BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034253
MAYLLKTSIASHLRSHTQEKREDALSRRGYHVELGPREKALLADDPVLKRFKSHKKSVWR
LKRMGDVLTIVVVAGCCYEIYVKAVMREEARRQARGTESA

High Scoring Gene Products

Symbol, full name Information P value
SDH7
AT5G62575 		protein from Arabidopsis thaliana 2.1e-29
SDH7
AT3G47833 		protein from Arabidopsis thaliana 1.9e-28

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034253
        (100 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006710 - symbol:SDH7 "AT5G62575" species:37...   326  2.1e-29   1
TAIR|locus:505006388 - symbol:SDH7 "AT3G47833" species:37...   317  1.9e-28   1


>TAIR|locus:505006710 [details] [associations]
            symbol:SDH7 "AT5G62575" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005749
            "mitochondrial respiratory chain complex II" evidence=IDA]
            [GO:0006661 "phosphatidylinositol biosynthetic process"
            evidence=RCA] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB015469
            GO:GO:0005749 EMBL:BT025578 IPI:IPI00526339 RefSeq:NP_974982.1
            UniGene:At.29042 STRING:Q3E870 PaxDb:Q3E870 PRIDE:Q3E870
            EnsemblPlants:AT5G62575.2 GeneID:836378 KEGG:ath:AT5G62575
            TAIR:At5g62575 eggNOG:NOG255034 HOGENOM:HOG000240989
            InParanoid:Q3E870 OMA:RRGFHIE PhylomeDB:Q3E870
            ProtClustDB:CLSN2689045 BioCyc:ARA:AT3G47833-MONOMER
            Genevestigator:Q3E870 Uniprot:Q3E870
        Length = 100

 Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
 Identities = 67/93 (72%), Positives = 79/93 (84%)

Query:     1 MAYLLKT-SIASHLRSHTQEKREDALS--RRGYHVELGPREKALLADDPVLKRFKSHKKS 57
             MA+LL   SI+SHLRS + +K  DALS  RRG+H+E G REKALLA+D  LKRFKSHKKS
Sbjct:     1 MAFLLNNASISSHLRSSSSQKTGDALSISRRGFHIEPGTREKALLAEDSALKRFKSHKKS 60

Query:    58 VWRLKRMGDVLTIVVVAGCCYEIYVKAVMREEA 90
             V +LKR+GDVLT+VVVAGCCYEIYVKAVM++EA
Sbjct:    61 VHKLKRIGDVLTVVVVAGCCYEIYVKAVMKKEA 93


>TAIR|locus:505006388 [details] [associations]
            symbol:SDH7 "AT3G47833" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005749 "mitochondrial
            respiratory chain complex II" evidence=IDA] [GO:0048046 "apoplast"
            evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0048046 GO:GO:0005749
            HOGENOM:HOG000240989 ProtClustDB:CLSN2689045 EMBL:AF360297
            EMBL:AY113994 EMBL:AY084936 IPI:IPI00537584 RefSeq:NP_566894.1
            UniGene:At.3251 STRING:Q9C5E8 PaxDb:Q9C5E8 PRIDE:Q9C5E8
            EnsemblPlants:AT3G47833.1 GeneID:823938 KEGG:ath:AT3G47833
            TAIR:At3g47833 eggNOG:NOG245473 InParanoid:Q9C5E8 OMA:MAFLLNT
            PhylomeDB:Q9C5E8 BioCyc:MetaCyc:AT3G47833-MONOMER
            ArrayExpress:Q9C5E8 Genevestigator:Q9C5E8 Uniprot:Q9C5E8
        Length = 93

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 67/93 (72%), Positives = 79/93 (84%)

Query:     1 MAYLLKTSIASHLRSHTQEKREDAL--SRRGYHVELGPREKALLADDPVLKRFKSHKKSV 58
             MA+LL TSI+SHLRS +Q K + AL  SRRG+HVELG REKALLA+D  L+RFKSHKK V
Sbjct:     1 MAFLLNTSISSHLRSSSQ-KTDGALAQSRRGFHVELGAREKALLAEDASLRRFKSHKKGV 59

Query:    59 WRLKRMGDVLTIVVVAGCCYEIYVKAVMREEAR 91
              RLKR+GDVLT+VVVAGCCYEIY + VMR+EA+
Sbjct:    60 HRLKRIGDVLTVVVVAGCCYEIYAR-VMRKEAQ 91


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.132   0.381    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      100       100   0.00091  102 3  11 22  0.50    29
                                                     29  0.47    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  538 (57 KB)
  Total size of DFA:  106 KB (2073 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.36u 0.09s 12.45t   Elapsed:  00:00:01
  Total cpu time:  12.36u 0.09s 12.45t   Elapsed:  00:00:01
  Start:  Fri May 10 19:09:11 2013   End:  Fri May 10 19:09:12 2013

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