999 899988      5542 33488888888887765      


Q ss_pred             -------------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                   +||+++.++.+|++|||++..
T Consensus       168 H~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~  201 (348)
T 2pml_X          168 HNEKNICHRDVKPSNILMDKNGRVKLSDFGESEY  201 (348)
T ss_dssp             HHTSCEECCCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             hccCCEeecCCChHhEEEcCCCcEEEeccccccc
Confidence                         799999999999999998854

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.43  E-value=9.3e-13  Score=81.45  Aligned_cols=88  Identities=24%  Similarity=0.273  Sum_probs=69.7

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeeeccEEEEEeccc-ccHHHHhccCCC--CCCHHHHHHHHHHhH----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVSQGLCLFLEYQA-NDLAYLLKYPKD--SMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~lv~e~~~-~~l~~~l~~~~~--~~~~~~~~~~~~~~~----------   76 (100)
                      .....+.+|+..++.++||||+++++.+.+..++++||++ ++|.+++.....  .++...+..++.|++          
T Consensus        43 ~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  122 (307)
T 2eva_A           43 SERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ  122 (307)
T ss_dssp             THHHHHHHHHHHHHHCCCTTBCCEEEBCTTTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCS
T ss_pred             hHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3456789999999999999999999987766899999999 899999976542  267777776666654          


Q ss_pred             -----------hcccccCCCe-EEEeecCCCCC
Q 034245           77 -----------RCCLLSFGKT-VKVADLQALDW   97 (100)
Q Consensus        77 -----------~nil~~~~~~-~ki~dfgl~~~   97 (100)
                                 +||+++.++. +|++|||++..
T Consensus       123 ~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~  155 (307)
T 2eva_A          123 PKALIHRDLKPPNLLLVAGGTVLKICDFGTACD  155 (307)
T ss_dssp             SSCCCCCCCSGGGEEEETTTTEEEECCCCC---
T ss_pred             CCCeecCCCChhHEEEeCCCCEEEEcccccccc
Confidence                       7899987775 89999999854

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.43  E-value=4.9e-13  Score=82.97  Aligned_cols=89  Identities=24%  Similarity=0.280  Sum_probs=73.5

Q ss_pred             cchhhHHHHHHHHhhCC-CCcceeeeeeee----------ccEEEEEecccccHHHHhcc--CCCCCCHHHHHHHHHHhH
Q 034245           10 EVPSSMIREVSCLMELN-HPNIIRLMLVVS----------QGLCLFLEYQANDLAYLLKY--PKDSMDGYSIKFSSSDSL   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~----------~~~~lv~e~~~~~l~~~l~~--~~~~~~~~~~~~~~~~~~   76 (100)
                      .....+.+|+..++.+. |||++++++.+.          ...++++||+.|+|.+++..  ...++++..+..++.|++
T Consensus        67 ~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~  146 (337)
T 3ll6_A           67 EKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTC  146 (337)
T ss_dssp             HHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHH
Confidence            34566889999999995 999999999883          45799999999998888764  233489999888888865


Q ss_pred             --------------------hcccccCCCeEEEeecCCCCCC
Q 034245           77 --------------------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 --------------------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                                          +||+++.++.+||+|||++...
T Consensus       147 ~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~  188 (337)
T 3ll6_A          147 RAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTI  188 (337)
T ss_dssp             HHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCC
T ss_pred             HHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccceec
Confidence                                7999999999999999998643

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.43  E-value=7.8e-13  Score=82.82  Aligned_cols=84  Identities=19%  Similarity=0.279  Sum_probs=72.8

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee-------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH--------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS-------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~-------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~--------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.       ...++++|++.++|.+.+...  .++...+..++.|++        
T Consensus        53 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~  130 (353)
T 2b9h_A           53 ALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLHG  130 (353)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEeccCccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHH
Confidence            456789999999999999999998765       458999999999999988764  388999888888866        


Q ss_pred             ----------hcccccCCCeEEEeecCCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                +||+++.++.+||+|||++..
T Consensus       131 ~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~  161 (353)
T 2b9h_A          131 SNVIHRDLKPSNLLINSNCDLKVCDFGLARI  161 (353)
T ss_dssp             TTEECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             CCeecCCCCHHHeEEcCCCcEEEEecccccc
Confidence                      899999999999999998853

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.43  E-value=5.1e-13  Score=83.08  Aligned_cols=85  Identities=25%  Similarity=0.382  Sum_probs=71.6

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC------CCCCHHHHHHHHHHhH------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK------DSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~------~~~~~~~~~~~~~~~~------   76 (100)
                      ...+.+|+.+++.++|||++++++.+.  ...++++||++ ++|.+++....      ..++...+..++.|++      
T Consensus        77 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~L  156 (327)
T 2yfx_A           77 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL  156 (327)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHH
Confidence            456889999999999999999999998  78899999998 99999997643      2377888888887765      


Q ss_pred             ------------hcccccC---CCeEEEeecCCCC
Q 034245           77 ------------RCCLLSF---GKTVKVADLQALD   96 (100)
Q Consensus        77 ------------~nil~~~---~~~~ki~dfgl~~   96 (100)
                                  +||+++.   ...+|++|||++.
T Consensus       157 H~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~  191 (327)
T 2yfx_A          157 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR  191 (327)
T ss_dssp             HHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHH
T ss_pred             hhCCeecCcCCHhHEEEecCCCcceEEECcccccc
Confidence                        8999984   4579999999763

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.43  E-value=1e-12  Score=81.86  Aligned_cols=88  Identities=20%  Similarity=0.236  Sum_probs=74.4

Q ss_pred             cchhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccC-CCCCCHHHHHHHHHHhH--------
Q 034245           10 EVPSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYP-KDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~~~~--------   76 (100)
                      .....+.+|+..++.+ +|||++++++.+.  ...++++||++ ++|.+++... ...+++..+..++.|++        
T Consensus        70 ~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~  149 (327)
T 3lm5_A           70 DCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ  149 (327)
T ss_dssp             ECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            3456788999999998 5699999999998  88999999999 8999988654 23488999988888876        


Q ss_pred             ----------hcccccC---CCeEEEeecCCCCC
Q 034245           77 ----------RCCLLSF---GKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------~nil~~~---~~~~ki~dfgl~~~   97 (100)
                                +||+++.   .+.+||+|||++..
T Consensus       150 ~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~  183 (327)
T 3lm5_A          150 NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRK  183 (327)
T ss_dssp             TTEECSCCCGGGEEESCBTTBCCEEECCGGGCEE
T ss_pred             CCeecCcCChHHEEEecCCCCCcEEEeeCccccc
Confidence                      8999987   78999999998854

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.42  E-value=1.4e-12  Score=83.57  Aligned_cols=85  Identities=15%  Similarity=0.108  Sum_probs=70.4

Q ss_pred             hhHHHHHHHH-hhCCCCcceeeeeeee------ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH-------
Q 034245           13 SSMIREVSCL-MELNHPNIIRLMLVVS------QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus        13 ~~~~~e~~~l-~~l~h~~iv~l~~~~~------~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~-------   76 (100)
                      ..+.+|+..+ +..+||||+++++++.      ..+|+++||++ ++|.+++.... ..+++..+..++.|++       
T Consensus        99 ~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH  178 (400)
T 1nxk_A           99 PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH  178 (400)
T ss_dssp             HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            4577899887 4458999999999875      45899999999 89999998754 2489999999988876       


Q ss_pred             -----------hcccccC---CCeEEEeecCCCCC
Q 034245           77 -----------RCCLLSF---GKTVKVADLQALDW   97 (100)
Q Consensus        77 -----------~nil~~~---~~~~ki~dfgl~~~   97 (100)
                                 +||+++.   ++.+||+|||++..
T Consensus       179 ~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~  213 (400)
T 1nxk_A          179 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE  213 (400)
T ss_dssp             HTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred             HCCccccCcCcceEEEecCCCCccEEEEecccccc
Confidence                       8999987   78999999999853

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.42  E-value=9.9e-13  Score=80.00  Aligned_cols=85  Identities=20%  Similarity=0.195  Sum_probs=72.0

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee------------------ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHH
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS------------------QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSS   72 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~------------------~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~   72 (100)
                      ..+.+|+..++.++|||++++.+.+.                  ...++++||++ ++|.+++.... ..+++..+..++
T Consensus        49 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~  128 (284)
T 2a19_B           49 EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELF  128 (284)
T ss_dssp             GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHH
Confidence            46789999999999999999998873                  33799999999 89999986542 348888888888


Q ss_pred             HHhH------------------hcccccCCCeEEEeecCCCCC
Q 034245           73 SDSL------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        73 ~~~~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      .|++                  +||+++.++.+|++|||++..
T Consensus       129 ~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  171 (284)
T 2a19_B          129 EQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTS  171 (284)
T ss_dssp             HHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             HHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchhhee
Confidence            8866                  899999999999999998753

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.42  E-value=1.4e-12  Score=82.01  Aligned_cols=87  Identities=18%  Similarity=0.229  Sum_probs=73.8

Q ss_pred             chhhHHHHHHHHhhCC-----CCcceeeeeeee--ccEEEEEecccccHHHHhccCC-CCCCHHHHHHHHHHhH------
Q 034245           11 VPSSMIREVSCLMELN-----HPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPK-DSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~-----h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~------   76 (100)
                      ....+.+|+.+++.++     ||||+++++.+.  ...++++|++.++|.+++.... .+++...+..++.|++      
T Consensus        74 ~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L  153 (360)
T 3llt_A           74 YTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYL  153 (360)
T ss_dssp             HHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            3456778999999986     999999999998  8899999999999999987654 2488899888888876      


Q ss_pred             ------------hcccccC-------------------------CCeEEEeecCCCCC
Q 034245           77 ------------RCCLLSF-------------------------GKTVKVADLQALDW   97 (100)
Q Consensus        77 ------------~nil~~~-------------------------~~~~ki~dfgl~~~   97 (100)
                                  +||+++.                         ++.+||+|||++..
T Consensus       154 H~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~  211 (360)
T 3llt_A          154 RKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATF  211 (360)
T ss_dssp             HHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEE
T ss_pred             HHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCcee
Confidence                        8999974                         78999999999853

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.41  E-value=1e-12  Score=82.50  Aligned_cols=84  Identities=18%  Similarity=0.265  Sum_probs=71.5

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--c------cEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--Q------GLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~------~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------   76 (100)
                      ...+.+|+.+++.++|||++++++++.  .      ..++++|++.+++.+.+..   .++...+..++.|++       
T Consensus        67 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH  143 (353)
T 3coi_A           67 AKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIH  143 (353)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECCSEEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEeccccCCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH
Confidence            456889999999999999999999987  2      2499999999888877643   388888888888866       


Q ss_pred             -----------hcccccCCCeEEEeecCCCCCC
Q 034245           77 -----------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 -----------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                                 +||+++.++.+|++|||++...
T Consensus       144 ~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~  176 (353)
T 3coi_A          144 SAGVVHRDLKPGNLAVNEDCELKILDFGLARHA  176 (353)
T ss_dssp             HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred             HCCcccCCCCHHHEeECCCCcEEEeecccccCC
Confidence                       8999999999999999998653

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.41  E-value=3.2e-12  Score=78.37  Aligned_cols=83  Identities=22%  Similarity=0.189  Sum_probs=68.1

Q ss_pred             hhhHHHHHHHHhh--CCCCcceeeeeeee------ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------
Q 034245           12 PSSMIREVSCLME--LNHPNIIRLMLVVS------QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~--l~h~~iv~l~~~~~------~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------   76 (100)
                      ...+.+|.+++..  ++|||++++++.+.      ...++++||++ ++|.+++...  .+++..+..++.|++      
T Consensus        44 ~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~l  121 (301)
T 3q4u_A           44 EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHL  121 (301)
T ss_dssp             HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHH
Confidence            3456677777766  79999999998865      45899999999 8999999654  388888877776654      


Q ss_pred             --------------------hcccccCCCeEEEeecCCCC
Q 034245           77 --------------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 --------------------~nil~~~~~~~ki~dfgl~~   96 (100)
                                          +||+++.++.+||+|||++.
T Consensus       122 H~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~  161 (301)
T 3q4u_A          122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV  161 (301)
T ss_dssp             HSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             HHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCee
Confidence                                79999999999999999874

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.41  E-value=3.2e-12  Score=78.28  Aligned_cols=85  Identities=13%  Similarity=0.127  Sum_probs=74.4

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+..++.+ +|++++++.+.+.  ...++++|++.++|.+++.....+++...+..++.|++            
T Consensus        49 ~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iv  128 (298)
T 1csn_A           49 APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLV  128 (298)
T ss_dssp             SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred             cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEecCCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence            45688999999999 8999999999888  88899999999999999987665689999999988876            


Q ss_pred             ------hcccccCCCe-----EEEeecCCCC
Q 034245           77 ------RCCLLSFGKT-----VKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~-----~ki~dfgl~~   96 (100)
                            +||+++.++.     +|++|||++.
T Consensus       129 H~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~  159 (298)
T 1csn_A          129 YRDIKPDNFLIGRPNSKNANMIYVVDFGMVK  159 (298)
T ss_dssp             CCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred             cCCCCHHHEEeccCCCCCCCeEEEEECcccc
Confidence                  8999977665     9999999885

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.40  E-value=1.2e-12  Score=79.95  Aligned_cols=83  Identities=10%  Similarity=0.105  Sum_probs=63.9

Q ss_pred             HHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhcc---CCCCCCHHHHHHHHHHhH-------------
Q 034245           15 MIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKY---PKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        15 ~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~---~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      +.++...++.++|||++++++.+.  +..++++||+++++.+.+..   ....+++..+..++.|++             
T Consensus        53 ~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~  132 (290)
T 3fme_A           53 LMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVI  132 (290)
T ss_dssp             HHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred             HHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCee
Confidence            334444578889999999999998  88999999999887666643   333489988888888765             


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +||+++.++.+||+|||++..
T Consensus       133 H~dlkp~Nil~~~~~~~kl~Dfg~~~~  159 (290)
T 3fme_A          133 HRDVKPSNVLINALGQVKMCDFGISGY  159 (290)
T ss_dssp             CCCCSGGGCEECTTCCEEBCCC-----
T ss_pred             cCCCCHHHEEECCCCCEEEeecCCccc
Confidence                  799999999999999998854

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.40  E-value=1.7e-12  Score=81.44  Aligned_cols=82  Identities=15%  Similarity=0.008  Sum_probs=71.4

Q ss_pred             hHHHHHHHHhhCCCCcceeeeeeee------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           14 SMIREVSCLMELNHPNIIRLMLVVS------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        14 ~~~~e~~~l~~l~h~~iv~l~~~~~------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      .+.+|+..++.++|||++++++.+.      ...++++|++.++|.+++.... .+++..+..++.|++           
T Consensus        94 ~~~~e~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~i  172 (345)
T 2v62_A           94 DCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHENEY  172 (345)
T ss_dssp             HHHHHHHHHHTCSCCCCCCEEEEEEEESSSCEEEEEEEECEEEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHhhccccccCcceeecccccccCCCcEEEEEEeccCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            4667888899999999999999876      4689999999999999988765 489999999988876           


Q ss_pred             -------hcccccCCC--eEEEeecCCCC
Q 034245           77 -------RCCLLSFGK--TVKVADLQALD   96 (100)
Q Consensus        77 -------~nil~~~~~--~~ki~dfgl~~   96 (100)
                             +||+++.++  .+||+|||++.
T Consensus       173 vH~Dlkp~NIll~~~~~~~~kL~Dfg~a~  201 (345)
T 2v62_A          173 VHGDIKAANLLLGYKNPDQVYLADYGLSY  201 (345)
T ss_dssp             ECSCCSGGGEEEESSSTTSEEECCCTTCE
T ss_pred             eCCCcCHHHEEEccCCCCcEEEEeCCCce
Confidence                   899998777  99999999984

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.39  E-value=2.2e-12  Score=81.08  Aligned_cols=82  Identities=17%  Similarity=0.145  Sum_probs=69.4

Q ss_pred             hHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           14 SMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        14 ~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ...+|+..+..+ +||||+++++.+.  ...|+++||++ ++|.+.+..... +++..+..++.|++             
T Consensus        61 ~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~-~~~~~~~~~~~qi~~al~~lH~~givH  139 (342)
T 2qr7_A           61 DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF-FSEREASAVLFTITKTVEYLHAQGVVH  139 (342)
T ss_dssp             CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCTT-CCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCcEe
Confidence            356788888887 7999999999999  88999999999 999999877653 89999998988876             


Q ss_pred             -----hcccccCC----CeEEEeecCCCC
Q 034245           77 -----RCCLLSFG----KTVKVADLQALD   96 (100)
Q Consensus        77 -----~nil~~~~----~~~ki~dfgl~~   96 (100)
                           +||++...    +.+||+|||++.
T Consensus       140 rDlkp~NIl~~~~~~~~~~~kl~Dfg~a~  168 (342)
T 2qr7_A          140 RDLKPSNILYVDESGNPESIRICDFGFAK  168 (342)
T ss_dssp             SCCCGGGEEESSSSCSGGGEEECCCTTCE
T ss_pred             ccCCHHHEEEecCCCCcCeEEEEECCCcc
Confidence                 89997533    359999999885

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.39  E-value=1.5e-13  Score=87.15  Aligned_cols=90  Identities=10%  Similarity=-0.006  Sum_probs=68.0

Q ss_pred             CCcchhhHHHHH---HHHhhCCCCcceeee-------eeee-c------------------cEEEEEecccccHHHHhcc
Q 034245            8 MEEVPSSMIREV---SCLMELNHPNIIRLM-------LVVS-Q------------------GLCLFLEYQANDLAYLLKY   58 (100)
Q Consensus         8 ~~~~~~~~~~e~---~~l~~l~h~~iv~l~-------~~~~-~------------------~~~lv~e~~~~~l~~~l~~   58 (100)
                      .......+.+|+   ..++.++||||++++       +++. .                  ..++++||+.|+|.+++..
T Consensus       113 ~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~  192 (377)
T 3byv_A          113 PSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEV  192 (377)
T ss_dssp             CTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHh
Confidence            334456788999   455666899999988       4443 1                  3899999999999999875


Q ss_pred             CCCCCC-------HHHHHHHHHHhH------------------hcccccCCCeEEEeecCCCCCC
Q 034245           59 PKDSMD-------GYSIKFSSSDSL------------------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        59 ~~~~~~-------~~~~~~~~~~~~------------------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                      ... ++       +..+..++.|++                  +||+++.++.+||+|||++...
T Consensus       193 ~~~-~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~  256 (377)
T 3byv_A          193 LLS-HSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRD  256 (377)
T ss_dssp             HHH-TTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEET
T ss_pred             ccc-cccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhheec
Confidence            321 33       366666777765                  8999999999999999998643

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.38  E-value=3.2e-12  Score=81.22  Aligned_cols=83  Identities=24%  Similarity=0.271  Sum_probs=68.6

Q ss_pred             hHHHHHHHHhhCCCCcceeeeeeee----------------------------------------ccEEEEEecccccHH
Q 034245           14 SMIREVSCLMELNHPNIIRLMLVVS----------------------------------------QGLCLFLEYQANDLA   53 (100)
Q Consensus        14 ~~~~e~~~l~~l~h~~iv~l~~~~~----------------------------------------~~~~lv~e~~~~~l~   53 (100)
                      ...+|+.+++.++||||+++++.+.                                        ...++++||++++|.
T Consensus        46 ~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~  125 (383)
T 3eb0_A           46 YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLH  125 (383)
T ss_dssp             SCCHHHHHHTTCCCTTBCCEEEEEEEC-------------------------------------CCEEEEEECCCSEEHH
T ss_pred             hHHHHHHHHHHcCCCCccchhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCCccHH
Confidence            3458999999999999999999884                                        238899999998777


Q ss_pred             HHhcc---CCCCCCHHHHHHHHHHhH------------------hccccc-CCCeEEEeecCCCC
Q 034245           54 YLLKY---PKDSMDGYSIKFSSSDSL------------------RCCLLS-FGKTVKVADLQALD   96 (100)
Q Consensus        54 ~~l~~---~~~~~~~~~~~~~~~~~~------------------~nil~~-~~~~~ki~dfgl~~   96 (100)
                      +.+..   ....++...+..++.|++                  +|++++ .++.+||+|||++.
T Consensus       126 ~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~  190 (383)
T 3eb0_A          126 KVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAK  190 (383)
T ss_dssp             HHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCE
T ss_pred             HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCc
Confidence            66653   233489999988888876                  899997 68999999999985

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.38  E-value=2.9e-12  Score=81.85  Aligned_cols=83  Identities=24%  Similarity=0.242  Sum_probs=67.3

Q ss_pred             HHHHHHHHhhCCCCcceeeeeeee--c------cEEEEEecccccHHHHhcc---CCCCCCHHHHHHHHHHhH-------
Q 034245           15 MIREVSCLMELNHPNIIRLMLVVS--Q------GLCLFLEYQANDLAYLLKY---PKDSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus        15 ~~~e~~~l~~l~h~~iv~l~~~~~--~------~~~lv~e~~~~~l~~~l~~---~~~~~~~~~~~~~~~~~~-------   76 (100)
                      ..+|+.+++.++||||+++++++.  .      .+++++||+++++...+..   ....++...+..++.|++       
T Consensus        79 ~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH  158 (394)
T 4e7w_A           79 KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH  158 (394)
T ss_dssp             CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            458999999999999999999986  2      2889999999665554432   233488999888888876       


Q ss_pred             -----------hccccc-CCCeEEEeecCCCCC
Q 034245           77 -----------RCCLLS-FGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----------~nil~~-~~~~~ki~dfgl~~~   97 (100)
                                 +||+++ .++.+||+|||++..
T Consensus       159 ~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~  191 (394)
T 4e7w_A          159 SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI  191 (394)
T ss_dssp             HTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             HCCccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence                       899998 789999999999853

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.38  E-value=7.4e-12  Score=78.57  Aligned_cols=90  Identities=19%  Similarity=0.183  Sum_probs=69.1

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee--cc-------EEEEEecccccHHHHhcc---CCCCCCHHHHHHHHHHhH
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS--QG-------LCLFLEYQANDLAYLLKY---PKDSMDGYSIKFSSSDSL   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~-------~~lv~e~~~~~l~~~l~~---~~~~~~~~~~~~~~~~~~   76 (100)
                      ........+++..++.++||||+++++.+.  ..       .++++||+++++...+..   ....++...+..++.|++
T Consensus        60 ~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~  139 (360)
T 3e3p_A           60 PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLI  139 (360)
T ss_dssp             TTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHH
T ss_pred             ccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHH
Confidence            334456778888889999999999999986  22       889999999666554432   223478888877777754


Q ss_pred             --------------------hcccccC-CCeEEEeecCCCCCC
Q 034245           77 --------------------RCCLLSF-GKTVKVADLQALDWP   98 (100)
Q Consensus        77 --------------------~nil~~~-~~~~ki~dfgl~~~~   98 (100)
                                          +||+++. ++.+||+|||++...
T Consensus       140 ~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~  182 (360)
T 3e3p_A          140 RSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKL  182 (360)
T ss_dssp             HHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCC
T ss_pred             HHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceec
Confidence                                8999986 899999999998653

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.38  E-value=4.9e-12  Score=77.84  Aligned_cols=85  Identities=15%  Similarity=0.108  Sum_probs=71.7

Q ss_pred             hhHHHHHHHH-hhCCCCcceeeeeeee------ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH-------
Q 034245           13 SSMIREVSCL-MELNHPNIIRLMLVVS------QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus        13 ~~~~~e~~~l-~~l~h~~iv~l~~~~~------~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~-------   76 (100)
                      ..+.+|+..+ +..+|||++++++.+.      ...++++||++ ++|.+++.... .+++...+..++.|++       
T Consensus        55 ~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH  134 (299)
T 3m2w_A           55 PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH  134 (299)
T ss_dssp             HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            4578899987 6679999999999875      56899999999 89999997654 3489999998888876       


Q ss_pred             -----------hcccccC---CCeEEEeecCCCCC
Q 034245           77 -----------RCCLLSF---GKTVKVADLQALDW   97 (100)
Q Consensus        77 -----------~nil~~~---~~~~ki~dfgl~~~   97 (100)
                                 +||+++.   ++.+|++|||++..
T Consensus       135 ~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~  169 (299)
T 3m2w_A          135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE  169 (299)
T ss_dssp             HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred             hCCcccCCCCHHHEEEecCCCCCcEEEeccccccc
Confidence                       8999987   78999999999854

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.37  E-value=7.1e-12  Score=77.83  Aligned_cols=82  Identities=23%  Similarity=0.370  Sum_probs=70.7

Q ss_pred             chhhHHHHHHHHhhCC-CCcceeeeeeee----ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH--------
Q 034245           11 VPSSMIREVSCLMELN-HPNIIRLMLVVS----QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~-h~~iv~l~~~~~----~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~--------   76 (100)
                      ....+.+|+.+++.++ |||++++++++.    ...++++|+++ +++.+.+..    ++...+..++.|++        
T Consensus        73 ~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH~  148 (330)
T 3nsz_A           73 KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHS  148 (330)
T ss_dssp             CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHHh
Confidence            3567899999999996 999999999987    56899999999 999888753    77888888888866        


Q ss_pred             ----------hcccccCCC-eEEEeecCCCC
Q 034245           77 ----------RCCLLSFGK-TVKVADLQALD   96 (100)
Q Consensus        77 ----------~nil~~~~~-~~ki~dfgl~~   96 (100)
                                +||+++.++ .+||+|||++.
T Consensus       149 ~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~  179 (330)
T 3nsz_A          149 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE  179 (330)
T ss_dssp             TTEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             CCeeeCCCCHHHEEEcCCCCEEEEEeCCCce
Confidence                      899999766 99999999985

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.37  E-value=1.3e-12  Score=88.44  Aligned_cols=83  Identities=19%  Similarity=0.211  Sum_probs=68.0

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--cc-----EEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QG-----LCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~-----~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------   76 (100)
                      ....+.+|+.+++.++||||+++++++.  +.     .|+++||++ ++|.+.+..   .+++..+..++.|++      
T Consensus       122 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~l  198 (681)
T 2pzi_A          122 AQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYL  198 (681)
T ss_dssp             HHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHH
Confidence            3456889999999999999999999988  33     699999999 888877654   489999998988876      


Q ss_pred             ------------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                  +||+++.+ .+||+|||++..
T Consensus       199 H~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~  230 (681)
T 2pzi_A          199 HSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSR  230 (681)
T ss_dssp             HHTTEECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred             HHCCCeecccChHHeEEeCC-cEEEEecccchh
Confidence                        89999875 899999998854

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.37  E-value=2.5e-12  Score=80.28  Aligned_cols=86  Identities=16%  Similarity=0.069  Sum_probs=67.1

Q ss_pred             cchhhHHHHHHHHhhCC---------CCcceeeeeee-------------------------------e-ccEEEEEecc
Q 034245           10 EVPSSMIREVSCLMELN---------HPNIIRLMLVV-------------------------------S-QGLCLFLEYQ   48 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~---------h~~iv~l~~~~-------------------------------~-~~~~lv~e~~   48 (100)
                      .....+.+|+.+++.++         |||++++.+++                               . ...++++||+
T Consensus        65 ~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~  144 (336)
T 2vuw_A           65 KTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFE  144 (336)
T ss_dssp             BCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEE
T ss_pred             hhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEec
Confidence            34477889999998885         77777766553                               1 5789999999


Q ss_pred             c-ccHHHHhccCCCCCCHHHHHHHHHHhH-------------------hcccccCCC--------------------eEE
Q 034245           49 A-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------------------RCCLLSFGK--------------------TVK   88 (100)
Q Consensus        49 ~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------------~nil~~~~~--------------------~~k   88 (100)
                      + |++.+.+..  ..+++..+..++.|++                   +||+++.++                    .+|
T Consensus       145 ~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vk  222 (336)
T 2vuw_A          145 FGGIDLEQMRT--KLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVS  222 (336)
T ss_dssp             CCCEETGGGTT--TCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEE
T ss_pred             CCCccHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEE
Confidence            8 876666644  2388999988888865                   899999876                    999


Q ss_pred             EeecCCCCC
Q 034245           89 VADLQALDW   97 (100)
Q Consensus        89 i~dfgl~~~   97 (100)
                      |+|||+|..
T Consensus       223 L~DFG~a~~  231 (336)
T 2vuw_A          223 IIDYTLSRL  231 (336)
T ss_dssp             ECCCTTCBE
T ss_pred             EeeccccEe
Confidence            999999864

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.36  E-value=7.4e-12  Score=78.02  Aligned_cols=83  Identities=20%  Similarity=0.188  Sum_probs=70.3

Q ss_pred             hhhHHHHHHHHhh--CCCCcceeeeeeee--c----cEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------
Q 034245           12 PSSMIREVSCLME--LNHPNIIRLMLVVS--Q----GLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~--l~h~~iv~l~~~~~--~----~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------   76 (100)
                      ...+.+|.+++..  ++|||++++++.+.  .    ..++++||++ ++|.+++...  ++++..+..++.|++      
T Consensus        78 ~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~l  155 (342)
T 1b6c_B           78 ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHL  155 (342)
T ss_dssp             HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHH
Confidence            3567889998887  78999999999988  3    7899999999 8999999764  378888777776654      


Q ss_pred             --------------------hcccccCCCeEEEeecCCCC
Q 034245           77 --------------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 --------------------~nil~~~~~~~ki~dfgl~~   96 (100)
                                          +||+++.++.+||+|||++.
T Consensus       156 H~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~  195 (342)
T 1b6c_B          156 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  195 (342)
T ss_dssp             HCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             HHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCce
Confidence                                79999999999999999874

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.35  E-value=1.5e-12  Score=84.21  Aligned_cols=85  Identities=22%  Similarity=0.152  Sum_probs=66.6

Q ss_pred             hhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           13 SSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ..+.+|+.+++.+ +||||+++++.+.  ...|+++|+++++|.+.+...........+..++.|++             
T Consensus        62 ~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH  141 (432)
T 3p23_A           62 SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVH  141 (432)
T ss_dssp             EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCCCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEe
Confidence            4578999999999 8999999999988  78899999999999999877654344434445555654             


Q ss_pred             -----hcccccC-----CCeEEEeecCCCCC
Q 034245           77 -----RCCLLSF-----GKTVKVADLQALDW   97 (100)
Q Consensus        77 -----~nil~~~-----~~~~ki~dfgl~~~   97 (100)
                           +||++..     ...+||+|||++..
T Consensus       142 rDlKp~NIll~~~~~~~~~~~kL~DFG~a~~  172 (432)
T 3p23_A          142 RDLKPHNILISMPNAHGKIKAMISDFGLCKK  172 (432)
T ss_dssp             CCCSTTSEEECCCBTTTBCCEEECCTTEEEC
T ss_pred             CCCCHHHEEEecCCCCCceeEEEecccceee
Confidence                 8999953     23688999998754

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.35  E-value=7e-12  Score=80.67  Aligned_cols=84  Identities=21%  Similarity=0.252  Sum_probs=67.3

Q ss_pred             hHHHHHHHHhhCCCCcceeeeeeee--------ccEEEEEecccccHHHHhcc---CCCCCCHHHHHHHHHHhH------
Q 034245           14 SMIREVSCLMELNHPNIIRLMLVVS--------QGLCLFLEYQANDLAYLLKY---PKDSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        14 ~~~~e~~~l~~l~h~~iv~l~~~~~--------~~~~lv~e~~~~~l~~~l~~---~~~~~~~~~~~~~~~~~~------   76 (100)
                      ...+|+.+++.++||||+++++++.        ..+++++||+++++...+..   ....++...+..++.|++      
T Consensus        93 ~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~L  172 (420)
T 1j1b_A           93 FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI  172 (420)
T ss_dssp             SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence            3558999999999999999998875        23779999999776665542   234488988888888876      


Q ss_pred             ------------hcccccCC-CeEEEeecCCCCC
Q 034245           77 ------------RCCLLSFG-KTVKVADLQALDW   97 (100)
Q Consensus        77 ------------~nil~~~~-~~~ki~dfgl~~~   97 (100)
                                  +||+++.+ +.+||+|||++..
T Consensus       173 H~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~  206 (420)
T 1j1b_A          173 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ  206 (420)
T ss_dssp             HTTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             HHCCccccCCChhhEEEeCCCCeEEeccchhhhh
Confidence                        89999954 6889999999853

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.35  E-value=5.8e-12  Score=81.27  Aligned_cols=86  Identities=21%  Similarity=0.255  Sum_probs=72.0

Q ss_pred             hhhHHHHHHHHhhC------CCCcceeeeeeee--ccEEEEEecccccHHHHhccCC-CCCCHHHHHHHHHHhH------
Q 034245           12 PSSMIREVSCLMEL------NHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPK-DSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l------~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~------   76 (100)
                      ...+.+|+.+++.+      .|+|++++++.+.  ...++++|++.+++.+.+.... .++++..+..++.|++      
T Consensus       137 ~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~L  216 (429)
T 3kvw_A          137 HRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDAL  216 (429)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            45677888888776      5779999999988  8899999999988988887654 3489999988888876      


Q ss_pred             ------------hcccccCCCe--EEEeecCCCCC
Q 034245           77 ------------RCCLLSFGKT--VKVADLQALDW   97 (100)
Q Consensus        77 ------------~nil~~~~~~--~ki~dfgl~~~   97 (100)
                                  +||+++.++.  +||+|||++..
T Consensus       217 H~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~  251 (429)
T 3kvw_A          217 HKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY  251 (429)
T ss_dssp             HHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred             HHCCeecCCCCHHHeEEccCCCcceEEeeccccee
Confidence                        8999998876  99999999853

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.34  E-value=1.1e-11  Score=76.97  Aligned_cols=86  Identities=12%  Similarity=0.185  Sum_probs=69.0

Q ss_pred             hhhHHHHHH-HHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhcc----CCCCCCHHHHHHHHHHhH--------
Q 034245           12 PSSMIREVS-CLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKY----PKDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus        12 ~~~~~~e~~-~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~----~~~~~~~~~~~~~~~~~~--------   76 (100)
                      ...+.+|+. +++.++||||+++++.+.  +..++++||+++++.+.+..    ....++...+..++.|++        
T Consensus        64 ~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~  143 (327)
T 3aln_A           64 QKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE  143 (327)
T ss_dssp             HHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc
Confidence            345666666 677789999999999998  88999999999877776652    233478888877777754        


Q ss_pred             -----------hcccccCCCeEEEeecCCCCC
Q 034245           77 -----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                 +||+++.++.+||+|||++..
T Consensus       144 ~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~  175 (327)
T 3aln_A          144 NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQ  175 (327)
T ss_dssp             HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred             cCCEeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence                       799999999999999999864

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.33  E-value=2.4e-12  Score=80.88  Aligned_cols=85  Identities=14%  Similarity=0.051  Sum_probs=71.3

Q ss_pred             hhHHHHHHHHhhCCCCccee---------------eeeeee---ccEEEEEecccccHHHHhccC-CCCCCHHHHHHHHH
Q 034245           13 SSMIREVSCLMELNHPNIIR---------------LMLVVS---QGLCLFLEYQANDLAYLLKYP-KDSMDGYSIKFSSS   73 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~---------------l~~~~~---~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~~~~   73 (100)
                      ..+.+|+.+++.++|||+++               +++.+.   ...++++||+.++|.+++... ...+++..+..++.
T Consensus        87 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~  166 (352)
T 2jii_A           87 GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVAC  166 (352)
T ss_dssp             STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHH
T ss_pred             chHHHHHHHHHHhcccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHH
Confidence            45889999999999999998               344444   678999999989999999865 23489999999988


Q ss_pred             HhH------------------hcccccCCC--eEEEeecCCCCC
Q 034245           74 DSL------------------RCCLLSFGK--TVKVADLQALDW   97 (100)
Q Consensus        74 ~~~------------------~nil~~~~~--~~ki~dfgl~~~   97 (100)
                      |++                  +||+++.++  .+||+|||++..
T Consensus       167 qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~  210 (352)
T 2jii_A          167 RLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFR  210 (352)
T ss_dssp             HHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBC
T ss_pred             HHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceee
Confidence            876                  899999888  999999999853

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.33  E-value=6.8e-12  Score=77.53  Aligned_cols=86  Identities=26%  Similarity=0.240  Sum_probs=72.1

Q ss_pred             cchhhHHHHHHHHhhCC--CCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245           10 EVPSSMIREVSCLMELN--HPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~--h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      .....+.+|+..++.++  |||++++++.+.  ...++++|+..++|.+++.... .++...+..++.|++         
T Consensus        68 ~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~  146 (313)
T 3cek_A           68 QTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH  146 (313)
T ss_dssp             HHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEECCCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            34567889999999996  599999999988  8889999955599999998765 388888888888866         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               +||+++ ++.+|++|||++..
T Consensus       147 ~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~  175 (313)
T 3cek_A          147 GIVHSDLKPANFLIV-DGMLKLIDFGIANQ  175 (313)
T ss_dssp             TCCCCCCCGGGEEEE-TTEEEECCCSSSCC
T ss_pred             CceecCCCcccEEEE-CCeEEEeecccccc
Confidence                     899995 58999999999864

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.32  E-value=1.3e-11  Score=75.37  Aligned_cols=84  Identities=11%  Similarity=0.075  Sum_probs=72.2

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee---ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS---QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~---~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ..+.+|+.+++.++|++++.....+.   ...++++|++.++|.+++.....+++...+..++.|++             
T Consensus        49 ~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH  128 (296)
T 4hgt_A           49 PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIH  128 (296)
T ss_dssp             CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence            46889999999999888888776665   77899999999999999886555589999999988876             


Q ss_pred             -----hcccc---cCCCeEEEeecCCCC
Q 034245           77 -----RCCLL---SFGKTVKVADLQALD   96 (100)
Q Consensus        77 -----~nil~---~~~~~~ki~dfgl~~   96 (100)
                           +||++   +.++.+||+|||++.
T Consensus       129 ~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~  156 (296)
T 4hgt_A          129 RDVKPDNFLMGLGKKGNLVYIIDFGLAK  156 (296)
T ss_dssp             SCCSGGGEEECCGGGTTCEEECCCTTCE
T ss_pred             CCCCHHHeeeeccCCCCeEEEecCccce
Confidence                 89999   788999999999885

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.31  E-value=8.3e-12  Score=77.05  Aligned_cols=82  Identities=12%  Similarity=0.061  Sum_probs=63.9

Q ss_pred             HHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-----------------
Q 034245           16 IREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-----------------   76 (100)
Q Consensus        16 ~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------------   76 (100)
                      ..+..+++.++|||++++++.+.  ...++++|++.+.+..........++...+..++.|++                 
T Consensus        72 ~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl  151 (318)
T 2dyl_A           72 MDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDV  151 (318)
T ss_dssp             HHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_pred             HHHHHHHHhcCCCceeeEEEEEecCCcEEEEEeccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCC
Confidence            33445678889999999999998  88999999997555555544334488888877777755                 


Q ss_pred             --hcccccCCCeEEEeecCCCCC
Q 034245           77 --RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --~nil~~~~~~~ki~dfgl~~~   97 (100)
                        +||+++.++.+||+|||++..
T Consensus       152 kp~Nil~~~~~~~kl~dfg~~~~  174 (318)
T 2dyl_A          152 KPSNILLDERGQIKLCDFGISGR  174 (318)
T ss_dssp             CGGGEEECTTSCEEECCCTTC--
T ss_pred             CHHHEEECCCCCEEEEECCCchh
Confidence              899999999999999998854

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.31  E-value=4.8e-12  Score=78.12  Aligned_cols=85  Identities=20%  Similarity=0.219  Sum_probs=70.0

Q ss_pred             hhhHHHHHHHHhhC----CCCcceeeeeeee--ccEEEEEec-cc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------
Q 034245           12 PSSMIREVSCLMEL----NHPNIIRLMLVVS--QGLCLFLEY-QA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l----~h~~iv~l~~~~~--~~~~lv~e~-~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------   76 (100)
                      ...+.+|+..+..+    +|||++++++.+.  ...++++|+ +. ++|.+++.... ++++..+..++.|++       
T Consensus        78 ~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH  156 (312)
T 2iwi_A           78 SVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCH  156 (312)
T ss_dssp             -CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            34577899999888    8999999999988  788999999 67 99999987654 389999888888866       


Q ss_pred             -----------hccccc-CCCeEEEeecCCCCC
Q 034245           77 -----------RCCLLS-FGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----------~nil~~-~~~~~ki~dfgl~~~   97 (100)
                                 +||+++ .++.+|++|||++..
T Consensus       157 ~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~  189 (312)
T 2iwi_A          157 SRGVVHRDIKDENILIDLRRGCAKLIDFGSGAL  189 (312)
T ss_dssp             HHTEECCCCSGGGEEEETTTTEEEECCCSSCEE
T ss_pred             HCCeeecCCChhhEEEeCCCCeEEEEEcchhhh
Confidence                       899998 789999999998753

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.30  E-value=2.3e-11  Score=75.57  Aligned_cols=82  Identities=24%  Similarity=0.265  Sum_probs=66.9

Q ss_pred             hhHHHHHHHHhhC--CCCcceeeeeeee------ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------
Q 034245           13 SSMIREVSCLMEL--NHPNIIRLMLVVS------QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l--~h~~iv~l~~~~~------~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------   76 (100)
                      ....+|.+++...  +|||++++++.+.      ...++++||++ ++|.++++...  +++..+..++.|++       
T Consensus        74 ~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~~i~~~l~~lH  151 (337)
T 3mdy_A           74 ASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT--LDAKSMLKLAYSSVSGLCHLH  151 (337)
T ss_dssp             HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH
T ss_pred             chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhccC--CCHHHHHHHHHHHHHHHHHHH
Confidence            3455666666554  8999999999887      36899999999 89999997653  78888877777654       


Q ss_pred             -------------------hcccccCCCeEEEeecCCCC
Q 034245           77 -------------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -------------------~nil~~~~~~~ki~dfgl~~   96 (100)
                                         +||+++.++.+||+|||++.
T Consensus       152 ~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~  190 (337)
T 3mdy_A          152 TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  190 (337)
T ss_dssp             SCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             HhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCce
Confidence                               78899999999999999984

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.30  E-value=2.5e-11  Score=74.21  Aligned_cols=85  Identities=11%  Similarity=0.071  Sum_probs=71.8

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee---ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS---QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~---~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++|++++.....+.   ...++++||+.++|.+++.....+++...+..++.|++            
T Consensus        48 ~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iv  127 (296)
T 3uzp_A           48 HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFI  127 (296)
T ss_dssp             CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEecCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            356889999999999988777766665   77899999999999999875555689999998888876            


Q ss_pred             ------hccccc---CCCeEEEeecCCCC
Q 034245           77 ------RCCLLS---FGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~---~~~~~ki~dfgl~~   96 (100)
                            +||+++   .++.+||+|||++.
T Consensus       128 H~dlkp~NIl~~~~~~~~~~kl~Dfg~~~  156 (296)
T 3uzp_A          128 HRDVKPDNFLMGLGKKGNLVYIIDFGLAK  156 (296)
T ss_dssp             CSCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred             eCCCCHHHeEEecCCCCCeEEEeeCCCcc
Confidence                  899994   78899999999875

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.29  E-value=7.8e-11  Score=72.39  Aligned_cols=82  Identities=13%  Similarity=0.102  Sum_probs=69.4

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+..++.++||||+++++++.  +..|+++||++ ++|.+++...   .....+..++.|++            
T Consensus        75 ~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH~~giv  151 (286)
T 3uqc_A           75 LQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAHRAGVA  151 (286)
T ss_dssp             HHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHCCCc
Confidence            467899999999999999999999998  88999999999 9999998542   45556677777765            


Q ss_pred             ------hcccccCCCeEEEeecCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~   96 (100)
                            +||+++.++.+|++++|...
T Consensus       152 H~Dikp~NIll~~~g~~kl~~~~~~~  177 (286)
T 3uqc_A          152 LSIDHPSRVRVSIDGDVVLAYPATMP  177 (286)
T ss_dssp             CCCCSGGGEEEETTSCEEECSCCCCT
T ss_pred             cCCCCcccEEEcCCCCEEEEeccccC
Confidence                  89999999999999776543

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.27  E-value=1.6e-11  Score=76.35  Aligned_cols=82  Identities=21%  Similarity=0.180  Sum_probs=63.6

Q ss_pred             hhHHHHHHH--HhhCCCCcceeeeeeee-------ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------
Q 034245           13 SSMIREVSC--LMELNHPNIIRLMLVVS-------QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        13 ~~~~~e~~~--l~~l~h~~iv~l~~~~~-------~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------   76 (100)
                      ..+.+|..+  +..++|||++++++.+.       ...++++||++ ++|.+++....  .++..+..++.|++      
T Consensus        50 ~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~L  127 (336)
T 3g2f_A           50 QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYL  127 (336)
T ss_dssp             HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHH
Confidence            344445554  44589999999987554       35789999998 99999997654  57777766766654      


Q ss_pred             ---------------------hcccccCCCeEEEeecCCCC
Q 034245           77 ---------------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ---------------------~nil~~~~~~~ki~dfgl~~   96 (100)
                                           +||+++.++.+||+|||++.
T Consensus       128 H~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~  168 (336)
T 3g2f_A          128 HTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSM  168 (336)
T ss_dssp             HCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCE
T ss_pred             HhhhccccccccceeecccccceEEEcCCCcEEEeecccee
Confidence                                 68899999999999999984

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.27  E-value=1.7e-11  Score=75.99  Aligned_cols=87  Identities=14%  Similarity=0.151  Sum_probs=71.6

Q ss_pred             chhhHHHHHHHHhhCCCCc------ceeeeeeee--ccEEEEEecccccHHHHhccCC-CCCCHHHHHHHHHHhH-----
Q 034245           11 VPSSMIREVSCLMELNHPN------IIRLMLVVS--QGLCLFLEYQANDLAYLLKYPK-DSMDGYSIKFSSSDSL-----   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~------iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~-----   76 (100)
                      ....+.+|+.+++.++|++      ++++++.+.  +..++++|++.+++.+.+.... .+++...+..++.|++     
T Consensus        54 ~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~  133 (339)
T 1z57_A           54 YCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNF  133 (339)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHH
Confidence            3456888999998886654      899999888  8899999999988998887654 2478888888888876     


Q ss_pred             -------------hcccccC-------------------CCeEEEeecCCCCC
Q 034245           77 -------------RCCLLSF-------------------GKTVKVADLQALDW   97 (100)
Q Consensus        77 -------------~nil~~~-------------------~~~~ki~dfgl~~~   97 (100)
                                   +||++..                   ++.+|++|||++..
T Consensus       134 lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~  186 (339)
T 1z57_A          134 LHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY  186 (339)
T ss_dssp             HHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEE
T ss_pred             HHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCccccc
Confidence                         8999986                   66799999998754

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.25  E-value=2.4e-11  Score=78.50  Aligned_cols=85  Identities=21%  Similarity=0.185  Sum_probs=63.9

Q ss_pred             hhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCC------CHHHHHHHHHHhH-------
Q 034245           13 SSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSM------DGYSIKFSSSDSL-------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~------~~~~~~~~~~~~~-------   76 (100)
                      ..+.+|+.+++++ +||||+++++.+.  ...++++|++.++|.+++.......      +...+..++.|++       
T Consensus        53 ~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH  132 (434)
T 2rio_A           53 DIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH  132 (434)
T ss_dssp             HHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH
Confidence            4578999999876 8999999999988  8899999999999999987654211      1112344555554       


Q ss_pred             -----------hcccccCC-------------CeEEEeecCCCCC
Q 034245           77 -----------RCCLLSFG-------------KTVKVADLQALDW   97 (100)
Q Consensus        77 -----------~nil~~~~-------------~~~ki~dfgl~~~   97 (100)
                                 +||+++..             +.+||+|||++..
T Consensus       133 ~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~  177 (434)
T 2rio_A          133 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK  177 (434)
T ss_dssp             HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEE
T ss_pred             HCCccccCCChHhEEEecCcccccccccCCCceEEEEccccccee
Confidence                       89999654             4899999998853

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.24  E-value=2.6e-11  Score=75.71  Aligned_cols=88  Identities=11%  Similarity=0.166  Sum_probs=70.9

Q ss_pred             cchhhHHHHHHHHhhCCCCc------ceeeeeeee--ccEEEEEecccccHHHHhccCC-CCCCHHHHHHHHHHhH----
Q 034245           10 EVPSSMIREVSCLMELNHPN------IIRLMLVVS--QGLCLFLEYQANDLAYLLKYPK-DSMDGYSIKFSSSDSL----   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~------iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~----   76 (100)
                      .....+.+|+.+++.++|++      ++.+.+.+.  ...++++|++.+++.+.+.... .+++...+..++.|++    
T Consensus        58 ~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~  137 (355)
T 2eu9_A           58 KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALR  137 (355)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHH
Confidence            33566888999999887665      888888877  8899999999977777765543 3489999998988876    


Q ss_pred             --------------hcccc-------------------cCCCeEEEeecCCCCC
Q 034245           77 --------------RCCLL-------------------SFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------------~nil~-------------------~~~~~~ki~dfgl~~~   97 (100)
                                    +||++                   ..++.+||+|||++..
T Consensus       138 ~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~  191 (355)
T 2eu9_A          138 FLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF  191 (355)
T ss_dssp             HHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEE
T ss_pred             HHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCcccc
Confidence                          89999                   5678999999998853

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.24  E-value=1.2e-11  Score=83.77  Aligned_cols=87  Identities=24%  Similarity=0.215  Sum_probs=71.4

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--------ccEEEEEeccc-ccHHHHhccCCC--CCCHHHHHHHHHHhH---
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--------QGLCLFLEYQA-NDLAYLLKYPKD--SMDGYSIKFSSSDSL---   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--------~~~~lv~e~~~-~~l~~~l~~~~~--~~~~~~~~~~~~~~~---   76 (100)
                      ....+.+|+.+++.++||||+++++++.        ...++++||++ ++|.+++.....  ++++..+..++.|++   
T Consensus        55 ~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL  134 (676)
T 3qa8_A           55 NRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSAL  134 (676)
T ss_dssp             HHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHH
Confidence            3456889999999999999999988754        56789999998 999999976442  377777888877765   


Q ss_pred             ---------------hcccccCCC---eEEEeecCCCCC
Q 034245           77 ---------------RCCLLSFGK---TVKVADLQALDW   97 (100)
Q Consensus        77 ---------------~nil~~~~~---~~ki~dfgl~~~   97 (100)
                                     +||+++.++   .+|++|||++..
T Consensus       135 ~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~  173 (676)
T 3qa8_A          135 RYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE  173 (676)
T ss_dssp             HHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCB
T ss_pred             HHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccccc
Confidence                           899998655   499999999865

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.23  E-value=8.1e-12  Score=82.82  Aligned_cols=75  Identities=9%  Similarity=-0.025  Sum_probs=59.1

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      +.+.+|+.++++++|||++++...+.  ...++++||++ ++|.+++..         ...++.|++             
T Consensus       384 ~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~gIiH  454 (540)
T 3en9_A          384 SRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIED---------NLDIAYKIGEIVGKLHKNDVIH  454 (540)
T ss_dssp             HHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHHCcCcc
Confidence            45789999999999999995544444  77799999999 999999876         122333332             


Q ss_pred             -----hcccccCCCeEEEeecCCCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~~~   98 (100)
                           +||+++.  .+||+|||++...
T Consensus       455 rDiKp~NILl~~--~~kL~DFGla~~~  479 (540)
T 3en9_A          455 NDLTTSNFIFDK--DLYIIDFGLGKIS  479 (540)
T ss_dssp             TTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred             CCCCHHHEEECC--eEEEEECccCEEC
Confidence                 8999988  9999999998653

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.23  E-value=3.3e-11  Score=74.88  Aligned_cols=84  Identities=18%  Similarity=0.165  Sum_probs=72.2

Q ss_pred             hhHHHHHHHHhhCC--CCcceeeeeeee--ccEEEEEeccc--ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           13 SSMIREVSCLMELN--HPNIIRLMLVVS--QGLCLFLEYQA--NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~--h~~iv~l~~~~~--~~~~lv~e~~~--~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      ..+.+|+.+++.+.  |+|++++++.+.  ...++++|++.  ++|.+++.... .++...+..++.|++          
T Consensus        91 ~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH~~~  169 (320)
T 3a99_A           91 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCG  169 (320)
T ss_dssp             CEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            56788999999996  599999999998  88899999986  88999987654 388888888888866          


Q ss_pred             --------hccccc-CCCeEEEeecCCCCC
Q 034245           77 --------RCCLLS-FGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~-~~~~~ki~dfgl~~~   97 (100)
                              +||+++ .++.+||+|||++..
T Consensus       170 ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~  199 (320)
T 3a99_A          170 VLHRDIKDENILIDLNRGELKLIDFGSGAL  199 (320)
T ss_dssp             EECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             cEeCCCCHHHEEEeCCCCCEEEeeCccccc
Confidence                    899998 779999999998753

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.23  E-value=1e-10  Score=76.71  Aligned_cols=84  Identities=11%  Similarity=0.078  Sum_probs=69.0

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeee-e--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVV-S--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~-~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ..+.+|+.+++.++|++.+.....+ .  ...++++||+.++|.+++......+++..+..++.|++             
T Consensus        47 ~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvH  126 (483)
T 3sv0_A           47 PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH  126 (483)
T ss_dssp             CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence            4688999999999876555444443 3  77899999999999999986555699999999988876             


Q ss_pred             -----hcccc---cCCCeEEEeecCCCC
Q 034245           77 -----RCCLL---SFGKTVKVADLQALD   96 (100)
Q Consensus        77 -----~nil~---~~~~~~ki~dfgl~~   96 (100)
                           +||++   ..++.+||+|||++.
T Consensus       127 rDIKP~NILl~~~~~~~~vkL~DFGla~  154 (483)
T 3sv0_A          127 RDIKPDNFLMGLGRRANQVYIIDFGLAK  154 (483)
T ss_dssp             CCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred             cccCcceEEEecCCCCCeEEEEeCCcce
Confidence                 89999   578999999999985

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.20  E-value=4.4e-11  Score=75.70  Aligned_cols=76  Identities=14%  Similarity=0.200  Sum_probs=59.5

Q ss_pred             cchhhHHHHHHHHhhCC--------CCcceeeeeeee------ccEEEEEecccccHHHHhccC-CCCCCHHHHHHHHHH
Q 034245           10 EVPSSMIREVSCLMELN--------HPNIIRLMLVVS------QGLCLFLEYQANDLAYLLKYP-KDSMDGYSIKFSSSD   74 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~--------h~~iv~l~~~~~------~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~~~~~   74 (100)
                      .....+.+|+.+++.++        |+|++++++.+.      ...++++|++.+++.+.+... ..+++...+..++.|
T Consensus        75 ~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~q  154 (397)
T 1wak_A           75 HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQ  154 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHH
Confidence            34567889999999885        788999999876      578999999996666665443 345899998888888


Q ss_pred             hH-------------------hcccccCCC
Q 034245           75 SL-------------------RCCLLSFGK   85 (100)
Q Consensus        75 ~~-------------------~nil~~~~~   85 (100)
                      ++                   +||+++.++
T Consensus       155 i~~aL~~lH~~~givHrDikp~NIll~~~~  184 (397)
T 1wak_A          155 VLQGLDYLHTKCRIIHTDIKPENILLSVNE  184 (397)
T ss_dssp             HHHHHHHHHHTTCEECCCCSGGGEEECCCH
T ss_pred             HHHHHHHHHHhCCEecCCCCHHHeeEeccc
Confidence            66                   789998664

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.19  E-value=5.7e-12  Score=79.71  Aligned_cols=86  Identities=13%  Similarity=0.035  Sum_probs=51.7

Q ss_pred             hhhHHHHH---HHHhhCCCCcceeee-------eeee-------------------ccEEEEEecccccHHHHhccCCCC
Q 034245           12 PSSMIREV---SCLMELNHPNIIRLM-------LVVS-------------------QGLCLFLEYQANDLAYLLKYPKDS   62 (100)
Q Consensus        12 ~~~~~~e~---~~l~~l~h~~iv~l~-------~~~~-------------------~~~~lv~e~~~~~l~~~l~~~~~~   62 (100)
                      ...+.+|+   ..++. +|||+++++       +.+.                   ...++++||++++|.+++......
T Consensus       106 ~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~  184 (371)
T 3q60_A          106 LERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFV  184 (371)
T ss_dssp             HHHHHHHHHHHHHHHC-----------CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhccc
Confidence            34566775   45555 799988754       3332                   227999999999999998764322


Q ss_pred             CCHHHH------HHHHHHhH------------------hcccccCCCeEEEeecCCCCCC
Q 034245           63 MDGYSI------KFSSSDSL------------------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        63 ~~~~~~------~~~~~~~~------------------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                      +.....      ..++.|++                  +||+++.++.+||+|||++...
T Consensus       185 ~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~  244 (371)
T 3q60_A          185 YVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKV  244 (371)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGEEET
T ss_pred             cchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEecceeeec
Confidence            332222      33335544                  8999999999999999998643

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.18  E-value=9.3e-11  Score=74.44  Aligned_cols=86  Identities=21%  Similarity=0.185  Sum_probs=69.5

Q ss_pred             hhhHHHHHHHHhhCC-CC-----cceeeeeeee--ccEEEEEecccccHHHHhccCC-CCCCHHHHHHHHHHhH------
Q 034245           12 PSSMIREVSCLMELN-HP-----NIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPK-DSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~-h~-----~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~------   76 (100)
                      ...+.+|+.+++.+. |+     +++++.+.+.  ...++++|+++++|.+.+.... .++++..+..++.|++      
T Consensus        94 ~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~l  173 (382)
T 2vx3_A           94 LNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL  173 (382)
T ss_dssp             HHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHh
Confidence            456778888888774 55     4888888888  8899999999999999987654 3488888888888765      


Q ss_pred             --------------hccccc--CCCeEEEeecCCCCC
Q 034245           77 --------------RCCLLS--FGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------------~nil~~--~~~~~ki~dfgl~~~   97 (100)
                                    +||++.  .++.+||+|||++..
T Consensus       174 H~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~  210 (382)
T 2vx3_A          174 ATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ  210 (382)
T ss_dssp             TSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred             ccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCcee
Confidence                          899995  467899999999854

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.16  E-value=3.8e-10  Score=70.58  Aligned_cols=83  Identities=14%  Similarity=0.103  Sum_probs=65.8

Q ss_pred             HHHHHH-HHhhCCCCcceeeeeeee------ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH---------
Q 034245           15 MIREVS-CLMELNHPNIIRLMLVVS------QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus        15 ~~~e~~-~l~~l~h~~iv~l~~~~~------~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~---------   76 (100)
                      ..+|+. .++.++|||++++++++.      ...++++||++ ++|.+++.... ..+++..+..++.|++         
T Consensus        68 ~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~  147 (336)
T 3fhr_A           68 ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH  147 (336)
T ss_dssp             HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            334444 456679999999999886      34899999999 89999998754 2489999999988876         


Q ss_pred             ---------hcccccC---CCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSF---GKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~---~~~~ki~dfgl~~~   97 (100)
                               +||+++.   ++.+||+|||++..
T Consensus       148 ~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~  180 (336)
T 3fhr_A          148 NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE  180 (336)
T ss_dssp             TEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred             CeecCCCCHHHEEEEecCCCceEEEecccccee
Confidence                     8999975   45699999998853

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.09  E-value=1.5e-10  Score=72.84  Aligned_cols=87  Identities=21%  Similarity=0.247  Sum_probs=69.4

Q ss_pred             chhhHHHHHHHHhhCC-----------CCcceeeeeeee--c----cEEEEEecccccHHHHhccCC-CCCCHHHHHHHH
Q 034245           11 VPSSMIREVSCLMELN-----------HPNIIRLMLVVS--Q----GLCLFLEYQANDLAYLLKYPK-DSMDGYSIKFSS   72 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~-----------h~~iv~l~~~~~--~----~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~   72 (100)
                      ....+.+|+.+++.+.           |||++++++.+.  .    ..++++|++.++|.+.+.... .+++...+..++
T Consensus        58 ~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~  137 (373)
T 1q8y_A           58 YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQIS  137 (373)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHH
T ss_pred             chhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHH
Confidence            3456788999998876           889999999987  2    689999999889999887643 348888888888


Q ss_pred             HHhH-------------------hccccc------CCCeEEEeecCCCCC
Q 034245           73 SDSL-------------------RCCLLS------FGKTVKVADLQALDW   97 (100)
Q Consensus        73 ~~~~-------------------~nil~~------~~~~~ki~dfgl~~~   97 (100)
                      .|++                   +||++.      ..+.+||+|||++..
T Consensus       138 ~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~  187 (373)
T 1q8y_A          138 KQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACW  187 (373)
T ss_dssp             HHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEE
T ss_pred             HHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccc
Confidence            7765                   788984      344899999999853

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.02  E-value=2.5e-10  Score=70.22  Aligned_cols=76  Identities=16%  Similarity=0.108  Sum_probs=57.4

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ...+.+|+.+++.++  | +++.+.+. +..++++||++ ++|.+ +...   -..    .++.|++             
T Consensus       148 ~~~~~~E~~~l~~l~--~-~~v~~~~~~~~~~lvmE~~~g~~L~~-l~~~---~~~----~i~~qi~~~l~~lH~~giiH  216 (282)
T 1zar_A          148 IRSARNEFRALQKLQ--G-LAVPKVYAWEGNAVLMELIDAKELYR-VRVE---NPD----EVLDMILEEVAKFYHRGIVH  216 (282)
T ss_dssp             HHHHHHHHHHHHHTT--T-SSSCCEEEEETTEEEEECCCCEEGGG-CCCS---CHH----HHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHHHHHHhcc--C-CCcCeEEeccceEEEEEecCCCcHHH-cchh---hHH----HHHHHHHHHHHHHHHCCCEe
Confidence            456889999999999  5 77777666 77899999999 89988 4321   111    2333433             


Q ss_pred             -----hcccccCCCeEEEeecCCCCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALDWPS   99 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~~~~   99 (100)
                           +||+++ ++.+||+|||++....
T Consensus       217 rDlkp~NILl~-~~~vkl~DFG~a~~~~  243 (282)
T 1zar_A          217 GDLSQYNVLVS-EEGIWIIDFPQSVEVG  243 (282)
T ss_dssp             SCCSTTSEEEE-TTEEEECCCTTCEETT
T ss_pred             CCCCHHHEEEE-CCcEEEEECCCCeECC
Confidence                 899999 9999999999986543

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=98.52  E-value=1.7e-07  Score=60.23  Aligned_cols=87  Identities=14%  Similarity=-0.039  Sum_probs=57.8

Q ss_pred             chhhHHHHHHHHhhCCC-Ccce---------------eee------eeee-------ccEEEEEecccccHHHHhc----
Q 034245           11 VPSSMIREVSCLMELNH-PNII---------------RLM------LVVS-------QGLCLFLEYQANDLAYLLK----   57 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h-~~iv---------------~l~------~~~~-------~~~~lv~e~~~~~l~~~l~----   57 (100)
                      ....+.+|+.+++.++| .|..               .+.      ..+.       ...+++++...++|.+++.    
T Consensus       121 ~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~  200 (413)
T 3dzo_A          121 AIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLS  200 (413)
T ss_dssp             CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC---------------CCSEEEEEECCSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhc
Confidence            35678899999999876 2211               110      0001       3456777766688888774    


Q ss_pred             --cCCCCCCHHHHHHHHHHhH------------------hcccccCCCeEEEeecCCCCC
Q 034245           58 --YPKDSMDGYSIKFSSSDSL------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        58 --~~~~~~~~~~~~~~~~~~~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                        .....+++..+..++.|++                  +||+++.++.+||+|||++..
T Consensus       201 ~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~  260 (413)
T 3dzo_A          201 HSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVR  260 (413)
T ss_dssp             HTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEE
T ss_pred             ccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEeccceee
Confidence              2122255666677767765                  899999999999999999754

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.42  E-value=1.6e-07  Score=56.85  Aligned_cols=79  Identities=11%  Similarity=-0.018  Sum_probs=51.5

Q ss_pred             hHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc--c----cHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           14 SMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA--N----DLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        14 ~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~--~----~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      .+.+|+..++.+.|+++.. ...+. ...+++|||++  |    .+.+.....    ++..+..+..|++          
T Consensus       116 ~~~~E~~~l~~l~~~~i~~-p~~~~~~~~~lVmE~~g~~g~~~~~L~~~~~~~----~~~~~~~i~~qi~~~l~~lH~~~  190 (258)
T 1zth_A          116 WTEKEFRNLERAKEAGVSV-PQPYTYMKNVLLMEFIGEDELPAPTLVELGREL----KELDVEGIFNDVVENVKRLYQEA  190 (258)
T ss_dssp             HHHHHHHHHHHHHHTTCCC-CCEEEEETTEEEEECCEETTEECCBHHHHGGGG----GGSCHHHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHhCCCCC-CeEEEcCCCEEEEEecCCCCCccccHHHHhhcc----ChHHHHHHHHHHHHHHHHHHHHC
Confidence            6789999999998776422 22223 56789999995  3    566554321    1112223333322          


Q ss_pred             ---------hcccccCCCeEEEeecCCCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDWPS   99 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~~~   99 (100)
                               .||+++.  .++++|||+|...+
T Consensus       191 givHrDlkp~NILl~~--~~~liDFG~a~~~~  220 (258)
T 1zth_A          191 ELVHADLSEYNIMYID--KVYFIDMGQAVTLR  220 (258)
T ss_dssp             CEECSSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred             CEEeCCCCHHHEEEcC--cEEEEECcccccCC
Confidence                     8999988  89999999987554

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=96.86  E-value=0.0003  Score=45.36  Aligned_cols=55  Identities=9%  Similarity=-0.033  Sum_probs=35.2

Q ss_pred             ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------------hcccccCCC----------eEEE
Q 034245           39 QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------------RCCLLSFGK----------TVKV   89 (100)
Q Consensus        39 ~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------------~nil~~~~~----------~~ki   89 (100)
                      ...+++|||++ .++.+.... .  -+    ..+..|++                  .||++..++          .+.|
T Consensus       184 ~~~~LVME~i~G~~L~~l~~~-~--~~----~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~i  256 (397)
T 4gyi_A          184 SRHTIVMSLVDALPMRQVSSV-P--DP----ASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPII  256 (397)
T ss_dssp             ETTEEEEECCSCEEGGGCCCC-S--CH----HHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEE
T ss_pred             cCceEEEEecCCccHhhhccc-H--HH----HHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEE
Confidence            44579999999 666554321 1  11    22233332                  899998766          4889


Q ss_pred             eecCCCCCCCC
Q 034245           90 ADLQALDWPSH  100 (100)
Q Consensus        90 ~dfgl~~~~~~  100 (100)
                      +||+-+...+|
T Consensus       257 ID~~Q~V~~~h  267 (397)
T 4gyi_A          257 IXFPQMVSMDH  267 (397)
T ss_dssp             CCCTTCEETTS
T ss_pred             EEeCCcccCCC
Confidence            99998776655

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=96.43  E-value=0.0083  Score=35.51  Aligned_cols=40  Identities=23%  Similarity=0.174  Sum_probs=29.1

Q ss_pred             hhHHHHHHHHhhCCCCc--ceeeeeeee--ccEEEEEeccc-ccH
Q 034245           13 SSMIREVSCLMELNHPN--IIRLMLVVS--QGLCLFLEYQA-NDL   52 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~--iv~l~~~~~--~~~~lv~e~~~-~~l   52 (100)
                      ..+.+|+..++.+.+.+  +.+++....  +..++++|+++ .++
T Consensus        58 ~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l  102 (264)
T 1nd4_A           58 NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL  102 (264)
T ss_dssp             SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             hhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCccc
Confidence            56789999998885433  445666665  67899999998 555

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=96.37  E-value=0.0063  Score=36.39  Aligned_cols=44  Identities=9%  Similarity=-0.027  Sum_probs=34.6

Q ss_pred             hhhHHHHHHHHhhCC-CCcceeeeeeee--ccEEEEEeccc-ccHHHH
Q 034245           12 PSSMIREVSCLMELN-HPNIIRLMLVVS--QGLCLFLEYQA-NDLAYL   55 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~-h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~   55 (100)
                      ...+.+|+.+++.+. +.++.++++.+.  +..|++||+++ .++.+.
T Consensus        53 ~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~  100 (263)
T 3tm0_A           53 TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEE  100 (263)
T ss_dssp             TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehhhc
Confidence            346889999999884 566777777776  78899999999 667664

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=95.00  E-value=0.1  Score=32.71  Aligned_cols=41  Identities=12%  Similarity=0.222  Sum_probs=29.1

Q ss_pred             hhhHHHHHHHHhhCC--CCcceeeeeeee-----ccEEEEEeccc-ccH
Q 034245           12 PSSMIREVSCLMELN--HPNIIRLMLVVS-----QGLCLFLEYQA-NDL   52 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~--h~~iv~l~~~~~-----~~~~lv~e~~~-~~l   52 (100)
                      ...+.+|..+++.+.  +.++.+++..+.     +..|+++|+++ ..+
T Consensus        80 ~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l  128 (359)
T 3dxp_A           80 AHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVL  128 (359)
T ss_dssp             --CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECCCCBCC
T ss_pred             HHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEecCCeec
Confidence            346889999999886  345666776665     34899999998 444

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=94.95  E-value=0.089  Score=31.42  Aligned_cols=43  Identities=9%  Similarity=0.008  Sum_probs=29.7

Q ss_pred             hhhHHHHHHHHhhCC-CCcceeeeeeee--ccEEEEEeccc-ccHHH
Q 034245           12 PSSMIREVSCLMELN-HPNIIRLMLVVS--QGLCLFLEYQA-NDLAY   54 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~-h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~   54 (100)
                      ...+.+|...++.+. +-.+-+++..+.  +..|++||+++ .++.+
T Consensus        63 ~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~  109 (272)
T 4gkh_A           63 ANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQ  109 (272)
T ss_dssp             HHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHH
T ss_pred             HhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccc
Confidence            345788999988774 333445566555  77899999998 54444

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=88.49  E-value=1  Score=27.40  Aligned_cols=21  Identities=10%  Similarity=0.078  Sum_probs=16.9

Q ss_pred             hcccccC--CCeEEEeecCCCCC
Q 034245           77 RCCLLSF--GKTVKVADLQALDW   97 (100)
Q Consensus        77 ~nil~~~--~~~~ki~dfgl~~~   97 (100)
                      .|++++.  ...+.+.||+.+..
T Consensus       201 ~N~l~~~~~~~~~~~iD~~~~~~  223 (304)
T 3sg8_A          201 DHILFDTEKNTICGIIDFGDAAI  223 (304)
T ss_dssp             GGEEEETTTTEEEEECCCTTCEE
T ss_pred             ccEEEeCCCCCEEEEEeCCCCcc
Confidence            8999987  56788999998753

>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}

Probab=86.44  E-value=0.03  Score=36.79  Aligned_cols=27  Identities=11%  Similarity=-0.112  Sum_probs=23.4

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS   38 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~   38 (100)
                      ..+|..|++.+++++|+|++++.++|.
T Consensus       323 ~~eF~~Eve~L~~i~HrNLV~L~gyC~  349 (487)
T 3oja_A          323 SETERLECERENQARQREIDALKEQYR  349 (487)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHhcccccchhhHHHHhc
Confidence            457999999999999999999999884

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	100
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-05
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	4e-05
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	6e-05
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	7e-05
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	8e-05
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-04
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-04
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-04
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	1e-04
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-04
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-04
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-04
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-04
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-04
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-04
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-04
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	3e-04
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	4e-04
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	4e-04
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	6e-04
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	6e-04
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	6e-04
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	7e-04
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	9e-04
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	0.001
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	0.001
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	0.001
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	0.001
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	0.002
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	0.002
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	0.003
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	0.003
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	0.003
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	0.003

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 40.0 bits (93), Expect = 1e-05
 Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 3/55 (5%)

Query: 6  NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQAN-DLAYLLK 57
            +E    SM  E++ L ++ HPNI+ L  +   G  L L ++  +  +L   + 
Sbjct: 45 KALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV 99

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 38.5 bits (89), Expect = 4e-05
 Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 3/64 (4%)

Query: 4   IHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEY-QANDLAYLLKYPK 60
           I+        ++  E+S + +L+HP +I L         + L LE+    +L   +    
Sbjct: 62  INTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAED 121

Query: 61  DSMD 64
             M 
Sbjct: 122 YKMS 125

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 38.1 bits (88), Expect = 6e-05
 Identities = 24/103 (23%), Positives = 37/103 (35%), Gaps = 20/103 (19%)

Query: 9   EEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQANDLAYLLKYPKDSMDGY 66
            E    +I+EV  L +L HPN I+      +     L +EY     + LL+  K  +   
Sbjct: 56  NEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEV 115

Query: 67  SIKFSSSDSLRC------------------CLLSFGKTVKVAD 91
            I   +  +L+                    LLS    VK+ D
Sbjct: 116 EIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGD 158

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (87), Expect = 7e-05
 Identities = 11/66 (16%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 1   MMEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG-LCLFLEYQAN-DLAYLLKY 58
           M+ +     +   +   EV  L +  H NI+  M   +   L +  ++     L + L  
Sbjct: 37  MLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHI 96

Query: 59  PKDSMD 64
            +   +
Sbjct: 97  IETKFE 102

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (86), Expect = 8e-05
 Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 5   HNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV-SQGLCLFLEYQAN-DLAYLLKYPKDS 62
             T +     M+RE   + +L++P I+RL+ V  ++ L L +E      L   L   ++ 
Sbjct: 46  QGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREE 105

Query: 63  MD 64
           + 
Sbjct: 106 IP 107

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (86), Expect = 1e-04
 Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 5/75 (6%)

Query: 1   MMEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVV----SQGLCLFLEYQAN-DLAYL 55
            ++  +  E     ++ EV+ L EL HPNI+R    +    +  L + +EY    DLA +
Sbjct: 36  ELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASV 95

Query: 56  LKYPKDSMDGYSIKF 70
           +            +F
Sbjct: 96  ITKGTKERQYLDEEF 110

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (86), Expect = 1e-04
 Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 2/65 (3%)

Query: 8   MEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQANDLAYLLKYPKDSMDG 65
             + P ++ +E+     LNH N+++      +G    LFLEY +    +    P   M  
Sbjct: 43  AVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE 102

Query: 66  YSIKF 70
              + 
Sbjct: 103 PDAQR 107

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 37.4 bits (86), Expect = 1e-04
 Identities = 9/64 (14%), Positives = 23/64 (35%), Gaps = 3/64 (4%)

Query: 4   IHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEY-QANDLAYLLKYPK 60
           +    E    ++ +E+  +  L HP ++ L         + +  E+    +L   +    
Sbjct: 59  VMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEH 118

Query: 61  DSMD 64
           + M 
Sbjct: 119 NKMS 122

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 37.2 bits (85), Expect = 1e-04
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 2/80 (2%)

Query: 1   MMEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQANDLAYLLKY 58
            + +    E +PS+ IRE+S L EL H NI++L  V+     L L  E+   DL  LL  
Sbjct: 33  KIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDV 92

Query: 59  PKDSMDGYSIKFSSSDSLRC 78
            +  ++  + K      L  
Sbjct: 93  CEGGLESVTAKSFLLQLLNG 112

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (85), Expect = 1e-04
 Identities = 9/58 (15%), Positives = 20/58 (34%), Gaps = 2/58 (3%)

Query: 9   EEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQANDLAYLLKYPKDSMD 64
             + + +IRE+  L E N P I+           + + +E+        +      + 
Sbjct: 45  PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP 102

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (84), Expect = 1e-04
 Identities = 11/52 (21%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 3   EIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQANDL 52
           +++   +     +I E+  + E  +PNI+  +     G  L + +EY A   
Sbjct: 52  QMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGS 103

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (84), Expect = 2e-04
 Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 4   IHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQANDLAYLLKY 58
           I    EE     + E+  L   +HPNI++L+        L + +E+ A      +  
Sbjct: 45  IDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVML 101

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (84), Expect = 2e-04
 Identities = 9/48 (18%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 5  HNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG-LCLFLEYQAND 51
          + T + V    ++E   + + +HP+I++L+ V+++  + + +E     
Sbjct: 45 NCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLG 92

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (83), Expect = 2e-04
 Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 8/72 (11%)

Query: 1   MMEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--------LCLFLEYQANDL 52
            +      E       RE+  L  + H N+I L+ V +            L + +   DL
Sbjct: 50  KLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDL 109

Query: 53  AYLLKYPKDSMD 64
             L+K+ K   D
Sbjct: 110 GKLMKHEKLGED 121

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (83), Expect = 3e-04
 Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 12 PSSMIREVSCLMELNHPNIIRLMLVVSQG-LCLFLEYQANDL 52
          P + + E + + +L H  ++RL  VV+Q  + +  EY  N  
Sbjct: 52 PDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGS 93

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (82), Expect = 3e-04
 Identities = 21/82 (25%), Positives = 30/82 (36%), Gaps = 2/82 (2%)

Query: 15  MIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQANDLAYLLKYPKDSMDGYSIKFSS 72
           + REVS L E+ HPN+I L  V      + L LE  A    +     K+S+         
Sbjct: 60  IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 119

Query: 73  SDSLRCCLLSFGKTVKVADLQA 94
              L          +   DL+ 
Sbjct: 120 KQILNGVYYLHSLQIAHFDLKP 141

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.6 bits (81), Expect = 3e-04
 Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 2/59 (3%)

Query: 1  MMEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQANDLAYLLK 57
           + +    E VPS+ IRE+S L ELNHPNI++L+ V+     L L  E+   DL   + 
Sbjct: 34 KIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD 92

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (81), Expect = 4e-04
 Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 4/53 (7%)

Query: 9  EEVPSSMIREVSCLMELNHPNIIRLMLVVSQ---GLCLFLEYQAN-DLAYLLK 57
          +    + + E S + +L H N+++L+ V+ +   GL +  EY A   L   L+
Sbjct: 41 DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR 93

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (81), Expect = 4e-04
 Identities = 11/95 (11%), Positives = 30/95 (31%), Gaps = 1/95 (1%)

Query: 1   MMEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQANDLAYLLKYP 59
           +++       +   ++ E + + +L++P I+R++ +   +   L +E             
Sbjct: 41  ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQ 100

Query: 60  KDSMDGYSIKFSSSDSLRCCLLSFGKTVKVADLQA 94
              +   +I                      DL A
Sbjct: 101 NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAA 135

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (80), Expect = 6e-04
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 9  EEVPSSMIREVSCLMELNHPNIIRLMLVVSQG-LCLFLEY 47
           E     IREV+ +  L+H N+IRL  VV    + +  E 
Sbjct: 52 PEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTEL 91

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (80), Expect = 6e-04
 Identities = 10/53 (18%), Positives = 21/53 (39%), Gaps = 3/53 (5%)

Query: 15  MIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQAN-DLAYLLKYPKDSMD 64
           + +E+S L    H NI+ L         L +  E+ +  D+   +      ++
Sbjct: 48  VKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELN 100

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (80), Expect = 6e-04
 Identities = 11/54 (20%), Positives = 25/54 (46%)

Query: 14 SMIREVSCLMELNHPNIIRLMLVVSQGLCLFLEYQANDLAYLLKYPKDSMDGYS 67
            I E   +M+L+HP +++L  V  +   + L ++  +   L  Y +     ++
Sbjct: 46 DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFA 99

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (79), Expect = 7e-04
 Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 3/53 (5%)

Query: 15 MIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQAN-DLAYLLKYPKDSMD 64
           I E   +M L+H  +++L  V ++   + +  EY AN  L   L+  +    
Sbjct: 46 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQ 98

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (78), Expect = 9e-04
 Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 3/81 (3%)

Query: 5   HNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQAN-DLAYLLKYPKD 61
                      + E S + E N  +++RL+ VVSQG    + +E     DL   L+  + 
Sbjct: 60  EAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRP 119

Query: 62  SMDGYSIKFSSSDSLRCCLLS 82
           +M    +    S S    +  
Sbjct: 120 AMANNPVLAPPSLSKMIQMAG 140

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (78), Expect = 0.001
 Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 8/50 (16%)

Query: 17  REVSCLMELNHPNIIRLMLVVSQG--------LCLFLEYQANDLAYLLKY 58
           RE+  + +L+H NI+RL               L L L+Y    +  + ++
Sbjct: 62  RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH 111

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (78), Expect = 0.001
 Identities = 14/64 (21%), Positives = 20/64 (31%), Gaps = 2/64 (3%)

Query: 9   EEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQANDLAYLLKYPKDSMDGY 66
           E     + RE   +  L+HP  ++L         L   L Y  N           S D  
Sbjct: 49  ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET 108

Query: 67  SIKF 70
             +F
Sbjct: 109 CTRF 112

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.3 bits (78), Expect = 0.001
 Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 2/48 (4%)

Query: 6   NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQAND 51
              E+     + E S + + +HPN+I L  VV++   + +  E+  N 
Sbjct: 65  GYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENG 112

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (78), Expect = 0.001
 Identities = 20/92 (21%), Positives = 36/92 (39%), Gaps = 2/92 (2%)

Query: 3   EIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG--LCLFLEYQANDLAYLLKYPK 60
                 + +  + +RE+  L EL+HPNII L+        + L  ++   DL  ++K   
Sbjct: 35  HRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNS 94

Query: 61  DSMDGYSIKFSSSDSLRCCLLSFGKTVKVADL 92
             +    IK     +L+         +   DL
Sbjct: 95  LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDL 126

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 33.9 bits (77), Expect = 0.002
 Identities = 10/59 (16%), Positives = 16/59 (27%), Gaps = 7/59 (11%)

Query: 9   EEVPSSMIREVSCLMELNHPNIIRLMLVV------SQGLCLFLEYQAN-DLAYLLKYPK 60
                   RE      LNHP I+ +               + +EY     L  ++    
Sbjct: 48  PSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG 106

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.6 bits (76), Expect = 0.002
 Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 4/79 (5%)

Query: 6   NTMEEVPSSMIREVSCLMEL-NHPNIIRLMLVVSQG--LCLFLEYQAN-DLAYLLKYPKD 61
           +       +++ E+  L  L NH NI+ L+   + G    +  EY    DL   L+  +D
Sbjct: 64  SAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRD 123

Query: 62  SMDGYSIKFSSSDSLRCCL 80
           S        +  +     L
Sbjct: 124 SFICSKTSPAIMEDDELAL 142

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.2 bits (75), Expect = 0.003
 Identities = 10/44 (22%), Positives = 24/44 (54%)

Query: 15  MIREVSCLMELNHPNIIRLMLVVSQGLCLFLEYQANDLAYLLKY 58
            ++E + + E+ HPN+++L+ V ++    ++  +      LL Y
Sbjct: 60  FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 103

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (75), Expect = 0.003
 Identities = 14/77 (18%), Positives = 31/77 (40%), Gaps = 4/77 (5%)

Query: 5   HNTMEEVPSSMIREVSCLMEL-NHPNIIRLMLVVSQG--LCLFLEYQAN-DLAYLLKYPK 60
                    +++ E+  + +L +H NI+ L+   +    + L  EY    DL   L+  +
Sbjct: 77  EKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKR 136

Query: 61  DSMDGYSIKFSSSDSLR 77
           +      I++ +   L 
Sbjct: 137 EKFSEDEIEYENQKRLE 153

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.9 bits (74), Expect = 0.003
 Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 10/80 (12%)

Query: 1   MMEIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG----------LCLFLEYQAN 50
            + + N  E  P + +RE+  L  L H N++ L+ +              + L  ++  +
Sbjct: 42  KVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH 101

Query: 51  DLAYLLKYPKDSMDGYSIKF 70
           DLA LL           IK 
Sbjct: 102 DLAGLLSNVLVKFTLSEIKR 121

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.8 bits (74), Expect = 0.003
 Identities = 9/57 (15%), Positives = 21/57 (36%), Gaps = 3/57 (5%)

Query: 7   TMEEVPSSMIREVSCLMELNHPNIIRLMLVVSQG---LCLFLEYQANDLAYLLKYPK 60
           T     S  + E   + + +HPN++ L+ +  +      + L Y  +         +
Sbjct: 67  TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE 123

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	100
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.84
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.83
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.82
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.82
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.82
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.81
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.81
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.81
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.81
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.8
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.79
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.79
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.78
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.78
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.77
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.77
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.77
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.77
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.76
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.76
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.76
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.76
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.75
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.75
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.75
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.74
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.74
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.74
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.73
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.73
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.73
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.72
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.72
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.71
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.71
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.7
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.68
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.67
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.67
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.67
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.65
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.64
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.63
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.63
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.62
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.6
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.6
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.6
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.59
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.57
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.56
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.55
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.54
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.54
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.53
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.53
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.51
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.5
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.49
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.34
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.27
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.42
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.38
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	95.12
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	89.64

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=9.2e-21  Score=114.97  Aligned_cols=95  Identities=16%  Similarity=0.146  Sum_probs=82.7

Q ss_pred             ccCCCCcchhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----
Q 034245            4 IHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----   76 (100)
Q Consensus         4 ~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----   76 (100)
                      ....++...+.+.+|+.+++.++||||+++++++. +.+++++||++ |+|.+++.....++++..+..++.|++     
T Consensus        40 ~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~y  119 (276)
T d1uwha_          40 VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDY  119 (276)
T ss_dssp             CSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHH
T ss_pred             cccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEeccEEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHH
Confidence            34445556678999999999999999999999888 88999999999 999999977655699999999988877     


Q ss_pred             -------------hcccccCCCeEEEeecCCCCCC
Q 034245           77 -------------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 -------------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                                   +||+++.++.+||+|||+|...
T Consensus       120 LH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~  154 (276)
T d1uwha_         120 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK  154 (276)
T ss_dssp             HHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC-
T ss_pred             HhcCCEeccccCHHHEEEcCCCCEEEccccceeec
Confidence                         9999999999999999998653

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.1e-20  Score=115.14  Aligned_cols=92  Identities=20%  Similarity=0.330  Sum_probs=81.2

Q ss_pred             cCCCCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----
Q 034245            5 HNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----   76 (100)
Q Consensus         5 ~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----   76 (100)
                      .....+..+.+.+|+.+++.++||||+++++++.  +.++++|||++ |+|.+.+.....++++..+..++.|++     
T Consensus        46 ~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~y  125 (288)
T d2jfla1          46 DTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNY  125 (288)
T ss_dssp             ECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHH
T ss_pred             CcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence            3445556678999999999999999999999998  88999999999 999998765545599999999999977     


Q ss_pred             -------------hcccccCCCeEEEeecCCCC
Q 034245           77 -------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -------------~nil~~~~~~~ki~dfgl~~   96 (100)
                                   +||+++.++.+||+|||+|.
T Consensus       126 lH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~  158 (288)
T d2jfla1         126 LHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA  158 (288)
T ss_dssp             HHHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             HHHCCEEEeecChhheeECCCCCEEEEechhhh
Confidence                         89999999999999999985

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.82  E-value=2.5e-20  Score=114.07  Aligned_cols=88  Identities=19%  Similarity=0.259  Sum_probs=75.4

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      +..+.+.+|+.++++++|||||++++++.  +.+++++||++ |+|.+++......+++..+..++.|++          
T Consensus        69 ~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~  148 (299)
T d1jpaa_          69 KQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN  148 (299)
T ss_dssp             HHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            34567999999999999999999999998  88999999999 999998887665689999999998877          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +||+++.++.+||+|||+|..
T Consensus       149 iiHrDlKp~NILl~~~~~~Kl~DFGla~~  177 (299)
T d1jpaa_         149 YVHRDLAARNILVNSNLVCKVSDFGLSRF  177 (299)
T ss_dssp             CCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred             CccCccccceEEECCCCcEEECCcccceE
Confidence                    999999999999999999864

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=3.1e-20  Score=113.07  Aligned_cols=88  Identities=22%  Similarity=0.264  Sum_probs=79.2

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ...+.+.+|+.++++++||||+++++++. +.+|++|||++ |+|.+++......+++..+..++.|++           
T Consensus        51 ~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~i  130 (285)
T d1u59a_          51 ADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF  130 (285)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeeEeeeeccCeEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            34567999999999999999999999998 88999999999 999999877665699999999999977           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+||+|||++..
T Consensus       131 iHrDlKp~Nill~~~~~~Kl~DFGla~~  158 (285)
T d1u59a_         131 VHRDLAARNVLLVNRHYAKISDFGLSKA  158 (285)
T ss_dssp             ECCCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             ecCcCchhheeeccCCceeeccchhhhc
Confidence                   899999999999999999854

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=3.4e-20  Score=112.47  Aligned_cols=91  Identities=16%  Similarity=0.239  Sum_probs=79.2

Q ss_pred             CCCCcchhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------
Q 034245            6 NTMEEVPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus         6 ~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------   76 (100)
                      ..+++....+.+|+.++++++||||+++++++. ...++++||++ |+|.+++..... +++..+..++.|++       
T Consensus        46 ~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~~~~lvmE~~~~g~L~~~l~~~~~-l~~~~~~~i~~qi~~gl~ylH  124 (277)
T d1xbba_          46 ANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRH-VKDKNIIELVHQVSMGMKYLE  124 (277)
T ss_dssp             ---CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEEEECCTTEEHHHHHHHCTT-CCHHHHHHHHHHHHHHHHHHH
T ss_pred             hCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccCCEEEEEEcCCCCcHHHHHhhccC-CCHHHHHHHHHHHHHHHhhHH
Confidence            344445667999999999999999999999998 88899999999 999999887654 99999999998877       


Q ss_pred             -----------hcccccCCCeEEEeecCCCCC
Q 034245           77 -----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                 +||+++.++.+|++|||++..
T Consensus       125 ~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~  156 (277)
T d1xbba_         125 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA  156 (277)
T ss_dssp             HTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             hCCcccCCCcchhhcccccCcccccchhhhhh
Confidence                       999999999999999999853

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=5.6e-20  Score=111.24  Aligned_cols=86  Identities=20%  Similarity=0.207  Sum_probs=76.4

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ..+.+.+|+.++++++||||+++++.+.  +.+|++|||++ |+|.+.+.... ++++..+..+++|++           
T Consensus        46 ~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~i~~qi~~al~ylH~~~I  124 (271)
T d1nvra_          46 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLHGIGI  124 (271)
T ss_dssp             ---CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEeccCCCcHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence            3467899999999999999999999999  88999999999 99999997654 499999999999977           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+||+|||+|..
T Consensus       125 iHrDiKp~NILl~~~~~~KL~DFG~a~~  152 (271)
T d1nvra_         125 THRDIKPENLLLDERDNLKISDFGLATV  152 (271)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             ccCcccHHHEEECCCCCEEEccchhhee
Confidence                   999999999999999999864

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.2e-19  Score=109.28  Aligned_cols=89  Identities=22%  Similarity=0.395  Sum_probs=76.6

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      ....+++.+|+.+++.++||||+++++++.  +..++++||++ |+|.+++......+++..+..++.|++         
T Consensus        41 ~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~  120 (263)
T d1sm2a_          41 AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA  120 (263)
T ss_dssp             SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhcc
Confidence            334567999999999999999999999998  88999999999 999999887665688998888888876         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               +||+++.++.+||+|||++..
T Consensus       121 ~iiHrDlKp~Nill~~~~~~Kl~DFGla~~  150 (263)
T d1sm2a_         121 CVIHRDLAARNCLVGENQVIKVSDFGMTRF  150 (263)
T ss_dssp             TCCCTTCSGGGEEECGGGCEEECSCC----
T ss_pred             ceeecccchhheeecCCCCeEecccchhee
Confidence                     899999999999999999854

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.81  E-value=1.6e-19  Score=109.93  Aligned_cols=91  Identities=20%  Similarity=0.347  Sum_probs=79.4

Q ss_pred             CCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccC-CCCCCHHHHHHHHHHhH-------
Q 034245            8 MEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYP-KDSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~~~~-------   76 (100)
                      +....+.+.+|+.+++.++||||+++++.+.  +..++++||++ |++...+... ...+++..+..++.|++       
T Consensus        53 ~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH  132 (287)
T d1opja_          53 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE  132 (287)
T ss_dssp             TCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHH
Confidence            3444678999999999999999999999998  88999999999 9999998653 34489999888888876       


Q ss_pred             -----------hcccccCCCeEEEeecCCCCCC
Q 034245           77 -----------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 -----------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                                 +||+++.++.+||+|||+|...
T Consensus       133 ~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~  165 (287)
T d1opja_         133 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM  165 (287)
T ss_dssp             HTTCCCSCCSGGGEEECGGGCEEECCCCCTTTC
T ss_pred             HCCcccCccccCeEEECCCCcEEEccccceeec
Confidence                       8999999999999999998753

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.3e-19  Score=110.66  Aligned_cols=87  Identities=23%  Similarity=0.293  Sum_probs=77.8

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      ....+.+.+|+.+++.++||||+++++.+.  +.+|++|||++ |+|.+.+...  ++++..+..+++|++         
T Consensus        58 ~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~~~~~--~l~~~~~~~i~~qi~~aL~yLH~~  135 (293)
T d1yhwa1          58 QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSN  135 (293)
T ss_dssp             CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            334567999999999999999999999998  88999999999 9999987654  389999999999977         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               +||+++.++.+||+|||+|..
T Consensus       136 ~iiHrDiKp~NILl~~~~~vkl~DFG~a~~  165 (293)
T d1yhwa1         136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQ  165 (293)
T ss_dssp             TEECCCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             CCcccCCcHHHeEECCCCcEeeccchhhee
Confidence                     999999999999999999864

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=3.8e-19  Score=107.15  Aligned_cols=88  Identities=25%  Similarity=0.254  Sum_probs=78.9

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      .....+.+|+.+++.++||||+++++++.  +.+|+++||++ |+|.+.+..... +++..+..++.|++          
T Consensus        48 ~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmEy~~~g~L~~~l~~~~~-l~e~~~~~i~~qi~~al~~lH~~~  126 (263)
T d2j4za1          48 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR  126 (263)
T ss_dssp             TCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34567889999999999999999999999  88999999999 999999876553 99999999999977          


Q ss_pred             --------hcccccCCCeEEEeecCCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                              +|++++.++.+|++|||+|...
T Consensus       127 ivHrDiKp~Nill~~~~~~kl~DFG~a~~~  156 (263)
T d2j4za1         127 VIHRDIKPENLLLGSAGELKIADFGWSVHA  156 (263)
T ss_dssp             CCCCCCCGGGEEECTTSCEEECCCCSCSCC
T ss_pred             eeeeeeccccceecCCCCEeecccceeeec
Confidence                    9999999999999999998653

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.4e-19  Score=111.70  Aligned_cols=88  Identities=18%  Similarity=0.218  Sum_probs=78.5

Q ss_pred             CCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH--------
Q 034245            8 MEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~--------   76 (100)
                      ++.....+.||+.+++.++|||||+++++|.  +.+|+|+||++ |+|.+++..... +++..+..++.|++        
T Consensus        44 ~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy~~gg~L~~~l~~~~~-l~~~~~~~~~~qil~aL~yLH~  122 (322)
T d1s9ja_          44 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLRE  122 (322)
T ss_dssp             CTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHHH
Confidence            3445677999999999999999999999999  88999999999 999999976554 89999988888866        


Q ss_pred             -----------hcccccCCCeEEEeecCCCC
Q 034245           77 -----------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -----------~nil~~~~~~~ki~dfgl~~   96 (100)
                                 +||+++.++.+||+|||+|.
T Consensus       123 ~~~IiHRDiKP~NILl~~~~~vkl~DFGla~  153 (322)
T d1s9ja_         123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG  153 (322)
T ss_dssp             HHCCCCSCCSGGGEEECTTCCEEECCCCCCH
T ss_pred             hCCEEccccCHHHeeECCCCCEEEeeCCCcc
Confidence                       89999999999999999985

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.79  E-value=3.1e-19  Score=111.38  Aligned_cols=87  Identities=17%  Similarity=0.193  Sum_probs=77.8

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++||||+++++++.  ..+|++|||++ |+|.+.+.....++++..+..++.|++           
T Consensus        69 ~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~i  148 (352)
T d1koba_          69 DKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSI  148 (352)
T ss_dssp             HHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            3457889999999999999999999999  88999999999 999998877666699999999999977           


Q ss_pred             -------hccccc--CCCeEEEeecCCCCC
Q 034245           77 -------RCCLLS--FGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~--~~~~~ki~dfgl~~~   97 (100)
                             +||+++  .++.+||+|||+|..
T Consensus       149 iHRDiKp~NILl~~~~~~~vkL~DFGla~~  178 (352)
T d1koba_         149 VHLDIKPENIMCETKKASSVKIIDFGLATK  178 (352)
T ss_dssp             ECCCCCGGGEEESSTTCCCEEECCCTTCEE
T ss_pred             eecccccccccccccCCCeEEEeeccccee
Confidence                   899997  568999999999864

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.78  E-value=7.5e-19  Score=109.53  Aligned_cols=90  Identities=12%  Similarity=0.184  Sum_probs=78.4

Q ss_pred             CCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH--------
Q 034245            8 MEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~--------   76 (100)
                      .....+.+.+|+.+++.++||||+++++++.  +.+|++|||++ |+|.+.+....+++++..+..++.|++        
T Consensus        63 ~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~  142 (350)
T d1koaa2          63 HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE  142 (350)
T ss_dssp             SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            3334567889999999999999999999998  89999999999 999999876655699999999999977        


Q ss_pred             ----------hcccccC--CCeEEEeecCCCCC
Q 034245           77 ----------RCCLLSF--GKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------~nil~~~--~~~~ki~dfgl~~~   97 (100)
                                +||++..  ++.+||+|||+|..
T Consensus       143 ~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~  175 (350)
T d1koaa2         143 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAH  175 (350)
T ss_dssp             TTEECCCCCGGGEEESSTTSCCEEECCCTTCEE
T ss_pred             cCCeeeeechhHeeeccCCCCeEEEeecchhee
Confidence                      9999964  57899999999864

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=6.1e-19  Score=106.59  Aligned_cols=88  Identities=23%  Similarity=0.224  Sum_probs=75.7

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee------ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS------QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~------~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----   76 (100)
                      ....+.+.+|++++++++||||+++++++.      ..+|++|||++ |+|.+++.... .+++..+..++.|++     
T Consensus        49 ~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~gl~y  127 (270)
T d1t4ha_          49 KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQF  127 (270)
T ss_dssp             HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHhccc-cccHHHHHHHHHHHHHHHHH
Confidence            334567899999999999999999999986      45799999999 99999987654 389999998888876     


Q ss_pred             ---------------hccccc-CCCeEEEeecCCCCC
Q 034245           77 ---------------RCCLLS-FGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------------~nil~~-~~~~~ki~dfgl~~~   97 (100)
                                     +||+++ .++.+||+|||+|..
T Consensus       128 LH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~  164 (270)
T d1t4ha_         128 LHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL  164 (270)
T ss_dssp             HHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred             HHHCCCCEEeCCcChhhceeeCCCCCEEEeecCccee
Confidence                           899996 578999999999864

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=8.1e-19  Score=106.05  Aligned_cols=88  Identities=22%  Similarity=0.299  Sum_probs=76.8

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~----------   76 (100)
                      .....+.+|+.++++++||||+++++++. +..++++||++ |+|.+.+.... .++++..+..++.|++          
T Consensus        50 ~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~  129 (272)
T d1qpca_          50 MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN  129 (272)
T ss_dssp             SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCHHHHHHHHHHHHhCCCCCEeEEEeeeccCCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            34567999999999999999999999888 88899999999 99998775533 2389999998988876          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +||+++.++.+||+|||+|..
T Consensus       130 ivHrDiKp~NIll~~~~~~Kl~DFGla~~  158 (272)
T d1qpca_         130 YIHRDLRAANILVSDTLSCKIADFGLARL  158 (272)
T ss_dssp             EECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             cccCccchhheeeecccceeeccccceEE
Confidence                    899999999999999999854

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.77  E-value=8.2e-19  Score=107.78  Aligned_cols=86  Identities=26%  Similarity=0.240  Sum_probs=75.5

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      .+.+.+|+.+++.++||||+++++++.  +.+|+++||++ |++...+.... ++++..+..+++|++            
T Consensus        59 ~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~~~~~~-~l~e~~~~~i~~qi~~aL~yLH~~~ii  137 (309)
T d1u5ra_          59 WQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK-PLQEVEIAAVTHGALQGLAYLHSHNMI  137 (309)
T ss_dssp             HHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred             HHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEEecCCCchHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence            456899999999999999999999998  88999999999 77766555443 499999999999977            


Q ss_pred             ------hcccccCCCeEEEeecCCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                            +||+++.++.+||+|||+|...
T Consensus       138 HrDiKp~NILl~~~~~~Kl~DFG~a~~~  165 (309)
T d1u5ra_         138 HRDVKAGNILLSEPGLVKLGDFGSASIM  165 (309)
T ss_dssp             CCCCSGGGEEEETTTEEEECCCTTCBSS
T ss_pred             ccCCCcceEEECCCCCEEEeeccccccc
Confidence                  8999999999999999998754

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=2.2e-18  Score=103.48  Aligned_cols=89  Identities=22%  Similarity=0.331  Sum_probs=79.1

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      ......+.+|+.+++.++||||+++++++.  +.+++++||++ |++...+......+++..+..++.|++         
T Consensus        40 ~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~  119 (258)
T d1k2pa_          40 SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK  119 (258)
T ss_dssp             SSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhc
Confidence            334567999999999999999999999998  88999999999 999999777655688999999988877         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               +|++++.++.+||+|||++..
T Consensus       120 ~iiH~dlk~~Nill~~~~~~kl~DfG~a~~  149 (258)
T d1k2pa_         120 QFLHRDLAARNCLVNDQGVVKVSDFGLSRY  149 (258)
T ss_dssp             TBCCSCCSGGGEEECTTCCEEECCCSSCCB
T ss_pred             CcccccccceeEEEcCCCcEEECcchhhee
Confidence                     899999999999999999864

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=9.8e-19  Score=106.53  Aligned_cols=87  Identities=17%  Similarity=0.307  Sum_probs=77.8

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      .....+.+|+.+++.++||||+++++.+.  +.+|++|||++ |+|.+.+...+. +++..+..++.|++          
T Consensus        50 ~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~~~~~~~-l~e~~~~~~~~qi~~al~ylH~~~  128 (288)
T d1uu3a_          50 NKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLHGKG  128 (288)
T ss_dssp             TCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEEEccCCCCHHHhhhccCC-CCHHHHHHHHHHHHHHHHhhcccc
Confidence            34567899999999999999999999998  88999999999 999998876553 99999999998876          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +||+++.++.+|++|||+|..
T Consensus       129 iiHrDiKp~NIll~~~~~vkl~DFG~a~~  157 (288)
T d1uu3a_         129 IIHRDLKPENILLNEDMHIQITDFGTAKV  157 (288)
T ss_dssp             EECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEcCcCCccccccCCCceEEeccccccee
Confidence                    999999999999999999864

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1.3e-18  Score=105.05  Aligned_cols=87  Identities=23%  Similarity=0.369  Sum_probs=73.4

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ..+.+.+|+.++++++||||+++++.+. +.+++++||++ |++.+++.....++++..+..++.|++            
T Consensus        51 ~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ii  130 (273)
T d1mp8a_          51 VREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFV  130 (273)
T ss_dssp             HHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeEEEEEecCeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCee
Confidence            3567999999999999999999999998 88999999999 999998776666689999999988876            


Q ss_pred             ------hcccccCCCeEEEeecCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~   97 (100)
                            +||+++.++.+|++|||+|..
T Consensus       131 HrDlKp~NIll~~~~~~Kl~DfG~a~~  157 (273)
T d1mp8a_         131 HRDIAARNVLVSSNDCVKLGDFGLSRY  157 (273)
T ss_dssp             CSCCSGGGEEEEETTEEEECC------
T ss_pred             ccccchhheeecCCCcEEEccchhhee
Confidence                  899999999999999999864

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=2.3e-18  Score=104.48  Aligned_cols=87  Identities=21%  Similarity=0.221  Sum_probs=75.8

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++||||+++++++.  ...++++||+. +.+.+.+......+++..+..++.|++           
T Consensus        52 ~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~i  131 (283)
T d1mqba_          52 QRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY  131 (283)
T ss_dssp             HHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhcccccc
Confidence            3456899999999999999999999998  88999999999 888888877665699999999988876           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.++.+||+|||++..
T Consensus       132 iHrDlKp~NILl~~~~~~Kl~DFGla~~  159 (283)
T d1mqba_         132 VHRDLAARNILVNSNLVCKVSDFGLSRV  159 (283)
T ss_dssp             CCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred             ccCccccceEEECCCCeEEEcccchhhc
Confidence                   999999999999999999864

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=7e-19  Score=106.26  Aligned_cols=90  Identities=24%  Similarity=0.303  Sum_probs=75.0

Q ss_pred             CCcchhhHHHHHHHHhhCCCCcceeeeeeee----ccEEEEEeccc-ccHHHHhccC---CCCCCHHHHHHHHHHhH---
Q 034245            8 MEEVPSSMIREVSCLMELNHPNIIRLMLVVS----QGLCLFLEYQA-NDLAYLLKYP---KDSMDGYSIKFSSSDSL---   76 (100)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~----~~~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~~~~~~~---   76 (100)
                      ++...+.+.+|+.+++.++||||+++++++.    ..+|++|||++ |+|.+.+...   ...+++..+..++.|++   
T Consensus        43 ~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al  122 (269)
T d2java1          43 TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL  122 (269)
T ss_dssp             CHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHH
Confidence            3344567899999999999999999999885    66899999999 9999988542   23489999888887765   


Q ss_pred             --------------------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                          +||+++.++.+||+|||+|..
T Consensus       123 ~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~  163 (269)
T d2java1         123 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI  163 (269)
T ss_dssp             HHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred             HHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence                                899999999999999998753

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=4.1e-18  Score=105.71  Aligned_cols=86  Identities=17%  Similarity=0.307  Sum_probs=78.0

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ....+.+|+.+++.++||||+++++++.  ..+|+++||++ |+|...+..... +++..++.++.|++           
T Consensus        48 ~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ey~~gg~L~~~~~~~~~-~~e~~~~~~~~qil~al~ylH~~~i  126 (337)
T d1o6la_          48 EVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV-FTEERARFYGAEIVSALEYLHSRDV  126 (337)
T ss_dssp             CHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSC-CCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccceeccCCCchhhhhhcccC-CcHHHHHHHHHHHhhhhhhhhhcCc
Confidence            4567889999999999999999999999  88999999999 999999887654 89999999998876           


Q ss_pred             -------hcccccCCCeEEEeecCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~   97 (100)
                             +||+++.+|.+||+|||+|..
T Consensus       127 iHRDlKP~NILl~~~g~vkl~DFG~a~~  154 (337)
T d1o6la_         127 VYRDIKLENLMLDKDGHIKITDFGLCKE  154 (337)
T ss_dssp             BCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             cccccCHHHeEecCCCCEEEeecccccc
Confidence                   899999999999999999864

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.75  E-value=2.4e-18  Score=104.27  Aligned_cols=85  Identities=20%  Similarity=0.196  Sum_probs=77.1

Q ss_pred             hhHHHHHHHHhhCC-CCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           13 SSMIREVSCLMELN-HPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~-h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      +.+.+|+.++++++ ||||+++++++.  +.+|++|||++ |+|.+.++... ++++..+..++.|++            
T Consensus        54 ~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~~iv  132 (277)
T d1phka_          54 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALHKLNIV  132 (277)
T ss_dssp             HHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHhcCCCCeEEEEeecccCcceEEEEEcCCCchHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCCc
Confidence            46889999999996 999999999999  88999999999 99999997755 499999999999977            


Q ss_pred             ------hcccccCCCeEEEeecCCCCCC
Q 034245           77 ------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 ------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                            +|++++.++.+||+|||++...
T Consensus       133 HrDlkp~Nill~~~~~~kl~DFG~a~~~  160 (277)
T d1phka_         133 HRDLKPENILLDDDMNIKLTDFGFSCQL  160 (277)
T ss_dssp             CSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             ccccccceEEEcCCCCeEEccchheeEc
Confidence                  8999999999999999998643

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=8.9e-18  Score=103.55  Aligned_cols=86  Identities=15%  Similarity=0.158  Sum_probs=76.4

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++||||+++++++.  +.+|++|||++ ++|.+.+.....++++..+..++.|++            
T Consensus        45 ~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~ii  124 (321)
T d1tkia_          45 QVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIG  124 (321)
T ss_dssp             HHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            456889999999999999999999999  89999999999 999999987665699999999999977            


Q ss_pred             ------hcccccC--CCeEEEeecCCCCC
Q 034245           77 ------RCCLLSF--GKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~~--~~~~ki~dfgl~~~   97 (100)
                            +||+++.  ...+|++|||++..
T Consensus       125 HrDlKp~NIll~~~~~~~ikl~DFG~~~~  153 (321)
T d1tkia_         125 HFDIRPENIIYQTRRSSTIKIIEFGQARQ  153 (321)
T ss_dssp             CCCCCGGGEEESSSSCCCEEECCCTTCEE
T ss_pred             cccccccceeecCCCceEEEEcccchhhc
Confidence                  8999984  45899999999854

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=5.3e-18  Score=104.64  Aligned_cols=90  Identities=21%  Similarity=0.315  Sum_probs=75.2

Q ss_pred             CCcchhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCC----------------------
Q 034245            8 MEEVPSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKD----------------------   61 (100)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~----------------------   61 (100)
                      +......+.+|+.++.++ +|||||++++++.  +.+++++||++ |+|.+++.....                      
T Consensus        80 ~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (325)
T d1rjba_          80 DSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN  159 (325)
T ss_dssp             ----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC--------------------
T ss_pred             CHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccC
Confidence            344456789999999998 8999999999999  88999999999 999999976432                      


Q ss_pred             CCCHHHHHHHHHHhH------------------hcccccCCCeEEEeecCCCCC
Q 034245           62 SMDGYSIKFSSSDSL------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        62 ~~~~~~~~~~~~~~~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      .+++..+..++.|++                  +||+++.++.+||+|||+|..
T Consensus       160 ~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~  213 (325)
T d1rjba_         160 VLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARD  213 (325)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhccccccCCeEEEeecccccc
Confidence            367788888888876                  899999999999999999864

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.74  E-value=5.8e-18  Score=103.85  Aligned_cols=85  Identities=18%  Similarity=0.162  Sum_probs=69.3

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------   76 (100)
                      ...+.+|+.+++.++||||+++++++.  +.+|++|||++ |+|.+++.... .+++..+..++.|++            
T Consensus        51 ~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH~~~ii  129 (307)
T d1a06a_          51 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG-FYTERDASRLIFQVLDAVKYLHDLGIV  129 (307)
T ss_dssp             ----CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCS-CCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHhhhccc-CCCHHHHHHHHHHHHHHHHhhhhceee
Confidence            356889999999999999999999999  88999999999 99999997755 499999999999977            


Q ss_pred             ------hccccc---CCCeEEEeecCCCCC
Q 034245           77 ------RCCLLS---FGKTVKVADLQALDW   97 (100)
Q Consensus        77 ------~nil~~---~~~~~ki~dfgl~~~   97 (100)
                            +|+++.   .++.+|++|||+|..
T Consensus       130 HrDiKp~Nil~~~~~~~~~vkl~DFG~a~~  159 (307)
T d1a06a_         130 HRDLKPENLLYYSLDEDSKIMISDFGLSKM  159 (307)
T ss_dssp             CSCCCGGGEEESSSSTTCCEEECCC-----
T ss_pred             eEEecccceeecccCCCceEEEeccceeEE
Confidence                  799985   468999999999864

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.1e-17  Score=101.94  Aligned_cols=86  Identities=27%  Similarity=0.269  Sum_probs=76.1

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      ..+.+.+|+.+++.++||||+++++++.  +.+|+++||++ |+|.+++.... ++++..+..++.|++           
T Consensus        56 ~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~-~l~~~~~~~~~~qi~~al~yLH~~~i  134 (293)
T d1jksa_          56 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSLQI  134 (293)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCccccchhcccc-ccchhHHHHHHHHHHHHHHhhhhcce
Confidence            3567899999999999999999999999  88999999999 99999987654 499999999998876           


Q ss_pred             -------hcccccCCC----eEEEeecCCCCC
Q 034245           77 -------RCCLLSFGK----TVKVADLQALDW   97 (100)
Q Consensus        77 -------~nil~~~~~----~~ki~dfgl~~~   97 (100)
                             +|++++.++    .+|++|||+|..
T Consensus       135 vHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~  166 (293)
T d1jksa_         135 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK  166 (293)
T ss_dssp             ECCCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             eecccccceEEEecCCCcccceEecchhhhhh
Confidence                   899998665    599999999854

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=9.9e-18  Score=102.96  Aligned_cols=90  Identities=21%  Similarity=0.214  Sum_probs=78.5

Q ss_pred             CCcchhhHHHHHHHHhhCCCCcceeeeeeee---ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------
Q 034245            8 MEEVPSSMIREVSCLMELNHPNIIRLMLVVS---QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~---~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------   76 (100)
                      +.+..+++.+|+.++++++||||+++++.+.   +..++++||++ +++.+++.......++..+..++.|++       
T Consensus        68 ~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH  147 (311)
T d1r0pa_          68 DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA  147 (311)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhc
Confidence            4445677999999999999999999999976   67899999999 999999887665577888888888876       


Q ss_pred             -----------hcccccCCCeEEEeecCCCCC
Q 034245           77 -----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                 +||+++.++.+||+|||++..
T Consensus       148 ~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~  179 (311)
T d1r0pa_         148 SKKFVHRDLAARNCMLDEKFTVKVADFGLARD  179 (311)
T ss_dssp             HTTCCCSCCSGGGEEECTTCCEEECSSGGGCC
T ss_pred             ccCcccCCccHHhEeECCCCCEEEecccchhh
Confidence                       899999999999999999864

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=8.8e-18  Score=103.32  Aligned_cols=90  Identities=14%  Similarity=0.195  Sum_probs=78.7

Q ss_pred             CCcchhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245            8 MEEVPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      +++..+.+.+|+.++++++||||+++++++. ...+++++++. +++.+.+......+++..+..++.|++         
T Consensus        51 ~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~  130 (317)
T d1xkka_          51 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR  130 (317)
T ss_dssp             --CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHc
Confidence            3445677999999999999999999999999 88889999999 999998887666699999999988876         


Q ss_pred             ---------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~~   97 (100)
                               +||+++.++.+||+|||+|..
T Consensus       131 ~iiHrDlKp~NIll~~~~~~kl~DFGla~~  160 (317)
T d1xkka_         131 RLVHRDLAARNVLVKTPQHVKITDFGLAKL  160 (317)
T ss_dssp             TCCCSCCCGGGEEEEETTEEEECCCSHHHH
T ss_pred             CcccCcchhhcceeCCCCCeEeecccccee
Confidence                     999999999999999998753

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.73  E-value=1.3e-17  Score=102.64  Aligned_cols=87  Identities=21%  Similarity=0.283  Sum_probs=77.1

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      +..+.+.+|+.+++.++||||+++++++.  ..+|+++||+. +++...+..... ++...+..++.|++          
T Consensus        46 ~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~l~~~~~~~~~-~~~~~~~~~~~qi~~al~~lH~~~  124 (316)
T d1fota_          46 KQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQR-FPNPVAKFYAAEVCLALEYLHSKD  124 (316)
T ss_dssp             TCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSS-CCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEeeecCCcccccccccccc-ccccHHHHHHHHHHHhhhhhccCc
Confidence            34567889999999999999999999999  88999999999 899888877654 88888888888876          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +||+++.++.+||+|||+|..
T Consensus       125 iiHrDiKp~NILl~~~g~vkL~DFG~a~~  153 (316)
T d1fota_         125 IIYRDLKPENILLDKNGHIKITDFGFAKY  153 (316)
T ss_dssp             EECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred             EEccccCchheeEcCCCCEEEecCccceE
Confidence                    999999999999999999864

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=5.3e-18  Score=102.54  Aligned_cols=89  Identities=25%  Similarity=0.254  Sum_probs=78.6

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      ++..+.+.+|+.++++++||||+++++.+. ...++++||++ +++.+.+.....++++..+..++.|++          
T Consensus        52 ~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~  131 (273)
T d1u46a_          52 PEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR  131 (273)
T ss_dssp             CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEEEEEEEEeecchheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCC
Confidence            344567999999999999999999999999 88899999999 999988776555599999999988876          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +||+++.++.+|++|||++..
T Consensus       132 iiHrDikp~NIll~~~~~vkl~DfGl~~~  160 (273)
T d1u46a_         132 FIHRDLAARNLLLATRDLVKIGDFGLMRA  160 (273)
T ss_dssp             EECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred             EeeeeecHHHhccccccceeeccchhhhh
Confidence                    899999999999999999864

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=7.4e-18  Score=102.49  Aligned_cols=88  Identities=20%  Similarity=0.254  Sum_probs=76.7

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee-ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS-QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~----------   76 (100)
                      ...+.+.+|+.+++.++||||+++++.+. ...++++||++ |++...+.... ..+++..+..++.|++          
T Consensus        54 ~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~  133 (285)
T d1fmka3          54 MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN  133 (285)
T ss_dssp             SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCHHHHHHHHHHHHhcccCCEeEEEEEEecCCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhh
Confidence            34567999999999999999999999988 88999999999 99888876532 3489999999998877          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +||+++.++.+||+|||++..
T Consensus       134 ivH~DlKp~NIll~~~~~~kl~DfGla~~  162 (285)
T d1fmka3         134 YVHRDLRAANILVGENLVCKVADFGLARL  162 (285)
T ss_dssp             CCCSCCSGGGEEECGGGCEEECCCCTTC-
T ss_pred             eecccccceEEEECCCCcEEEcccchhhh
Confidence                    999999999999999999854

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=1.1e-17  Score=101.97  Aligned_cols=86  Identities=27%  Similarity=0.343  Sum_probs=72.9

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ...+.+|+.+++.++||||+++++++.  +.+|++|||+.+.....+......+++..+..+++|++             
T Consensus        44 ~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiH  123 (299)
T d1ua2a_          44 NRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILH  123 (299)
T ss_dssp             CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceec
Confidence            456899999999999999999999999  88999999999444444444344488888888988876             


Q ss_pred             -----hcccccCCCeEEEeecCCCCC
Q 034245           77 -----RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----~nil~~~~~~~ki~dfgl~~~   97 (100)
                           +||+++.++.+||+|||+|..
T Consensus       124 rDiKp~NIli~~~~~~KL~DFG~a~~  149 (299)
T d1ua2a_         124 RDLKPNNLLLDENGVLKLADFGLAKS  149 (299)
T ss_dssp             CCCCGGGEEECTTCCEEECCCGGGST
T ss_pred             ccCCcceEEecCCCccccccCccccc
Confidence                 999999999999999999864

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1.9e-17  Score=100.95  Aligned_cols=90  Identities=33%  Similarity=0.425  Sum_probs=74.1

Q ss_pred             CCCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHh-ccCCCCCCHHHHHHHHHHhH-------
Q 034245            7 TMEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLL-KYPKDSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus         7 ~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l-~~~~~~~~~~~~~~~~~~~~-------   76 (100)
                      ..+.....+.+|++++++++||||+++++.+.  +.+|+++||+.+.+...+ ......+++..+..++.|++       
T Consensus        40 ~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH  119 (298)
T d1gz8a_          40 ETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH  119 (298)
T ss_dssp             ----CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhh
Confidence            33445678999999999999999999999999  889999999995554444 33344599999999999977       


Q ss_pred             -----------hcccccCCCeEEEeecCCCC
Q 034245           77 -----------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -----------~nil~~~~~~~ki~dfgl~~   96 (100)
                                 +||+++.++.+|++|||+|.
T Consensus       120 ~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~  150 (298)
T d1gz8a_         120 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR  150 (298)
T ss_dssp             HTTCCCSCCCGGGEEECTTSCEEECSTTHHH
T ss_pred             cCCEEccccCchheeecccCcceeccCCcce
Confidence                       99999999999999999874

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.71  E-value=4.6e-17  Score=101.39  Aligned_cols=87  Identities=16%  Similarity=0.245  Sum_probs=77.9

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      ...+.+.+|+.+++.++||||+++++.+.  ...++++|++. |++...+..... +++..+..++.|++          
T Consensus        83 ~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~l~~~~~-l~e~~~~~i~~qi~~aL~yLH~~~  161 (350)
T d1rdqe_          83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYLHSLD  161 (350)
T ss_dssp             TCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHcCCCcEeecccccccccccccccccccccchhhhHhhcCC-CCHHHHHHHHHHHHHHHHHHHhCC
Confidence            34467889999999999999999999998  88899999999 999999876654 99999999999976          


Q ss_pred             --------hcccccCCCeEEEeecCCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~~   97 (100)
                              +||+++.++.+||+|||+|..
T Consensus       162 iiHRDIKP~NILl~~~g~ikL~DFG~a~~  190 (350)
T d1rdqe_         162 LIYRDLKPENLLIDQQGYIQVTDFGFAKR  190 (350)
T ss_dssp             EECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EecCcCCHHHcccCCCCCEEeeeceeeee
Confidence                    899999999999999999864

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=5.1e-17  Score=99.57  Aligned_cols=90  Identities=23%  Similarity=0.304  Sum_probs=75.8

Q ss_pred             CCcchhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccC---------------CCCCCHHHH
Q 034245            8 MEEVPSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYP---------------KDSMDGYSI   68 (100)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~---------------~~~~~~~~~   68 (100)
                      ..+..+.+.+|+.++..+ +||||+++++++.  +.+++++||++ |+|.+++...               ...+++..+
T Consensus        50 ~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  129 (309)
T d1fvra_          50 SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL  129 (309)
T ss_dssp             -----CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHH
T ss_pred             ChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHH
Confidence            334566799999999998 7999999999999  88999999999 9999998653               234889999


Q ss_pred             HHHHHHhH------------------hcccccCCCeEEEeecCCCCC
Q 034245           69 KFSSSDSL------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        69 ~~~~~~~~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      ..++.|++                  +||+++.++.+||+|||++..
T Consensus       130 ~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~DfG~a~~  176 (309)
T d1fvra_         130 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG  176 (309)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEES
T ss_pred             HHHHHHHHHHHHhhhcCCccccccccceEEEcCCCceEEcccccccc
Confidence            99998876                  899999999999999999854

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.68  E-value=1.1e-16  Score=96.92  Aligned_cols=89  Identities=31%  Similarity=0.399  Sum_probs=75.0

Q ss_pred             CCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH---------
Q 034245            8 MEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL---------   76 (100)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~---------   76 (100)
                      ++.....+.+|+.+++.++||||+++++.+.  +..+++++++.+.+...+......+++..+..++.|++         
T Consensus        40 ~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~  119 (286)
T d1ob3a_          40 DEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR  119 (286)
T ss_dssp             GGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccC
Confidence            3444678999999999999999999999999  88999999999444444444334599999999999977         


Q ss_pred             ---------hcccccCCCeEEEeecCCCC
Q 034245           77 ---------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ---------~nil~~~~~~~ki~dfgl~~   96 (100)
                               +||+++.++.+|++|||.+.
T Consensus       120 ~IvHrDiKp~NIll~~~~~~kl~DfG~a~  148 (286)
T d1ob3a_         120 RVLHRDLKPQNLLINREGELKIADFGLAR  148 (286)
T ss_dssp             TCCCSCCCGGGEEECTTSCEEECCTTHHH
T ss_pred             cEEecCCCCceeeEcCCCCEEecccccce
Confidence                     99999999999999999874

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=3.1e-17  Score=98.65  Aligned_cols=88  Identities=26%  Similarity=0.349  Sum_probs=73.3

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee---ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH--------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS---QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~---~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~--------   76 (100)
                      ...+.+.+|+.++++++||||+++++++.   +.+++++||++ |+|.+++.... .++++..+..++.|++        
T Consensus        42 ~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~  121 (262)
T d1byga_          42 ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG  121 (262)
T ss_dssp             C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhcccccc
Confidence            34578999999999999999999999885   56899999999 99999986543 2388999999998877        


Q ss_pred             ----------hcccccCCCeEEEeecCCCCC
Q 034245           77 ----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                +|++++.++.+|++|||++..
T Consensus       122 ~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~  152 (262)
T d1byga_         122 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKE  152 (262)
T ss_dssp             TTCCCSCCSGGGEEECTTSCEEECCCCC---
T ss_pred             CceeccccchHhheecCCCCEeeccccccee
Confidence                      899999999999999999864

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=3.9e-16  Score=96.13  Aligned_cols=86  Identities=20%  Similarity=0.293  Sum_probs=74.9

Q ss_pred             hhhHHHHHHHHh-hCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-----------
Q 034245           12 PSSMIREVSCLM-ELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-----------   76 (100)
Q Consensus        12 ~~~~~~e~~~l~-~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-----------   76 (100)
                      .+.+.+|...+. .++||||+++++++.  +.+|+++||++ |+|.+++..... +++..+..++.|++           
T Consensus        46 ~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmEy~~~g~L~~~i~~~~~-~~e~~~~~~~~qi~~al~ylH~~~i  124 (320)
T d1xjda_          46 VECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEIILGLQFLHSKGI  124 (320)
T ss_dssp             HHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEEeecCCCcHHHHhhccCC-CCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            455677777665 689999999999999  88999999999 999999987654 89999999998876           


Q ss_pred             -------hcccccCCCeEEEeecCCCCCC
Q 034245           77 -------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 -------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                             +||+++..+.+|++|||++...
T Consensus       125 iHrDikp~NiL~~~~~~~kl~DFG~a~~~  153 (320)
T d1xjda_         125 VYRDLKLDNILLDKDGHIKIADFGMCKEN  153 (320)
T ss_dssp             BCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             eeccCcccceeecCCCceeccccchhhhc
Confidence                   9999999999999999998753

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.67  E-value=1.7e-16  Score=99.28  Aligned_cols=79  Identities=19%  Similarity=0.226  Sum_probs=70.2

Q ss_pred             HHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------------------
Q 034245           18 EVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------------------   76 (100)
Q Consensus        18 e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------------------   76 (100)
                      |+.+++.++||||+++++++.  +.+|++|||++ |+|.+++..... +++..+..++.|++                  
T Consensus        57 ~~~~l~~~~hpnIv~l~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~-~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP  135 (364)
T d1omwa3          57 MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV-FSEADMRFYAAEIILGLEHMHNRFVVYRDLKP  135 (364)
T ss_dssp             HHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             HHHHHhcCCCCcEEEEEEEEEECCEEEEEEEecCCCcHHHHHHhccc-ccHHHHHHHHHHHHHHHHHHHHCCccceeecc
Confidence            466777789999999999999  88999999999 999999977653 89999999998876                  


Q ss_pred             hcccccCCCeEEEeecCCCCC
Q 034245           77 RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ~nil~~~~~~~ki~dfgl~~~   97 (100)
                      +||+++.++.+||+|||+|..
T Consensus       136 ~NILl~~~g~iKl~DFGla~~  156 (364)
T d1omwa3         136 ANILLDEHGHVRISDLGLACD  156 (364)
T ss_dssp             GGEEECSSSCEEECCCTTCEE
T ss_pred             ceeEEcCCCcEEEeeeceeee
Confidence            999999999999999999864

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.65  E-value=3.4e-16  Score=95.53  Aligned_cols=86  Identities=27%  Similarity=0.456  Sum_probs=74.4

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC-----------------------CCCC
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK-----------------------DSMD   64 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~-----------------------~~~~   64 (100)
                      ....+.+|+.+++.++|||++++++.+.  ...++++|+++ |+|.+++....                       ..++
T Consensus        59 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  138 (301)
T d1lufa_          59 MQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS  138 (301)
T ss_dssp             HHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCC
T ss_pred             HHHHHHHHHHHHHhcCCCCcccceeeeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCC
Confidence            3567999999999999999999999998  88999999999 99999886422                       1267


Q ss_pred             HHHHHHHHHHhH------------------hcccccCCCeEEEeecCCCC
Q 034245           65 GYSIKFSSSDSL------------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        65 ~~~~~~~~~~~~------------------~nil~~~~~~~ki~dfgl~~   96 (100)
                      +..+..++.|++                  +||+++.++.+||+|||++.
T Consensus       139 ~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld~~~~~Kl~DFGls~  188 (301)
T d1lufa_         139 CAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSR  188 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHH
T ss_pred             HHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEECCCCcEEEccchhhe
Confidence            778888888866                  99999999999999999974

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=4.5e-16  Score=95.32  Aligned_cols=86  Identities=23%  Similarity=0.283  Sum_probs=73.5

Q ss_pred             hhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC---------CCCCHHHHHHHHHHhH---
Q 034245           12 PSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK---------DSMDGYSIKFSSSDSL---   76 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~---------~~~~~~~~~~~~~~~~---   76 (100)
                      ...+.+|+.++++++||||+++++.+.  ...++++||++ |++.+++....         .+++...+..++.|++   
T Consensus        67 ~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl  146 (308)
T d1p4oa_          67 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM  146 (308)
T ss_dssp             HHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEeeeeeEEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHH
Confidence            456899999999999999999999998  88999999999 99999875321         2257777877877765   


Q ss_pred             ---------------hcccccCCCeEEEeecCCCCC
Q 034245           77 ---------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 ---------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                     +||+++.++.+||+|||+|..
T Consensus       147 ~~LH~~~ivHrDlk~~NiLld~~~~~Kl~DFGla~~  182 (308)
T d1p4oa_         147 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD  182 (308)
T ss_dssp             HHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCG
T ss_pred             HHHhhCCeeeceEcCCceeecCCceEEEeeccccee
Confidence                           899999999999999999853

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=2e-15  Score=91.33  Aligned_cols=95  Identities=27%  Similarity=0.312  Sum_probs=80.4

Q ss_pred             eccCCCCcchhhHHHHHHHHhhCCCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH---
Q 034245            3 EIHNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL---   76 (100)
Q Consensus         3 ~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~---   76 (100)
                      +.+..++.....+.+|+.+++.++|||++++++.+.  ...+++++++. +++...+.... .++...+..++.|++   
T Consensus        36 ~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~q~~~aL  114 (292)
T d1unla_          36 RLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNG-DLDPEIVKSFLFQLLKGL  114 (292)
T ss_dssp             ESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSEEHHHHHHHTTT-CCCHHHHHHHHHHHHHHH
T ss_pred             ehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEeeecccccccccccccc-ccchhHHHHHHHHHHHHH
Confidence            344555566788999999999999999999999999  88899999999 77777666554 489999999988876   


Q ss_pred             ---------------hcccccCCCeEEEeecCCCCCC
Q 034245           77 ---------------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 ---------------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                                     +||++..++.+|++|||.+...
T Consensus       115 ~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~  151 (292)
T d1unla_         115 GFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAF  151 (292)
T ss_dssp             HHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             HHhhcCCEeeecccCcccccccCCceeeeecchhhcc
Confidence                           8999999999999999998653

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=6.8e-16  Score=94.35  Aligned_cols=82  Identities=21%  Similarity=0.176  Sum_probs=67.0

Q ss_pred             hhHHHHHH--HHhhCCCCcceeeeeeee------ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH-------
Q 034245           13 SSMIREVS--CLMELNHPNIIRLMLVVS------QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus        13 ~~~~~e~~--~l~~l~h~~iv~l~~~~~------~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~-------   76 (100)
                      .++.+|.+  .+..++||||+++++++.      ..+|+++||++ |+|..++....  +++.....+..|++       
T Consensus        40 ~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~--l~~~~~~~~~~~ia~gl~~lH  117 (303)
T d1vjya_          40 RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLH  117 (303)
T ss_dssp             HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccCCCHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHH
Confidence            34444544  456789999999999987      25899999999 99999998753  78888777776754       


Q ss_pred             -------------------hcccccCCCeEEEeecCCCC
Q 034245           77 -------------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 -------------------~nil~~~~~~~ki~dfgl~~   96 (100)
                                         +||+++.++.+||+|||++.
T Consensus       118 ~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~  156 (303)
T d1vjya_         118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  156 (303)
T ss_dssp             CCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             HhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccc
Confidence                               89999999999999999875

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=7e-16  Score=95.57  Aligned_cols=89  Identities=21%  Similarity=0.270  Sum_probs=76.3

Q ss_pred             CCcchhhHHHHHHHHhhCCCCcceeeeeeee--------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH---
Q 034245            8 MEEVPSSMIREVSCLMELNHPNIIRLMLVVS--------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL---   76 (100)
Q Consensus         8 ~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~---   76 (100)
                      ++...+.+.+|+.+++.++|||+++++++|.        ..+++++||++.++...++..  .+++..+..+++|++   
T Consensus        57 ~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~--~l~~~~~~~~~~qi~~aL  134 (346)
T d1cm8a_          57 SELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE--KLGEDRIQFLVYQMLKGL  134 (346)
T ss_dssp             SHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceEEEEEecccccHHHHHHhc--cccHHHHHHHHHHHHHHH
Confidence            3344567899999999999999999999987        247999999987788877654  399999999999977   


Q ss_pred             ---------------hcccccCCCeEEEeecCCCCCC
Q 034245           77 ---------------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 ---------------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                                     +||+++.++.+|++|||+|...
T Consensus       135 ~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~  171 (346)
T d1cm8a_         135 RYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQA  171 (346)
T ss_dssp             HHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             HHHHhCCCcccccCcchhhcccccccccccccceecc
Confidence                           9999999999999999998654

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=4.3e-15  Score=90.97  Aligned_cols=92  Identities=25%  Similarity=0.307  Sum_probs=74.1

Q ss_pred             cCCCCcchhhHHHHHHHHhhCCCCcceeeeeeee----------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHH
Q 034245            5 HNTMEEVPSSMIREVSCLMELNHPNIIRLMLVVS----------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSD   74 (100)
Q Consensus         5 ~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~----------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~   74 (100)
                      +...+....++.+|+.++++++|||++++.+++.          +.+++++|++.+.+..........++...++.+++|
T Consensus        46 ~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~q  125 (318)
T d3blha1          46 ENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM  125 (318)
T ss_dssp             --CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHH
T ss_pred             hhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHH
Confidence            4445555678999999999999999999999875          357999999994444444444445899999999988


Q ss_pred             hH------------------hcccccCCCeEEEeecCCCC
Q 034245           75 SL------------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        75 ~~------------------~nil~~~~~~~ki~dfgl~~   96 (100)
                      ++                  +||+++.++.+|++|||++.
T Consensus       126 il~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~  165 (318)
T d3blha1         126 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR  165 (318)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             HHHHHHHhccCCEEecCcCchheeecCCCcEEeeecceee
Confidence            77                  99999999999999999985

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=2.4e-15  Score=92.13  Aligned_cols=88  Identities=24%  Similarity=0.269  Sum_probs=75.8

Q ss_pred             chhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC-----------------CCCCHHHHH
Q 034245           11 VPSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK-----------------DSMDGYSIK   69 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~-----------------~~~~~~~~~   69 (100)
                      ....+.+|+.+++++ +||||+++++.+.  ...++++||++ |++..++....                 ..+++..+.
T Consensus        69 ~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  148 (311)
T d1t46a_          69 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL  148 (311)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHH
Confidence            445688999999998 7999999999999  78999999999 99999986532                 137788888


Q ss_pred             HHHHHhH------------------hcccccCCCeEEEeecCCCCCC
Q 034245           70 FSSSDSL------------------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        70 ~~~~~~~------------------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                      .++.|++                  +||+++.++.+|++|||++...
T Consensus       149 ~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~  195 (311)
T d1t46a_         149 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDI  195 (311)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCT
T ss_pred             HHHHHHHHHHHHHHhCCeeecccccccccccccCcccccccchheec
Confidence            8888876                  8999999999999999998754

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=2.5e-15  Score=92.95  Aligned_cols=85  Identities=15%  Similarity=0.112  Sum_probs=71.5

Q ss_pred             hhHHHHHHHHhh-CCCCcceeeeeeee------ccEEEEEeccc-ccHHHHhccCC-CCCCHHHHHHHHHHhH-------
Q 034245           13 SSMIREVSCLME-LNHPNIIRLMLVVS------QGLCLFLEYQA-NDLAYLLKYPK-DSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~-l~h~~iv~l~~~~~------~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~~~-------   76 (100)
                      ..+.+|+.++.+ .+||||+++++++.      ..+|+++|||+ |+|.+++.... .++++..+..++.|++       
T Consensus        49 ~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH  128 (335)
T d2ozaa1          49 PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH  128 (335)
T ss_dssp             HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHH
Confidence            467899998654 58999999999885      55899999999 99999997653 3489999999999977       


Q ss_pred             -----------hcccccC---CCeEEEeecCCCCC
Q 034245           77 -----------RCCLLSF---GKTVKVADLQALDW   97 (100)
Q Consensus        77 -----------~nil~~~---~~~~ki~dfgl~~~   97 (100)
                                 +||+++.   .+.+|++|||+|..
T Consensus       129 ~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~  163 (335)
T d2ozaa1         129 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE  163 (335)
T ss_dssp             HTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred             HcCCccccccccccccccccccccccccccceeee
Confidence                       8999974   56899999999853

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.59  E-value=2.5e-15  Score=90.68  Aligned_cols=86  Identities=20%  Similarity=0.160  Sum_probs=75.3

Q ss_pred             cchhhHHHHHHHHhhCCCCcceeeeeeee------ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------
Q 034245           10 EVPSSMIREVSCLMELNHPNIIRLMLVVS------QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        10 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~------~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------   76 (100)
                      +....+.+|+.+++.++||||+++++++.      ..+|++|||++ ++|...+...+ ++++..+..++.|++      
T Consensus        49 ~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~-~l~~~~~~~i~~qi~~al~~l  127 (277)
T d1o6ya_          49 SFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFS  127 (277)
T ss_dssp             HHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEEEEEECCCCCEehhhhcccC-CCCHHHHHHHHHHHHHHHHHH
Confidence            34557899999999999999999999987      23899999999 99998887655 389999999999977      


Q ss_pred             ------------hcccccCCCeEEEeecCCCC
Q 034245           77 ------------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 ------------~nil~~~~~~~ki~dfgl~~   96 (100)
                                  +||+++.++..+++|||.+.
T Consensus       128 H~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~  159 (277)
T d1o6ya_         128 HQNGIIHRDVKPANIMISATNAVKVMDFGIAR  159 (277)
T ss_dssp             HHTTEECCCCSGGGEEEETTSCEEECCCTTCE
T ss_pred             HhCCccCccccCcccccCccccceeehhhhhh
Confidence                        99999999999999999764

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=8.5e-15  Score=89.22  Aligned_cols=86  Identities=21%  Similarity=0.307  Sum_probs=75.4

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee--ccEEEEEeccc-ccHHHHhccCC---------------CCCCHHHHHHHH
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPK---------------DSMDGYSIKFSS   72 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~---------------~~~~~~~~~~~~   72 (100)
                      ...+.+|...+..+ +||||+++++++.  ...++++||+. |++.+++....               ..+++..+..++
T Consensus        62 ~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  141 (299)
T d1fgka_          62 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCA  141 (299)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCeEEecccccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHH
Confidence            46688899988887 8999999999999  88999999999 99999997543               237889999999


Q ss_pred             HHhH------------------hcccccCCCeEEEeecCCCCC
Q 034245           73 SDSL------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        73 ~~~~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      .|++                  +|++++.++.+|++|||++..
T Consensus       142 ~qi~~al~ylH~~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~  184 (299)
T d1fgka_         142 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD  184 (299)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSTTCCCC
T ss_pred             HHHHHHHHHhhhCCEEeeeecccceeecCCCCeEeccchhhcc
Confidence            8876                  899999999999999999864

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=9.8e-15  Score=90.44  Aligned_cols=85  Identities=22%  Similarity=0.264  Sum_probs=70.9

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee-------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS-------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~-------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------   76 (100)
                      ....+.+|+.+++.++|||++++++++.       ...+++++++.++|.+++...  ++++..+..++.|++       
T Consensus        49 ~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~~~~~~g~L~~~l~~~--~l~~~~i~~i~~qil~al~yLH  126 (345)
T d1pmea_          49 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQ--HLSNDHICYFLYQILRGLKYIH  126 (345)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEEEEeecCCchhhhhhcC--CCCHHHHHHHHHHHHHHHHHHH
Confidence            3457899999999999999999999987       124555544449999999765  389999999999977       


Q ss_pred             -----------hcccccCCCeEEEeecCCCCC
Q 034245           77 -----------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----------~nil~~~~~~~ki~dfgl~~~   97 (100)
                                 +||+++.++.+||+|||++..
T Consensus       127 ~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~  158 (345)
T d1pmea_         127 SANVLHRDLKPSNLLLNTTCDLKICDFGLARV  158 (345)
T ss_dssp             HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             HCCCcCCCCCcceEEECCCCCEEEcccCceee
Confidence                       999999999999999999853

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=2.6e-14  Score=86.96  Aligned_cols=94  Identities=31%  Similarity=0.366  Sum_probs=73.8

Q ss_pred             cCCCCcchhhHHHHHHHHhhC---CCCcceeeeeeee-------ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHH
Q 034245            5 HNTMEEVPSSMIREVSCLMEL---NHPNIIRLMLVVS-------QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSS   73 (100)
Q Consensus         5 ~~~~~~~~~~~~~e~~~l~~l---~h~~iv~l~~~~~-------~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~   73 (100)
                      +..++.....+.+|+.+++.+   +||||+++++++.       ..+++++|++. +.+..........+++..+..++.
T Consensus        44 ~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (305)
T d1blxa_          44 QTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF  123 (305)
T ss_dssp             EBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHH
T ss_pred             hhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHH
Confidence            334444556788898887765   7999999999885       46899999999 555444444444589999999998


Q ss_pred             HhH------------------hcccccCCCeEEEeecCCCCCC
Q 034245           74 DSL------------------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        74 ~~~------------------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                      |++                  +||+++..+.+|++|||++...
T Consensus       124 qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~  166 (305)
T d1blxa_         124 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY  166 (305)
T ss_dssp             HHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCC
T ss_pred             HHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchhhhhhh
Confidence            876                  9999999999999999998653

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=7.6e-15  Score=88.44  Aligned_cols=84  Identities=18%  Similarity=0.186  Sum_probs=72.0

Q ss_pred             hhHHHHHHHHhhCC--CCcceeeeeeee--ccEEEEEeccc--ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           13 SSMIREVSCLMELN--HPNIIRLMLVVS--QGLCLFLEYQA--NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~--h~~iv~l~~~~~--~~~~lv~e~~~--~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      ..+.+|+.++++++  ||||+++++++.  +..++++|++.  +++.+.+.... .+++..+..++.|++          
T Consensus        52 ~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~~~~-~l~e~~~~~~~~qi~~al~~lH~~~  130 (273)
T d1xwsa_          52 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCG  130 (273)
T ss_dssp             CEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhccCCCCccEEEEEEeeCCeEEEEEEeccCcchHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            45789999999986  899999999999  88999999986  57777776654 489999999999976          


Q ss_pred             --------hcccccC-CCeEEEeecCCCCC
Q 034245           77 --------RCCLLSF-GKTVKVADLQALDW   97 (100)
Q Consensus        77 --------~nil~~~-~~~~ki~dfgl~~~   97 (100)
                              +||+++. .+.+|++|||+|..
T Consensus       131 iiHrDiKp~NIll~~~~~~vkl~DFG~a~~  160 (273)
T d1xwsa_         131 VLHRDIKDENILIDLNRGELKLIDFGSGAL  160 (273)
T ss_dssp             EECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             CccccCcccceEEecCCCeEEECcccccee
Confidence                    9999985 58999999999864

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=3.4e-15  Score=91.90  Aligned_cols=85  Identities=16%  Similarity=0.217  Sum_probs=74.9

Q ss_pred             chhhHHHHHHHHhhCCC-Ccceeeeeeee--ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------
Q 034245           11 VPSSMIREVSCLMELNH-PNIIRLMLVVS--QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h-~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------   76 (100)
                      ..+.+.+|++++++++| |||+++++.+.  ...++++||+. ++|...+..... +++..+..+++|++          
T Consensus        71 ~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~-~~e~~~~~~~~Qi~~al~~lH~~~  149 (322)
T d1vzoa_          71 TTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER-FTEHEVQIYVGEIVLALEHLHKLG  149 (322)
T ss_dssp             SGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSC-CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhccCCCeEEEeeeeeccCCceeeeeecccccHHHHHHHhccc-ccHHHHHHHHHHHHHHHHHhhcCC
Confidence            35678899999999965 89999999998  88999999999 999999877654 78888888888876          


Q ss_pred             --------hcccccCCCeEEEeecCCCC
Q 034245           77 --------RCCLLSFGKTVKVADLQALD   96 (100)
Q Consensus        77 --------~nil~~~~~~~ki~dfgl~~   96 (100)
                              +|++++.++.+||+|||++.
T Consensus       150 ivHrDiKp~Nill~~~~~vkL~DFG~a~  177 (322)
T d1vzoa_         150 IIYRDIKLENILLDSNGHVVLTDFGLSK  177 (322)
T ss_dssp             CCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred             EEeccCCccceeecCCCCEEEeeccchh
Confidence                    89999999999999999874

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=9.7e-15  Score=88.82  Aligned_cols=86  Identities=21%  Similarity=0.278  Sum_probs=66.6

Q ss_pred             hhhHHHHHHHHhhC-CCCcceeeeeeee---ccEEEEEeccc-ccHHHHhccCC---------------CCCCHHHHHHH
Q 034245           12 PSSMIREVSCLMEL-NHPNIIRLMLVVS---QGLCLFLEYQA-NDLAYLLKYPK---------------DSMDGYSIKFS   71 (100)
Q Consensus        12 ~~~~~~e~~~l~~l-~h~~iv~l~~~~~---~~~~lv~e~~~-~~l~~~l~~~~---------------~~~~~~~~~~~   71 (100)
                      ...+.+|...+..+ +|+|++.+.+.+.   ..+++++||++ |+|.+++....               ..+++..+..+
T Consensus        60 ~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  139 (299)
T d1ywna1          60 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY  139 (299)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHH
T ss_pred             HHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHH
Confidence            44677888877776 7899999999877   56899999999 99999986432               23778888888


Q ss_pred             HHHhH------------------hcccccCCCeEEEeecCCCCC
Q 034245           72 SSDSL------------------RCCLLSFGKTVKVADLQALDW   97 (100)
Q Consensus        72 ~~~~~------------------~nil~~~~~~~ki~dfgl~~~   97 (100)
                      +.|++                  +||+++.++.+||+|||+|..
T Consensus       140 ~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~~~~Kl~DFGla~~  183 (299)
T d1ywna1         140 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD  183 (299)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECC------
T ss_pred             HHHHHHHHHHHHhCCCcCCcCCccceeECCCCcEEEccCcchhh
Confidence            88876                  999999999999999999853

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=3.7e-14  Score=87.94  Aligned_cols=84  Identities=21%  Similarity=0.255  Sum_probs=67.6

Q ss_pred             hHHHHHHHHhhCCCCcceeeeeeee--------ccEEEEEecccccHHHHhc---cCCCCCCHHHHHHHHHHhH------
Q 034245           14 SMIREVSCLMELNHPNIIRLMLVVS--------QGLCLFLEYQANDLAYLLK---YPKDSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        14 ~~~~e~~~l~~l~h~~iv~l~~~~~--------~~~~lv~e~~~~~l~~~l~---~~~~~~~~~~~~~~~~~~~------   76 (100)
                      ...||+.++++++|||+++++++|.        ..+++++||+++.+...+.   .....+++..++.+++|++      
T Consensus        59 ~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yL  138 (350)
T d1q5ka_          59 FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI  138 (350)
T ss_dssp             SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence            3568999999999999999999985        3478999999954444432   2333489999999999977      


Q ss_pred             ------------hcccccCCC-eEEEeecCCCCC
Q 034245           77 ------------RCCLLSFGK-TVKVADLQALDW   97 (100)
Q Consensus        77 ------------~nil~~~~~-~~ki~dfgl~~~   97 (100)
                                  +||+++.++ .+||+|||++..
T Consensus       139 H~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~  172 (350)
T d1q5ka_         139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ  172 (350)
T ss_dssp             HTTTEECCCCCGGGEEECTTTCCEEECCCTTCEE
T ss_pred             HhcCCcccCCCcceEEEecCCCceeEecccchhh
Confidence                        999999765 899999999854

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.51  E-value=4.5e-14  Score=86.74  Aligned_cols=83  Identities=23%  Similarity=0.402  Sum_probs=70.1

Q ss_pred             chhhHHHHHHHHhhCC-CCcceeeeeeee----ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH--------
Q 034245           11 VPSSMIREVSCLMELN-HPNIIRLMLVVS----QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL--------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~-h~~iv~l~~~~~----~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~--------   76 (100)
                      ....+.+|+.+++.+. ||||+++++.+.    ..+++++||+. +++....+    .+++..+..+++|++        
T Consensus        72 ~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~----~l~e~~i~~i~~qil~aL~~LH~  147 (328)
T d3bqca1          72 KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCHS  147 (328)
T ss_dssp             CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECCCSCBGGGTTT----SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeecCCCcHHHHhc----CCCHHHHHHHHHHHHHHHHHHhh
Confidence            3567899999999995 999999999987    56999999999 88766532    389999999999977        


Q ss_pred             ----------hcccccCC-CeEEEeecCCCCC
Q 034245           77 ----------RCCLLSFG-KTVKVADLQALDW   97 (100)
Q Consensus        77 ----------~nil~~~~-~~~ki~dfgl~~~   97 (100)
                                +||+++.+ +.+|++|||+|..
T Consensus       148 ~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~  179 (328)
T d3bqca1         148 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF  179 (328)
T ss_dssp             TTEECCCCSGGGEEEETTTTEEEECCGGGCEE
T ss_pred             cccccccccccceEEcCCCCeeeeccccccee
Confidence                      99999865 5799999999853

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=3.9e-14  Score=87.53  Aligned_cols=86  Identities=17%  Similarity=0.201  Sum_probs=68.5

Q ss_pred             chhhHHHHHHHHhhCCCCcceeeeeeee-------ccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH------
Q 034245           11 VPSSMIREVSCLMELNHPNIIRLMLVVS-------QGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL------   76 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~-------~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~------   76 (100)
                      ....+.+|+.+++.++|||++++++++.       ...+++++++. ++|.+++...  ++++..+..++.|++      
T Consensus        60 ~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~~~--~l~e~~~~~i~~qil~aL~~L  137 (348)
T d2gfsa1          60 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYI  137 (348)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceEEEEEeecCCchhhhcccc--cccHHHHHHHHHHHHHHHHHH
Confidence            3456889999999999999999999885       22345556666 9999998654  399999999999977      


Q ss_pred             ------------hcccccCCCeEEEeecCCCCCC
Q 034245           77 ------------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 ------------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                                  +||+++.++.+|++|||++...
T Consensus       138 H~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~  171 (348)
T d2gfsa1         138 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHT  171 (348)
T ss_dssp             HHTTCCCCCCCGGGEEECTTCCEEECCC----CC
T ss_pred             HhCCCcccccCCccccccccccccccccchhccc
Confidence                        9999999999999999998754

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=9.7e-14  Score=86.19  Aligned_cols=87  Identities=21%  Similarity=0.279  Sum_probs=70.5

Q ss_pred             CcchhhHHHHHHHHhhCCCCcceeeeeeee--------ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH----
Q 034245            9 EEVPSSMIREVSCLMELNHPNIIRLMLVVS--------QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL----   76 (100)
Q Consensus         9 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~--------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~----   76 (100)
                      ......+.+|+.+++.++||||+++++++.        ..+|+++||+.+++.+.+..   .++...++.+++|++    
T Consensus        57 ~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~~---~~~~~~i~~~~~qil~gl~  133 (355)
T d2b1pa1          57 QTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIK  133 (355)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTS---CCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeEEEEeccchHHHHhhhc---CCCHHHHHHHHHHHHHHHH
Confidence            334456889999999999999999999985        57899999999665555532   389999999999977    


Q ss_pred             --------------hcccccCCCeEEEeecCCCCCC
Q 034245           77 --------------RCCLLSFGKTVKVADLQALDWP   98 (100)
Q Consensus        77 --------------~nil~~~~~~~ki~dfgl~~~~   98 (100)
                                    +|+++..++.+|++|||++...
T Consensus       134 ~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~  169 (355)
T d2b1pa1         134 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA  169 (355)
T ss_dssp             HHHHTTCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred             HhhhcccccccCCccccccccccceeeechhhhhcc
Confidence                          8999999999999999987653

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.34  E-value=6.7e-12  Score=76.03  Aligned_cols=85  Identities=13%  Similarity=0.137  Sum_probs=72.1

Q ss_pred             hhHHHHHHHHhhCCC-Ccceeeeeeee--ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           13 SSMIREVSCLMELNH-PNIIRLMLVVS--QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h-~~iv~l~~~~~--~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ..+.+|++.++.++| +|++.+.+.+.  ...++++|++.++|.+.+......++...+..++.|++             
T Consensus        45 ~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiH  124 (293)
T d1csna_          45 PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVY  124 (293)
T ss_dssp             CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred             HHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEecCCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCcee
Confidence            457889999999965 89999988888  88899999999999998877665689999888888866             


Q ss_pred             -----hcccccC-----CCeEEEeecCCCCC
Q 034245           77 -----RCCLLSF-----GKTVKVADLQALDW   97 (100)
Q Consensus        77 -----~nil~~~-----~~~~ki~dfgl~~~   97 (100)
                           +||+++.     .+.+|++|||+|..
T Consensus       125 rDiKp~Nili~~~~~~~~~~vkl~DFG~a~~  155 (293)
T d1csna_         125 RDIKPDNFLIGRPNSKNANMIYVVDFGMVKF  155 (293)
T ss_dssp             CCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred             ccCCccceeecCcccccCCceEEcccceeEE
Confidence                 8999964     57899999999853

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.27  E-value=2.6e-11  Score=73.40  Aligned_cols=85  Identities=11%  Similarity=0.062  Sum_probs=67.9

Q ss_pred             hhHHHHHHHHhhCCCCcceeeeeeee---ccEEEEEecccccHHHHhccCCCCCCHHHHHHHHHHhH-------------
Q 034245           13 SSMIREVSCLMELNHPNIIRLMLVVS---QGLCLFLEYQANDLAYLLKYPKDSMDGYSIKFSSSDSL-------------   76 (100)
Q Consensus        13 ~~~~~e~~~l~~l~h~~iv~l~~~~~---~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------   76 (100)
                      ..+.+|+++++.++|++++.....+.   ...++++|++++++...+......++...+..++.|++             
T Consensus        47 ~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH  126 (299)
T d1ckia_          47 PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIH  126 (299)
T ss_dssp             CCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEcCCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeee
Confidence            46889999999998887766655554   77889999999777777665555699999999988876             


Q ss_pred             -----hccccc---CCCeEEEeecCCCCC
Q 034245           77 -----RCCLLS---FGKTVKVADLQALDW   97 (100)
Q Consensus        77 -----~nil~~---~~~~~ki~dfgl~~~   97 (100)
                           +||++.   .+..+|++|||+|..
T Consensus       127 rDiKp~NIl~~~~~~~~~vkl~DFG~a~~  155 (299)
T d1ckia_         127 RDVKPDNFLMGLGKKGNLVYIIDFGLAKK  155 (299)
T ss_dssp             SCCCGGGEEECCGGGTTCEEECCCSSCEE
T ss_pred             ccCCHhhccccccCCCceeeeeccCccee
Confidence                 899865   356899999999864

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.42  E-value=1.7e-07  Score=53.03  Aligned_cols=76  Identities=14%  Similarity=0.044  Sum_probs=50.3

Q ss_pred             hHHHHHHHHhhCCCCcceeeeeeeeccEEEEEeccc-ccHHHHhccCCCCCCHHHHHHHHHHhH----------------
Q 034245           14 SMIREVSCLMELNHPNIIRLMLVVSQGLCLFLEYQA-NDLAYLLKYPKDSMDGYSIKFSSSDSL----------------   76 (100)
Q Consensus        14 ~~~~e~~~l~~l~h~~iv~l~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~----------------   76 (100)
                      .+.+|...+..+.|++++..++..  ..++++|+++ ....+ +.       ......+..|++                
T Consensus        60 ~~~~e~~~l~~l~~~~v~~~~~~~--~~~lvme~~~~~~~~~-l~-------~~~~~~i~~ql~~~l~~lH~~giiHrDi  129 (191)
T d1zara2          60 SARNEFRALQKLQGLAVPKVYAWE--GNAVLMELIDAKELYR-VR-------VENPDEVLDMILEEVAKFYHRGIVHGDL  129 (191)
T ss_dssp             HHHHHHHHHHHTTTSSSCCEEEEE--TTEEEEECCCCEEGGG-CC-------CSCHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             HHHHHHHHHHHccCCCcceEEEec--CCEEEEEeeccccccc-hh-------hHHHHHHHHHHHHHHHHHhhCCEEEccC
Confidence            456788889999999988766543  3478999999 44332 21       111223333333                


Q ss_pred             --hcccccCCCeEEEeecCCCCCCCC
Q 034245           77 --RCCLLSFGKTVKVADLQALDWPSH  100 (100)
Q Consensus        77 --~nil~~~~~~~ki~dfgl~~~~~~  100 (100)
                        +|++++.+ .++++|||+|...+|
T Consensus       130 KP~NILv~~~-~~~liDFG~a~~~~~  154 (191)
T d1zara2         130 SQYNVLVSEE-GIWIIDFPQSVEVGE  154 (191)
T ss_dssp             STTSEEEETT-EEEECCCTTCEETTS
T ss_pred             ChhheeeeCC-CEEEEECCCcccCCC
Confidence              89999854 588999999866543

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.38  E-value=2.9e-07  Score=56.46  Aligned_cols=86  Identities=22%  Similarity=0.376  Sum_probs=59.8

Q ss_pred             hhhHHHHHHHHhhCC-----------CCcceeeeeeee----ccEEEEEeccc--ccHHHHhc-cCCCCCCHHHHHHHHH
Q 034245           12 PSSMIREVSCLMELN-----------HPNIIRLMLVVS----QGLCLFLEYQA--NDLAYLLK-YPKDSMDGYSIKFSSS   73 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~-----------h~~iv~l~~~~~----~~~~lv~e~~~--~~l~~~l~-~~~~~~~~~~~~~~~~   73 (100)
                      ...+.+|+.+++.++           |+|++++++.+.    ...+.+++++.  +....... .....++...+..++.
T Consensus        53 ~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~  132 (362)
T d1q8ya_          53 TEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISK  132 (362)
T ss_dssp             HHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHH
Confidence            456788998887775           578999988876    44556666654  33333322 2223488888888888


Q ss_pred             HhH-------------------hcccccCCC------eEEEeecCCCCC
Q 034245           74 DSL-------------------RCCLLSFGK------TVKVADLQALDW   97 (100)
Q Consensus        74 ~~~-------------------~nil~~~~~------~~ki~dfgl~~~   97 (100)
                      |++                   +||+++.++      .+|++|||.+..
T Consensus       133 qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~  181 (362)
T d1q8ya_         133 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACW  181 (362)
T ss_dssp             HHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEE
T ss_pred             HHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeecccccc
Confidence            865                   899997554      599999999854

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.12  E-value=0.082  Score=29.98  Aligned_cols=45  Identities=9%  Similarity=-0.026  Sum_probs=29.1

Q ss_pred             chhhHHHHHHHHhhCC-CCcceeeeeeee--ccEEEEEeccc-ccHHHH
Q 034245           11 VPSSMIREVSCLMELN-HPNIIRLMLVVS--QGLCLFLEYQA-NDLAYL   55 (100)
Q Consensus        11 ~~~~~~~e~~~l~~l~-h~~iv~l~~~~~--~~~~lv~e~~~-~~l~~~   55 (100)
                      ....+.+|...+..+. +-.+-++.....  +..++++++.+ .++...
T Consensus        52 ~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~  100 (263)
T d1j7la_          52 TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEE  100 (263)
T ss_dssp             STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHH
T ss_pred             chhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEeccccccccc
Confidence            3446788988877663 323444555544  77899999998 555443

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=89.64  E-value=0.94  Score=25.19  Aligned_cols=38  Identities=18%  Similarity=0.052  Sum_probs=25.9

Q ss_pred             hhhHHHHHHHHhhCCC--Ccceeeeeeee--ccEEEEEeccc
Q 034245           12 PSSMIREVSCLMELNH--PNIIRLMLVVS--QGLCLFLEYQA   49 (100)
Q Consensus        12 ~~~~~~e~~~l~~l~h--~~iv~l~~~~~--~~~~lv~e~~~   49 (100)
                      ...+.+|...++.+..  ..+-+++....  +..++++++++
T Consensus        48 ~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~   89 (255)
T d1nd4a_          48 LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVP   89 (255)
T ss_dssp             TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCS
T ss_pred             HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeee
Confidence            3567889988877632  23444555545  77899999987