BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034260
MGAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPLTPAAARYLIYGFLFF
FFLVLGYSVIYFRKMLYISGQTPKLIQATLFDLFFFFYSP

High Scoring Gene Products

Symbol, full name Information P value
AT5G51970 protein from Arabidopsis thaliana 1.3e-16
SORD
Uncharacterized protein
protein from Canis lupus familiaris 0.00055
Sodh-1
Sorbitol dehydrogenase 1
protein from Drosophila melanogaster 0.00093

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034260
        (100 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2173093 - symbol:AT5G51970 species:3702 "Arabi...   209  1.3e-16   1
UNIPROTKB|F1PXG0 - symbol:SORD "Uncharacterized protein" ...    94  0.00055   1
FB|FBgn0024289 - symbol:Sodh-1 "Sorbitol dehydrogenase 1"...    92  0.00093   1


>TAIR|locus:2173093 [details] [associations]
            symbol:AT5G51970 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
            [GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0005829
            "cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
            InterPro:IPR002085 InterPro:IPR002328 InterPro:IPR013149
            InterPro:IPR013154 Pfam:PF00107 Pfam:PF08240 PROSITE:PS00059
            InterPro:IPR016040 GO:GO:0005829 GO:GO:0009506 EMBL:CP002688
            GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0046872 GO:GO:0008270
            GO:GO:0016491 InterPro:IPR011032 PANTHER:PTHR11695 SUPFAM:SSF50129
            HSSP:O96496 EMBL:AB015478 UniGene:At.29648 UniGene:At.9328
            KO:K00008 OMA:CIECTGA EMBL:AF370161 EMBL:AY133848 EMBL:AK230367
            IPI:IPI00526124 RefSeq:NP_200010.1 RefSeq:NP_974925.1
            ProteinModelPortal:Q9FJ95 SMR:Q9FJ95 STRING:Q9FJ95 PRIDE:Q9FJ95
            EnsemblPlants:AT5G51970.1 EnsemblPlants:AT5G51970.2 GeneID:835272
            KEGG:ath:AT5G51970 TAIR:At5g51970 InParanoid:Q9FJ95
            PhylomeDB:Q9FJ95 ProtClustDB:PLN02702 Genevestigator:Q9FJ95
            Uniprot:Q9FJ95
        Length = 364

 Score = 209 (78.6 bits), Expect = 1.3e-16, P = 1.3e-16
 Identities = 41/51 (80%), Positives = 43/51 (84%)

Query:     1 MGAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPLTPAAAR 51
             MG+ IDV+FDCAG NKTMST L ATR G KVCLVGMGH  MTVPLTPAAAR
Sbjct:   251 MGSNIDVTFDCAGFNKTMSTALAATRCGGKVCLVGMGHGIMTVPLTPAAAR 301


>UNIPROTKB|F1PXG0 [details] [associations]
            symbol:SORD "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0051287 "NAD binding" evidence=IEA]
            [GO:0051160 "L-xylitol catabolic process" evidence=IEA] [GO:0046370
            "fructose biosynthetic process" evidence=IEA] [GO:0030317 "sperm
            motility" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
            [GO:0006062 "sorbitol catabolic process" evidence=IEA] [GO:0005739
            "mitochondrion" evidence=IEA] [GO:0003939 "L-iditol 2-dehydrogenase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR002085 InterPro:IPR002328
            InterPro:IPR013149 InterPro:IPR013154 Pfam:PF00107 Pfam:PF08240
            PROSITE:PS00059 InterPro:IPR016040 GO:GO:0005739 GO:GO:0019861
            Gene3D:3.40.50.720 GO:GO:0051287 GO:GO:0046872 GO:GO:0008270
            InterPro:IPR011032 PANTHER:PTHR11695 SUPFAM:SSF50129 GO:GO:0030317
            GeneTree:ENSGT00550000074781 KO:K00008 GO:GO:0003939 CTD:6652
            OMA:GNLCRYY GO:GO:0046370 GO:GO:0051160 GO:GO:0006062
            EMBL:AAEX03016095 RefSeq:XP_544659.2 Ensembl:ENSCAFT00000021685
            GeneID:487535 KEGG:cfa:487535 Uniprot:F1PXG0
        Length = 356

 Score = 94 (38.1 bits), Expect = 0.00055, P = 0.00055
 Identities = 19/51 (37%), Positives = 30/51 (58%)

Query:     1 MGAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPLTPAAAR 51
             +G   + + +C G+   + + + ATRAG  + LVG+G    TVPLT A+ R
Sbjct:   239 LGCKPEATIECTGVESAIQSGIYATRAGGTLVLVGLGSEMTTVPLTHASTR 289


>FB|FBgn0024289 [details] [associations]
            symbol:Sodh-1 "Sorbitol dehydrogenase 1" species:7227
            "Drosophila melanogaster" [GO:0003939 "L-iditol 2-dehydrogenase
            activity" evidence=NAS] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0055114 "oxidation-reduction process"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0016491 "oxidoreductase activity" evidence=IEA]
            InterPro:IPR002085 InterPro:IPR002328 InterPro:IPR013149
            InterPro:IPR013154 Pfam:PF00107 Pfam:PF08240 PROSITE:PS00059
            InterPro:IPR016040 EMBL:AE014297 GO:GO:0000166 Gene3D:3.40.50.720
            GO:GO:0046872 GO:GO:0008270 InterPro:IPR011032 PANTHER:PTHR11695
            SUPFAM:SSF50129 CTD:40836 EMBL:AE001572 HSSP:O96496 eggNOG:COG1063
            GeneTree:ENSGT00550000074781 KO:K00008 GO:GO:0003939 OMA:ISKKFFY
            OrthoDB:EOG4SF7NJ EMBL:AF002212 EMBL:BT044539 RefSeq:NP_477348.1
            UniGene:Dm.1082 SMR:O97479 STRING:O97479 EnsemblMetazoa:FBtr0081627
            GeneID:40836 KEGG:dme:Dmel_CG1982 UCSC:CG1982-RA
            FlyBase:FBgn0024289 InParanoid:O97479 GenomeRNAi:40836
            NextBio:820876 Uniprot:O97479
        Length = 360

 Score = 92 (37.4 bits), Expect = 0.00093, P = 0.00093
 Identities = 21/51 (41%), Positives = 28/51 (54%)

Query:     1 MGAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPLTPAAAR 51
             MG   D S DC G   +    + ATR+G  V +VGMG  ++ +PL  A AR
Sbjct:   237 MGGQPDKSIDCCGAESSARLAIFATRSGGIVVVVGMGAAEIKLPLINALAR 287


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.329   0.144   0.442    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      100        93   0.00091  102 3  11 22  0.41    29
                                                     29  0.41    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  501 (53 KB)
  Total size of DFA:  96 KB (2069 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.23u 0.18s 8.41t   Elapsed:  00:00:01
  Total cpu time:  8.23u 0.18s 8.41t   Elapsed:  00:00:01
  Start:  Fri May 10 19:16:32 2013   End:  Fri May 10 19:16:33 2013

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