Query 034260
Match_columns 100
No_of_seqs 155 out of 1081
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 19:49:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034260.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034260hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3m6i_A L-arabinitol 4-dehydrog 99.3 1.9E-11 6.4E-16 88.0 9.5 87 2-94 250-338 (363)
2 2h6e_A ADH-4, D-arabinose 1-de 99.2 2.8E-11 9.5E-16 86.6 8.7 87 2-95 236-323 (344)
3 1e3j_A NADP(H)-dependent ketos 99.2 5E-11 1.7E-15 85.5 9.7 87 2-94 238-326 (352)
4 4ej6_A Putative zinc-binding d 99.2 3.2E-11 1.1E-15 87.4 8.3 86 3-94 252-341 (370)
5 1pl8_A Human sorbitol dehydrog 99.2 7.5E-11 2.6E-15 84.8 9.7 87 3-95 241-329 (356)
6 4a2c_A Galactitol-1-phosphate 99.2 5.3E-11 1.8E-15 84.8 7.5 92 2-94 227-324 (346)
7 4eez_A Alcohol dehydrogenase 1 99.2 6.1E-11 2.1E-15 84.6 7.7 86 2-94 230-316 (348)
8 2dq4_A L-threonine 3-dehydroge 99.2 5.8E-11 2E-15 84.9 7.3 88 2-95 229-321 (343)
9 3jv7_A ADH-A; dehydrogenase, n 99.1 5.5E-11 1.9E-15 85.0 6.1 85 2-94 237-323 (345)
10 2b5w_A Glucose dehydrogenase; 99.1 5.7E-11 2E-15 85.4 6.2 86 4-95 242-336 (357)
11 1vj0_A Alcohol dehydrogenase, 99.1 3.4E-11 1.2E-15 87.4 4.5 88 2-95 265-358 (380)
12 2d8a_A PH0655, probable L-thre 99.1 1.4E-10 4.8E-15 83.1 7.5 87 2-94 234-326 (348)
13 1e3i_A Alcohol dehydrogenase, 99.1 1.8E-10 6.2E-15 83.2 7.9 88 4-95 265-356 (376)
14 3ip1_A Alcohol dehydrogenase, 99.1 3.4E-10 1.2E-14 82.7 9.0 87 2-94 280-374 (404)
15 3uog_A Alcohol dehydrogenase; 99.1 8.8E-11 3E-15 84.7 5.2 87 2-95 255-343 (363)
16 3s2e_A Zinc-containing alcohol 99.1 2.5E-10 8.6E-15 81.4 7.4 84 4-94 232-316 (340)
17 1f8f_A Benzyl alcohol dehydrog 99.1 2.3E-10 7.9E-15 82.5 7.1 87 4-95 258-350 (371)
18 1rjw_A ADH-HT, alcohol dehydro 99.1 2.6E-10 9E-15 81.4 7.3 85 4-95 230-315 (339)
19 3krt_A Crotonyl COA reductase; 99.1 3.4E-10 1.2E-14 83.9 7.5 87 2-95 312-400 (456)
20 2fzw_A Alcohol dehydrogenase c 99.1 7.8E-10 2.7E-14 79.7 8.7 88 3-94 259-352 (373)
21 3uko_A Alcohol dehydrogenase c 99.0 7.8E-10 2.7E-14 80.0 8.6 89 3-95 262-356 (378)
22 1cdo_A Alcohol dehydrogenase; 99.0 8E-10 2.7E-14 79.8 8.6 88 4-95 262-354 (374)
23 2jhf_A Alcohol dehydrogenase E 99.0 9E-10 3.1E-14 79.5 8.8 87 4-94 261-353 (374)
24 1jvb_A NAD(H)-dependent alcoho 99.0 3E-10 1E-14 81.3 5.9 86 3-95 239-326 (347)
25 4a0s_A Octenoyl-COA reductase/ 99.0 1.3E-09 4.3E-14 80.5 9.1 87 2-95 304-392 (447)
26 1p0f_A NADP-dependent alcohol 99.0 1.3E-09 4.6E-14 78.6 9.0 87 4-95 261-353 (373)
27 3two_A Mannitol dehydrogenase; 99.0 2.5E-10 8.5E-15 81.7 4.4 84 4-94 234-321 (348)
28 3qwb_A Probable quinone oxidor 99.0 7.1E-10 2.4E-14 78.9 6.2 90 2-94 215-310 (334)
29 2dph_A Formaldehyde dismutase; 99.0 3.5E-10 1.2E-14 82.4 4.6 86 3-94 253-370 (398)
30 1h2b_A Alcohol dehydrogenase; 99.0 6.7E-10 2.3E-14 80.0 5.8 83 2-94 252-337 (359)
31 2eih_A Alcohol dehydrogenase; 99.0 7.9E-10 2.7E-14 79.0 6.1 86 3-95 234-321 (343)
32 2hcy_A Alcohol dehydrogenase 1 99.0 1.1E-09 3.9E-14 78.3 6.4 85 4-95 238-324 (347)
33 1uuf_A YAHK, zinc-type alcohol 99.0 4E-10 1.4E-14 81.6 4.1 85 3-94 256-342 (369)
34 2cf5_A Atccad5, CAD, cinnamyl 98.9 4.6E-10 1.6E-14 80.8 3.7 83 4-94 244-328 (357)
35 1yqd_A Sinapyl alcohol dehydro 98.9 7.9E-10 2.7E-14 79.8 4.6 84 4-94 251-335 (366)
36 2cdc_A Glucose dehydrogenase g 98.9 6E-10 2.1E-14 80.3 3.8 86 3-94 245-342 (366)
37 3fpc_A NADP-dependent alcohol 98.9 1.1E-09 3.6E-14 78.6 4.9 87 2-94 233-328 (352)
38 1kol_A Formaldehyde dehydrogen 98.9 3.4E-09 1.2E-13 77.0 7.1 88 2-95 252-371 (398)
39 3pi7_A NADH oxidoreductase; gr 98.9 1.7E-09 5.6E-14 77.5 5.1 89 3-94 232-328 (349)
40 1gu7_A Enoyl-[acyl-carrier-pro 98.9 7.5E-09 2.6E-13 74.3 8.3 80 2-84 243-329 (364)
41 1piw_A Hypothetical zinc-type 98.9 5.3E-10 1.8E-14 80.4 2.1 83 4-94 243-329 (360)
42 1tt7_A YHFP; alcohol dehydroge 98.9 1.3E-09 4.5E-14 77.3 3.8 55 3-58 216-271 (330)
43 2j3h_A NADP-dependent oxidored 98.8 5E-09 1.7E-13 74.6 6.4 89 3-94 224-320 (345)
44 3jyn_A Quinone oxidoreductase; 98.8 3.2E-09 1.1E-13 75.3 5.3 91 2-95 207-304 (325)
45 3nx4_A Putative oxidoreductase 98.8 1.1E-09 3.8E-14 77.4 2.2 86 3-94 210-301 (324)
46 4dup_A Quinone oxidoreductase; 98.8 5.4E-09 1.9E-13 75.0 5.9 89 2-95 233-332 (353)
47 3gaz_A Alcohol dehydrogenase s 98.8 9.1E-09 3.1E-13 73.6 6.9 90 2-95 214-310 (343)
48 4dvj_A Putative zinc-dependent 98.8 1.6E-08 5.5E-13 73.0 7.6 55 2-59 237-291 (363)
49 4a27_A Synaptic vesicle membra 98.8 4.4E-09 1.5E-13 75.3 4.4 91 2-95 206-321 (349)
50 3fbg_A Putative arginate lyase 98.8 1.5E-08 5.2E-13 72.4 6.9 86 2-91 215-309 (346)
51 4b7c_A Probable oxidoreductase 98.8 1.9E-08 6.5E-13 71.5 6.7 90 2-94 216-314 (336)
52 1wly_A CAAR, 2-haloacrylate re 98.7 9E-09 3.1E-13 73.1 5.1 90 2-95 212-310 (333)
53 1zsy_A Mitochondrial 2-enoyl t 98.7 4.2E-08 1.5E-12 70.4 8.6 88 4-94 240-335 (357)
54 2j8z_A Quinone oxidoreductase; 98.7 1.9E-08 6.4E-13 72.3 5.9 87 3-94 230-330 (354)
55 4eye_A Probable oxidoreductase 98.7 9.3E-09 3.2E-13 73.5 4.3 88 3-94 226-320 (342)
56 1iz0_A Quinone oxidoreductase; 98.7 8.1E-09 2.8E-13 72.5 3.7 88 3-94 188-280 (302)
57 1xa0_A Putative NADPH dependen 98.7 6.7E-09 2.3E-13 73.6 3.2 55 3-58 215-270 (328)
58 1yb5_A Quinone oxidoreductase; 98.7 4.4E-08 1.5E-12 70.4 7.0 87 3-95 238-329 (351)
59 1qor_A Quinone oxidoreductase; 98.7 4.2E-08 1.4E-12 69.4 6.1 89 3-94 208-305 (327)
60 3tqh_A Quinone oxidoreductase; 98.6 2.4E-08 8.4E-13 70.6 4.7 85 3-95 214-299 (321)
61 2zb4_A Prostaglandin reductase 98.5 2.1E-07 7.1E-12 66.6 6.7 88 4-94 230-329 (357)
62 2c0c_A Zinc binding alcohol de 98.5 1.4E-07 4.7E-12 68.0 5.2 80 2-85 229-321 (362)
63 1v3u_A Leukotriene B4 12- hydr 98.5 4.7E-07 1.6E-11 64.1 7.8 80 3-85 213-302 (333)
64 3goh_A Alcohol dehydrogenase, 98.4 1.8E-08 6.1E-13 71.1 -1.5 88 2-94 197-293 (315)
65 3gqv_A Enoyl reductase; medium 98.3 5.1E-07 1.7E-11 65.2 5.0 56 3-58 230-295 (371)
66 3gms_A Putative NADPH:quinone 98.2 1.7E-07 5.7E-12 66.8 0.4 91 2-95 211-309 (340)
67 1pqw_A Polyketide synthase; ro 98.1 2.4E-06 8.1E-11 56.2 4.6 53 3-57 106-160 (198)
68 3slk_A Polyketide synthase ext 98.1 2.4E-06 8.2E-11 67.5 4.2 89 2-94 410-501 (795)
69 2vn8_A Reticulon-4-interacting 98.0 5.9E-06 2E-10 59.5 4.3 88 3-95 247-353 (375)
70 3iup_A Putative NADPH:quinone 97.8 2.9E-06 1E-10 61.4 -0.5 56 3-59 239-310 (379)
71 2vz8_A Fatty acid synthase; tr 97.5 8.4E-05 2.9E-09 64.8 4.4 57 2-59 1738-1795(2512)
72 1pjc_A Protein (L-alanine dehy 96.5 0.001 3.6E-08 47.9 2.0 54 4-57 230-296 (361)
73 2eez_A Alanine dehydrogenase; 96.3 0.001 3.6E-08 48.0 1.3 54 4-57 229-295 (369)
74 1l7d_A Nicotinamide nucleotide 96.0 0.002 6.9E-08 46.7 1.5 72 4-81 257-338 (384)
75 1x13_A NAD(P) transhydrogenase 95.3 0.0081 2.8E-07 44.0 2.4 71 4-80 255-336 (401)
76 2vhw_A Alanine dehydrogenase; 95.3 0.0064 2.2E-07 44.0 1.8 55 4-58 231-298 (377)
77 3ce6_A Adenosylhomocysteinase; 95.2 0.011 3.9E-07 44.6 2.9 52 4-57 329-384 (494)
78 2yvl_A TRMI protein, hypotheti 93.0 0.12 4E-06 34.2 4.1 34 3-36 157-191 (248)
79 3pym_A GAPDH 3, glyceraldehyde 91.2 0.14 4.8E-06 36.9 2.8 38 3-40 88-125 (332)
80 3v1y_O PP38, glyceraldehyde-3- 91.1 0.12 4E-06 37.4 2.4 37 4-40 93-129 (337)
81 3fpf_A Mtnas, putative unchara 90.7 0.29 9.9E-06 34.6 4.1 35 3-37 187-224 (298)
82 2nyu_A Putative ribosomal RNA 90.7 0.15 5.1E-06 32.4 2.4 34 4-37 97-147 (196)
83 1u8f_O GAPDH, glyceraldehyde-3 89.4 0.21 7.3E-06 35.7 2.6 38 3-40 90-127 (335)
84 3h9e_O Glyceraldehyde-3-phosph 88.2 0.32 1.1E-05 35.2 2.8 37 4-40 94-130 (346)
85 2x5j_O E4PDH, D-erythrose-4-ph 88.1 0.26 8.7E-06 35.4 2.3 35 4-38 92-126 (339)
86 3doc_A Glyceraldehyde 3-phosph 87.8 0.24 8.3E-06 35.7 2.0 37 3-39 90-126 (335)
87 1rm4_O Glyceraldehyde 3-phosph 87.8 0.25 8.5E-06 35.5 2.0 36 4-39 91-126 (337)
88 3ids_C GAPDH, glyceraldehyde-3 87.5 0.24 8.1E-06 36.1 1.8 36 4-39 103-138 (359)
89 3e05_A Precorrin-6Y C5,15-meth 87.3 1.2 4.1E-05 28.4 5.0 34 4-37 108-144 (204)
90 3lvf_P GAPDH 1, glyceraldehyde 87.0 0.31 1.1E-05 35.2 2.1 37 3-39 90-126 (338)
91 2ep7_A GAPDH, glyceraldehyde-3 86.2 0.31 1.1E-05 35.2 1.8 37 4-40 89-125 (342)
92 1gpj_A Glutamyl-tRNA reductase 85.8 0.36 1.2E-05 35.1 2.0 35 4-38 227-267 (404)
93 1nvm_B Acetaldehyde dehydrogen 85.5 0.68 2.3E-05 32.6 3.3 31 3-33 70-102 (312)
94 4dib_A GAPDH, glyceraldehyde 3 85.3 0.3 1E-05 35.4 1.3 37 3-39 90-126 (345)
95 3gvp_A Adenosylhomocysteinase 85.0 0.36 1.2E-05 36.0 1.7 38 4-41 275-313 (435)
96 1gad_O D-glyceraldehyde-3-phos 84.9 0.36 1.2E-05 34.5 1.6 35 4-38 88-122 (330)
97 2d2i_A Glyceraldehyde 3-phosph 84.8 0.43 1.5E-05 34.9 2.0 36 4-39 91-126 (380)
98 3njr_A Precorrin-6Y methylase; 84.8 1.5 5.1E-05 28.4 4.5 35 4-38 122-157 (204)
99 1obf_O Glyceraldehyde 3-phosph 84.7 0.55 1.9E-05 33.8 2.5 37 3-39 90-126 (335)
100 3hm2_A Precorrin-6Y C5,15-meth 84.1 1.4 4.6E-05 27.2 3.9 36 3-38 93-130 (178)
101 3b1j_A Glyceraldehyde 3-phosph 84.0 0.56 1.9E-05 33.7 2.3 36 4-39 91-126 (339)
102 1p91_A Ribosomal RNA large sub 84.0 0.27 9.4E-06 32.9 0.6 33 4-37 148-180 (269)
103 3e5r_O PP38, glyceraldehyde-3- 83.6 0.56 1.9E-05 33.6 2.2 36 4-39 93-128 (337)
104 3tfw_A Putative O-methyltransf 83.2 1.3 4.6E-05 29.5 3.8 34 4-37 136-172 (248)
105 1ej0_A FTSJ; methyltransferase 82.1 1.4 4.8E-05 26.7 3.4 36 4-39 88-140 (180)
106 2yv3_A Aspartate-semialdehyde 81.0 1.5 5.2E-05 31.1 3.6 34 4-37 61-94 (331)
107 2hnk_A SAM-dependent O-methylt 80.7 1.4 4.9E-05 28.9 3.2 33 3-35 146-181 (239)
108 3eey_A Putative rRNA methylase 80.5 1.5 5E-05 27.7 3.1 36 3-38 92-142 (197)
109 2yxe_A Protein-L-isoaspartate 80.4 0.39 1.3E-05 31.0 0.3 32 4-35 146-177 (215)
110 2g1u_A Hypothetical protein TM 80.1 1.1 3.8E-05 27.6 2.4 37 3-39 83-120 (155)
111 2pbf_A Protein-L-isoaspartate 79.2 0.49 1.7E-05 30.8 0.5 32 4-35 162-193 (227)
112 2b4r_O Glyceraldehyde-3-phosph 79.0 0.95 3.2E-05 32.7 2.0 36 4-39 99-134 (345)
113 2gpy_A O-methyltransferase; st 78.8 1.2 4E-05 29.1 2.3 33 3-35 125-160 (233)
114 2g82_O GAPDH, glyceraldehyde-3 78.6 0.7 2.4E-05 33.1 1.2 36 4-39 86-121 (331)
115 3cps_A Glyceraldehyde 3-phosph 78.2 1.3 4.3E-05 32.1 2.4 37 3-39 104-140 (354)
116 1j5p_A Aspartate dehydrogenase 77.8 3.7 0.00013 28.3 4.6 34 4-37 60-93 (253)
117 1b7g_O Protein (glyceraldehyde 77.5 2.5 8.6E-05 30.1 3.8 35 4-38 77-111 (340)
118 2r00_A Aspartate-semialdehyde 77.5 2.9 0.0001 29.6 4.2 34 4-37 65-98 (336)
119 2hjs_A USG-1 protein homolog; 77.4 4 0.00014 29.0 4.9 35 4-38 68-102 (340)
120 1r18_A Protein-L-isoaspartate( 77.1 0.58 2E-05 30.6 0.4 31 4-34 163-193 (227)
121 3oj0_A Glutr, glutamyl-tRNA re 77.0 0.5 1.7E-05 28.9 0.0 34 4-38 80-113 (144)
122 1t4b_A Aspartate-semialdehyde 76.9 2.5 8.7E-05 30.4 3.8 35 4-38 65-99 (367)
123 3h9u_A Adenosylhomocysteinase; 76.9 0.98 3.4E-05 33.6 1.6 52 4-57 266-318 (436)
124 3lbf_A Protein-L-isoaspartate 76.3 0.48 1.6E-05 30.4 -0.2 31 4-34 143-173 (210)
125 2pwy_A TRNA (adenine-N(1)-)-me 76.0 1.4 4.8E-05 29.0 2.1 33 4-36 166-199 (258)
126 2ozp_A N-acetyl-gamma-glutamyl 75.9 2.9 9.9E-05 29.8 3.8 35 3-37 67-101 (345)
127 1i1n_A Protein-L-isoaspartate 75.9 0.64 2.2E-05 30.2 0.3 32 4-35 151-182 (226)
128 1i9g_A Hypothetical protein RV 75.6 1.5 5.2E-05 29.3 2.2 34 4-37 171-205 (280)
129 3cea_A MYO-inositol 2-dehydrog 75.2 17 0.0006 25.0 8.0 38 4-45 71-108 (346)
130 3pwk_A Aspartate-semialdehyde 75.1 3.9 0.00013 29.6 4.3 34 4-37 64-97 (366)
131 1jg1_A PIMT;, protein-L-isoasp 74.3 0.72 2.5E-05 30.4 0.3 32 4-35 158-189 (235)
132 2fk8_A Methoxy mycolic acid sy 74.0 4.8 0.00016 27.4 4.5 34 4-37 155-196 (318)
133 3mti_A RRNA methylase; SAM-dep 73.6 2.1 7.1E-05 26.7 2.3 23 16-38 116-138 (185)
134 2pxx_A Uncharacterized protein 73.3 2.5 8.5E-05 26.7 2.7 24 15-38 139-162 (215)
135 2ld4_A Anamorsin; methyltransf 72.8 3.4 0.00012 25.6 3.2 31 4-34 63-100 (176)
136 1fbn_A MJ fibrillarin homologu 72.5 2.9 0.0001 27.3 2.9 31 4-34 143-177 (230)
137 3cmc_O GAPDH, glyceraldehyde-3 72.4 1.5 5E-05 31.4 1.5 36 4-39 88-123 (334)
138 2yyy_A Glyceraldehyde-3-phosph 72.1 4.4 0.00015 28.9 4.0 35 4-39 81-116 (343)
139 1wg8_A Predicted S-adenosylmet 71.9 2 7E-05 30.2 2.1 23 16-38 214-236 (285)
140 2dc1_A L-aspartate dehydrogena 71.7 5.8 0.0002 26.2 4.3 33 3-36 49-81 (236)
141 1vl5_A Unknown conserved prote 71.7 3.7 0.00013 27.1 3.3 33 3-35 102-140 (260)
142 3mb5_A SAM-dependent methyltra 71.7 2.4 8.3E-05 27.9 2.4 33 4-36 162-195 (255)
143 1g8a_A Fibrillarin-like PRE-rR 71.6 3.6 0.00012 26.6 3.2 31 4-34 143-177 (227)
144 3tz6_A Aspartate-semialdehyde 71.6 4.8 0.00016 28.8 4.1 34 4-37 63-96 (344)
145 1hdg_O Holo-D-glyceraldehyde-3 71.5 1.6 5.4E-05 31.2 1.5 36 4-39 89-124 (332)
146 3duw_A OMT, O-methyltransferas 71.2 7 0.00024 25.0 4.6 34 4-37 133-169 (223)
147 1o54_A SAM-dependent O-methylt 71.0 2.3 7.8E-05 28.6 2.2 33 4-36 181-214 (277)
148 1cf2_P Protein (glyceraldehyde 70.9 3.2 0.00011 29.5 3.0 34 4-38 78-111 (337)
149 3cbg_A O-methyltransferase; cy 70.8 2.7 9.3E-05 27.6 2.5 33 3-35 147-182 (232)
150 3tka_A Ribosomal RNA small sub 70.1 2.3 7.8E-05 30.8 2.1 23 16-38 255-277 (347)
151 1kpg_A CFA synthase;, cyclopro 69.4 8.1 0.00028 25.8 4.7 33 4-36 129-169 (287)
152 1vbf_A 231AA long hypothetical 69.0 1.2 4E-05 29.0 0.3 33 4-36 134-166 (231)
153 4dpl_A Malonyl-COA/succinyl-CO 68.7 5.7 0.00019 28.5 3.9 35 4-38 79-113 (359)
154 4dpk_A Malonyl-COA/succinyl-CO 68.7 5.7 0.00019 28.5 3.9 35 4-38 79-113 (359)
155 2ep5_A 350AA long hypothetical 68.6 6 0.00021 28.1 4.0 32 4-35 77-108 (350)
156 3dr3_A N-acetyl-gamma-glutamyl 68.2 7 0.00024 27.8 4.3 36 3-38 74-109 (337)
157 2kw5_A SLR1183 protein; struct 67.8 4.7 0.00016 25.4 3.1 35 4-38 94-134 (202)
158 3ujc_A Phosphoethanolamine N-m 67.7 3.1 0.00011 27.2 2.3 35 3-37 119-161 (266)
159 3vc1_A Geranyl diphosphate 2-C 67.6 5 0.00017 27.4 3.4 35 3-37 184-223 (312)
160 3ou2_A SAM-dependent methyltra 67.4 5.5 0.00019 25.1 3.4 36 3-38 106-149 (218)
161 1l3i_A Precorrin-6Y methyltran 67.4 5 0.00017 24.6 3.1 33 4-36 100-135 (192)
162 2yxl_A PH0851 protein, 450AA l 67.4 4.3 0.00015 29.7 3.2 23 15-37 369-391 (450)
163 2czc_A Glyceraldehyde-3-phosph 67.3 5.1 0.00018 28.2 3.4 34 4-38 79-112 (334)
164 3hja_A GAPDH, glyceraldehyde-3 67.2 1.1 3.8E-05 32.5 -0.0 36 4-39 107-147 (356)
165 2avd_A Catechol-O-methyltransf 66.5 4.6 0.00016 26.0 2.9 34 3-36 144-180 (229)
166 3d4o_A Dipicolinate synthase s 65.7 7.3 0.00025 26.7 3.9 51 4-56 213-263 (293)
167 3ond_A Adenosylhomocysteinase; 65.6 1.9 6.4E-05 32.5 0.9 37 4-40 320-357 (488)
168 3f4k_A Putative methyltransfer 65.3 2.8 9.4E-05 27.5 1.6 32 4-35 114-150 (257)
169 1xyg_A Putative N-acetyl-gamma 64.8 5.5 0.00019 28.5 3.2 32 4-36 82-113 (359)
170 1ys4_A Aspartate-semialdehyde 64.8 7.5 0.00026 27.6 3.9 32 4-35 83-114 (354)
171 2nxc_A L11 mtase, ribosomal pr 64.3 4.2 0.00014 27.2 2.4 35 4-38 184-221 (254)
172 3sm3_A SAM-dependent methyltra 64.0 2.9 0.0001 26.8 1.5 35 4-38 101-144 (235)
173 3tr6_A O-methyltransferase; ce 63.4 6.8 0.00023 25.1 3.2 34 3-36 139-175 (225)
174 3n58_A Adenosylhomocysteinase; 63.3 3.9 0.00013 30.7 2.2 36 4-39 302-338 (464)
175 3m33_A Uncharacterized protein 63.2 1.7 5.9E-05 28.3 0.3 35 3-37 110-144 (226)
176 4dio_A NAD(P) transhydrogenase 62.9 3.1 0.00011 30.6 1.6 54 4-57 275-337 (405)
177 1nkv_A Hypothetical protein YJ 61.9 3.2 0.00011 27.2 1.4 33 3-35 102-140 (256)
178 3ic5_A Putative saccharopine d 61.8 8.7 0.0003 21.6 3.3 12 4-15 69-80 (118)
179 1p9l_A Dihydrodipicolinate red 61.7 5.2 0.00018 27.2 2.5 34 4-38 45-78 (245)
180 1sqg_A SUN protein, FMU protei 61.6 5.7 0.00019 28.8 2.8 20 16-35 355-374 (429)
181 2gb4_A Thiopurine S-methyltran 61.5 7.2 0.00025 26.2 3.2 34 3-36 151-192 (252)
182 1xxl_A YCGJ protein; structura 61.4 7.9 0.00027 25.2 3.3 34 4-37 87-126 (239)
183 3pzr_A Aspartate-semialdehyde 61.4 9.2 0.00031 27.6 3.9 26 4-29 64-89 (370)
184 1dih_A Dihydrodipicolinate red 61.1 9.8 0.00034 26.1 3.9 34 4-38 72-105 (273)
185 2yqz_A Hypothetical protein TT 60.5 8 0.00027 25.2 3.2 31 4-34 104-140 (263)
186 1sui_A Caffeoyl-COA O-methyltr 60.5 14 0.00048 24.5 4.5 33 3-35 155-190 (247)
187 3hem_A Cyclopropane-fatty-acyl 59.9 15 0.00053 24.7 4.7 23 16-38 164-186 (302)
188 3dr5_A Putative O-methyltransf 59.9 7.3 0.00025 25.5 2.9 33 3-35 128-163 (221)
189 3h2b_A SAM-dependent methyltra 59.2 8.5 0.00029 24.1 3.1 34 4-37 102-143 (203)
190 2o57_A Putative sarcosine dime 59.1 8.8 0.0003 25.7 3.3 33 4-36 150-188 (297)
191 3dh0_A SAM dependent methyltra 58.9 9.3 0.00032 24.2 3.3 34 4-37 106-145 (219)
192 3lcc_A Putative methyl chlorid 58.5 11 0.00036 24.4 3.5 35 4-38 132-174 (235)
193 3cvo_A Methyltransferase-like 58.2 11 0.00036 24.9 3.5 30 4-33 122-152 (202)
194 2rir_A Dipicolinate synthase, 58.1 10 0.00034 26.0 3.5 51 4-56 215-265 (300)
195 3kkz_A Uncharacterized protein 58.0 5 0.00017 26.6 1.9 33 4-36 114-151 (267)
196 2bm8_A Cephalosporin hydroxyla 57.9 17 0.0006 23.8 4.6 32 4-35 152-187 (236)
197 3e23_A Uncharacterized protein 57.7 8.4 0.00029 24.4 2.9 33 3-35 101-141 (211)
198 1ixk_A Methyltransferase; open 57.4 8.8 0.0003 26.6 3.1 21 16-36 227-247 (315)
199 3i9f_A Putative type 11 methyl 57.0 11 0.00037 22.9 3.2 35 4-38 75-115 (170)
200 3dlc_A Putative S-adenosyl-L-m 56.9 13 0.00045 23.2 3.7 35 4-38 111-151 (219)
201 2p35_A Trans-aconitate 2-methy 56.3 8.2 0.00028 25.1 2.7 32 4-35 95-132 (259)
202 3m4x_A NOL1/NOP2/SUN family pr 56.3 9.5 0.00032 28.3 3.3 20 16-35 215-234 (456)
203 1dus_A MJ0882; hypothetical pr 56.2 12 0.00043 22.8 3.5 35 4-38 119-160 (194)
204 3mvn_A UDP-N-acetylmuramate:L- 56.1 14 0.00048 23.0 3.7 34 4-37 36-72 (163)
205 2plw_A Ribosomal RNA methyltra 56.0 5.8 0.0002 24.9 1.9 18 17-34 136-153 (201)
206 1m6y_A S-adenosyl-methyltransf 55.9 3.9 0.00013 28.6 1.1 23 16-38 226-248 (301)
207 3c3p_A Methyltransferase; NP_9 55.3 9.1 0.00031 24.3 2.8 31 5-35 127-160 (210)
208 3g07_A 7SK snRNA methylphospha 55.2 7.5 0.00026 26.4 2.4 31 4-34 177-219 (292)
209 1dl5_A Protein-L-isoaspartate 55.1 3 0.0001 28.8 0.4 32 4-35 144-175 (317)
210 3hsk_A Aspartate-semialdehyde 55.0 15 0.00052 26.6 4.1 34 4-37 93-126 (381)
211 2ip2_A Probable phenazine-spec 54.9 23 0.00079 24.2 4.9 35 3-37 232-274 (334)
212 4df3_A Fibrillarin-like rRNA/T 54.9 11 0.00037 25.4 3.2 31 4-34 147-181 (233)
213 3evz_A Methyltransferase; NYSG 54.8 9.6 0.00033 24.4 2.8 20 15-34 159-178 (230)
214 2xvm_A Tellurite resistance pr 54.5 11 0.00036 23.4 2.9 33 4-36 97-137 (199)
215 3bkw_A MLL3908 protein, S-aden 54.4 12 0.00042 23.9 3.3 32 4-35 107-144 (243)
216 3l8d_A Methyltransferase; stru 53.7 11 0.00036 24.3 2.9 35 3-37 115-155 (242)
217 1yb2_A Hypothetical protein TA 53.7 6.9 0.00024 26.3 2.0 33 4-36 179-212 (275)
218 3uw3_A Aspartate-semialdehyde 53.5 13 0.00044 27.0 3.5 26 4-29 68-93 (377)
219 3r3h_A O-methyltransferase, SA 53.2 11 0.00038 24.9 3.0 34 3-36 135-171 (242)
220 2ex4_A Adrenal gland protein A 52.1 14 0.00047 24.0 3.3 32 4-35 146-185 (241)
221 1f06_A MESO-diaminopimelate D- 52.0 12 0.00042 25.9 3.2 33 4-37 58-90 (320)
222 2i62_A Nicotinamide N-methyltr 51.9 11 0.00038 24.5 2.8 34 3-36 156-199 (265)
223 3bio_A Oxidoreductase, GFO/IDH 51.9 23 0.0008 24.3 4.6 31 4-35 65-95 (304)
224 3p2y_A Alanine dehydrogenase/p 51.5 7.1 0.00024 28.4 1.9 53 4-56 265-326 (381)
225 3m70_A Tellurite resistance pr 51.3 9.6 0.00033 25.4 2.5 34 3-36 183-224 (286)
226 1nt2_A Fibrillarin-like PRE-rR 51.3 9.8 0.00033 24.6 2.4 31 4-34 126-160 (210)
227 3e8s_A Putative SAM dependent 51.2 10 0.00035 23.9 2.5 35 4-38 116-155 (227)
228 2zfu_A Nucleomethylin, cerebra 51.1 15 0.0005 23.3 3.2 34 4-37 115-153 (215)
229 3c3y_A Pfomt, O-methyltransfer 50.8 13 0.00046 24.3 3.1 32 4-35 147-181 (237)
230 3ajd_A Putative methyltransfer 50.6 15 0.0005 24.8 3.3 22 15-36 191-212 (274)
231 2frx_A Hypothetical protein YE 50.5 15 0.00053 27.2 3.6 20 16-35 227-246 (479)
232 2nqt_A N-acetyl-gamma-glutamyl 50.4 12 0.0004 26.8 2.9 34 4-38 80-113 (352)
233 2pc6_A Probable acetolactate s 50.3 14 0.0005 23.6 3.1 29 6-34 121-149 (165)
234 3g5t_A Trans-aconitate 3-methy 50.0 15 0.00051 24.7 3.3 35 3-37 112-151 (299)
235 2gs9_A Hypothetical protein TT 49.9 16 0.00055 22.9 3.3 34 4-37 95-134 (211)
236 3mgg_A Methyltransferase; NYSG 49.9 15 0.00051 24.2 3.2 32 4-35 105-142 (276)
237 3dli_A Methyltransferase; PSI- 49.8 26 0.0009 22.5 4.4 33 4-36 101-141 (240)
238 4hg2_A Methyltransferase type 49.7 9.4 0.00032 25.8 2.2 35 4-38 99-138 (257)
239 1jw9_B Molybdopterin biosynthe 49.5 9 0.00031 25.7 2.1 27 4-30 121-147 (249)
240 1zx0_A Guanidinoacetate N-meth 49.3 9.6 0.00033 24.7 2.1 18 17-34 152-169 (236)
241 4dcm_A Ribosomal RNA large sub 48.8 12 0.00042 26.7 2.8 24 16-39 315-338 (375)
242 2f1f_A Acetolactate synthase i 48.7 20 0.00068 22.9 3.5 26 6-31 120-145 (164)
243 2ozv_A Hypothetical protein AT 48.6 18 0.00061 24.1 3.4 22 14-35 149-170 (260)
244 2b25_A Hypothetical protein; s 48.4 6.3 0.00022 27.3 1.2 33 4-36 187-220 (336)
245 3d2l_A SAM-dependent methyltra 48.0 12 0.00041 24.0 2.5 31 3-33 95-135 (243)
246 1ve3_A Hypothetical protein PH 48.0 17 0.00059 22.9 3.2 32 4-35 103-142 (227)
247 1vpd_A Tartronate semialdehyde 48.0 27 0.00091 23.4 4.3 32 4-35 61-99 (299)
248 3sso_A Methyltransferase; macr 47.9 11 0.00038 27.8 2.5 32 4-35 288-324 (419)
249 1xtp_A LMAJ004091AAA; SGPP, st 47.9 17 0.0006 23.4 3.3 32 4-35 158-197 (254)
250 3cgg_A SAM-dependent methyltra 47.8 13 0.00043 22.7 2.5 32 4-35 107-147 (195)
251 3c8m_A Homoserine dehydrogenas 47.7 18 0.00062 25.4 3.5 29 4-32 86-118 (331)
252 3ou5_A Serine hydroxymethyltra 47.5 13 0.00045 28.1 2.8 28 12-39 128-155 (490)
253 3dou_A Ribosomal RNA large sub 47.5 8.9 0.0003 24.5 1.7 21 16-36 120-140 (191)
254 1ri5_A MRNA capping enzyme; me 47.5 17 0.00059 24.0 3.3 32 4-35 133-174 (298)
255 2fgc_A Acetolactate synthase, 47.3 17 0.00057 24.1 3.1 29 6-34 147-175 (193)
256 3pfg_A N-methyltransferase; N, 47.3 13 0.00044 24.4 2.6 32 3-34 109-150 (263)
257 2ipx_A RRNA 2'-O-methyltransfe 47.0 15 0.00052 23.7 2.8 31 4-34 147-181 (233)
258 3ntv_A MW1564 protein; rossman 46.8 15 0.00052 23.8 2.9 33 3-35 141-176 (232)
259 3g5l_A Putative S-adenosylmeth 46.8 18 0.00062 23.4 3.2 32 3-34 107-144 (253)
260 2qm3_A Predicted methyltransfe 46.7 20 0.0007 25.3 3.7 35 4-38 241-280 (373)
261 1yzh_A TRNA (guanine-N(7)-)-me 46.5 35 0.0012 21.6 4.6 21 15-35 136-156 (214)
262 3tl2_A Malate dehydrogenase; c 46.5 19 0.00065 25.2 3.4 34 4-37 78-129 (315)
263 3c85_A Putative glutathione-re 46.5 25 0.00087 21.7 3.8 31 4-34 105-138 (183)
264 1guz_A Malate dehydrogenase; o 46.4 27 0.00093 24.1 4.2 33 4-36 69-119 (310)
265 2v6b_A L-LDH, L-lactate dehydr 46.1 32 0.0011 23.7 4.5 33 4-36 67-117 (304)
266 3ew7_A LMO0794 protein; Q8Y8U8 45.8 43 0.0015 20.8 4.9 34 4-37 61-104 (221)
267 4htf_A S-adenosylmethionine-de 45.5 19 0.00066 23.9 3.3 33 3-35 135-173 (285)
268 2p8j_A S-adenosylmethionine-de 44.9 15 0.0005 23.0 2.5 34 4-37 89-130 (209)
269 4f3y_A DHPR, dihydrodipicolina 44.8 24 0.00081 24.3 3.6 34 4-38 73-106 (272)
270 1ebf_A Homoserine dehydrogenas 44.4 12 0.00041 26.8 2.1 29 5-34 85-113 (358)
271 1ws6_A Methyltransferase; stru 44.1 17 0.00057 21.8 2.6 35 4-38 110-150 (171)
272 3mcz_A O-methyltransferase; ad 43.7 21 0.00073 24.5 3.3 35 3-37 247-289 (352)
273 3ijp_A DHPR, dihydrodipicolina 43.6 26 0.00089 24.4 3.7 34 4-38 88-121 (288)
274 3dfz_A SIRC, precorrin-2 dehyd 43.3 40 0.0014 22.5 4.5 51 4-55 91-142 (223)
275 3g89_A Ribosomal RNA small sub 43.2 18 0.0006 24.1 2.7 33 3-35 150-184 (249)
276 3thr_A Glycine N-methyltransfe 43.1 23 0.00078 23.5 3.3 21 14-34 154-174 (293)
277 2p7i_A Hypothetical protein; p 43.0 19 0.00066 22.9 2.9 32 4-35 103-141 (250)
278 3ccf_A Cyclopropane-fatty-acyl 42.2 24 0.00084 23.3 3.4 32 4-35 117-154 (279)
279 2vdw_A Vaccinia virus capping 42.1 22 0.00075 24.4 3.2 31 4-34 129-168 (302)
280 2aot_A HMT, histamine N-methyl 42.0 12 0.00042 25.1 1.8 32 4-35 135-172 (292)
281 3hnr_A Probable methyltransfer 42.0 25 0.00084 22.1 3.2 32 4-35 106-145 (220)
282 1o9g_A RRNA methyltransferase; 41.7 23 0.0008 23.1 3.2 23 16-38 195-217 (250)
283 2cmg_A Spermidine synthase; tr 41.6 14 0.00049 24.9 2.1 32 4-35 139-171 (262)
284 2glx_A 1,5-anhydro-D-fructose 41.5 50 0.0017 22.4 4.9 30 4-34 62-91 (332)
285 3ocj_A Putative exported prote 41.5 28 0.00095 23.5 3.6 35 4-38 187-230 (305)
286 3ggd_A SAM-dependent methyltra 41.1 24 0.0008 22.8 3.1 34 5-38 125-166 (245)
287 3upl_A Oxidoreductase; rossman 41.1 32 0.0011 25.5 4.0 29 4-32 107-136 (446)
288 3m6w_A RRNA methylase; rRNA me 41.0 22 0.00074 26.4 3.1 20 16-35 210-229 (464)
289 1mjf_A Spermidine synthase; sp 40.9 22 0.00074 24.1 2.9 21 15-35 173-193 (281)
290 2p41_A Type II methyltransfera 40.3 35 0.0012 23.5 4.0 17 17-33 173-189 (305)
291 3jwh_A HEN1; methyltransferase 39.5 29 0.001 21.9 3.3 31 4-34 102-140 (217)
292 1vm6_A DHPR, dihydrodipicolina 39.5 18 0.00061 24.5 2.3 34 4-38 53-86 (228)
293 2cvz_A Dehydrogenase, 3-hydrox 39.4 41 0.0014 22.2 4.2 32 4-35 55-90 (289)
294 3grz_A L11 mtase, ribosomal pr 39.3 7.3 0.00025 24.6 0.3 36 3-38 124-162 (205)
295 2g72_A Phenylethanolamine N-me 39.2 12 0.00041 25.0 1.4 31 5-35 175-215 (289)
296 3qy9_A DHPR, dihydrodipicolina 39.1 32 0.0011 23.2 3.5 32 4-38 54-85 (243)
297 4dmg_A Putative uncharacterize 38.9 29 0.001 25.0 3.5 24 16-39 307-330 (393)
298 3bus_A REBM, methyltransferase 38.8 23 0.00079 23.2 2.8 33 4-36 129-167 (273)
299 1xj5_A Spermidine synthase 1; 38.6 26 0.0009 24.6 3.2 31 4-34 194-234 (334)
300 1iy9_A Spermidine synthase; ro 38.4 24 0.00084 23.8 2.9 33 4-36 148-190 (275)
301 1pjz_A Thiopurine S-methyltran 38.4 20 0.0007 22.7 2.4 32 4-35 101-140 (203)
302 2d4a_B Malate dehydrogenase; a 38.4 30 0.001 23.9 3.4 33 4-36 67-117 (308)
303 3adn_A Spermidine synthase; am 38.3 25 0.00086 24.2 3.0 32 4-35 157-198 (294)
304 1tlt_A Putative oxidoreductase 38.0 40 0.0014 22.9 4.0 30 4-34 65-94 (319)
305 3i23_A Oxidoreductase, GFO/IDH 37.7 60 0.002 22.4 4.9 38 4-45 65-102 (349)
306 1inl_A Spermidine synthase; be 37.6 24 0.00081 24.2 2.7 22 15-36 185-206 (296)
307 3lst_A CALO1 methyltransferase 37.4 28 0.00097 24.0 3.2 34 4-37 247-288 (348)
308 3ege_A Putative methyltransfer 37.4 54 0.0019 21.4 4.5 35 3-38 93-133 (261)
309 3orh_A Guanidinoacetate N-meth 37.3 12 0.00041 24.6 1.1 19 16-34 151-169 (236)
310 2vdv_E TRNA (guanine-N(7)-)-me 37.3 20 0.0007 23.4 2.3 20 16-35 154-173 (246)
311 3reo_A (ISO)eugenol O-methyltr 37.2 29 0.001 24.3 3.2 23 16-38 281-303 (368)
312 2b2c_A Spermidine synthase; be 36.9 26 0.00088 24.4 2.9 32 4-35 181-222 (314)
313 2frn_A Hypothetical protein PH 36.5 19 0.00065 24.2 2.1 34 4-37 192-227 (278)
314 2o07_A Spermidine synthase; st 36.1 23 0.00079 24.4 2.5 32 4-35 168-209 (304)
315 4a6d_A Hydroxyindole O-methylt 35.7 33 0.0011 24.0 3.3 22 16-37 264-285 (353)
316 2a14_A Indolethylamine N-methy 35.7 15 0.00051 24.4 1.4 34 4-37 156-199 (263)
317 3dmg_A Probable ribosomal RNA 35.5 26 0.0009 25.0 2.8 36 4-39 298-344 (381)
318 3ny7_A YCHM protein, sulfate t 35.2 21 0.00071 20.9 1.9 32 7-38 49-87 (118)
319 1ur5_A Malate dehydrogenase; o 35.2 57 0.002 22.4 4.4 12 4-15 70-81 (309)
320 3i53_A O-methyltransferase; CO 35.1 32 0.0011 23.5 3.1 35 4-38 235-277 (332)
321 1tw3_A COMT, carminomycin 4-O- 35.0 36 0.0012 23.4 3.4 22 16-37 269-290 (360)
322 4gek_A TRNA (CMO5U34)-methyltr 35.0 20 0.00067 24.1 2.0 19 16-34 159-177 (261)
323 2fca_A TRNA (guanine-N(7)-)-me 34.5 35 0.0012 21.8 3.1 21 15-35 133-153 (213)
324 2xyq_A Putative 2'-O-methyl tr 34.4 26 0.00089 24.3 2.5 22 16-37 152-173 (290)
325 2ejw_A HDH, homoserine dehydro 34.4 33 0.0011 24.2 3.1 30 4-33 66-96 (332)
326 3dp7_A SAM-dependent methyltra 34.3 35 0.0012 23.8 3.3 36 3-38 247-290 (363)
327 2g5c_A Prephenate dehydrogenas 34.2 82 0.0028 20.8 5.0 34 4-37 62-98 (281)
328 2h78_A Hibadh, 3-hydroxyisobut 34.1 77 0.0026 21.2 4.9 32 4-35 59-97 (302)
329 4hkt_A Inositol 2-dehydrogenas 34.0 44 0.0015 22.8 3.7 31 4-35 63-93 (331)
330 3dtn_A Putative methyltransfer 34.0 21 0.00073 22.7 2.0 34 4-37 109-150 (234)
331 3p9c_A Caffeic acid O-methyltr 34.0 35 0.0012 23.9 3.2 22 16-37 279-300 (364)
332 2kln_A Probable sulphate-trans 33.8 28 0.00097 20.4 2.4 33 6-38 50-90 (130)
333 4dzr_A Protein-(glutamine-N5) 33.7 28 0.00097 21.5 2.5 23 15-37 144-166 (215)
334 4fzv_A Putative methyltransfer 33.6 18 0.00063 25.9 1.7 19 17-35 266-284 (359)
335 2hjr_A Malate dehydrogenase; m 33.3 41 0.0014 23.5 3.4 33 4-36 82-132 (328)
336 3lpm_A Putative methyltransfer 33.1 22 0.00075 23.4 2.0 20 16-35 157-176 (259)
337 3g0o_A 3-hydroxyisobutyrate de 33.0 70 0.0024 21.6 4.6 32 4-35 64-102 (303)
338 4fsd_A Arsenic methyltransfera 32.8 38 0.0013 23.9 3.2 33 4-36 166-204 (383)
339 3id6_C Fibrillarin-like rRNA/T 32.7 40 0.0014 22.5 3.2 31 4-34 146-180 (232)
340 1jsx_A Glucose-inhibited divis 32.6 21 0.00073 22.3 1.7 31 4-35 132-165 (207)
341 1hyh_A L-hicdh, L-2-hydroxyiso 32.6 65 0.0022 21.9 4.4 13 4-16 69-81 (309)
342 3ezy_A Dehydrogenase; structur 32.5 48 0.0016 22.8 3.7 30 4-34 64-93 (344)
343 2yv1_A Succinyl-COA ligase [AD 32.5 64 0.0022 22.2 4.3 31 4-34 70-100 (294)
344 3euw_A MYO-inositol dehydrogen 32.5 43 0.0015 23.1 3.4 31 4-35 65-95 (344)
345 3bwc_A Spermidine synthase; SA 32.0 36 0.0012 23.3 3.0 34 4-37 169-212 (304)
346 3pef_A 6-phosphogluconate dehy 32.0 83 0.0028 21.0 4.8 32 4-35 57-95 (287)
347 1lc0_A Biliverdin reductase A; 31.8 45 0.0015 22.6 3.4 38 4-45 65-102 (294)
348 3e9m_A Oxidoreductase, GFO/IDH 31.7 42 0.0014 23.0 3.3 30 4-34 67-96 (330)
349 3oig_A Enoyl-[acyl-carrier-pro 31.6 38 0.0013 22.2 2.9 20 19-38 131-150 (266)
350 2uyy_A N-PAC protein; long-cha 31.5 64 0.0022 21.8 4.2 32 4-35 86-124 (316)
351 2i7c_A Spermidine synthase; tr 31.3 38 0.0013 22.9 3.0 34 3-36 150-193 (283)
352 1u2z_A Histone-lysine N-methyl 31.0 40 0.0014 24.8 3.1 32 4-35 323-359 (433)
353 1h4x_A SPOIIAA, anti-sigma F f 30.8 42 0.0014 19.0 2.8 28 10-38 56-84 (117)
354 3c0k_A UPF0064 protein YCCW; P 30.7 34 0.0012 24.2 2.7 24 15-38 319-342 (396)
355 3ing_A Homoserine dehydrogenas 30.7 62 0.0021 22.7 4.0 29 4-32 82-114 (325)
356 1fjh_A 3alpha-hydroxysteroid d 30.5 52 0.0018 21.2 3.4 35 4-38 62-116 (257)
357 3q2i_A Dehydrogenase; rossmann 30.4 57 0.002 22.5 3.8 30 4-34 75-104 (354)
358 2igt_A SAM dependent methyltra 30.3 82 0.0028 21.9 4.6 23 16-38 253-275 (332)
359 3db2_A Putative NADPH-dependen 30.1 47 0.0016 23.0 3.3 30 4-34 66-95 (354)
360 2nu8_A Succinyl-COA ligase [AD 30.1 48 0.0016 22.7 3.3 31 4-34 64-94 (288)
361 1g0o_A Trihydroxynaphthalene r 30.0 58 0.002 21.6 3.7 34 4-37 107-165 (283)
362 3mq2_A 16S rRNA methyltransfer 29.9 22 0.00075 22.5 1.5 20 15-34 120-139 (218)
363 3evn_A Oxidoreductase, GFO/IDH 29.9 57 0.0019 22.3 3.7 30 4-34 67-96 (329)
364 3mwd_B ATP-citrate synthase; A 29.8 53 0.0018 23.3 3.5 56 4-59 79-138 (334)
365 3dxy_A TRNA (guanine-N(7)-)-me 29.7 28 0.00094 22.6 2.0 21 16-36 131-151 (218)
366 4dll_A 2-hydroxy-3-oxopropiona 29.7 96 0.0033 21.2 4.8 33 4-36 87-125 (320)
367 1yqg_A Pyrroline-5-carboxylate 29.6 62 0.0021 21.1 3.7 29 4-33 57-85 (263)
368 3opn_A Putative hemolysin; str 29.4 40 0.0014 22.1 2.7 20 15-34 117-136 (232)
369 3t6o_A Sulfate transporter/ant 29.3 46 0.0016 19.2 2.8 33 6-38 50-91 (121)
370 3p2e_A 16S rRNA methylase; met 29.2 21 0.00072 23.3 1.3 18 16-33 120-137 (225)
371 4dgh_A Sulfate permease family 29.2 28 0.00097 20.4 1.8 33 6-38 51-91 (130)
372 2as0_A Hypothetical protein PH 29.1 28 0.00097 24.6 2.0 24 15-38 315-338 (396)
373 3bgv_A MRNA CAP guanine-N7 met 29.1 42 0.0014 22.6 2.9 31 4-34 114-154 (313)
374 3e18_A Oxidoreductase; dehydro 29.0 59 0.002 22.6 3.7 30 4-34 65-94 (359)
375 1r0k_A 1-deoxy-D-xylulose 5-ph 28.9 45 0.0015 24.3 3.1 29 5-33 94-122 (388)
376 1ydw_A AX110P-like protein; st 28.9 67 0.0023 22.2 4.0 30 4-34 71-100 (362)
377 2ho3_A Oxidoreductase, GFO/IDH 28.4 67 0.0023 21.8 3.8 31 4-35 62-92 (325)
378 3c1a_A Putative oxidoreductase 28.3 61 0.0021 22.0 3.6 30 4-34 69-98 (315)
379 3uuw_A Putative oxidoreductase 28.2 64 0.0022 21.7 3.7 30 4-34 66-95 (308)
380 3bzb_A Uncharacterized protein 28.1 1.1E+02 0.0037 20.4 4.8 36 3-38 162-208 (281)
381 1x19_A CRTF-related protein; m 28.0 43 0.0015 23.1 2.8 23 16-38 276-298 (359)
382 3nep_X Malate dehydrogenase; h 27.9 88 0.003 21.8 4.4 35 4-38 69-121 (314)
383 3ldh_A Lactate dehydrogenase; 27.9 58 0.002 23.0 3.5 35 3-37 88-140 (330)
384 3lvj_C Sulfurtransferase TUSA; 27.8 80 0.0028 17.2 4.0 52 4-56 8-65 (82)
385 3do5_A HOM, homoserine dehydro 27.7 57 0.002 22.9 3.4 25 4-28 80-108 (327)
386 1oi7_A Succinyl-COA synthetase 27.5 88 0.003 21.4 4.3 31 4-34 64-94 (288)
387 2qe6_A Uncharacterized protein 27.5 56 0.0019 21.9 3.2 24 15-38 176-199 (274)
388 3kux_A Putative oxidoreductase 27.3 57 0.0019 22.6 3.3 30 4-34 67-96 (352)
389 3mtj_A Homoserine dehydrogenas 27.2 51 0.0018 24.3 3.2 31 4-35 78-109 (444)
390 3rc1_A Sugar 3-ketoreductase; 27.2 67 0.0023 22.3 3.7 30 4-34 89-118 (350)
391 3mz0_A Inositol 2-dehydrogenas 27.1 67 0.0023 22.0 3.7 38 4-45 66-103 (344)
392 2hmt_A YUAA protein; RCK, KTN, 27.1 67 0.0023 18.3 3.3 12 4-15 70-81 (144)
393 2oxt_A Nucleoside-2'-O-methylt 26.9 81 0.0028 21.2 4.0 31 4-34 140-184 (265)
394 3gu3_A Methyltransferase; alph 26.9 31 0.0011 23.0 1.8 33 4-36 89-127 (284)
395 2pt6_A Spermidine synthase; tr 26.8 50 0.0017 22.9 3.0 32 4-35 189-230 (321)
396 3ec7_A Putative dehydrogenase; 26.7 68 0.0023 22.3 3.7 30 4-34 87-116 (357)
397 1uir_A Polyamine aminopropyltr 26.6 48 0.0016 22.8 2.8 21 15-35 175-195 (314)
398 2p2s_A Putative oxidoreductase 26.5 71 0.0024 21.8 3.7 38 4-45 66-103 (336)
399 1wxx_A TT1595, hypothetical pr 26.5 57 0.0019 23.0 3.3 23 16-38 306-328 (382)
400 1zcj_A Peroxisomal bifunctiona 26.4 74 0.0025 23.3 3.9 30 4-34 114-148 (463)
401 2ift_A Putative methylase HI07 26.3 43 0.0015 21.1 2.4 34 5-38 126-166 (201)
402 3p9n_A Possible methyltransfer 26.3 53 0.0018 20.2 2.8 35 3-37 112-155 (189)
403 3p7m_A Malate dehydrogenase; p 26.2 64 0.0022 22.5 3.4 35 3-37 72-124 (321)
404 3fhl_A Putative oxidoreductase 26.1 72 0.0024 22.2 3.7 30 4-34 65-94 (362)
405 2yv2_A Succinyl-COA synthetase 26.0 77 0.0026 21.8 3.8 30 5-34 72-101 (297)
406 3hp7_A Hemolysin, putative; st 26.0 37 0.0013 23.5 2.2 20 15-34 165-184 (291)
407 3e82_A Putative oxidoreductase 25.9 76 0.0026 22.1 3.8 38 4-45 67-104 (364)
408 3grk_A Enoyl-(acyl-carrier-pro 25.9 59 0.002 21.9 3.1 21 18-38 152-172 (293)
409 1zud_1 Adenylyltransferase THI 25.8 45 0.0015 22.2 2.5 23 4-26 118-140 (251)
410 3v2g_A 3-oxoacyl-[acyl-carrier 25.6 77 0.0026 21.0 3.7 34 4-37 109-167 (271)
411 3gdo_A Uncharacterized oxidore 25.5 64 0.0022 22.4 3.3 38 4-45 65-102 (358)
412 2i6t_A Ubiquitin-conjugating e 25.5 1.2E+02 0.004 20.9 4.7 34 3-36 76-126 (303)
413 3bxo_A N,N-dimethyltransferase 25.4 32 0.0011 21.8 1.6 33 3-35 99-141 (239)
414 4hyl_A Stage II sporulation pr 25.4 43 0.0015 19.0 2.1 33 6-38 44-84 (117)
415 3ggo_A Prephenate dehydrogenas 25.4 1.1E+02 0.0038 21.0 4.5 34 4-37 94-130 (314)
416 3f4l_A Putative oxidoreductase 25.4 66 0.0023 22.1 3.4 38 4-45 65-102 (345)
417 3ckk_A TRNA (guanine-N(7)-)-me 25.2 37 0.0013 22.3 2.0 20 16-35 149-168 (235)
418 1vlm_A SAM-dependent methyltra 25.1 38 0.0013 21.4 2.0 34 4-37 102-141 (219)
419 3ofk_A Nodulation protein S; N 25.1 33 0.0011 21.5 1.6 32 3-34 113-153 (216)
420 3g2m_A PCZA361.24; SAM-depende 25.0 33 0.0011 22.9 1.7 34 3-36 149-191 (299)
421 3gwz_A MMCR; methyltransferase 24.9 53 0.0018 22.9 2.8 34 4-37 268-309 (369)
422 3gvi_A Malate dehydrogenase; N 24.8 70 0.0024 22.4 3.4 36 3-38 74-127 (324)
423 1t2d_A LDH-P, L-lactate dehydr 24.8 1E+02 0.0035 21.3 4.3 13 3-15 71-83 (322)
424 3llo_A Prestin; STAS domain, c 24.7 38 0.0013 20.1 1.8 33 6-38 66-106 (143)
425 2esr_A Methyltransferase; stru 24.7 37 0.0013 20.5 1.8 36 4-39 100-142 (177)
426 4ew6_A D-galactose-1-dehydroge 24.6 99 0.0034 21.2 4.2 30 4-34 81-110 (330)
427 3iv6_A Putative Zn-dependent a 24.5 1.2E+02 0.0041 20.4 4.5 30 4-34 110-147 (261)
428 2avn_A Ubiquinone/menaquinone 24.5 39 0.0013 22.1 2.0 32 4-35 114-152 (260)
429 3dhn_A NAD-dependent epimerase 24.4 1.2E+02 0.004 18.9 4.3 35 4-38 67-114 (227)
430 2x0j_A Malate dehydrogenase; o 24.4 74 0.0025 22.0 3.4 35 3-37 68-120 (294)
431 1ooe_A Dihydropteridine reduct 24.4 54 0.0018 21.0 2.6 35 3-37 71-131 (236)
432 3pdu_A 3-hydroxyisobutyrate de 24.2 1.2E+02 0.0042 20.1 4.5 32 4-35 57-95 (287)
433 3ohs_X Trans-1,2-dihydrobenzen 24.2 83 0.0028 21.5 3.7 30 4-34 66-95 (334)
434 4e12_A Diketoreductase; oxidor 24.1 1.4E+02 0.005 19.8 4.9 28 4-31 85-117 (283)
435 1a5z_A L-lactate dehydrogenase 24.0 1.3E+02 0.0045 20.6 4.7 33 4-36 67-117 (319)
436 1xea_A Oxidoreductase, GFO/IDH 24.0 70 0.0024 21.7 3.3 30 4-34 63-92 (323)
437 1th8_B Anti-sigma F factor ant 23.9 39 0.0013 19.0 1.7 33 6-38 45-85 (116)
438 2wa2_A Non-structural protein 23.9 96 0.0033 21.0 3.9 31 4-34 148-192 (276)
439 1h6d_A Precursor form of gluco 23.8 81 0.0028 22.7 3.7 30 4-34 150-179 (433)
440 3oiz_A Antisigma-factor antago 23.8 32 0.0011 19.4 1.2 33 6-38 46-86 (99)
441 1via_A Shikimate kinase; struc 23.6 73 0.0025 19.3 3.1 26 5-30 142-169 (175)
442 3d1l_A Putative NADP oxidoredu 23.4 92 0.0032 20.3 3.7 21 4-25 68-88 (266)
443 1y6j_A L-lactate dehydrogenase 23.4 1.2E+02 0.004 21.0 4.4 33 4-36 74-124 (318)
444 3m2t_A Probable dehydrogenase; 23.3 1.1E+02 0.0037 21.3 4.2 38 4-45 68-105 (359)
445 3gjy_A Spermidine synthase; AP 23.3 73 0.0025 22.3 3.3 34 3-36 158-201 (317)
446 3e48_A Putative nucleoside-dip 23.2 79 0.0027 20.7 3.4 35 4-38 65-108 (289)
447 1yb4_A Tartronic semialdehyde 23.1 1.2E+02 0.0041 20.0 4.3 20 4-23 58-77 (295)
448 1lld_A L-lactate dehydrogenase 23.1 1.2E+02 0.0041 20.4 4.3 12 4-15 75-86 (319)
449 1u8x_X Maltose-6'-phosphate gl 23.0 2.2E+02 0.0075 21.0 6.0 12 3-14 101-112 (472)
450 3pqe_A L-LDH, L-lactate dehydr 22.9 88 0.003 21.9 3.6 34 4-37 73-124 (326)
451 1ldn_A L-lactate dehydrogenase 22.8 83 0.0028 21.7 3.5 33 4-36 74-124 (316)
452 3cky_A 2-hydroxymethyl glutara 22.8 1.3E+02 0.0046 19.8 4.5 32 4-35 60-98 (301)
453 3doj_A AT3G25530, dehydrogenas 22.7 1.5E+02 0.0052 20.0 4.8 32 4-35 77-115 (310)
454 1zh8_A Oxidoreductase; TM0312, 22.5 93 0.0032 21.4 3.7 38 4-45 82-119 (340)
455 3hhp_A Malate dehydrogenase; M 22.4 89 0.0031 21.7 3.6 35 3-37 68-120 (312)
456 3trk_A Nonstructural polyprote 22.4 28 0.00097 24.6 1.0 37 4-40 211-264 (324)
457 3h8v_A Ubiquitin-like modifier 22.2 51 0.0017 22.9 2.3 16 3-18 136-151 (292)
458 2dkn_A 3-alpha-hydroxysteroid 22.2 92 0.0031 19.7 3.4 35 3-37 61-115 (255)
459 1xdz_A Methyltransferase GIDB; 22.1 36 0.0012 22.0 1.4 32 3-34 140-173 (240)
460 4aj2_A L-lactate dehydrogenase 22.1 74 0.0025 22.4 3.1 35 4-38 87-139 (331)
461 3vku_A L-LDH, L-lactate dehydr 21.9 1.2E+02 0.004 21.3 4.1 34 4-37 76-127 (326)
462 1wzn_A SAM-dependent methyltra 21.9 43 0.0015 21.5 1.7 30 4-33 105-143 (252)
463 3bkx_A SAM-dependent methyltra 21.8 1.7E+02 0.0057 18.8 4.8 34 4-37 122-161 (275)
464 1sbo_A Putative anti-sigma fac 21.8 45 0.0015 18.5 1.6 33 6-38 46-86 (110)
465 3u81_A Catechol O-methyltransf 21.8 1.3E+02 0.0045 18.9 4.1 34 3-37 133-172 (221)
466 3o9z_A Lipopolysaccaride biosy 21.5 1.1E+02 0.0039 20.8 3.9 39 3-45 71-109 (312)
467 3moi_A Probable dehydrogenase; 21.5 98 0.0034 21.7 3.7 30 4-34 64-93 (387)
468 1fp1_D Isoliquiritigenin 2'-O- 21.5 46 0.0016 23.2 2.0 20 16-35 287-306 (372)
469 3u5t_A 3-oxoacyl-[acyl-carrier 21.5 50 0.0017 21.9 2.1 34 4-37 105-163 (267)
470 3r6d_A NAD-dependent epimerase 21.5 1.2E+02 0.004 19.0 3.8 35 4-38 73-110 (221)
471 3dqp_A Oxidoreductase YLBE; al 21.4 1E+02 0.0035 19.2 3.5 35 4-38 63-108 (219)
472 4dgf_A Sulfate transporter sul 21.4 36 0.0012 20.2 1.2 33 6-38 54-94 (135)
473 3btv_A Galactose/lactose metab 21.3 86 0.0029 22.6 3.4 32 4-35 89-125 (438)
474 2r3s_A Uncharacterized protein 21.3 48 0.0016 22.4 2.0 35 4-38 232-274 (335)
475 2pjd_A Ribosomal RNA small sub 21.3 36 0.0012 23.6 1.3 35 4-38 261-306 (343)
476 2jl1_A Triphenylmethane reduct 21.2 1.2E+02 0.0042 19.6 4.0 34 4-37 66-108 (287)
477 1bhe_A PEHA, polygalacturonase 20.9 65 0.0022 22.8 2.7 20 15-34 26-45 (376)
478 3h2s_A Putative NADH-flavin re 20.9 1.6E+02 0.0054 18.2 4.4 33 4-36 62-105 (224)
479 3fi9_A Malate dehydrogenase; s 20.8 1E+02 0.0035 21.7 3.7 35 3-37 75-128 (343)
480 1oju_A MDH, malate dehydrogena 20.8 96 0.0033 21.3 3.4 34 4-37 69-120 (294)
481 3uce_A Dehydrogenase; rossmann 20.6 60 0.0021 20.6 2.3 35 4-38 59-119 (223)
482 1y8c_A S-adenosylmethionine-de 20.5 39 0.0013 21.4 1.3 30 4-33 101-140 (246)
483 2d59_A Hypothetical protein PH 20.5 1.4E+02 0.0046 18.0 3.8 53 3-57 76-129 (144)
484 2fpo_A Methylase YHHF; structu 20.3 1E+02 0.0036 19.2 3.4 34 4-37 122-162 (202)
No 1
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=99.28 E-value=1.9e-11 Score=87.97 Aligned_cols=87 Identities=21% Similarity=0.422 Sum_probs=69.7
Q ss_pred CCcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccChHHHHhcCcEEEeEeeceeeeeechhhHHHHHHHhcC
Q 034260 2 GAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPLTPAAARYLIYGFLFFFFLVLGYSVIYFRKMLYISGQ 81 (100)
Q Consensus 2 G~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~~~~i~~l~~~ 81 (100)
|+|+|++|||+|.+.++++++++++++|+++++|....+.+++...++.|++++.| ++.+...+.+.+.+++++
T Consensus 250 g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g------~~~~~~~~~~~~~l~~~g 323 (363)
T 3m6i_A 250 GIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQF------QYRYCNTWPRAIRLVENG 323 (363)
T ss_dssp SCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSCCCCCHHHHHHHTCEEEE------CCSCSSCHHHHHHHHHTT
T ss_pred CCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCCccccHHHHHhcCcEEEE------ccCCHHHHHHHHHHHHhC
Confidence 46899999999998899999999999999999999887777888899999999995 444433344667788887
Q ss_pred CC--cceeeeeceee
Q 034260 82 TP--KLIQATLFDLF 94 (100)
Q Consensus 82 ~~--~~i~~~~~~~~ 94 (100)
.. +.+.+..++|+
T Consensus 324 ~i~~~~~i~~~~~l~ 338 (363)
T 3m6i_A 324 LVDLTRLVTHRFPLE 338 (363)
T ss_dssp SSCCGGGEEEEEEGG
T ss_pred CCChHHceeeeeeHH
Confidence 53 44445677775
No 2
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=99.25 E-value=2.8e-11 Score=86.59 Aligned_cols=87 Identities=15% Similarity=-0.006 Sum_probs=68.4
Q ss_pred CCcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccChHHHHhcCcEEEeEeeceeeeeechhhH-HHHHHHhc
Q 034260 2 GAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPLTPAAARYLIYGFLFFFFLVLGYSVIYF-RKMLYISG 80 (100)
Q Consensus 2 G~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~~-~~i~~l~~ 80 (100)
|+++|++|||+|.+.++++++++++++|+++.+|....+.++++..++.|++++.| ++.++++++ +.+.++++
T Consensus 236 g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g------~~~~~~~~~~~~~~l~~~ 309 (344)
T 2h6e_A 236 GLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLG------SNYGSLNDLEDVVRLSES 309 (344)
T ss_dssp TCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHHHTTCEEEE------CCSCCHHHHHHHHHHHHT
T ss_pred CCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCCcccCHHHHhhCCcEEEE------EecCCHHHHHHHHHHHHc
Confidence 34799999999998899999999999999999998876677888888999999995 444445555 56778888
Q ss_pred CCCcceeeeeceeee
Q 034260 81 QTPKLIQATLFDLFF 95 (100)
Q Consensus 81 ~~~~~i~~~~~~~~~ 95 (100)
+..+... +.++|+.
T Consensus 310 g~i~~~i-~~~~l~~ 323 (344)
T 2h6e_A 310 GKIKPYI-IKVPLDD 323 (344)
T ss_dssp TSSCCCE-EEECC--
T ss_pred CCCCcce-EEEeHHH
Confidence 7655444 6778764
No 3
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=99.24 E-value=5e-11 Score=85.51 Aligned_cols=87 Identities=31% Similarity=0.431 Sum_probs=68.3
Q ss_pred CCcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccChHHHHhcCcEEEeEeeceeeeeechhhHHHHHHHhcC
Q 034260 2 GAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPLTPAAARYLIYGFLFFFFLVLGYSVIYFRKMLYISGQ 81 (100)
Q Consensus 2 G~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~~~~i~~l~~~ 81 (100)
|+++|++|||+|.+.++++++++++++|+++.+|....+.++++..++.|++++.| ++.+..++.+.+.+++++
T Consensus 238 g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g------~~~~~~~~~~~~~l~~~g 311 (352)
T 1e3j_A 238 GDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKS------VFRYCNDYPIALEMVASG 311 (352)
T ss_dssp SSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEE------CCSCSSCHHHHHHHHHTT
T ss_pred CCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccccHHHHHhcCcEEEE------eccchHHHHHHHHHHHcC
Confidence 46899999999998899999999999999999998766667888889999999995 444433344667788877
Q ss_pred C--Ccceeeeeceee
Q 034260 82 T--PKLIQATLFDLF 94 (100)
Q Consensus 82 ~--~~~i~~~~~~~~ 94 (100)
. .+.+.++.+||+
T Consensus 312 ~i~~~~~i~~~~~l~ 326 (352)
T 1e3j_A 312 RCNVKQLVTHSFKLE 326 (352)
T ss_dssp SCCCGGGEEEEEEGG
T ss_pred CCChHHheeEEecHH
Confidence 5 333444677775
No 4
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=99.23 E-value=3.2e-11 Score=87.36 Aligned_cols=86 Identities=17% Similarity=0.190 Sum_probs=69.1
Q ss_pred CcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC--CcccChHHHHhcCcEEEeEeeceeeeeechhhHHHHHHHhc
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH--DMTVPLTPAAARYLIYGFLFFFFLVLGYSVIYFRKMLYISG 80 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~--~~~i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~~~~i~~l~~ 80 (100)
+|+|++|||+|.+.++++++++++++|+++++|.... +.+++...++.|++++.| ++.++.++.+.+.++++
T Consensus 252 gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g------~~~~~~~~~~~~~l~~~ 325 (370)
T 4ej6_A 252 GGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLG------SFINPFVHRRAADLVAT 325 (370)
T ss_dssp TCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHHHHHHTTCEEEE------CCSCTTCHHHHHHHHHT
T ss_pred CCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHHHHHhCCcEEEE------eccChHHHHHHHHHHHc
Confidence 3899999999988899999999999999999998765 567888999999999995 44444444566788888
Q ss_pred CCC--cceeeeeceee
Q 034260 81 QTP--KLIQATLFDLF 94 (100)
Q Consensus 81 ~~~--~~i~~~~~~~~ 94 (100)
+.. +.+.+..++|+
T Consensus 326 g~i~~~~~i~~~~~l~ 341 (370)
T 4ej6_A 326 GAIEIDRMISRRISLD 341 (370)
T ss_dssp TCSCCGGGEEEEECGG
T ss_pred CCCChhHcEEEEEEHH
Confidence 753 44455777775
No 5
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=99.22 E-value=7.5e-11 Score=84.76 Aligned_cols=87 Identities=26% Similarity=0.367 Sum_probs=68.2
Q ss_pred CcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccChHHHHhcCcEEEeEeeceeeeeechhhHHHHHHHhcCC
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPLTPAAARYLIYGFLFFFFLVLGYSVIYFRKMLYISGQT 82 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~~~~i~~l~~~~ 82 (100)
+|+|++|||+|.+.++++++++++++|+++.+|....+.++++..++.|++++.| ++.+..++.+.+.+++++.
T Consensus 241 ~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g------~~~~~~~~~~~~~l~~~g~ 314 (356)
T 1pl8_A 241 CKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKG------VFRYCNTWPVAISMLASKS 314 (356)
T ss_dssp SCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEE------CCSCSSCHHHHHHHHHTTS
T ss_pred CCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHhcceEEEE------ecccHHHHHHHHHHHHcCC
Confidence 4799999999998899999999999999999998766677888889999999995 4444333446677888775
Q ss_pred --Ccceeeeeceeee
Q 034260 83 --PKLIQATLFDLFF 95 (100)
Q Consensus 83 --~~~i~~~~~~~~~ 95 (100)
.+.+.++.++|+.
T Consensus 315 i~~~~~i~~~~~l~~ 329 (356)
T 1pl8_A 315 VNVKPLVTHRFPLEK 329 (356)
T ss_dssp CCCGGGEEEEEEGGG
T ss_pred CChHHheEEEecHHH
Confidence 3344456777753
No 6
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=99.18 E-value=5.3e-11 Score=84.84 Aligned_cols=92 Identities=11% Similarity=0.069 Sum_probs=67.1
Q ss_pred CCcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcc---cChHHHHhcCcEEEeEeeceeeeeechhhH-HHHHH
Q 034260 2 GAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMT---VPLTPAAARYLIYGFLFFFFLVLGYSVIYF-RKMLY 77 (100)
Q Consensus 2 G~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~---i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~~-~~i~~ 77 (100)
++|+|+++||+|.+.++++++++++++|+++++|....+.. .+...++.|++++.|++..... .+..+++ +.+++
T Consensus 227 ~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~-~~~~~~~~~~~~l 305 (346)
T 4a2c_A 227 LRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSS-PWPGQEWETASRL 305 (346)
T ss_dssp GCSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCS-STTCHHHHHHHHH
T ss_pred cCCcccccccccccchhhhhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccC-cchHHHHHHHHHH
Confidence 35799999999999999999999999999999999876543 3556788999999986542111 1223444 55677
Q ss_pred HhcCC--Ccceeeeeceee
Q 034260 78 ISGQT--PKLIQATLFDLF 94 (100)
Q Consensus 78 l~~~~--~~~i~~~~~~~~ 94 (100)
++++. .+.+.+++++|+
T Consensus 306 ~~~g~l~~~~lI~~~~~l~ 324 (346)
T 4a2c_A 306 LTERKLSLEPLIAHRGSFE 324 (346)
T ss_dssp HHTTCSCCGGGEEEEECHH
T ss_pred HHcCCCCCCccEeEEEeHH
Confidence 87774 344444667765
No 7
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=99.18 E-value=6.1e-11 Score=84.55 Aligned_cols=86 Identities=14% Similarity=0.117 Sum_probs=72.2
Q ss_pred CCcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccChHHHHhcCcEEEeEeeceeeeeechhhH-HHHHHHhc
Q 034260 2 GAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPLTPAAARYLIYGFLFFFFLVLGYSVIYF-RKMLYISG 80 (100)
Q Consensus 2 G~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~~-~~i~~l~~ 80 (100)
|.|+|+++||+|.+.++++++++++++|+++++|.+....+++...++.|++++.| ++.+++.++ +.++++++
T Consensus 230 g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g------s~~~~~~~~~~~~~l~~~ 303 (348)
T 4eez_A 230 GLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAG------SLVGTRLDLAEAFQFGAE 303 (348)
T ss_dssp SSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSCEEEECHHHHHHSCCEEEE------CCSCCHHHHHHHHHHHHT
T ss_pred CCCceEEEEeccCcchhheeheeecCCceEEEEeccCCCCccCHHHHHhCCeEEEE------EecCCHHHHHHHHHHHHc
Confidence 45899999999999999999999999999999999888788899999999999995 544555555 66778888
Q ss_pred CCCcceeeeeceee
Q 034260 81 QTPKLIQATLFDLF 94 (100)
Q Consensus 81 ~~~~~i~~~~~~~~ 94 (100)
+..+.+. +.++|+
T Consensus 304 g~i~p~~-~~~~l~ 316 (348)
T 4eez_A 304 GKVKPIV-ATRKLE 316 (348)
T ss_dssp TSCCCCE-EEECGG
T ss_pred CCCEEEE-EEEeHH
Confidence 8877776 456765
No 8
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=99.17 E-value=5.8e-11 Score=84.89 Aligned_cols=88 Identities=14% Similarity=0.135 Sum_probs=68.8
Q ss_pred CCcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccCh-HHHHhcCcEEEeEeeceeeeee-chhhH-HHHHHH
Q 034260 2 GAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPL-TPAAARYLIYGFLFFFFLVLGY-SVIYF-RKMLYI 78 (100)
Q Consensus 2 G~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~-~~l~~k~~~i~Gs~~~~g~~~~-~~~~~-~~i~~l 78 (100)
|+|+|++|||+|.+.++++++++++++|+++.+|....+.++++ ..++.|++++.| ++.+ .++++ +.+.++
T Consensus 229 ~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g------~~~~~~~~~~~~~~~l~ 302 (343)
T 2dq4_A 229 GSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFG------IAGRRLWQTWMQGTALV 302 (343)
T ss_dssp SSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCEEECHHHHTGGGTCEEEE------CCSCCTTHHHHHHHHHH
T ss_pred CCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCceeCcHHHHHhCceEEEE------eecCCCHHHHHHHHHHH
Confidence 45899999999998899999999999999999998766677888 788899999996 3322 33444 667788
Q ss_pred hcCC--Ccceeeeeceeee
Q 034260 79 SGQT--PKLIQATLFDLFF 95 (100)
Q Consensus 79 ~~~~--~~~i~~~~~~~~~ 95 (100)
+++. .+.+.++.++|+.
T Consensus 303 ~~g~~~~~~~i~~~~~l~~ 321 (343)
T 2dq4_A 303 YSGRVDLSPLLTHRLPLSR 321 (343)
T ss_dssp HHTSSCCGGGEEEEEEGGG
T ss_pred HcCCCChHHheeEEecHHH
Confidence 8775 4455456777753
No 9
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=99.15 E-value=5.5e-11 Score=84.99 Aligned_cols=85 Identities=14% Similarity=0.083 Sum_probs=68.9
Q ss_pred CCcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC-CcccChHHHHhcCcEEEeEeeceeeeeechhhH-HHHHHHh
Q 034260 2 GAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH-DMTVPLTPAAARYLIYGFLFFFFLVLGYSVIYF-RKMLYIS 79 (100)
Q Consensus 2 G~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~-~~~i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~~-~~i~~l~ 79 (100)
|+|+|++|||+|.+.++++++++++++|+++++|.... +.+++. .++.|++++.| +..++++++ +.+.+++
T Consensus 237 g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~-~~~~~~~~i~g------~~~~~~~~~~~~~~l~~ 309 (345)
T 3jv7_A 237 GQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGF-FMIPFGASVVT------PYWGTRSELMEVVALAR 309 (345)
T ss_dssp GGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCCEEEST-TTSCTTCEEEC------CCSCCHHHHHHHHHHHH
T ss_pred CCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCcCH-HHHhCCCEEEE------EecCCHHHHHHHHHHHH
Confidence 35899999999998899999999999999999998876 667775 77899999995 444445555 6677888
Q ss_pred cCCCcceeeeeceee
Q 034260 80 GQTPKLIQATLFDLF 94 (100)
Q Consensus 80 ~~~~~~i~~~~~~~~ 94 (100)
++..+.+. +.++|+
T Consensus 310 ~g~l~~~~-~~~~l~ 323 (345)
T 3jv7_A 310 AGRLDIHT-ETFTLD 323 (345)
T ss_dssp TTCCCCCE-EEECST
T ss_pred cCCCceEE-EEEcHH
Confidence 88877766 577765
No 10
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=99.15 E-value=5.7e-11 Score=85.43 Aligned_cols=86 Identities=12% Similarity=0.045 Sum_probs=67.9
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCC-CCcccChHHH----HhcCcEEEeEeeceeeeeechhhH-HHHHH
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGH-HDMTVPLTPA----AARYLIYGFLFFFFLVLGYSVIYF-RKMLY 77 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~-~~~~i~~~~l----~~k~~~i~Gs~~~~g~~~~~~~~~-~~i~~ 77 (100)
|+|++|||+|.+.++++++++++++|+++.+|... .+.++++..+ +.|++++.| ++.++++++ +.+.+
T Consensus 242 g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~i~g------~~~~~~~~~~~~~~l 315 (357)
T 2b5w_A 242 QMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVG------SVNSHVEHFEAATVT 315 (357)
T ss_dssp CEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHTTCEEEE------CCCCCHHHHHHHHHH
T ss_pred CCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCCCceecHHHHhHHHHhCCeEEEE------eccCCHHHHHHHHHH
Confidence 79999999999889999999999999999999887 5667888878 899999995 444444555 66778
Q ss_pred HhcC--C-Ccceeeeeceeee
Q 034260 78 ISGQ--T-PKLIQATLFDLFF 95 (100)
Q Consensus 78 l~~~--~-~~~i~~~~~~~~~ 95 (100)
++++ . .+.+.++.++|+-
T Consensus 316 ~~~g~~~~~~~~i~~~~~l~~ 336 (357)
T 2b5w_A 316 FTKLPKWFLEDLVTGVHPLSE 336 (357)
T ss_dssp HHHSCHHHHHHHEEEEEEGGG
T ss_pred HHhCchhhhhhhcceeecHHH
Confidence 8887 5 3444456777753
No 11
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=99.13 E-value=3.4e-11 Score=87.38 Aligned_cols=88 Identities=13% Similarity=0.124 Sum_probs=67.8
Q ss_pred CCcccEEEEccChHHHHHHHHHhccCCCEEEEecCCC-C-CcccChHH-HHhcCcEEEeEeeceeeeeechhhH-HHHHH
Q 034260 2 GAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGH-H-DMTVPLTP-AAARYLIYGFLFFFFLVLGYSVIYF-RKMLY 77 (100)
Q Consensus 2 G~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~-~-~~~i~~~~-l~~k~~~i~Gs~~~~g~~~~~~~~~-~~i~~ 77 (100)
|+|+|++|||+|.+.++++++++++++|+++.+|... . +.++++.. ++.|++++.| ++.+.++++ +.+.+
T Consensus 265 g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g------~~~~~~~~~~~~~~l 338 (380)
T 1vj0_A 265 GRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKG------IWVSDTSHFVKTVSI 338 (380)
T ss_dssp TSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEE------CCCCCHHHHHHHHHH
T ss_pred CCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCeeEchHHHHHhCCeEEEE------eecCCHHHHHHHHHH
Confidence 3479999999998889999999999999999999876 5 66788887 8899999996 433344555 55677
Q ss_pred Hhc--CCCcceeeeeceeee
Q 034260 78 ISG--QTPKLIQATLFDLFF 95 (100)
Q Consensus 78 l~~--~~~~~i~~~~~~~~~ 95 (100)
+++ +..+.+.+..++|+-
T Consensus 339 ~~~~~g~l~~~i~~~~~l~~ 358 (380)
T 1vj0_A 339 TSRNYQLLSKLITHRLPLKE 358 (380)
T ss_dssp HHTCHHHHGGGCCEEEEGGG
T ss_pred HHhhcCCeeeEEEEEEeHHH
Confidence 877 643444446777753
No 12
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=99.13 E-value=1.4e-10 Score=83.06 Aligned_cols=87 Identities=17% Similarity=0.206 Sum_probs=67.5
Q ss_pred CCcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccCh-HHHHhcCcEEEeEeeceeeeeec-hhhH-HHHHHH
Q 034260 2 GAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPL-TPAAARYLIYGFLFFFFLVLGYS-VIYF-RKMLYI 78 (100)
Q Consensus 2 G~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~-~~l~~k~~~i~Gs~~~~g~~~~~-~~~~-~~i~~l 78 (100)
|+++|++|||+|.+.++++++++++++|+++.+|....+.++++ ..++.|++++.|+ +... ++++ +.+.++
T Consensus 234 g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~------~~~~~~~~~~~~~~l~ 307 (348)
T 2d8a_A 234 GNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGI------TGRHLWETWYTVSRLL 307 (348)
T ss_dssp TSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHTTTTTCEEEEC------CCCCSHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCcccCchHHHHhCCcEEEEe------cCCCcHHHHHHHHHHH
Confidence 35799999999998899999999999999999998876677888 7888999999963 3322 4444 667788
Q ss_pred hcCC--Ccceeeeece-ee
Q 034260 79 SGQT--PKLIQATLFD-LF 94 (100)
Q Consensus 79 ~~~~--~~~i~~~~~~-~~ 94 (100)
+++. .+.+.++.+| |+
T Consensus 308 ~~g~i~~~~~i~~~~~gl~ 326 (348)
T 2d8a_A 308 QSGKLNLDPIITHKYKGFD 326 (348)
T ss_dssp HHTCCCCTTTEEEEEESST
T ss_pred HcCCCChHHhheeeCCCHH
Confidence 7775 3444446777 64
No 13
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=99.12 E-value=1.8e-10 Score=83.24 Aligned_cols=88 Identities=24% Similarity=0.278 Sum_probs=65.0
Q ss_pred cccEEEEccChHHHHHHHHHhccCC-CEEEEecCCCCCcccChHHHHhcCcEEEeEeeceeeeeechhhH-HHHHHHhcC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAG-DKVCLVGMGHHDMTVPLTPAAARYLIYGFLFFFFLVLGYSVIYF-RKMLYISGQ 81 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~g-Grvv~vG~~~~~~~i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~~-~~i~~l~~~ 81 (100)
|+|++|||+|.+.++++++++++++ |+++++|....+.++++..++.++ ++.|+++ +.+. ..+++ +.+.+++++
T Consensus 265 g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~-~i~g~~~--~~~~-~~~~~~~~~~l~~~g 340 (376)
T 1e3i_A 265 GVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILGR-SINGTFF--GGWK-SVDSVPNLVSDYKNK 340 (376)
T ss_dssp CBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHTTC-EEEECSG--GGCC-HHHHHHHHHHHHHTT
T ss_pred CccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCCCccccCHHHhhccC-eEEEEec--CCCC-cHHHHHHHHHHHHcC
Confidence 7999999999988999999999999 999999996556677888888888 9996432 1111 23444 556788777
Q ss_pred CCc--ceeeeeceeee
Q 034260 82 TPK--LIQATLFDLFF 95 (100)
Q Consensus 82 ~~~--~i~~~~~~~~~ 95 (100)
..+ .+.++.++|+.
T Consensus 341 ~i~~~~~i~~~~~l~~ 356 (376)
T 1e3i_A 341 KFDLDLLVTHALPFES 356 (376)
T ss_dssp SSCGGGGEEEEEEGGG
T ss_pred CCCcHHhEeeeecHHH
Confidence 532 34446777753
No 14
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=99.11 E-value=3.4e-10 Score=82.70 Aligned_cols=87 Identities=13% Similarity=0.095 Sum_probs=67.7
Q ss_pred CCcccEEEEccChH-HHHHHHHHhc----cCCCEEEEecCCCCCcccChHHHHhcCcEEEeEeeceeeeeec-hhhH-HH
Q 034260 2 GAGIDVSFDCAGLN-KTMSTVLDAT----RAGDKVCLVGMGHHDMTVPLTPAAARYLIYGFLFFFFLVLGYS-VIYF-RK 74 (100)
Q Consensus 2 G~G~D~vie~~G~~-~~~~~al~~l----~~gGrvv~vG~~~~~~~i~~~~l~~k~~~i~Gs~~~~g~~~~~-~~~~-~~ 74 (100)
|+|+|++|||+|.+ .+++.+++++ +++|+++++|....+.+++...++.|++++.| ++.+. +.++ +.
T Consensus 280 g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g------~~~~~~~~~~~~~ 353 (404)
T 3ip1_A 280 GLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQIVG------SQGHSGHGTFPRV 353 (404)
T ss_dssp TCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCSCEEECHHHHHHTTCEEEE------CCCCCSTTHHHHH
T ss_pred CCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCCCCcccHHHHhccceEEEE------ecCCCchHHHHHH
Confidence 45899999999997 4778888888 99999999999887788999999999999996 43322 3444 66
Q ss_pred HHHHhcC-CCcceeeeeceee
Q 034260 75 MLYISGQ-TPKLIQATLFDLF 94 (100)
Q Consensus 75 i~~l~~~-~~~~i~~~~~~~~ 94 (100)
+.+++++ .++.+.+..++|+
T Consensus 354 ~~ll~~gl~~~~~i~~~~~l~ 374 (404)
T 3ip1_A 354 ISLMASGMDMTKIISKTVSME 374 (404)
T ss_dssp HHHHHTTCCGGGGCCEEECGG
T ss_pred HHHHHcCCChhheEEEEeeHH
Confidence 7888888 3334455777775
No 15
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=99.09 E-value=8.8e-11 Score=84.69 Aligned_cols=87 Identities=11% Similarity=0.113 Sum_probs=68.2
Q ss_pred CCcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC-CcccChHHHHhcCcEEEeEeeceeeeeechhhH-HHHHHHh
Q 034260 2 GAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH-DMTVPLTPAAARYLIYGFLFFFFLVLGYSVIYF-RKMLYIS 79 (100)
Q Consensus 2 G~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~-~~~i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~~-~~i~~l~ 79 (100)
|+|+|++|||+| ..++++++++++++|+++++|.... +.+++...++.|++++.| +..++++++ +.+.+++
T Consensus 255 g~g~D~vid~~g-~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g------~~~~~~~~~~~~~~l~~ 327 (363)
T 3uog_A 255 DRGADHILEIAG-GAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQG------ISVGHRRALEDLVGAVD 327 (363)
T ss_dssp TCCEEEEEEETT-SSCHHHHHHHEEEEEEEEEECCCSSCEECCBTTHHHHTCCEEEE------CCCCCHHHHHHHHHHHH
T ss_pred CCCceEEEECCC-hHHHHHHHHHhhcCCEEEEEecCCCcccCcCHHHHHhCCcEEEE------EecCCHHHHHHHHHHHH
Confidence 358999999999 4689999999999999999998875 367888889999999995 444445555 5567777
Q ss_pred cCCCcceeeeeceeee
Q 034260 80 GQTPKLIQATLFDLFF 95 (100)
Q Consensus 80 ~~~~~~i~~~~~~~~~ 95 (100)
++..+.+.+.+++|+.
T Consensus 328 ~g~l~~~i~~~~~l~~ 343 (363)
T 3uog_A 328 RLGLKPVIDMRYKFTE 343 (363)
T ss_dssp HHTCCCCEEEEEEGGG
T ss_pred cCCCccceeeEEcHHH
Confidence 7765555557788753
No 16
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=99.09 E-value=2.5e-10 Score=81.40 Aligned_cols=84 Identities=14% Similarity=0.094 Sum_probs=69.4
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccChHHHHhcCcEEEeEeeceeeeeechhhH-HHHHHHhcCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPLTPAAARYLIYGFLFFFFLVLGYSVIYF-RKMLYISGQT 82 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~~-~~i~~l~~~~ 82 (100)
++|+++||+|.+.++++++++++++|+++.+|....+.+++...++.|++++.| ++.++++++ +.+.+++++.
T Consensus 232 ~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g------~~~~~~~~~~~~~~l~~~g~ 305 (340)
T 3s2e_A 232 GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRG------SIVGTRSDLQESLDFAAHGD 305 (340)
T ss_dssp SEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSSEEEEEHHHHHHTTCEEEE------CCSCCHHHHHHHHHHHHTTS
T ss_pred CCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCCCCCCCHHHHHhCCeEEEE------EecCCHHHHHHHHHHHHhCC
Confidence 799999999999999999999999999999999887777888889999999995 444555555 6677888887
Q ss_pred Ccceeeeeceee
Q 034260 83 PKLIQATLFDLF 94 (100)
Q Consensus 83 ~~~i~~~~~~~~ 94 (100)
.+.+.+ .++|+
T Consensus 306 l~~~~~-~~~l~ 316 (340)
T 3s2e_A 306 VKATVS-TAKLD 316 (340)
T ss_dssp CCCCEE-EECGG
T ss_pred CCceEE-EEeHH
Confidence 666654 45765
No 17
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=99.08 E-value=2.3e-10 Score=82.53 Aligned_cols=87 Identities=9% Similarity=0.022 Sum_probs=65.4
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC--CcccChHHHHhcCcEEEeEeeceeeeeechhhH-HHHHHHhc
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH--DMTVPLTPAAARYLIYGFLFFFFLVLGYSVIYF-RKMLYISG 80 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~--~~~i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~~-~~i~~l~~ 80 (100)
|+|++|||+|.+.++++++++++++|+++++|.... +.++++..++.|++++.|+++ +... .++++ +.+.++++
T Consensus 258 g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~--~~~~-~~~~~~~~~~l~~~ 334 (371)
T 1f8f_A 258 GVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVE--GSGS-PKKFIPELVRLYQQ 334 (371)
T ss_dssp CEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSG--GGSC-HHHHHHHHHHHHHT
T ss_pred CCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCCCccccCHHHHHhCCCEEEEeCC--CCCc-hHHHHHHHHHHHHc
Confidence 799999999998899999999999999999998763 457888888899999997442 1111 13444 55678887
Q ss_pred CCCc---ceeeeeceeee
Q 034260 81 QTPK---LIQATLFDLFF 95 (100)
Q Consensus 81 ~~~~---~i~~~~~~~~~ 95 (100)
+..+ +|+ . ++|+.
T Consensus 335 g~l~~~~~i~-~-~~l~~ 350 (371)
T 1f8f_A 335 GKFPFDQLVK-F-YAFDE 350 (371)
T ss_dssp TSCCGGGGEE-E-EEGGG
T ss_pred CCCCccccee-E-ecHHH
Confidence 7533 455 4 77753
No 18
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=99.08 E-value=2.6e-10 Score=81.44 Aligned_cols=85 Identities=14% Similarity=0.135 Sum_probs=68.3
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccChHHHHhcCcEEEeEeeceeeeeechhhH-HHHHHHhcCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPLTPAAARYLIYGFLFFFFLVLGYSVIYF-RKMLYISGQT 82 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~~-~~i~~l~~~~ 82 (100)
++|++|||+|.+.++++++++++++|+++.+|....+.++++..++.|++++.| +..++++++ +.+.+++++.
T Consensus 230 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g------~~~~~~~~~~~~~~l~~~g~ 303 (339)
T 1rjw_A 230 GVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIG------SIVGTRKDLQEALQFAAEGK 303 (339)
T ss_dssp SEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEE------CCSCCHHHHHHHHHHHHTTS
T ss_pred CCCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCCccCHHHHHhCCcEEEE------eccCCHHHHHHHHHHHHcCC
Confidence 799999999998899999999999999999998876677888888899999995 444444545 6677888876
Q ss_pred Ccceeeeeceeee
Q 034260 83 PKLIQATLFDLFF 95 (100)
Q Consensus 83 ~~~i~~~~~~~~~ 95 (100)
.+.+. +.++|+.
T Consensus 304 l~~~~-~~~~l~~ 315 (339)
T 1rjw_A 304 VKTII-EVQPLEK 315 (339)
T ss_dssp CCCCE-EEEEGGG
T ss_pred CCccE-EEEcHHH
Confidence 66554 4677753
No 19
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=99.07 E-value=3.4e-10 Score=83.92 Aligned_cols=87 Identities=13% Similarity=-0.012 Sum_probs=69.3
Q ss_pred CCcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC-CcccChHHHHhcCcEEEeEeeceeeeeechh-hHHHHHHHh
Q 034260 2 GAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH-DMTVPLTPAAARYLIYGFLFFFFLVLGYSVI-YFRKMLYIS 79 (100)
Q Consensus 2 G~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~-~~~i~~~~l~~k~~~i~Gs~~~~g~~~~~~~-~~~~i~~l~ 79 (100)
|+|+|++|||+|. .++++++++++++|+++++|.... +.+++...++.+++++.| ++.++.. ..+.+.+++
T Consensus 312 g~g~Dvvid~~G~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g------~~~~~~~~~~~~~~l~~ 384 (456)
T 3krt_A 312 GEDIDIVFEHPGR-ETFGASVFVTRKGGTITTCASTSGYMHEYDNRYLWMSLKRIIG------SHFANYREAWEANRLIA 384 (456)
T ss_dssp SCCEEEEEECSCH-HHHHHHHHHEEEEEEEEESCCTTCSEEEEEHHHHHHTTCEEEE------CCSCCHHHHHHHHHHHH
T ss_pred CCCCcEEEEcCCc-hhHHHHHHHhhCCcEEEEEecCCCcccccCHHHHHhcCeEEEE------eccCCHHHHHHHHHHHH
Confidence 4689999999998 799999999999999999998765 456788889999999995 4444334 446778888
Q ss_pred cCCCcceeeeeceeee
Q 034260 80 GQTPKLIQATLFDLFF 95 (100)
Q Consensus 80 ~~~~~~i~~~~~~~~~ 95 (100)
++..+.+.+..++|+-
T Consensus 385 ~g~l~~~i~~~~~l~~ 400 (456)
T 3krt_A 385 KGRIHPTLSKVYSLED 400 (456)
T ss_dssp TTSSCCCEEEEEEGGG
T ss_pred cCCcccceeEEEcHHH
Confidence 8876656667788753
No 20
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=99.05 E-value=7.8e-10 Score=79.72 Aligned_cols=88 Identities=19% Similarity=0.201 Sum_probs=64.3
Q ss_pred CcccEEEEccChHHHHHHHHHhccCC-CEEEEecCCCC--CcccChHHHHhcCcEEEeEeeceeeeeechhhH-HHHHHH
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAG-DKVCLVGMGHH--DMTVPLTPAAARYLIYGFLFFFFLVLGYSVIYF-RKMLYI 78 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~g-Grvv~vG~~~~--~~~i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~~-~~i~~l 78 (100)
+++|++|||+|.+.++++++++++++ |+++++|.... +.++++..++.++ ++.|+++ +.+. .++++ +.+.++
T Consensus 259 ~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~--~~~~-~~~~~~~~~~l~ 334 (373)
T 2fzw_A 259 GGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGR-TWKGTAF--GGWK-SVESVPKLVSEY 334 (373)
T ss_dssp SCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSG--GGCC-HHHHHHHHHHHH
T ss_pred CCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCCceeeeCHHHHhcCC-EEEEecc--CCCC-cHHHHHHHHHHH
Confidence 37999999999988999999999999 99999998764 4567777788888 9996432 2111 13444 556788
Q ss_pred hcCCCc--ceeeeeceee
Q 034260 79 SGQTPK--LIQATLFDLF 94 (100)
Q Consensus 79 ~~~~~~--~i~~~~~~~~ 94 (100)
+++..+ .+.++.++|+
T Consensus 335 ~~g~l~~~~~i~~~~~l~ 352 (373)
T 2fzw_A 335 MSKKIKVDEFVTHNLSFD 352 (373)
T ss_dssp HTTSSCSGGGEEEEEEGG
T ss_pred HcCCCCchheEeEEeeHH
Confidence 777532 3334677775
No 21
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=99.05 E-value=7.8e-10 Score=80.02 Aligned_cols=89 Identities=16% Similarity=0.150 Sum_probs=64.0
Q ss_pred CcccEEEEccChHHHHHHHHHhccCC-CEEEEecCCCC--CcccChHHHHhcCcEEEeEeeceeeeeechhhH-HHHHHH
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAG-DKVCLVGMGHH--DMTVPLTPAAARYLIYGFLFFFFLVLGYSVIYF-RKMLYI 78 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~g-Grvv~vG~~~~--~~~i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~~-~~i~~l 78 (100)
+|+|++|||+|.+.++++++++++++ |+++++|.... ..+++...++. ++++.|+++ +.+. .++++ +.+.++
T Consensus 262 gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~--~~~~-~~~~~~~~~~l~ 337 (378)
T 3uko_A 262 GGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAF--GGFK-SRTQVPWLVEKY 337 (378)
T ss_dssp SCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHT-TCEEEECSG--GGCC-HHHHHHHHHHHH
T ss_pred CCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHhc-CcEEEEEEe--cCCC-chHHHHHHHHHH
Confidence 38999999999999999999999996 99999998764 34566666654 899997543 2222 23444 556788
Q ss_pred hcCC--Ccceeeeeceeee
Q 034260 79 SGQT--PKLIQATLFDLFF 95 (100)
Q Consensus 79 ~~~~--~~~i~~~~~~~~~ 95 (100)
+++. ++.+.+++++|+.
T Consensus 338 ~~g~l~~~~~i~~~~~l~~ 356 (378)
T 3uko_A 338 MNKEIKVDEYITHNLTLGE 356 (378)
T ss_dssp HTTSSCCGGGEEEEEEGGG
T ss_pred HcCCCChhHheeeEeeHHH
Confidence 8774 3334456777753
No 22
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=99.05 E-value=8e-10 Score=79.77 Aligned_cols=88 Identities=18% Similarity=0.142 Sum_probs=64.6
Q ss_pred cccEEEEccChHHHHHHHHHhccCC-CEEEEecCCCC-CcccChHHHHhcCcEEEeEeeceeeeeechhhH-HHHHHHhc
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAG-DKVCLVGMGHH-DMTVPLTPAAARYLIYGFLFFFFLVLGYSVIYF-RKMLYISG 80 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~g-Grvv~vG~~~~-~~~i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~~-~~i~~l~~ 80 (100)
++|++|||+|.+.++++++++++++ |+++++|.... +.++++..++.++ ++.|+++ +.+. .++++ +.+.++++
T Consensus 262 g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~-~i~g~~~--~~~~-~~~~~~~~~~l~~~ 337 (374)
T 1cdo_A 262 GVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGR-TWKGSMF--GGFK-GKDGVPKMVKAYLD 337 (374)
T ss_dssp CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTC-EEEECSG--GGCC-HHHHHHHHHHHHHT
T ss_pred CCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCCCcccCHHHHhcCC-eEEEEec--CCCC-cHHHHHHHHHHHHc
Confidence 7999999999988999999999999 99999998764 5667877888888 9996432 1111 23444 55677877
Q ss_pred CCCc--ceeeeeceeee
Q 034260 81 QTPK--LIQATLFDLFF 95 (100)
Q Consensus 81 ~~~~--~i~~~~~~~~~ 95 (100)
+..+ .+.++.++|+.
T Consensus 338 g~l~~~~~i~~~~~l~~ 354 (374)
T 1cdo_A 338 KKVKLDEFITHRMPLES 354 (374)
T ss_dssp TSSCCGGGEEEEEEGGG
T ss_pred CCCChHHheeeEecHHH
Confidence 7532 33446777753
No 23
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=99.04 E-value=9e-10 Score=79.50 Aligned_cols=87 Identities=15% Similarity=0.150 Sum_probs=64.0
Q ss_pred cccEEEEccChHHHHHHHHHhccCC-CEEEEecCCCC--CcccChHHHHhcCcEEEeEeeceeeeeechhhH-HHHHHHh
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAG-DKVCLVGMGHH--DMTVPLTPAAARYLIYGFLFFFFLVLGYSVIYF-RKMLYIS 79 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~g-Grvv~vG~~~~--~~~i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~~-~~i~~l~ 79 (100)
++|++|||+|.+.++++++++++++ |+++++|.... +.++++..++.++ ++.|+++ +.+. .++++ +.+.+++
T Consensus 261 g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~--~~~~-~~~~~~~~~~l~~ 336 (374)
T 2jhf_A 261 GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGR-TWKGAIF--GGFK-SKDSVPKLVADFM 336 (374)
T ss_dssp CBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSG--GGCC-HHHHHHHHHHHHH
T ss_pred CCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCccccCHHHHhcCC-eEEEecc--CCCC-hHHHHHHHHHHHH
Confidence 7999999999988999999999999 99999998764 4567777888888 9996442 1111 13444 5567887
Q ss_pred cCCC--cceeeeeceee
Q 034260 80 GQTP--KLIQATLFDLF 94 (100)
Q Consensus 80 ~~~~--~~i~~~~~~~~ 94 (100)
++.. +.+.++.++|+
T Consensus 337 ~g~i~~~~~i~~~~~l~ 353 (374)
T 2jhf_A 337 AKKFALDPLITHVLPFE 353 (374)
T ss_dssp TTSSCCGGGEEEEEEGG
T ss_pred cCCCCchhheEEEEeHH
Confidence 7753 23344677775
No 24
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=99.04 E-value=3e-10 Score=81.32 Aligned_cols=86 Identities=17% Similarity=0.045 Sum_probs=68.2
Q ss_pred CcccEEEEccChHHHHHHHHHhccCCCEEEEecCCC-CCcccChHHHHhcCcEEEeEeeceeeeeechhhH-HHHHHHhc
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGH-HDMTVPLTPAAARYLIYGFLFFFFLVLGYSVIYF-RKMLYISG 80 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~-~~~~i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~~-~~i~~l~~ 80 (100)
+++|++|||+|.+.++++++++++++|+++.+|... .+ ++++..++.|++++.| +..++++++ +.+.++++
T Consensus 239 ~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~i~g------~~~~~~~~~~~~~~l~~~ 311 (347)
T 1jvb_A 239 KGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADL-HYHAPLITLSEIQFVG------SLVGNQSDFLGIMRLAEA 311 (347)
T ss_dssp SCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCC-CCCHHHHHHHTCEEEE------CCSCCHHHHHHHHHHHHT
T ss_pred CCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCC-CCCHHHHHhCceEEEE------EeccCHHHHHHHHHHHHc
Confidence 379999999999889999999999999999999876 55 7888888899999995 444445555 55678888
Q ss_pred CCCcceeeeeceeee
Q 034260 81 QTPKLIQATLFDLFF 95 (100)
Q Consensus 81 ~~~~~i~~~~~~~~~ 95 (100)
+..+.+.++.++|+.
T Consensus 312 g~l~~~i~~~~~l~~ 326 (347)
T 1jvb_A 312 GKVKPMITKTMKLEE 326 (347)
T ss_dssp TSSCCCCEEEEEGGG
T ss_pred CCCCceEEEEEcHHH
Confidence 765555556777753
No 25
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=99.03 E-value=1.3e-09 Score=80.47 Aligned_cols=87 Identities=14% Similarity=0.006 Sum_probs=68.9
Q ss_pred CCcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC-CcccChHHHHhcCcEEEeEeeceeeeeechh-hHHHHHHHh
Q 034260 2 GAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH-DMTVPLTPAAARYLIYGFLFFFFLVLGYSVI-YFRKMLYIS 79 (100)
Q Consensus 2 G~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~-~~~i~~~~l~~k~~~i~Gs~~~~g~~~~~~~-~~~~i~~l~ 79 (100)
|+|+|++|||+|. .++++++++++++|+++.+|.... ..+++...++.+++++.| ++.++.. ..+.+.+++
T Consensus 304 g~g~Dvvid~~G~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g------~~~~~~~~~~~~~~l~~ 376 (447)
T 4a0s_A 304 GREPDIVFEHTGR-VTFGLSVIVARRGGTVVTCGSSSGYLHTFDNRYLWMKLKKIVG------SHGANHEEQQATNRLFE 376 (447)
T ss_dssp SSCCSEEEECSCH-HHHHHHHHHSCTTCEEEESCCTTCSEEEEEHHHHHHTTCEEEE------CCSCCHHHHHHHHHHHH
T ss_pred CCCceEEEECCCc-hHHHHHHHHHhcCCEEEEEecCCCcccccCHHHHHhCCCEEEe------cCCCCHHHHHHHHHHHH
Confidence 4689999999998 589999999999999999998765 456788888999999995 4444444 346678888
Q ss_pred cCCCcceeeeeceeee
Q 034260 80 GQTPKLIQATLFDLFF 95 (100)
Q Consensus 80 ~~~~~~i~~~~~~~~~ 95 (100)
++..+.+.+.+++|+.
T Consensus 377 ~g~l~~~i~~~~~l~~ 392 (447)
T 4a0s_A 377 SGAVVPAMSAVYPLAE 392 (447)
T ss_dssp TTSSCCCEEEEEEGGG
T ss_pred cCCcccceeEEEcHHH
Confidence 8876666667788753
No 26
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=99.02 E-value=1.3e-09 Score=78.57 Aligned_cols=87 Identities=17% Similarity=0.159 Sum_probs=64.3
Q ss_pred cccEEEEccChHHHHHHHHHhccCC-CEEEEecCCCC--CcccChHHHHhcCcEEEeEeeceeeeeechhhH-HHHHHHh
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAG-DKVCLVGMGHH--DMTVPLTPAAARYLIYGFLFFFFLVLGYSVIYF-RKMLYIS 79 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~g-Grvv~vG~~~~--~~~i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~~-~~i~~l~ 79 (100)
|+|++|||+|.+.++++++++++++ |+++.+|.... +.++++..++.++ ++.|+++ +. +.++++ +.+.+++
T Consensus 261 g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~--~~--~~~~~~~~~~~l~~ 335 (373)
T 1p0f_A 261 GVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGR-SLKGSVF--GG--FKGEEVSRLVDDYM 335 (373)
T ss_dssp CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTC-EEEECSG--GG--CCGGGHHHHHHHHH
T ss_pred CCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCCCccccCHHHhccCc-eEEeecc--CC--cCHHHHHHHHHHHH
Confidence 7999999999988999999999999 99999998764 4567777787888 9996432 11 223444 6677888
Q ss_pred cCCCc--ceeeeeceeee
Q 034260 80 GQTPK--LIQATLFDLFF 95 (100)
Q Consensus 80 ~~~~~--~i~~~~~~~~~ 95 (100)
++..+ .+.++.++|+-
T Consensus 336 ~g~i~~~~~i~~~~~l~~ 353 (373)
T 1p0f_A 336 KKKINVNFLVSTKLTLDQ 353 (373)
T ss_dssp TTSSCGGGGEEEEECGGG
T ss_pred cCCCCchheEEEEeeHHH
Confidence 77532 33346777753
No 27
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=99.00 E-value=2.5e-10 Score=81.75 Aligned_cols=84 Identities=8% Similarity=-0.123 Sum_probs=67.4
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCC-CCcc-cChHHHH-hcCcEEEeEeeceeeeeechhhH-HHHHHHh
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGH-HDMT-VPLTPAA-ARYLIYGFLFFFFLVLGYSVIYF-RKMLYIS 79 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~-~~~~-i~~~~l~-~k~~~i~Gs~~~~g~~~~~~~~~-~~i~~l~ 79 (100)
++|++|||+|.+.++++++++++++|+++.+|... .+.+ ++...++ .|++++.| ++.++.+++ +.+.+++
T Consensus 234 ~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g------~~~~~~~~~~~~~~l~~ 307 (348)
T 3two_A 234 ELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYG------SLIGGIKETQEMVDFSI 307 (348)
T ss_dssp CEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEE------CCSCCHHHHHHHHHHHH
T ss_pred CCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEE------EecCCHHHHHHHHHHHH
Confidence 68999999999878999999999999999999987 6665 7877887 99999995 444545555 5567888
Q ss_pred cCCCcceeeeeceee
Q 034260 80 GQTPKLIQATLFDLF 94 (100)
Q Consensus 80 ~~~~~~i~~~~~~~~ 94 (100)
++..+.+. +.++|+
T Consensus 308 ~g~l~~~~-~~~~l~ 321 (348)
T 3two_A 308 KHNIYPEI-DLILGK 321 (348)
T ss_dssp HTTCCCCE-EEECGG
T ss_pred hCCCCceE-EEEEHH
Confidence 88666554 577765
No 28
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=98.99 E-value=7.1e-10 Score=78.90 Aligned_cols=90 Identities=14% Similarity=0.103 Sum_probs=67.0
Q ss_pred CCcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCC-cccChHHHHhcCcEEEeEeeceeeeeechhhH-----HHH
Q 034260 2 GAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHD-MTVPLTPAAARYLIYGFLFFFFLVLGYSVIYF-----RKM 75 (100)
Q Consensus 2 G~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~-~~i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~~-----~~i 75 (100)
|+|+|+++||+|. .++++++++++++|+++.+|....+ .+++...+..|++++.|+.. +++...++++ +.+
T Consensus 215 ~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 291 (334)
T 3qwb_A 215 GKGVDASFDSVGK-DTFEISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQL--YGYIADPEEWKYYSDEFF 291 (334)
T ss_dssp TSCEEEEEECCGG-GGHHHHHHHEEEEEEEEECCCTTCCCCCBCGGGGTTTTCEEECCCG--GGGSCSHHHHHHHHHHHH
T ss_pred CCCceEEEECCCh-HHHHHHHHHhccCCEEEEEcCCCCCCCCcchhhhhhCceEEEEEEe--ccccCCHHHHHHHHHHHH
Confidence 4579999999998 6899999999999999999987754 36788888899999996442 2222233332 345
Q ss_pred HHHhcCCCcceeeeeceee
Q 034260 76 LYISGQTPKLIQATLFDLF 94 (100)
Q Consensus 76 ~~l~~~~~~~i~~~~~~~~ 94 (100)
.+++++..+...+..++++
T Consensus 292 ~l~~~g~l~~~i~~~~~l~ 310 (334)
T 3qwb_A 292 GLVNSKKLNIKIYKTYPLR 310 (334)
T ss_dssp HHHHTTSSCCCEEEEEEGG
T ss_pred HHHHCCCccCceeeEEcHH
Confidence 6777776555555777775
No 29
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=98.98 E-value=3.5e-10 Score=82.40 Aligned_cols=86 Identities=13% Similarity=0.145 Sum_probs=64.7
Q ss_pred CcccEEEEccChH--------------HHHHHHHHhccCCCEEEEecCCC-------------CCcccChHHHHhcCcEE
Q 034260 3 AGIDVSFDCAGLN--------------KTMSTVLDATRAGDKVCLVGMGH-------------HDMTVPLTPAAARYLIY 55 (100)
Q Consensus 3 ~G~D~vie~~G~~--------------~~~~~al~~l~~gGrvv~vG~~~-------------~~~~i~~~~l~~k~~~i 55 (100)
+|+|++|||+|.+ .++++++++++++||++++|... .+.++++..++.|++++
T Consensus 253 ~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i 332 (398)
T 2dph_A 253 PEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRI 332 (398)
T ss_dssp SCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCCCSCCSSCSSHHHHTTEEEEEHHHHHHTTCEE
T ss_pred CCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEeccccccccccccccccCCcccccHHHHhhcCCEE
Confidence 4799999999975 37999999999999999999872 23467777888999999
Q ss_pred EeEeeceeeeeechhhH-HHHHHHhcCCCc--c--eeeeeceee
Q 034260 56 GFLFFFFLVLGYSVIYF-RKMLYISGQTPK--L--IQATLFDLF 94 (100)
Q Consensus 56 ~Gs~~~~g~~~~~~~~~-~~i~~l~~~~~~--~--i~~~~~~~~ 94 (100)
.| +.....+++ +.+.+++++..+ . +.++.++|+
T Consensus 333 ~g------~~~~~~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~ 370 (398)
T 2dph_A 333 MT------GMAPVTNYNRHLTEAILWDQMPYLSKVMNIEVITLD 370 (398)
T ss_dssp EC------SSCCGGGTHHHHHHHHHTTCCHHHHHHHCEEEECST
T ss_pred EE------eccCcHHHHHHHHHHHHcCCCCccchhhEEEEEcHH
Confidence 85 433334555 567788887665 2 334677775
No 30
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=98.98 E-value=6.7e-10 Score=79.95 Aligned_cols=83 Identities=14% Similarity=0.168 Sum_probs=64.9
Q ss_pred CCcccEEEEccChHH--HHHHHHHhccCCCEEEEecCCCCCcccChHHHHhcCcEEEeEeeceeeeeechhhH-HHHHHH
Q 034260 2 GAGIDVSFDCAGLNK--TMSTVLDATRAGDKVCLVGMGHHDMTVPLTPAAARYLIYGFLFFFFLVLGYSVIYF-RKMLYI 78 (100)
Q Consensus 2 G~G~D~vie~~G~~~--~~~~al~~l~~gGrvv~vG~~~~~~~i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~~-~~i~~l 78 (100)
|+|+|++|||+|.+. ++++++++ ++|+++.+|....+ ++++..++.|++++.| ++.++++++ +.+.++
T Consensus 252 g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~~-~~~~~~~~~~~~~i~g------~~~~~~~~~~~~~~l~ 322 (359)
T 1h2b_A 252 GRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGEL-RFPTIRVISSEVSFEG------SLVGNYVELHELVTLA 322 (359)
T ss_dssp TCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSCC-CCCHHHHHHTTCEEEE------CCSCCHHHHHHHHHHH
T ss_pred CCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCCC-CCCHHHHHhCCcEEEE------ecCCCHHHHHHHHHHH
Confidence 347999999999987 89999998 99999999987766 7888888999999995 444445555 567788
Q ss_pred hcCCCcceeeeeceee
Q 034260 79 SGQTPKLIQATLFDLF 94 (100)
Q Consensus 79 ~~~~~~~i~~~~~~~~ 94 (100)
.++..+.+. +.++|+
T Consensus 323 ~~g~l~~~i-~~~~l~ 337 (359)
T 1h2b_A 323 LQGKVRVEV-DIHKLD 337 (359)
T ss_dssp HTTSCCCCE-EEEEGG
T ss_pred HcCCCcceE-EEEeHH
Confidence 877644444 667765
No 31
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=98.98 E-value=7.9e-10 Score=78.99 Aligned_cols=86 Identities=19% Similarity=0.158 Sum_probs=66.5
Q ss_pred CcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCC-cccChHHHHhcCcEEEeEeeceeeeeechhhH-HHHHHHhc
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHD-MTVPLTPAAARYLIYGFLFFFFLVLGYSVIYF-RKMLYISG 80 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~-~~i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~~-~~i~~l~~ 80 (100)
+++|++|||+| ..++++++++++++|+++.+|....+ .++++..++.|++++.| +..+..+++ +.+.++++
T Consensus 234 ~~~d~vi~~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g------~~~~~~~~~~~~~~l~~~ 306 (343)
T 2eih_A 234 KGADKVVDHTG-ALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILG------STMASKSRLFPILRFVEE 306 (343)
T ss_dssp TCEEEEEESSC-SSSHHHHHHHEEEEEEEEESSCCCSCCCCCCTTHHHHTTCEEEE------CCSCCGGGHHHHHHHHHH
T ss_pred CCceEEEECCC-HHHHHHHHHhhccCCEEEEEecCCCCcCccCHHHHHhCCcEEEE------ecCccHHHHHHHHHHHHc
Confidence 47999999999 67899999999999999999987654 35777888899999995 433334555 56778887
Q ss_pred CCCcceeeeeceeee
Q 034260 81 QTPKLIQATLFDLFF 95 (100)
Q Consensus 81 ~~~~~i~~~~~~~~~ 95 (100)
+..+.+.++.++|+-
T Consensus 307 g~l~~~i~~~~~l~~ 321 (343)
T 2eih_A 307 GKLKPVVGQVLPLEA 321 (343)
T ss_dssp TSSCCCEEEEEEGGG
T ss_pred CCCCCceeEEeeHHH
Confidence 765555567778753
No 32
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=98.96 E-value=1.1e-09 Score=78.28 Aligned_cols=85 Identities=11% Similarity=-0.018 Sum_probs=67.5
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC-CcccChHHHHhcCcEEEeEeeceeeeeechhhH-HHHHHHhcC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH-DMTVPLTPAAARYLIYGFLFFFFLVLGYSVIYF-RKMLYISGQ 81 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~-~~~i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~~-~~i~~l~~~ 81 (100)
++|++||++|.+.++++++++++++|+++.+|.... +.++++..++.|++++.| ++.++++++ +.+.+++++
T Consensus 238 ~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g------~~~~~~~~~~~~~~l~~~g 311 (347)
T 2hcy_A 238 GAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVG------SYVGNRADTREALDFFARG 311 (347)
T ss_dssp CEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTCEEEEEHHHHHHTTCEEEE------CCCCCHHHHHHHHHHHHTT
T ss_pred CCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhhCCcEEEE------ccCCCHHHHHHHHHHHHhC
Confidence 799999999998899999999999999999998763 467788888899999995 444444555 567788888
Q ss_pred CCcceeeeeceeee
Q 034260 82 TPKLIQATLFDLFF 95 (100)
Q Consensus 82 ~~~~i~~~~~~~~~ 95 (100)
..+.+. +.++|+.
T Consensus 312 ~l~~~~-~~~~l~~ 324 (347)
T 2hcy_A 312 LVKSPI-KVVGLST 324 (347)
T ss_dssp SCCCCE-EEEEGGG
T ss_pred CCccce-EEEcHHH
Confidence 666554 4677753
No 33
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=98.96 E-value=4e-10 Score=81.59 Aligned_cols=85 Identities=5% Similarity=-0.057 Sum_probs=61.6
Q ss_pred CcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCc-ccChHHHHhcCcEEEeEeeceeeeeechhhH-HHHHHHhc
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDM-TVPLTPAAARYLIYGFLFFFFLVLGYSVIYF-RKMLYISG 80 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~-~i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~~-~~i~~l~~ 80 (100)
+++|++|||+|.+.++++++++++++|+++.+|....+. +++...++.|++++.| ++.+..+++ +.+.++++
T Consensus 256 ~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g------~~~~~~~~~~~~~~l~~~ 329 (369)
T 1uuf_A 256 KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAG------SMIGGIPETQEMLDFCAE 329 (369)
T ss_dssp TCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEE------CCSCCHHHHHHHHHHHHH
T ss_pred cCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCCccccCHHHHHhCCcEEEE------eecCCHHHHHHHHHHHHh
Confidence 379999999998778999999999999999999876655 6788888899999995 443444545 55677777
Q ss_pred CCCcceeeeeceee
Q 034260 81 QTPKLIQATLFDLF 94 (100)
Q Consensus 81 ~~~~~i~~~~~~~~ 94 (100)
+..+...+ .++|+
T Consensus 330 g~i~~~i~-~~~l~ 342 (369)
T 1uuf_A 330 HGIVADIE-MIRAD 342 (369)
T ss_dssp HTCCCCEE-EECGG
T ss_pred CCCCcceE-EEcHH
Confidence 65444443 57765
No 34
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=98.94 E-value=4.6e-10 Score=80.75 Aligned_cols=83 Identities=10% Similarity=0.058 Sum_probs=64.2
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcc-cChHHHHhcCcEEEeEeeceeeeeechhhH-HHHHHHhcC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMT-VPLTPAAARYLIYGFLFFFFLVLGYSVIYF-RKMLYISGQ 81 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~-i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~~-~~i~~l~~~ 81 (100)
++|++|||+|.+.++++++++++++|+++.+|....+.+ ++.. ++.|++++.| ++.+..+++ +.+.+++++
T Consensus 244 g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~-~~~~~~~i~g------~~~~~~~~~~~~~~l~~~g 316 (357)
T 2cf5_A 244 SLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPL-LMLGRKVITG------SFIGSMKETEEMLEFCKEK 316 (357)
T ss_dssp TEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSCCCCCHHH-HHHHTCEEEE------CCSCCHHHHHHHHHHHHHT
T ss_pred CCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCCccccCHH-HHhCccEEEE------EccCCHHHHHHHHHHHHcC
Confidence 799999999987789999999999999999998765554 6666 8899999995 444444555 566788877
Q ss_pred CCcceeeeeceee
Q 034260 82 TPKLIQATLFDLF 94 (100)
Q Consensus 82 ~~~~i~~~~~~~~ 94 (100)
..+... +.+||+
T Consensus 317 ~l~~~~-~~~~l~ 328 (357)
T 2cf5_A 317 GLSSII-EVVKMD 328 (357)
T ss_dssp TCCCCE-EEEEGG
T ss_pred CCCCce-EEEeHH
Confidence 654444 477765
No 35
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=98.93 E-value=7.9e-10 Score=79.83 Aligned_cols=84 Identities=11% Similarity=0.004 Sum_probs=66.1
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccChHHHHhcCcEEEeEeeceeeeeechhhH-HHHHHHhcCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPLTPAAARYLIYGFLFFFFLVLGYSVIYF-RKMLYISGQT 82 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~~-~~i~~l~~~~ 82 (100)
++|++|||+|.+.++++++++++++|+++.+|....+.+++...++.|++++.| ++.+..+++ +.+.+++++.
T Consensus 251 ~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g------~~~~~~~~~~~~~~l~~~g~ 324 (366)
T 1yqd_A 251 TLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVAG------SGIGGMKETQEMIDFAAKHN 324 (366)
T ss_dssp CEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSCEEECHHHHHTTTCEEEE------CCSCCHHHHHHHHHHHHHTT
T ss_pred CCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCCCCcCHHHHHhCCcEEEE------ecCCCHHHHHHHHHHHHcCC
Confidence 799999999987778999999999999999998876667888889999999995 443444444 6677787776
Q ss_pred Ccceeeeeceee
Q 034260 83 PKLIQATLFDLF 94 (100)
Q Consensus 83 ~~~i~~~~~~~~ 94 (100)
.+... +.+||+
T Consensus 325 l~~~~-~~~~l~ 335 (366)
T 1yqd_A 325 ITADI-EVISTD 335 (366)
T ss_dssp CCCCE-EEECGG
T ss_pred CCCce-EEEcHH
Confidence 44444 467765
No 36
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=98.92 E-value=6e-10 Score=80.30 Aligned_cols=86 Identities=10% Similarity=0.134 Sum_probs=66.8
Q ss_pred CcccEEEEccChHHHH-HHHHHhccCCCEEEEecCCCCC-cccChHH---HHhcCcEEEeEeeceeeeeechhhH-HHHH
Q 034260 3 AGIDVSFDCAGLNKTM-STVLDATRAGDKVCLVGMGHHD-MTVPLTP---AAARYLIYGFLFFFFLVLGYSVIYF-RKML 76 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~-~~al~~l~~gGrvv~vG~~~~~-~~i~~~~---l~~k~~~i~Gs~~~~g~~~~~~~~~-~~i~ 76 (100)
+++|++|||+|.+.++ ++++++++++|+++.+|....+ .+++... ++.|++++.| +..+.++++ +.+.
T Consensus 245 ~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g------~~~~~~~~~~~~~~ 318 (366)
T 2cdc_A 245 GKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTNKTIIG------LVNGQKPHFQQAVV 318 (366)
T ss_dssp CCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSCEEEEEHHHHHHHHHTTCEEEE------CCCCCHHHHHHHHH
T ss_pred CCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCCccccChhhhHHHHhcCcEEEE------ecCCCHHHHHHHHH
Confidence 4799999999997788 9999999999999999987654 6778777 8899999995 444445555 5567
Q ss_pred HHhcCC------Ccceeeeeceee
Q 034260 77 YISGQT------PKLIQATLFDLF 94 (100)
Q Consensus 77 ~l~~~~------~~~i~~~~~~~~ 94 (100)
+++++. .+.+.+++++|+
T Consensus 319 l~~~g~i~~~~~~~~~i~~~~~l~ 342 (366)
T 2cdc_A 319 HLASWKTLYPKAAKMLITKTVSIN 342 (366)
T ss_dssp HHHHHHHHSHHHHTTSEEEEEETT
T ss_pred HHHcCCCCcccchhhcEEEEEcHH
Confidence 777765 445445677775
No 37
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=98.91 E-value=1.1e-09 Score=78.55 Aligned_cols=87 Identities=13% Similarity=0.082 Sum_probs=61.3
Q ss_pred CCcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcc--cChHH--HHhcCcEEEeEeeceeeeee-chhhH-HHH
Q 034260 2 GAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMT--VPLTP--AAARYLIYGFLFFFFLVLGY-SVIYF-RKM 75 (100)
Q Consensus 2 G~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~--i~~~~--l~~k~~~i~Gs~~~~g~~~~-~~~~~-~~i 75 (100)
|+|+|++|||+|.+.++++++++++++||++.+|....+.+ ++... +..+++++.| +..+ .++++ +.+
T Consensus 233 g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g------~~~~~~~~~~~~~~ 306 (352)
T 3fpc_A 233 GKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHG------GLCPGGRLRMERLI 306 (352)
T ss_dssp TCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEE------BCCCCHHHHHHHHH
T ss_pred CCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEE------eeccCchhHHHHHH
Confidence 45899999999998899999999999999999998765433 33222 3468999985 3332 23444 567
Q ss_pred HHHhcCCC--cceeeeece-ee
Q 034260 76 LYISGQTP--KLIQATLFD-LF 94 (100)
Q Consensus 76 ~~l~~~~~--~~i~~~~~~-~~ 94 (100)
.+++++.. +.+.+..++ |+
T Consensus 307 ~l~~~g~i~~~~~i~~~~~gl~ 328 (352)
T 3fpc_A 307 DLVFYKRVDPSKLVTHVFRGFD 328 (352)
T ss_dssp HHHHTTSCCGGGGEEEEEESTT
T ss_pred HHHHcCCCChhHhheeeCCCHH
Confidence 78888753 333446666 54
No 38
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=98.90 E-value=3.4e-09 Score=77.05 Aligned_cols=88 Identities=14% Similarity=0.175 Sum_probs=64.0
Q ss_pred CCcccEEEEccChH---------------HHHHHHHHhccCCCEEEEecCCC--C-----------CcccChHHHHhcCc
Q 034260 2 GAGIDVSFDCAGLN---------------KTMSTVLDATRAGDKVCLVGMGH--H-----------DMTVPLTPAAARYL 53 (100)
Q Consensus 2 G~G~D~vie~~G~~---------------~~~~~al~~l~~gGrvv~vG~~~--~-----------~~~i~~~~l~~k~~ 53 (100)
|+|+|++|||+|.+ .++++++++++++|+++++|... . ..+++...++.|++
T Consensus 252 g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (398)
T 1kol_A 252 EPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSH 331 (398)
T ss_dssp SSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTCCCCCHHHHHHTTC
T ss_pred CCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEeccccCCcccccccccccccccccHHHHhhccc
Confidence 35899999999975 38999999999999999999762 1 23566777889999
Q ss_pred EEEeEeeceeeeeechhhH-HHHHHHhcCCCc---ceeeeeceeee
Q 034260 54 IYGFLFFFFLVLGYSVIYF-RKMLYISGQTPK---LIQATLFDLFF 95 (100)
Q Consensus 54 ~i~Gs~~~~g~~~~~~~~~-~~i~~l~~~~~~---~i~~~~~~~~~ 95 (100)
++.| +.....++. +.+.++.++..+ .+.+++++|+-
T Consensus 332 ~~~g------~~~~~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~ 371 (398)
T 1kol_A 332 SFHT------GQTPVMKYNRALMQAIMWDRINIAEVVGVQVISLDD 371 (398)
T ss_dssp EEEE------SSCCHHHHHHHHHHHHHTTSCCHHHHHTEEEECGGG
T ss_pred EEEe------cccChHHHHHHHHHHHHcCCCCCccceeEEEEcHHH
Confidence 9985 332223444 456788887655 34456777753
No 39
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=98.89 E-value=1.7e-09 Score=77.48 Aligned_cols=89 Identities=7% Similarity=-0.133 Sum_probs=61.4
Q ss_pred CcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC-CcccCh-HHHHhcCcEEEeEeeceeeeee-c----hhhH-HH
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH-DMTVPL-TPAAARYLIYGFLFFFFLVLGY-S----VIYF-RK 74 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~-~~~i~~-~~l~~k~~~i~Gs~~~~g~~~~-~----~~~~-~~ 74 (100)
+|+|++|||+|.+ ..++++++++++|+++.+|.... +.+++. ..++.|++++.|++. +.+.. . .+++ +.
T Consensus 232 ~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~--~~~~~~~~~~~~~~~~~~ 308 (349)
T 3pi7_A 232 EQPRIFLDAVTGP-LASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWL--SEWMRQFKERRGPAILEA 308 (349)
T ss_dssp HCCCEEEESSCHH-HHHHHHHHSCTTCEEEECCCSCCSCCCCSCTHHHHHSCCEEEECCH--HHHHHHTHHHHHHHHHHC
T ss_pred CCCcEEEECCCCh-hHHHHHhhhcCCCEEEEEeccCCCCCCCCchhhhhccccEEEEEEe--hhhhhhCcHHHHHHHHHH
Confidence 4799999999986 46899999999999999997654 566787 889999999996432 11100 0 1223 22
Q ss_pred HHHHhcCCCcceeeeeceee
Q 034260 75 MLYISGQTPKLIQATLFDLF 94 (100)
Q Consensus 75 i~~l~~~~~~~i~~~~~~~~ 94 (100)
+.+++++..+.+.+.+++|+
T Consensus 309 ~~l~~~g~l~~~i~~~~~l~ 328 (349)
T 3pi7_A 309 QKRFSDGRWSTDVTAVVPLA 328 (349)
T ss_dssp -CTTTTSSCCC-CCEEEEHH
T ss_pred HHHHHcCCcccccceEEcHH
Confidence 44666665555555777765
No 40
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=98.88 E-value=7.5e-09 Score=74.27 Aligned_cols=80 Identities=9% Similarity=0.110 Sum_probs=57.5
Q ss_pred CCcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC-CcccChHHHHhcCcEEEeEeeceeeee-ec----hhhH-HH
Q 034260 2 GAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH-DMTVPLTPAAARYLIYGFLFFFFLVLG-YS----VIYF-RK 74 (100)
Q Consensus 2 G~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~-~~~i~~~~l~~k~~~i~Gs~~~~g~~~-~~----~~~~-~~ 74 (100)
|+|+|++|||+|.+... +++++++++|+++.+|.... +.+++...++.|++++.|++. +.+. .. .+++ +.
T Consensus 243 ~~g~Dvvid~~G~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~ 319 (364)
T 1gu7_A 243 GGEAKLALNCVGGKSST-GIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWV--TELLKNNKELKTSTLNQI 319 (364)
T ss_dssp TCCEEEEEESSCHHHHH-HHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEEEECCH--HHHHTTCHHHHHHHHHHH
T ss_pred CCCceEEEECCCchhHH-HHHHHhccCCEEEEecCCCCCCcccCHHHHhhcCcEEEEEch--hHhcccCHHHHHHHHHHH
Confidence 35799999999987655 89999999999999998653 566788888899999996432 1110 00 2334 45
Q ss_pred HHHHhcCCCc
Q 034260 75 MLYISGQTPK 84 (100)
Q Consensus 75 i~~l~~~~~~ 84 (100)
+.+++++..+
T Consensus 320 ~~l~~~g~l~ 329 (364)
T 1gu7_A 320 IAWYEEGKLT 329 (364)
T ss_dssp HHHHHHTCCC
T ss_pred HHHHHcCCcc
Confidence 6777777533
No 41
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=98.87 E-value=5.3e-10 Score=80.44 Aligned_cols=83 Identities=12% Similarity=0.186 Sum_probs=64.9
Q ss_pred cccEEEEccCh--HHHHHHHHHhccCCCEEEEecCCCCCc-ccChHHHHhcCcEEEeEeeceeeeeechhhH-HHHHHHh
Q 034260 4 GIDVSFDCAGL--NKTMSTVLDATRAGDKVCLVGMGHHDM-TVPLTPAAARYLIYGFLFFFFLVLGYSVIYF-RKMLYIS 79 (100)
Q Consensus 4 G~D~vie~~G~--~~~~~~al~~l~~gGrvv~vG~~~~~~-~i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~~-~~i~~l~ 79 (100)
++|++|||+|. +.++++++++++++|+++.+|.... . +++...++.|++++.| ++.++++++ +.+.+++
T Consensus 243 ~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~i~g------~~~~~~~~~~~~~~l~~ 315 (360)
T 1piw_A 243 TFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ-HEMLSLKPYGLKAVSISY------SALGSIKELNQLLKLVS 315 (360)
T ss_dssp CEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS-SCCEEECGGGCBSCEEEE------CCCCCHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC-ccccCHHHHHhCCeEEEE------EecCCHHHHHHHHHHHH
Confidence 79999999998 7789999999999999999998766 5 5777778899999995 444444555 6677888
Q ss_pred cCCCcceeeeeceee
Q 034260 80 GQTPKLIQATLFDLF 94 (100)
Q Consensus 80 ~~~~~~i~~~~~~~~ 94 (100)
++..+... ++++|+
T Consensus 316 ~g~l~~~i-~~~~l~ 329 (360)
T 1piw_A 316 EKDIKIWV-ETLPVG 329 (360)
T ss_dssp HTTCCCCE-EEEESS
T ss_pred hCCCcceE-EEEecc
Confidence 77544444 567765
No 42
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=98.86 E-value=1.3e-09 Score=77.28 Aligned_cols=55 Identities=16% Similarity=0.193 Sum_probs=48.0
Q ss_pred CcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC-CcccChHHHHhcCcEEEeE
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH-DMTVPLTPAAARYLIYGFL 58 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~-~~~i~~~~l~~k~~~i~Gs 58 (100)
+++|++|||+|. +++++++++++++||++++|.... +.+++...++.|++++.|+
T Consensus 216 ~~~d~vid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~ 271 (330)
T 1tt7_A 216 QQWQGAVDPVGG-KQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGI 271 (330)
T ss_dssp CCEEEEEESCCT-HHHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEEC
T ss_pred CCccEEEECCcH-HHHHHHHHhhcCCCEEEEEecCCCCccCcchHHHHhcCeEEEEE
Confidence 479999999998 589999999999999999998764 4567777888999999964
No 43
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=98.85 E-value=5e-09 Score=74.61 Aligned_cols=89 Identities=15% Similarity=0.086 Sum_probs=64.7
Q ss_pred CcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC------CcccChHHHHhcCcEEEeEeeceeeeee-chhhH-HH
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH------DMTVPLTPAAARYLIYGFLFFFFLVLGY-SVIYF-RK 74 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~------~~~i~~~~l~~k~~~i~Gs~~~~g~~~~-~~~~~-~~ 74 (100)
+++|++|||+|. .++++++++++++|+++++|.... +..++...++.|++++.|++. +.+.. ..+.+ +.
T Consensus 224 ~~~d~vi~~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~--~~~~~~~~~~~~~~ 300 (345)
T 2j3h_A 224 NGIDIYFENVGG-KMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVV--SDFYDKYSKFLEFV 300 (345)
T ss_dssp TCEEEEEESSCH-HHHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEEECCG--GGGGGGHHHHHHHH
T ss_pred CCCcEEEECCCH-HHHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhceeeceeee--hhhhhhHHHHHHHH
Confidence 479999999998 689999999999999999997643 345677788899999996331 11100 01223 55
Q ss_pred HHHHhcCCCcceeeeeceee
Q 034260 75 MLYISGQTPKLIQATLFDLF 94 (100)
Q Consensus 75 i~~l~~~~~~~i~~~~~~~~ 94 (100)
+.+++++..+.+.+..++|+
T Consensus 301 ~~l~~~g~i~~~~~~~~~l~ 320 (345)
T 2j3h_A 301 LPHIREGKITYVEDVADGLE 320 (345)
T ss_dssp HHHHHTTSSCCCEEEEESGG
T ss_pred HHHHHCCCCcCcccccCCHH
Confidence 67888887777776677765
No 44
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=98.84 E-value=3.2e-09 Score=75.30 Aligned_cols=91 Identities=16% Similarity=0.067 Sum_probs=65.5
Q ss_pred CCcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCc-ccChHHHHhc-CcEEEeEeeceeeeeechhhH-----HH
Q 034260 2 GAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDM-TVPLTPAAAR-YLIYGFLFFFFLVLGYSVIYF-----RK 74 (100)
Q Consensus 2 G~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~-~i~~~~l~~k-~~~i~Gs~~~~g~~~~~~~~~-----~~ 74 (100)
|+++|+++||+|. .++++++++++++|+++.+|....+. +++...+..+ ++++.+... +++..+++++ +.
T Consensus 207 ~~g~Dvvid~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 283 (325)
T 3jyn_A 207 GKKCPVVYDGVGQ-DTWLTSLDSVAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTL--GSYANNAQNLQTMADEL 283 (325)
T ss_dssp TCCEEEEEESSCG-GGHHHHHTTEEEEEEEEECCCTTCCCCSCCTHHHHHTTSCEEECCCH--HHHSCSTTHHHHHHHHH
T ss_pred CCCceEEEECCCh-HHHHHHHHHhcCCCEEEEEecCCCCCCCCCHHHHhhcCcEEEEeeee--eeecCCHHHHHHHHHHH
Confidence 3589999999998 68999999999999999999887653 6788888777 678764321 2333333333 34
Q ss_pred HHHHhcCCCcceeeeeceeee
Q 034260 75 MLYISGQTPKLIQATLFDLFF 95 (100)
Q Consensus 75 i~~l~~~~~~~i~~~~~~~~~ 95 (100)
+.+++++..+...++.+||+.
T Consensus 284 ~~l~~~g~l~~~i~~~~~l~~ 304 (325)
T 3jyn_A 284 FDMLASGKLKVDGIEQYALKD 304 (325)
T ss_dssp HHHHHTTSSCCCCCEEEEGGG
T ss_pred HHHHHCCCeeCccccEEcHHH
Confidence 567777765554567787753
No 45
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=98.82 E-value=1.1e-09 Score=77.43 Aligned_cols=86 Identities=15% Similarity=0.034 Sum_probs=63.0
Q ss_pred CcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCC-cccChHHHHhcCcEEEeEeeceeeeeech----hhH-HHHH
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHD-MTVPLTPAAARYLIYGFLFFFFLVLGYSV----IYF-RKML 76 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~-~~i~~~~l~~k~~~i~Gs~~~~g~~~~~~----~~~-~~i~ 76 (100)
+++|++|||+|.+ ++++++++++++|+++.+|..... .+++...++.|++++.|++. ....+ +.+ +.+.
T Consensus 210 ~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~~~~~~~~ 284 (324)
T 3nx4_A 210 QLWAGAIDTVGDK-VLAKVLAQMNYGGCVAACGLAGGFALPTTVMPFILRNVRLQGVDS----VMTPPARRAEAWARLVK 284 (324)
T ss_dssp CCEEEEEESSCHH-HHHHHHHTEEEEEEEEECCCTTCSEEEEESHHHHHHCCEEEECCS----TTCCHHHHHHHHHHHHH
T ss_pred CCccEEEECCCcH-HHHHHHHHHhcCCEEEEEecCCCCCCCCCHHHHhhcCeEEEEEec----cccChHHHHHHHHHHHH
Confidence 4799999999985 899999999999999999988653 56788888999999996432 11111 223 3345
Q ss_pred HHhcCCCcceeeeeceee
Q 034260 77 YISGQTPKLIQATLFDLF 94 (100)
Q Consensus 77 ~l~~~~~~~i~~~~~~~~ 94 (100)
+++++..+.+ ++.++|+
T Consensus 285 l~~~g~l~~~-~~~~~l~ 301 (324)
T 3nx4_A 285 DLPESFYAQA-ATEITLA 301 (324)
T ss_dssp HSCHHHHHHH-EEEEEGG
T ss_pred HHHcCCCCCC-ceeEeHH
Confidence 5555555555 6777765
No 46
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=98.82 E-value=5.4e-09 Score=75.04 Aligned_cols=89 Identities=12% Similarity=0.112 Sum_probs=65.3
Q ss_pred CCcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCC-cc-cChHHHHhcCcEEEeEeeceeeeeechhh--------
Q 034260 2 GAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHD-MT-VPLTPAAARYLIYGFLFFFFLVLGYSVIY-------- 71 (100)
Q Consensus 2 G~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~-~~-i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~-------- 71 (100)
|+++|++|||+|.+ .+++++++++++|+++.+|..... .+ +++..++.|++++.|+.. +. ....+
T Consensus 233 ~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~--~~--~~~~~~~~~~~~~ 307 (353)
T 4dup_A 233 GQGVDIILDMIGAA-YFERNIASLAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTM--RP--RTAEEKRAIRDDL 307 (353)
T ss_dssp SSCEEEEEESCCGG-GHHHHHHTEEEEEEEEECCCTTCSEEEEEECHHHHHTTCEEEECCS--TT--SCHHHHHHHHHHH
T ss_pred CCCceEEEECCCHH-HHHHHHHHhccCCEEEEEEecCCCcccCCCHHHHHhcCceEEEEec--cc--cchhhhHHHHHHH
Confidence 45899999999984 899999999999999999987653 34 788889999999996432 11 11110
Q ss_pred H-HHHHHHhcCCCcceeeeeceeee
Q 034260 72 F-RKMLYISGQTPKLIQATLFDLFF 95 (100)
Q Consensus 72 ~-~~i~~l~~~~~~~i~~~~~~~~~ 95 (100)
+ +.+.+++++..+.+.+.+++|+.
T Consensus 308 ~~~~~~l~~~g~l~~~i~~~~~l~~ 332 (353)
T 4dup_A 308 LSEVWPLLEAGTVAPVIHKVFAFED 332 (353)
T ss_dssp HHHTHHHHHHTSSCCCEEEEEEGGG
T ss_pred HHHHHHHHHCCCccCCcceEEeHHH
Confidence 3 34567777765555667788753
No 47
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=98.82 E-value=9.1e-09 Score=73.60 Aligned_cols=90 Identities=16% Similarity=0.108 Sum_probs=63.3
Q ss_pred CCcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccChHHHHhcCcEEEeEeeceeee-ee----chhhH-HHH
Q 034260 2 GAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPLTPAAARYLIYGFLFFFFLVL-GY----SVIYF-RKM 75 (100)
Q Consensus 2 G~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~~~l~~k~~~i~Gs~~~~g~~-~~----~~~~~-~~i 75 (100)
|+|+|++|||+|. +++++++++++++|+++.+|... +++...+..|++++.|++...... .. ..+++ +.+
T Consensus 214 ~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~g~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 289 (343)
T 3gaz_A 214 GQGFDLVYDTLGG-PVLDASFSAVKRFGHVVSCLGWG---THKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREAD 289 (343)
T ss_dssp TSCEEEEEESSCT-HHHHHHHHHEEEEEEEEESCCCS---CCCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHHHHHHH
T ss_pred CCCceEEEECCCc-HHHHHHHHHHhcCCeEEEEcccC---ccccchhhhcCcEEEEEEeccchhcccchHHHHHHHHHHH
Confidence 4589999999997 68999999999999999999775 456778889999999643200000 00 11334 456
Q ss_pred HHHhcCCCcceee-eeceeee
Q 034260 76 LYISGQTPKLIQA-TLFDLFF 95 (100)
Q Consensus 76 ~~l~~~~~~~i~~-~~~~~~~ 95 (100)
.+++++..+.+.+ ..++|+.
T Consensus 290 ~l~~~g~l~~~i~~~~~~l~~ 310 (343)
T 3gaz_A 290 ALVQTGKLAPRLDPRTFSIAE 310 (343)
T ss_dssp HHHHTTCCCCCBCSCCEETTC
T ss_pred HHHHCCCcccCccCcEecHHH
Confidence 6788876555555 5777753
No 48
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=98.79 E-value=1.6e-08 Score=72.95 Aligned_cols=55 Identities=9% Similarity=0.106 Sum_probs=47.3
Q ss_pred CCcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccChHHHHhcCcEEEeEe
Q 034260 2 GAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPLTPAAARYLIYGFLF 59 (100)
Q Consensus 2 G~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~~~l~~k~~~i~Gs~ 59 (100)
++|+|++|||+|.+.++++++++++++|+++++|. +.+++...+..|++++.|++
T Consensus 237 ~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~---~~~~~~~~~~~k~~~i~~~~ 291 (363)
T 4dvj_A 237 LGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDD---PSAFDIMLFKRKAVSIHHEL 291 (363)
T ss_dssp SCCEEEEEECSCHHHHHHHHHHHSCTTCEEEECSC---CSSCCGGGGTTTTCEEEECC
T ss_pred CCCceEEEECCCchhhHHHHHHHhcCCCEEEEECC---CCccchHHHhhccceEEEEE
Confidence 45899999999998899999999999999999964 34577788889999999643
No 49
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=98.79 E-value=4.4e-09 Score=75.33 Aligned_cols=91 Identities=14% Similarity=0.058 Sum_probs=55.5
Q ss_pred CCcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC-----------------CcccChHHHHhcCcEEEeEeeceee
Q 034260 2 GAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH-----------------DMTVPLTPAAARYLIYGFLFFFFLV 64 (100)
Q Consensus 2 G~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~-----------------~~~i~~~~l~~k~~~i~Gs~~~~g~ 64 (100)
++|+|++|||+|.+. .++++++++++||++++|.... ..++++..++.+++++.|+.. +.
T Consensus 206 ~~g~Dvv~d~~g~~~-~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~--~~ 282 (349)
T 4a27_A 206 AEGVDIVLDCLCGDN-TGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSL--LN 282 (349)
T ss_dssp TTCEEEEEEECC--------CTTEEEEEEEEEEC-------------------------CHHHHHHHTCEEEEECH--HH
T ss_pred CCCceEEEECCCchh-HHHHHHHhhcCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEee--hh
Confidence 458999999999864 5999999999999999997641 123667788899999996432 11
Q ss_pred ee--e-----chhhH-HHHHHHhcCCCcceeeeeceeee
Q 034260 65 LG--Y-----SVIYF-RKMLYISGQTPKLIQATLFDLFF 95 (100)
Q Consensus 65 ~~--~-----~~~~~-~~i~~l~~~~~~~i~~~~~~~~~ 95 (100)
+. . .++++ +.+.+++++..+.+.+.+++|+-
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~ 321 (349)
T 4a27_A 283 LLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEE 321 (349)
T ss_dssp HHHTSCCHHHHHHHHHHHHHHHHTTSCCCCEEEEECGGG
T ss_pred eeccccchHHHHHHHHHHHHHHHCCCccccccceECHHH
Confidence 10 0 03344 45677888766666667788753
No 50
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=98.77 E-value=1.5e-08 Score=72.45 Aligned_cols=86 Identities=7% Similarity=0.033 Sum_probs=60.6
Q ss_pred CCcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccChHHHHhcCcEEEeEeeceeee-eec-------hhhH-
Q 034260 2 GAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPLTPAAARYLIYGFLFFFFLVL-GYS-------VIYF- 72 (100)
Q Consensus 2 G~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~~~l~~k~~~i~Gs~~~~g~~-~~~-------~~~~- 72 (100)
++++|+++||+|.+.++++++++++++|+++.+|.. +.+++...+..|++++.|++. ... .+. .+++
T Consensus 215 ~~g~Dvv~d~~g~~~~~~~~~~~l~~~G~iv~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 290 (346)
T 3fbg_A 215 IELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAF--ENDQDLNALKPKSLSFSHEFM--FARPLNQTDDMIKHHEYLE 290 (346)
T ss_dssp CCCEEEEEESSCHHHHHHHHHHHEEEEEEEEESSCC--SSCBCGGGGTTTTCEEEECCT--THHHHTTCTTTHHHHHHHH
T ss_pred CCCccEEEECCCchHHHHHHHHHhccCCEEEEECCC--CCCCccccccccceEEEEEEE--ecccccchhhHHHHHHHHH
Confidence 458999999999988899999999999999998854 345677778889999996432 110 000 1223
Q ss_pred HHHHHHhcCCCcceeeeec
Q 034260 73 RKMLYISGQTPKLIQATLF 91 (100)
Q Consensus 73 ~~i~~l~~~~~~~i~~~~~ 91 (100)
+.+.+++++..+.+.+..+
T Consensus 291 ~~~~l~~~g~l~~~i~~~~ 309 (346)
T 3fbg_A 291 DITNKVEQNIYQPTTTKVI 309 (346)
T ss_dssp HHHHHHHTTSSCCCEEEEE
T ss_pred HHHHHHHCCCEECCcccee
Confidence 4456777776555544554
No 51
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=98.75 E-value=1.9e-08 Score=71.46 Aligned_cols=90 Identities=14% Similarity=0.062 Sum_probs=62.2
Q ss_pred CCcccEEEEccChHHHHHHHHHhccCCCEEEEecCCC-----C--CcccChHHHHhcCcEEEeEeeceeeeee-chhhH-
Q 034260 2 GAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGH-----H--DMTVPLTPAAARYLIYGFLFFFFLVLGY-SVIYF- 72 (100)
Q Consensus 2 G~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~-----~--~~~i~~~~l~~k~~~i~Gs~~~~g~~~~-~~~~~- 72 (100)
++++|+++||+|. .++++++++++++|+++++|... . ..+++...++.|++++.|+.. +.+.. .++++
T Consensus 216 ~~~~d~vi~~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~--~~~~~~~~~~~~ 292 (336)
T 4b7c_A 216 PKGIDVFFDNVGG-EILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVV--MDYAQRFPEGLK 292 (336)
T ss_dssp TTCEEEEEESSCH-HHHHHHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCG--GGGGGGHHHHHH
T ss_pred CCCceEEEECCCc-chHHHHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEh--hhhhhhhHHHHH
Confidence 4579999999997 68999999999999999999865 1 135677788999999996432 11100 11334
Q ss_pred HHHHHHhcCCCcceeeeeceee
Q 034260 73 RKMLYISGQTPKLIQATLFDLF 94 (100)
Q Consensus 73 ~~i~~l~~~~~~~i~~~~~~~~ 94 (100)
+.+.+++++..+......++|+
T Consensus 293 ~~~~l~~~g~l~~~~~~~~~l~ 314 (336)
T 4b7c_A 293 EMATWLAEGKLQSREDIVEGLE 314 (336)
T ss_dssp HHHHHHHTTSSCCCEEEEECGG
T ss_pred HHHHHHHCCCcccceeeecCHH
Confidence 4566788776444443334554
No 52
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=98.75 E-value=9e-09 Score=73.12 Aligned_cols=90 Identities=18% Similarity=0.119 Sum_probs=65.6
Q ss_pred CCcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC-CcccChH-HHHhcC--cEEEeEeeceeeeeech----hhH-
Q 034260 2 GAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH-DMTVPLT-PAAARY--LIYGFLFFFFLVLGYSV----IYF- 72 (100)
Q Consensus 2 G~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~-~~~i~~~-~l~~k~--~~i~Gs~~~~g~~~~~~----~~~- 72 (100)
++++|++|||+|. .++++++++++++|+++.+|.... +.+++.. .++.|+ +++.|++. .+...+ +++
T Consensus 212 ~~~~d~vi~~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~---~~~~~~~~~~~~~~ 287 (333)
T 1wly_A 212 GKGVDVVYDSIGK-DTLQKSLDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALW---HYMSNRSEIDEGSK 287 (333)
T ss_dssp TCCEEEEEECSCT-TTHHHHHHTEEEEEEEEECCCTTCCCCCCCHHHHTTTTTSCEEECCCGG---GGSCSHHHHHHHHH
T ss_pred CCCCeEEEECCcH-HHHHHHHHhhccCCEEEEEecCCCCcCCCChhHhhhhcCCcEEEEEeeh---hhccCHHHHHHHHH
Confidence 3479999999998 789999999999999999998764 4567777 788899 99987542 111122 234
Q ss_pred HHHHHHhcCCCcceeeeeceeee
Q 034260 73 RKMLYISGQTPKLIQATLFDLFF 95 (100)
Q Consensus 73 ~~i~~l~~~~~~~i~~~~~~~~~ 95 (100)
+.+.++.++..+.+.++.++|+-
T Consensus 288 ~~~~l~~~g~l~~~i~~~~~l~~ 310 (333)
T 1wly_A 288 CLFDAVKAGVLHSSVAKTFPLRE 310 (333)
T ss_dssp HHHHHHHTTSCCCCEEEEEEGGG
T ss_pred HHHHHHHCCCcCCCcceEEeHHH
Confidence 44667877765555567778753
No 53
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=98.75 E-value=4.2e-08 Score=70.38 Aligned_cols=88 Identities=10% Similarity=0.047 Sum_probs=61.4
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCC-CCcccChHHHHhcCcEEEeEeeceeeee--ec----hhhH-HHH
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGH-HDMTVPLTPAAARYLIYGFLFFFFLVLG--YS----VIYF-RKM 75 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~-~~~~i~~~~l~~k~~~i~Gs~~~~g~~~--~~----~~~~-~~i 75 (100)
++|++|||+|.+.+ .+++++++++|+++.+|... .+.+++...+..|++++.|++. +.+. .. .+++ +.+
T Consensus 240 ~~Dvvid~~g~~~~-~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~--~~~~~~~~~~~~~~~~~~~~ 316 (357)
T 1zsy_A 240 QPRLALNCVGGKSS-TELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWL--SQWKKDHSPDQFKELILTLC 316 (357)
T ss_dssp CCSEEEESSCHHHH-HHHHTTSCTTCEEEECCCCTTCCBCCCHHHHHHSCCEEEECCH--HHHHHHSCHHHHHHHHHHHH
T ss_pred CceEEEECCCcHHH-HHHHHhhCCCCEEEEEecCCCCCCCCCHHHHHhcCceEEEEEc--chhcccCCHHHHHHHHHHHH
Confidence 59999999998654 67999999999999998654 3567888888899999996432 1110 01 1223 445
Q ss_pred HHHhcCCCcceeeeeceee
Q 034260 76 LYISGQTPKLIQATLFDLF 94 (100)
Q Consensus 76 ~~l~~~~~~~i~~~~~~~~ 94 (100)
.++.++..+......++|+
T Consensus 317 ~l~~~g~l~~~~~~~~~l~ 335 (357)
T 1zsy_A 317 DLIRRGQLTAPACSQVPLQ 335 (357)
T ss_dssp HHHHTTSSCCCCEEEEEGG
T ss_pred HHHHcCCCcCccceEEcHH
Confidence 6777776544444677765
No 54
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=98.72 E-value=1.9e-08 Score=72.26 Aligned_cols=87 Identities=14% Similarity=0.151 Sum_probs=61.9
Q ss_pred CcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC-CcccCh-HHHHhcCcEEEeEeeceeeeeechhh--------H
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH-DMTVPL-TPAAARYLIYGFLFFFFLVLGYSVIY--------F 72 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~-~~~i~~-~~l~~k~~~i~Gs~~~~g~~~~~~~~--------~ 72 (100)
+++|++|||+|.+ ++++++++++++|+++.+|.... ..++++ ..++.|++++.|++. +. ...++ .
T Consensus 230 ~~~d~vi~~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~--~~--~~~~~~~~~~~~~~ 304 (354)
T 2j8z_A 230 AGVNLILDCIGGS-YWEKNVNCLALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLL--RS--RDNKYKQMLVNAFT 304 (354)
T ss_dssp SCEEEEEESSCGG-GHHHHHHHEEEEEEEEECCCTTCSCCCSCHHHHHHHTTCEEEECCS--TT--CCHHHHHHHHHHHH
T ss_pred CCceEEEECCCch-HHHHHHHhccCCCEEEEEeccCCCccCCChhHHHHhCCCEEEEEEc--cc--ccccccHHHHHHHH
Confidence 4799999999986 89999999999999999998764 356787 788899999996432 11 11111 1
Q ss_pred -HHHHHHhcC---CCcceeeeeceee
Q 034260 73 -RKMLYISGQ---TPKLIQATLFDLF 94 (100)
Q Consensus 73 -~~i~~l~~~---~~~~i~~~~~~~~ 94 (100)
+.+.+++++ ..+.+.+..++|+
T Consensus 305 ~~~~~l~~~g~~~~l~~~i~~~~~l~ 330 (354)
T 2j8z_A 305 EQILPHFSTEGPQRLLPVLDRIYPVT 330 (354)
T ss_dssp HHTGGGGTC---CCCCCCEEEEEEGG
T ss_pred HHHHHHHHcCCCccccCccceEEcHH
Confidence 234566666 5555555777765
No 55
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=98.72 E-value=9.3e-09 Score=73.52 Aligned_cols=88 Identities=11% Similarity=0.017 Sum_probs=56.9
Q ss_pred CcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCC-cccChHHHHhcCcEEEeEeeceeeee--ec---hhhH-HHH
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHD-MTVPLTPAAARYLIYGFLFFFFLVLG--YS---VIYF-RKM 75 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~-~~i~~~~l~~k~~~i~Gs~~~~g~~~--~~---~~~~-~~i 75 (100)
+|+|++|||+|.+ .+++++++++++|+++++|....+ .+++...++.|++++.|+.+ +.+. .+ .+++ +.+
T Consensus 226 ~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~--~~~~~~~~~~~~~~~~~~~ 302 (342)
T 4eye_A 226 AGVDMVVDPIGGP-AFDDAVRTLASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAW--GEFLRTHADYLYETQAGLE 302 (342)
T ss_dssp SCEEEEEESCC---CHHHHHHTEEEEEEEEEC----------CCCCGGGTTCEEEECCH--HHHHHHCTTHHHHHHHHHH
T ss_pred CCceEEEECCchh-HHHHHHHhhcCCCEEEEEEccCCCCCccCHHHHhhcCCEEEEEeh--hhhhhcCHHHHHHHHHHHH
Confidence 4899999999984 899999999999999999987653 46777778899999997442 1110 00 1223 445
Q ss_pred HHHhcCCCcceeeeeceee
Q 034260 76 LYISGQTPKLIQATLFDLF 94 (100)
Q Consensus 76 ~~l~~~~~~~i~~~~~~~~ 94 (100)
.+++++ .+.+.+.+++|+
T Consensus 303 ~l~~~g-l~~~i~~~~~l~ 320 (342)
T 4eye_A 303 KLVAEG-MRPPVSARIPLS 320 (342)
T ss_dssp HHHHTT-CCCCEEEEEEGG
T ss_pred HHHHcC-CCCCcceEEeHH
Confidence 677777 555555777775
No 56
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=98.71 E-value=8.1e-09 Score=72.49 Aligned_cols=88 Identities=14% Similarity=0.174 Sum_probs=60.0
Q ss_pred CcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCC-cccChHHHHhcCcEEEeEeeceeeeeechhhH-HHHH---H
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHD-MTVPLTPAAARYLIYGFLFFFFLVLGYSVIYF-RKML---Y 77 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~-~~i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~~-~~i~---~ 77 (100)
+++|++|| +|. .++++++++++++|+++.+|..... .++++..++.|++++.|+.+ +.+...++++ +.+. +
T Consensus 188 ~~~d~vid-~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~l 263 (302)
T 1iz0_A 188 GGLDLVLE-VRG-KEVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWL--TPLLREGALVEEALGFLLP 263 (302)
T ss_dssp TSEEEEEE-CSC-TTHHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCH--HHHTTCHHHHHHHHHHHGG
T ss_pred cCceEEEE-CCH-HHHHHHHHhhccCCEEEEEeCCCCCCCCcCHHHHHhCCCeEEEEec--cchhhhHHHHHHHHhhhHH
Confidence 37999999 998 6899999999999999999987653 35777788899999996432 1111223444 5566 7
Q ss_pred HhcCCCcceeeeeceee
Q 034260 78 ISGQTPKLIQATLFDLF 94 (100)
Q Consensus 78 l~~~~~~~i~~~~~~~~ 94 (100)
+.++..+.+.++.++|+
T Consensus 264 ~~~g~l~~~i~~~~~l~ 280 (302)
T 1iz0_A 264 RLGRELRPVVGPVFPFA 280 (302)
T ss_dssp GBTTTBCCCEEEEEEGG
T ss_pred HHcCCcccccceEEcHH
Confidence 77776555555777775
No 57
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=98.70 E-value=6.7e-09 Score=73.57 Aligned_cols=55 Identities=22% Similarity=0.259 Sum_probs=47.7
Q ss_pred CcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC-CcccChHHHHhcCcEEEeE
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH-DMTVPLTPAAARYLIYGFL 58 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~-~~~i~~~~l~~k~~~i~Gs 58 (100)
+++|++|||+|. +++++++++++++|+++++|.... +.++++..++.|++++.|+
T Consensus 215 ~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~ 270 (328)
T 1xa0_A 215 QRWAAAVDPVGG-RTLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGI 270 (328)
T ss_dssp CCEEEEEECSTT-TTHHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEEC
T ss_pred CcccEEEECCcH-HHHHHHHHhhccCCEEEEEeecCCCCCCCchhhhhhcCceEEEE
Confidence 479999999998 589999999999999999998764 4567777888999999964
No 58
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=98.68 E-value=4.4e-08 Score=70.36 Aligned_cols=87 Identities=15% Similarity=0.071 Sum_probs=61.1
Q ss_pred CcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccChHHHHhcCcEEEeEeeceeeeeechhhH-HHHH----H
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPLTPAAARYLIYGFLFFFFLVLGYSVIYF-RKML----Y 77 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~~-~~i~----~ 77 (100)
+++|++|||+|.+ ++++++++++++|+++.+|.. .+.++++..++.|++++.|+.. ...+++++ +.+. +
T Consensus 238 ~~~D~vi~~~G~~-~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~~~~~~i~g~~~----~~~~~~~~~~~~~~l~~~ 311 (351)
T 1yb5_A 238 KGIDIIIEMLANV-NLSKDLSLLSHGGRVIVVGSR-GTIEINPRDTMAKESSIIGVTL----FSSTKEEFQQYAAALQAG 311 (351)
T ss_dssp TCEEEEEESCHHH-HHHHHHHHEEEEEEEEECCCC-SCEEECTHHHHTTTCEEEECCG----GGCCHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCChH-HHHHHHHhccCCCEEEEEecC-CCCccCHHHHHhCCcEEEEEEe----ecCCHHHHHHHHHHHHHH
Confidence 4799999999974 789999999999999999965 3456778888899999996431 12233333 3222 4
Q ss_pred HhcCCCcceeeeeceeee
Q 034260 78 ISGQTPKLIQATLFDLFF 95 (100)
Q Consensus 78 l~~~~~~~i~~~~~~~~~ 95 (100)
+.++..+.+.+..+||+-
T Consensus 312 ~~~g~l~~~i~~~~~l~~ 329 (351)
T 1yb5_A 312 MEIGWLKPVIGSQYPLEK 329 (351)
T ss_dssp HHHTCCCCCEEEEEEGGG
T ss_pred HHCCCccCccceEEcHHH
Confidence 445544444556777753
No 59
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=98.66 E-value=4.2e-08 Score=69.43 Aligned_cols=89 Identities=16% Similarity=0.048 Sum_probs=63.9
Q ss_pred CcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCC-cccChHHHHhc-CcEEEeEeeceeeeeec----hhhH-HHH
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHD-MTVPLTPAAAR-YLIYGFLFFFFLVLGYS----VIYF-RKM 75 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~-~~i~~~~l~~k-~~~i~Gs~~~~g~~~~~----~~~~-~~i 75 (100)
+++|++|||+| ..++++++++++++|+++.+|....+ .+++...++.| ++++.++.. +++... .+++ +.+
T Consensus 208 ~~~D~vi~~~g-~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 284 (327)
T 1qor_A 208 KKVRVVYDSVG-RDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSL--QGYITTREELTEASNELF 284 (327)
T ss_dssp CCEEEEEECSC-GGGHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCH--HHHCCSHHHHHHHHHHHH
T ss_pred CCceEEEECCc-hHHHHHHHHHhcCCCEEEEEecCCCCCCccCHHHHhhccceEEEccch--hhhcCCHHHHHHHHHHHH
Confidence 47999999999 67899999999999999999987653 46788888888 888875221 111111 2233 456
Q ss_pred HHHhcCCCcceee--eeceee
Q 034260 76 LYISGQTPKLIQA--TLFDLF 94 (100)
Q Consensus 76 ~~l~~~~~~~i~~--~~~~~~ 94 (100)
.++.++..+.+.+ +.++|+
T Consensus 285 ~l~~~g~l~~~i~~~~~~~l~ 305 (327)
T 1qor_A 285 SLIASGVIKVDVAEQQKYPLK 305 (327)
T ss_dssp HHHHTTSSCCCCCGGGEEEGG
T ss_pred HHHHCCCcccccccCcEEcHH
Confidence 7788876555555 677765
No 60
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=98.65 E-value=2.4e-08 Score=70.62 Aligned_cols=85 Identities=12% Similarity=0.026 Sum_probs=61.3
Q ss_pred CcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccChHHHHhcCcEEEeEeeceeeeeechhhH-HHHHHHhcC
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPLTPAAARYLIYGFLFFFFLVLGYSVIYF-RKMLYISGQ 81 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~~-~~i~~l~~~ 81 (100)
+++|++|||+|.+.. ++++++++++|+++.+|....+. ....+..+++++.|++ .....+++ +.+.+++++
T Consensus 214 ~g~D~v~d~~g~~~~-~~~~~~l~~~G~iv~~g~~~~~~--~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~g 285 (321)
T 3tqh_A 214 TPVDAVIDLVGGDVG-IQSIDCLKETGCIVSVPTITAGR--VIEVAKQKHRRAFGLL-----KQFNIEELHYLGKLVSED 285 (321)
T ss_dssp SCEEEEEESSCHHHH-HHHGGGEEEEEEEEECCSTTHHH--HHHHHHHTTCEEECCC-----CCCCHHHHHHHHHHHHTT
T ss_pred cCCCEEEECCCcHHH-HHHHHhccCCCEEEEeCCCCchh--hhhhhhhcceEEEEEe-----cCCCHHHHHHHHHHHHCC
Confidence 379999999998755 99999999999999998654322 2335678899998522 22334455 556788888
Q ss_pred CCcceeeeeceeee
Q 034260 82 TPKLIQATLFDLFF 95 (100)
Q Consensus 82 ~~~~i~~~~~~~~~ 95 (100)
..+...+++++|+.
T Consensus 286 ~l~~~i~~~~~l~~ 299 (321)
T 3tqh_A 286 KLRIEISRIFQLSE 299 (321)
T ss_dssp SSCCCEEEEECGGG
T ss_pred CcccccccEEcHHH
Confidence 76666667777753
No 61
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=98.52 E-value=2.1e-07 Score=66.61 Aligned_cols=88 Identities=18% Similarity=0.191 Sum_probs=58.8
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC-CcccCh---------HHHHhcCcEEEeEeeceeeeee-chhhH
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH-DMTVPL---------TPAAARYLIYGFLFFFFLVLGY-SVIYF 72 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~-~~~i~~---------~~l~~k~~~i~Gs~~~~g~~~~-~~~~~ 72 (100)
++|++|||+|. .++++++++++++||++++|.... ..+++. ..++.|++++.|++. +.+.. ..+++
T Consensus 230 ~~d~vi~~~G~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~--~~~~~~~~~~~ 306 (357)
T 2zb4_A 230 GVDVYFDNVGG-NISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLV--LNYKDKFEPGI 306 (357)
T ss_dssp CEEEEEESCCH-HHHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHHTCEEEECCG--GGGGGGHHHHH
T ss_pred CCCEEEECCCH-HHHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhhhhcceeEEEEeeh--hhhhHHHHHHH
Confidence 79999999997 789999999999999999998653 123332 567889999996432 11110 13334
Q ss_pred -HHHHHHhcCCCcceeeeeceee
Q 034260 73 -RKMLYISGQTPKLIQATLFDLF 94 (100)
Q Consensus 73 -~~i~~l~~~~~~~i~~~~~~~~ 94 (100)
+.+.++.++..+......++|+
T Consensus 307 ~~~~~l~~~g~l~~~~~~~~~l~ 329 (357)
T 2zb4_A 307 LQLSQWFKEGKLKIKETVINGLE 329 (357)
T ss_dssp HHHHHHHHTTCCCCCEEEEECGG
T ss_pred HHHHHHHHcCCCcCccceecCHH
Confidence 5567787775443332335554
No 62
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=98.50 E-value=1.4e-07 Score=67.96 Aligned_cols=80 Identities=11% Similarity=0.056 Sum_probs=55.4
Q ss_pred CCcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCc-----------ccChHHHHhcCcEEEeEeeceeeee-ech
Q 034260 2 GAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDM-----------TVPLTPAAARYLIYGFLFFFFLVLG-YSV 69 (100)
Q Consensus 2 G~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~-----------~i~~~~l~~k~~~i~Gs~~~~g~~~-~~~ 69 (100)
++|+|++|||+|. .++++++++++++|+++.+|...... .+ ...++.|++++.|++. +.+. ...
T Consensus 229 ~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~g~~~--~~~~~~~~ 304 (362)
T 2c0c_A 229 PEGVDVVYESVGG-AMFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTL-PAKLLKKSASVQGFFL--NHYLSKYQ 304 (362)
T ss_dssp TTCEEEEEECSCT-HHHHHHHHHEEEEEEEEECCCGGGTTSSSCCCCCCCTTH-HHHHHHHTCEEEECCG--GGCGGGHH
T ss_pred CCCCCEEEECCCH-HHHHHHHHHHhcCCEEEEEeCCCCcCccccccccccccc-HHHHHhhcceEEEEEh--hhhhhhHH
Confidence 3579999999998 68999999999999999999764311 22 2567889999996432 1111 012
Q ss_pred hhH-HHHHHHhcCCCcc
Q 034260 70 IYF-RKMLYISGQTPKL 85 (100)
Q Consensus 70 ~~~-~~i~~l~~~~~~~ 85 (100)
+++ +.+.+++++..+.
T Consensus 305 ~~~~~~~~l~~~g~l~~ 321 (362)
T 2c0c_A 305 AAMSHLLEMCVSGDLVC 321 (362)
T ss_dssp HHHHHHHHHHHTTCSCC
T ss_pred HHHHHHHHHHHCCCeEe
Confidence 344 5567888775443
No 63
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=98.49 E-value=4.7e-07 Score=64.12 Aligned_cols=80 Identities=15% Similarity=0.070 Sum_probs=55.4
Q ss_pred CcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC------Cc-ccChHHHHhcCcEEEeEeeceeeee--echhhH-
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH------DM-TVPLTPAAARYLIYGFLFFFFLVLG--YSVIYF- 72 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~------~~-~i~~~~l~~k~~~i~Gs~~~~g~~~--~~~~~~- 72 (100)
+++|+++||+|. .++++++++++++|+++++|.... +. ..+...++.|++++.|++. +.+. ...+++
T Consensus 213 ~~~d~vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~--~~~~~~~~~~~~~ 289 (333)
T 1v3u_A 213 DGYDCYFDNVGG-EFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIV--YRWQGDVREKALR 289 (333)
T ss_dssp TCEEEEEESSCH-HHHHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCG--GGCCTHHHHHHHH
T ss_pred CCCeEEEECCCh-HHHHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEeh--hhcchHHHHHHHH
Confidence 379999999998 579999999999999999998653 21 2366778899999996432 1110 002233
Q ss_pred HHHHHHhcCCCcc
Q 034260 73 RKMLYISGQTPKL 85 (100)
Q Consensus 73 ~~i~~l~~~~~~~ 85 (100)
+.+.+++++..+.
T Consensus 290 ~~~~l~~~g~l~~ 302 (333)
T 1v3u_A 290 DLMKWVLEGKIQY 302 (333)
T ss_dssp HHHHHHHTTSSCC
T ss_pred HHHHHHHCCCccC
Confidence 4466777775443
No 64
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=98.40 E-value=1.8e-08 Score=71.09 Aligned_cols=88 Identities=10% Similarity=0.035 Sum_probs=46.2
Q ss_pred CCcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccChHHHHhcCcEEEeEeeceeeee-echh-------hH-
Q 034260 2 GAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPLTPAAARYLIYGFLFFFFLVLG-YSVI-------YF- 72 (100)
Q Consensus 2 G~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~~~l~~k~~~i~Gs~~~~g~~~-~~~~-------~~- 72 (100)
++|+|++|||+|.+. .++++++++++||++.+|......+++ ...+.+++++... .|++. .++. ++
T Consensus 197 ~~g~Dvv~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 271 (315)
T 3goh_A 197 TQKYFAIFDAVNSQN-AAALVPSLKANGHIICIQDRIPAPIDP---AFTRTISYHEIAL-GALHDFGDRQDWQILMQQGE 271 (315)
T ss_dssp CSCEEEEECC--------TTGGGEEEEEEEEEECCC-------------CCSEEEEECG-GGHHHHCCHHHHHHHHHHHH
T ss_pred CCCccEEEECCCchh-HHHHHHHhcCCCEEEEEeCCCCccccc---hhhhcceeeEEEe-ecccccCChhHHHHHHHHHH
Confidence 568999999999864 589999999999999998654332222 2233444432111 02222 1111 22
Q ss_pred HHHHHHhcCCCcceeeeeceee
Q 034260 73 RKMLYISGQTPKLIQATLFDLF 94 (100)
Q Consensus 73 ~~i~~l~~~~~~~i~~~~~~~~ 94 (100)
+.+.+++++..+.+.+.++||+
T Consensus 272 ~~~~l~~~g~l~~~i~~~~~l~ 293 (315)
T 3goh_A 272 ALLTLIAQGKMEIAAPDIFRFE 293 (315)
T ss_dssp HHHHHHHTTSSCCCCCEEEEGG
T ss_pred HHHHHHHCCCcccccceEecHH
Confidence 4456788876555666778875
No 65
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=98.34 E-value=5.1e-07 Score=65.16 Aligned_cols=56 Identities=13% Similarity=0.055 Sum_probs=44.1
Q ss_pred CcccEEEEccChHHHHHHHHHhc-cCCCEEEEecCCCC------CcccC---hHHHHhcCcEEEeE
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDAT-RAGDKVCLVGMGHH------DMTVP---LTPAAARYLIYGFL 58 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l-~~gGrvv~vG~~~~------~~~i~---~~~l~~k~~~i~Gs 58 (100)
+++|++|||+|.+.+++++++++ +++||++.+|.... +.+.+ ...++.|++++.|+
T Consensus 230 g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~ 295 (371)
T 3gqv_A 230 NNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAP 295 (371)
T ss_dssp TCCCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSCSTT
T ss_pred CCccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeecccccccccc
Confidence 45999999999989999999999 69999999996542 12222 23577899999864
No 66
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=98.23 E-value=1.7e-07 Score=66.78 Aligned_cols=91 Identities=11% Similarity=0.092 Sum_probs=55.2
Q ss_pred CCcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccChHHHHh-cCcEEEeEeec----eeeeeechhhH-HHH
Q 034260 2 GAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPLTPAAA-RYLIYGFLFFF----FLVLGYSVIYF-RKM 75 (100)
Q Consensus 2 G~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~~~l~~-k~~~i~Gs~~~----~g~~~~~~~~~-~~i 75 (100)
|+|+|++|||+|.+. ..+++++++++|+++.+|.... .+++...+.. +.+++.+.... .++.....+++ +.+
T Consensus 211 ~~g~Dvvid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (340)
T 3gms_A 211 GIGADAAIDSIGGPD-GNELAFSLRPNGHFLTIGLLSG-IQVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLI 288 (340)
T ss_dssp TSCEEEEEESSCHHH-HHHHHHTEEEEEEEEECCCTTS-CCCCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHHHHHHH
T ss_pred CCCCcEEEECCCChh-HHHHHHHhcCCCEEEEEeecCC-CCCCHHHhhhcccceEEEEEehhhhhhcCHHHHHHHHHHHH
Confidence 358999999999865 4566799999999999998764 2455555443 34444421100 00111112334 556
Q ss_pred HHHhcCCCc--ceeeeeceeee
Q 034260 76 LYISGQTPK--LIQATLFDLFF 95 (100)
Q Consensus 76 ~~l~~~~~~--~i~~~~~~~~~ 95 (100)
.+++++..+ .| ++.++|+-
T Consensus 289 ~l~~~g~l~~~~i-~~~~~l~~ 309 (340)
T 3gms_A 289 RLVENEQLRFMKV-HSTYELAD 309 (340)
T ss_dssp HHHHTTSSCCCCE-EEEEEGGG
T ss_pred HHHHcCCCccccc-cEEEeHHH
Confidence 788887543 35 46777753
No 67
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=98.15 E-value=2.4e-06 Score=56.19 Aligned_cols=53 Identities=17% Similarity=0.268 Sum_probs=42.1
Q ss_pred CcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC--CcccChHHHHhcCcEEEe
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH--DMTVPLTPAAARYLIYGF 57 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~--~~~i~~~~l~~k~~~i~G 57 (100)
+++|+++||+|. ..+++++++++++|+++.+|.... +.++++. .+.|++++.+
T Consensus 106 ~~~D~vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~ 160 (198)
T 1pqw_A 106 YGVDVVLNSLAG-EAIQRGVQILAPGGRFIELGKKDVYADASLGLA-ALAKSASFSV 160 (198)
T ss_dssp CCEEEEEECCCT-HHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGG-GGTTTCEEEE
T ss_pred CCCeEEEECCch-HHHHHHHHHhccCCEEEEEcCCCCcCcCcCChh-HhcCCcEEEE
Confidence 479999999995 689999999999999999998652 2335443 3468899884
No 68
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=98.09 E-value=2.4e-06 Score=67.53 Aligned_cols=89 Identities=16% Similarity=0.146 Sum_probs=56.9
Q ss_pred CCcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccChHHHHhcCcEEEeEeeceeeeee--chhhH-HHHHHH
Q 034260 2 GAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPLTPAAARYLIYGFLFFFFLVLGY--SVIYF-RKMLYI 78 (100)
Q Consensus 2 G~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~~~l~~k~~~i~Gs~~~~g~~~~--~~~~~-~~i~~l 78 (100)
|+|+|+||||+|. +.+++++++++++||++.+|........... ...+++++.+... ..... ..+.+ +.+.++
T Consensus 410 g~GvDvVld~~gg-~~~~~~l~~l~~~Gr~v~iG~~~~~~~~~~~-~~~~~~~~~~~~l--~~~~~~~~~~~l~~~~~l~ 485 (795)
T 3slk_A 410 GRGVDVVLNSLAG-EFADASLRMLPRGGRFLELGKTDVRDPVEVA-DAHPGVSYQAFDT--VEAGPQRIGEMLHELVELF 485 (795)
T ss_dssp SSCCSEEEECCCT-TTTHHHHTSCTTCEEEEECCSTTCCCHHHHH-HHSSSEEEEECCG--GGGHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCc-HHHHHHHHHhcCCCEEEEeccccccCccccc-ccCCCCEEEEeec--cccCHHHHHHHHHHHHHHH
Confidence 5689999999997 5789999999999999999976543222222 2246677663211 00000 11233 445677
Q ss_pred hcCCCcceeeeeceee
Q 034260 79 SGQTPKLIQATLFDLF 94 (100)
Q Consensus 79 ~~~~~~~i~~~~~~~~ 94 (100)
+++..+.+..+.||++
T Consensus 486 ~~g~l~p~~~~~~~l~ 501 (795)
T 3slk_A 486 EGRVLEPLPVTAWDVR 501 (795)
T ss_dssp HTTSCCCCCEEEEEGG
T ss_pred HcCCcCCCcceeEcHH
Confidence 7776555566777765
No 69
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=97.98 E-value=5.9e-06 Score=59.51 Aligned_cols=88 Identities=10% Similarity=0.028 Sum_probs=55.8
Q ss_pred CcccEEEEccChH-HHHHHHHHhccCCCEEEEecCCCCC-c-c--cCh------HHHHh-------cCcEEEeEeeceee
Q 034260 3 AGIDVSFDCAGLN-KTMSTVLDATRAGDKVCLVGMGHHD-M-T--VPL------TPAAA-------RYLIYGFLFFFFLV 64 (100)
Q Consensus 3 ~G~D~vie~~G~~-~~~~~al~~l~~gGrvv~vG~~~~~-~-~--i~~------~~l~~-------k~~~i~Gs~~~~g~ 64 (100)
.|+|++|||+|.+ .++++++++++++|+++.+|..... . . ++. ..++. ++..+.+ ..
T Consensus 247 ~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-----~~ 321 (375)
T 2vn8_A 247 KPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRW-----AF 321 (375)
T ss_dssp CCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEE-----CC
T ss_pred CCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhheeehhhccccccccccCcceEE-----EE
Confidence 3799999999997 6789999999999999999976431 1 0 111 11222 4445542 11
Q ss_pred eeechhhH-HHHHHHhcCCCcceeeeeceeee
Q 034260 65 LGYSVIYF-RKMLYISGQTPKLIQATLFDLFF 95 (100)
Q Consensus 65 ~~~~~~~~-~~i~~l~~~~~~~i~~~~~~~~~ 95 (100)
.....+++ +.+.+++++..+.+.+..+||+-
T Consensus 322 ~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~ 353 (375)
T 2vn8_A 322 FMASGPCLDDIAELVDAGKIRPVIEQTFPFSK 353 (375)
T ss_dssp CCCCHHHHHHHHHHHHTTSCCCCEEEEEEGGG
T ss_pred eCCCHHHHHHHHHHHHCCCcccCcCeEECHHH
Confidence 12223444 55678888765555557788753
No 70
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=97.76 E-value=2.9e-06 Score=61.39 Aligned_cols=56 Identities=18% Similarity=0.189 Sum_probs=39.2
Q ss_pred CcccEEEEccChHHHHHHHHHhcc-----CC-----------CEEEEecCCCCCcccChHHHHhcCcEEEeEe
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATR-----AG-----------DKVCLVGMGHHDMTVPLTPAAARYLIYGFLF 59 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~-----~g-----------Grvv~vG~~~~~~~i~~~~l~~k~~~i~Gs~ 59 (100)
+|+|++|||+|.+.+.++++++++ ++ |+++++|.... .++++..++.+++++.|++
T Consensus 239 ~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~~-~~~~~~~~~~~~~~i~g~~ 310 (379)
T 3iup_A 239 TGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDT-SPTEFNRNFGMAWGMGGWL 310 (379)
T ss_dssp HCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSEE-EEEEECCCSCSCEEEEECC
T ss_pred CCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCCCC-CccccccccccceEEEEEE
Confidence 479999999999878888888885 55 55555554331 2344455678899999644
No 71
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.48 E-value=8.4e-05 Score=64.77 Aligned_cols=57 Identities=7% Similarity=0.131 Sum_probs=43.4
Q ss_pred CCcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCC-cccChHHHHhcCcEEEeEe
Q 034260 2 GAGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHD-MTVPLTPAAARYLIYGFLF 59 (100)
Q Consensus 2 G~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~-~~i~~~~l~~k~~~i~Gs~ 59 (100)
|+|+|+|+||+| .+.+++++++++++||++.+|..... .......+..+++++.|+.
T Consensus 1738 g~GvDvVld~~g-~~~l~~~l~~L~~~Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~ 1795 (2512)
T 2vz8_A 1738 GKGVDLVLNSLA-EEKLQASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHGIL 1795 (2512)
T ss_dssp SCCEEEEEECCC-HHHHHHHHTTEEEEEEEEECCCHHHHTTCEEEGGGGGGCCEEEECC
T ss_pred CCCceEEEECCC-chHHHHHHHhcCCCcEEEEeecccccccCcccccccccCCcEEEee
Confidence 468999999998 57899999999999999999965321 1112234667899998643
No 72
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=96.48 E-value=0.001 Score=47.87 Aligned_cols=54 Identities=7% Similarity=0.013 Sum_probs=43.0
Q ss_pred cccEEEEccChHHH------HHHHHHhccCCCEEEEecCCCC-------CcccChHHHHhcCcEEEe
Q 034260 4 GIDVSFDCAGLNKT------MSTVLDATRAGDKVCLVGMGHH-------DMTVPLTPAAARYLIYGF 57 (100)
Q Consensus 4 G~D~vie~~G~~~~------~~~al~~l~~gGrvv~vG~~~~-------~~~i~~~~l~~k~~~i~G 57 (100)
++|++|+|+|.+.. .+++++.++++|+++.+|...+ +.+++...+..+++++.|
T Consensus 230 ~~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~ 296 (361)
T 1pjc_A 230 EADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYG 296 (361)
T ss_dssp TCSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEEC
T ss_pred CCCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEE
Confidence 58999999998653 6788999999999999997653 345666667778899885
No 73
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=96.34 E-value=0.001 Score=47.98 Aligned_cols=54 Identities=9% Similarity=-0.002 Sum_probs=33.2
Q ss_pred cccEEEEccChHHH------HHHHHHhccCCCEEEEecCCCC-------CcccChHHHHhcCcEEEe
Q 034260 4 GIDVSFDCAGLNKT------MSTVLDATRAGDKVCLVGMGHH-------DMTVPLTPAAARYLIYGF 57 (100)
Q Consensus 4 G~D~vie~~G~~~~------~~~al~~l~~gGrvv~vG~~~~-------~~~i~~~~l~~k~~~i~G 57 (100)
++|++++|+|.+.. .+++++.++++|+++.+|...+ +.+++...+..+++++.|
T Consensus 229 ~~DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~ 295 (369)
T 2eez_A 229 HADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYG 295 (369)
T ss_dssp HCSEEEECCC-------CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEEC
T ss_pred CCCEEEECCCCCccccchhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEe
Confidence 58999999998653 6888999999999999997653 334454455667888775
No 74
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=96.04 E-value=0.002 Score=46.73 Aligned_cols=72 Identities=7% Similarity=-0.015 Sum_probs=48.6
Q ss_pred cccEEEEcc---ChHH--H-HHHHHHhccCCCEEEEecCCC-CCc--ccChHHHHhcCcEEEeEeeceeeeeechhhHH-
Q 034260 4 GIDVSFDCA---GLNK--T-MSTVLDATRAGDKVCLVGMGH-HDM--TVPLTPAAARYLIYGFLFFFFLVLGYSVIYFR- 73 (100)
Q Consensus 4 G~D~vie~~---G~~~--~-~~~al~~l~~gGrvv~vG~~~-~~~--~i~~~~l~~k~~~i~Gs~~~~g~~~~~~~~~~- 73 (100)
++|++|+|+ |.+. . .+++++.++++++++-+|... +.+ +.+...+..+++++.| +.+.+...++
T Consensus 257 ~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g------~~~~p~~~~~~ 330 (384)
T 1l7d_A 257 KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVG------HTNVPSRVAAD 330 (384)
T ss_dssp TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTCCTTCEEEETTEEEEC------CSSGGGGGHHH
T ss_pred CCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeecccCCcEEEECCEEEEE------eCCCcchhHHH
Confidence 689999999 6422 2 378899999999999999753 232 2344456678999984 5455444443
Q ss_pred HHHHHhcC
Q 034260 74 KMLYISGQ 81 (100)
Q Consensus 74 ~i~~l~~~ 81 (100)
++.+++++
T Consensus 331 a~~l~~~~ 338 (384)
T 1l7d_A 331 ASPLFAKN 338 (384)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 55666554
No 75
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=95.32 E-value=0.0081 Score=43.98 Aligned_cols=71 Identities=8% Similarity=-0.002 Sum_probs=45.6
Q ss_pred cccEEEEccChH-----HHH-HHHHHhccCCCEEEEecCCC-CCcccCh--H-HHHhcCcEEEeEeeceeeeeechhhHH
Q 034260 4 GIDVSFDCAGLN-----KTM-STVLDATRAGDKVCLVGMGH-HDMTVPL--T-PAAARYLIYGFLFFFFLVLGYSVIYFR 73 (100)
Q Consensus 4 G~D~vie~~G~~-----~~~-~~al~~l~~gGrvv~vG~~~-~~~~i~~--~-~l~~k~~~i~Gs~~~~g~~~~~~~~~~ 73 (100)
++|++|+|++.+ ..+ +++++.++++|+++-+|... +.++.+. . .+..+++++.| +.+.+....+
T Consensus 255 ~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~~~~~~p~~~~~gv~i~g------~~~~p~~~~~ 328 (401)
T 1x13_A 255 EVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIG------YTDLPGRLPT 328 (401)
T ss_dssp HCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTSEEECTTSCEEEC------CSCTGGGSHH
T ss_pred CCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCcccCCCceEEECCEEEEe------eCCCcccCHH
Confidence 589999997443 223 68999999999999999753 3343322 2 25678999995 4444334433
Q ss_pred -HHHHHhc
Q 034260 74 -KMLYISG 80 (100)
Q Consensus 74 -~i~~l~~ 80 (100)
++.++++
T Consensus 329 ~a~~ll~~ 336 (401)
T 1x13_A 329 QSSQLYGT 336 (401)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 4444443
No 76
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=95.31 E-value=0.0064 Score=44.04 Aligned_cols=55 Identities=7% Similarity=0.105 Sum_probs=41.9
Q ss_pred cccEEEEccChHHH------HHHHHHhccCCCEEEEecCCC-------CCcccChHHHHhcCcEEEeE
Q 034260 4 GIDVSFDCAGLNKT------MSTVLDATRAGDKVCLVGMGH-------HDMTVPLTPAAARYLIYGFL 58 (100)
Q Consensus 4 G~D~vie~~G~~~~------~~~al~~l~~gGrvv~vG~~~-------~~~~i~~~~l~~k~~~i~Gs 58 (100)
++|++++|++.+.+ .++.++.++++|+++.+|... .+.+++...+..+++++.++
T Consensus 231 ~aDvVi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va~~~Ggv~e~~ep~~~~~~~~~~~~v~i~~~ 298 (377)
T 2vhw_A 231 RADLVIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIAIDQGGCFEGSRPTTYDHPTFAVHDTLFYCV 298 (377)
T ss_dssp HCSEEEECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGGGGTTCSBTTCCCBCSSSCEEEETTEEEECB
T ss_pred CCCEEEECCCcCCCCCcceecHHHHhcCCCCcEEEEEecCCCCccccccCCCCCCCEEEECCEEEEec
Confidence 58999999998765 688999999999999999643 24445555556678887743
No 77
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=95.18 E-value=0.011 Score=44.56 Aligned_cols=52 Identities=8% Similarity=0.006 Sum_probs=41.5
Q ss_pred cccEEEEccChHHHHH-HHHHhccCCCEEEEecCCCCCcccChHHHHhcCc---EEEe
Q 034260 4 GIDVSFDCAGLNKTMS-TVLDATRAGDKVCLVGMGHHDMTVPLTPAAARYL---IYGF 57 (100)
Q Consensus 4 G~D~vie~~G~~~~~~-~al~~l~~gGrvv~vG~~~~~~~i~~~~l~~k~~---~i~G 57 (100)
++|++++|+|....+. +.++.++++|+++.+|... .+++...+..+++ +|.+
T Consensus 329 ~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~--~eId~~aL~~~aL~~~~I~~ 384 (494)
T 3ce6_A 329 DADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFD--NEIDMAGLERSGATRVNVKP 384 (494)
T ss_dssp GCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSSG--GGBCHHHHHHTTCEEEEEET
T ss_pred CCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCC--CccCHHHHHHhhhccceEEE
Confidence 6899999999887676 8999999999999999865 3567777766555 5654
No 78
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=93.04 E-value=0.12 Score=34.18 Aligned_cols=34 Identities=12% Similarity=0.011 Sum_probs=29.8
Q ss_pred CcccEEEEccChH-HHHHHHHHhccCCCEEEEecC
Q 034260 3 AGIDVSFDCAGLN-KTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 3 ~G~D~vie~~G~~-~~~~~al~~l~~gGrvv~vG~ 36 (100)
.++|+|+...+.+ ..++++.+++++||+++++-.
T Consensus 157 ~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 157 GIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp TCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred CcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 3689999988877 789999999999999998764
No 79
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=91.15 E-value=0.14 Score=36.88 Aligned_cols=38 Identities=21% Similarity=0.376 Sum_probs=32.0
Q ss_pred CcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCC
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHD 40 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~ 40 (100)
.|+|+|+||+|.-.+.+.|-..++.|.+-|++..+..+
T Consensus 88 ~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d 125 (332)
T 3pym_A 88 SNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSST 125 (332)
T ss_dssp TTCSEEEECSSSSCSHHHHHHHHHTTCSEEEESSCCSS
T ss_pred cCccEEEEecccccCHHHHHHHHHcCCCEEEECCCCCC
Confidence 38999999999988888899999988888888777543
No 80
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=91.12 E-value=0.12 Score=37.38 Aligned_cols=37 Identities=14% Similarity=0.270 Sum_probs=31.7
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHD 40 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~ 40 (100)
|+|+|+||+|.-.+.+.|-..++.|.+-|++..+..+
T Consensus 93 gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d 129 (337)
T 3v1y_O 93 GAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKD 129 (337)
T ss_dssp TCCEEEECSSSCCSHHHHTHHHHTTCCEEEESSCCSS
T ss_pred CCcEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCC
Confidence 7999999999988888888999989888888777654
No 81
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=90.72 E-value=0.29 Score=34.64 Aligned_cols=35 Identities=9% Similarity=0.050 Sum_probs=28.9
Q ss_pred CcccEEEEccChH---HHHHHHHHhccCCCEEEEecCC
Q 034260 3 AGIDVSFDCAGLN---KTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 3 ~G~D~vie~~G~~---~~~~~al~~l~~gGrvv~vG~~ 37 (100)
..+|+|+.++..+ ..++++.+.++|||++++....
T Consensus 187 ~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 187 LEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp CCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred CCcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 4689999876654 6899999999999999987654
No 82
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=90.71 E-value=0.15 Score=32.43 Aligned_cols=34 Identities=18% Similarity=0.249 Sum_probs=26.3
Q ss_pred cccEEE-----EccChH------------HHHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSF-----DCAGLN------------KTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vi-----e~~G~~------------~~~~~al~~l~~gGrvv~vG~~ 37 (100)
.+|+|+ +++|.. ..++++.+.|+|||++++.-..
T Consensus 97 ~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 97 RADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp CEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 589988 555543 5688899999999999987543
No 83
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=89.43 E-value=0.21 Score=35.65 Aligned_cols=38 Identities=21% Similarity=0.311 Sum_probs=32.4
Q ss_pred CcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCC
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHD 40 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~ 40 (100)
.++|+|+||+|.....+.+-++++.|.+.|.+..+.++
T Consensus 90 ~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iSap~~~ 127 (335)
T 1u8f_O 90 AGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSAD 127 (335)
T ss_dssp TTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCSS
T ss_pred CCCCEEEECCCchhhHHHHHHHHhCCCeEEEeccCCCC
Confidence 47899999999988888888889888799999887543
No 84
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=88.17 E-value=0.32 Score=35.22 Aligned_cols=37 Identities=16% Similarity=0.280 Sum_probs=30.3
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHD 40 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~ 40 (100)
|+|+|+||+|...+.+.+-..++.|.+=|++..+..+
T Consensus 94 gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsaps~d 130 (346)
T 3h9e_O 94 GSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSPD 130 (346)
T ss_dssp TSCEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCSS
T ss_pred cccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCC
Confidence 7999999999987888888888888766667766543
No 85
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=88.10 E-value=0.26 Score=35.41 Aligned_cols=35 Identities=29% Similarity=0.413 Sum_probs=29.9
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
++|+||||+|...+.+.+-+.++.|.+-|++..+.
T Consensus 92 ~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~a 126 (339)
T 2x5j_O 92 GVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPG 126 (339)
T ss_dssp TCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCC
T ss_pred CCCEEEECCCccccHHHHHHHHHcCCCEEEEeccc
Confidence 78999999999888888888888888877777665
No 86
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=87.82 E-value=0.24 Score=35.67 Aligned_cols=37 Identities=19% Similarity=0.389 Sum_probs=31.1
Q ss_pred CcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH 39 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~ 39 (100)
.|+|+|+||+|...+.+.|-..++.|.+-|++..+..
T Consensus 90 ~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~ 126 (335)
T 3doc_A 90 ENVDIALECTGIFTSRDKAALHLEAGAKRVIVSAPAD 126 (335)
T ss_dssp TTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCT
T ss_pred cCCCEEEEccCccCCHHHHHHHHHcCCCEEEECCCCC
Confidence 3899999999998888888889988887777776654
No 87
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=87.78 E-value=0.25 Score=35.52 Aligned_cols=36 Identities=22% Similarity=0.265 Sum_probs=31.4
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH 39 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~ 39 (100)
++|+|+||+|...+.+.+-+.++.|.++|.++.+..
T Consensus 91 gvDiV~eatg~~~s~e~a~~~l~~Gak~V~iSap~r 126 (337)
T 1rm4_O 91 GIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGK 126 (337)
T ss_dssp TCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCB
T ss_pred CCCEEEECCCchhhHHHHHHHHHcCCEEEEECCccc
Confidence 689999999998788888888999999999987754
No 88
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=87.54 E-value=0.24 Score=36.05 Aligned_cols=36 Identities=14% Similarity=0.307 Sum_probs=30.6
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH 39 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~ 39 (100)
|+|+|+||+|.-.+.+.|-..++.|.+-|++..+..
T Consensus 103 gvDiVlesTG~f~s~e~A~~hl~aGAkkViISaps~ 138 (359)
T 3ids_C 103 GVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPAS 138 (359)
T ss_dssp TCCEEEECSSSCCBHHHHTHHHHTTCCEEEESSCCB
T ss_pred CccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCC
Confidence 799999999998788888888988888777876654
No 89
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=87.32 E-value=1.2 Score=28.45 Aligned_cols=34 Identities=15% Similarity=0.148 Sum_probs=28.1
Q ss_pred cccEEEEccC---hHHHHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCAG---LNKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~G---~~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
.+|+|+.... ....++++.+.+++||++++....
T Consensus 108 ~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 108 DPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp CCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred CCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEecc
Confidence 5899988765 457889999999999999997654
No 90
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=87.04 E-value=0.31 Score=35.18 Aligned_cols=37 Identities=24% Similarity=0.407 Sum_probs=31.3
Q ss_pred CcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH 39 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~ 39 (100)
.|+|+|+||+|...+.+.|-..++.|.+-|++..+..
T Consensus 90 ~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~ 126 (338)
T 3lvf_P 90 LNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPAT 126 (338)
T ss_dssp TTCSEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCB
T ss_pred cCCCEEEEccCCcCCHHHHHHHHHcCCCEEEECCCCC
Confidence 3799999999998788888899998888788877654
No 91
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=86.15 E-value=0.31 Score=35.16 Aligned_cols=37 Identities=16% Similarity=0.355 Sum_probs=30.1
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHD 40 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~ 40 (100)
|+|+|+||+|...+.+.+-..++.|.+.|++..+.++
T Consensus 89 gvDiV~estG~~~s~e~a~~hl~aGakkVvisaps~d 125 (342)
T 2ep7_A 89 GVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAKN 125 (342)
T ss_dssp TCSEEEECSSSCCBHHHHTTTGGGTCSEEEESSCCBS
T ss_pred CCCEEEECCCchhhhhhhHHHHhcCCCEEEecCCCCC
Confidence 7999999999887788888888888777777766543
No 92
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=85.84 E-value=0.36 Score=35.06 Aligned_cols=35 Identities=6% Similarity=0.116 Sum_probs=26.6
Q ss_pred cccEEEEccChHHHHH--HHHHh-c---cCCCEEEEecCCC
Q 034260 4 GIDVSFDCAGLNKTMS--TVLDA-T---RAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G~~~~~~--~al~~-l---~~gGrvv~vG~~~ 38 (100)
++|+|++|+|.+..+. ..++. + +++|++++++...
T Consensus 227 ~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~ 267 (404)
T 1gpj_A 227 RSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIAN 267 (404)
T ss_dssp TCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCS
T ss_pred CCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccC
Confidence 5899999999765432 55665 3 6788999999875
No 93
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=85.50 E-value=0.68 Score=32.64 Aligned_cols=31 Identities=23% Similarity=0.243 Sum_probs=26.6
Q ss_pred CcccEEEEccChHHHHHHHHHhccC--CCEEEE
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRA--GDKVCL 33 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~--gGrvv~ 33 (100)
.++|+|++|+|.....+.+.++++. |..++.
T Consensus 70 ~~iDvV~~atp~~~h~~~a~~al~a~~Gk~Vi~ 102 (312)
T 1nvm_B 70 ADIDFVFDATSASAHVQNEALLRQAKPGIRLID 102 (312)
T ss_dssp GGEEEEEECSCHHHHHHHHHHHHHHCTTCEEEE
T ss_pred CCCcEEEECCChHHHHHHHHHHHHhCCCCEEEE
Confidence 4689999999988888999999987 777766
No 94
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=85.32 E-value=0.3 Score=35.36 Aligned_cols=37 Identities=16% Similarity=0.273 Sum_probs=31.0
Q ss_pred CcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH 39 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~ 39 (100)
.|+|+|+||+|.-.+.+.|-..++.|.+-|++..+..
T Consensus 90 ~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~ 126 (345)
T 4dib_A 90 LGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAPGK 126 (345)
T ss_dssp TTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCB
T ss_pred cCccEEEEeccCcCCHHHHHHHHHCCCCEEEECCCCC
Confidence 3799999999998788888888988888788877654
No 95
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=84.99 E-value=0.36 Score=35.98 Aligned_cols=38 Identities=21% Similarity=0.514 Sum_probs=31.5
Q ss_pred cccEEEEccChHHHHH-HHHHhccCCCEEEEecCCCCCc
Q 034260 4 GIDVSFDCAGLNKTMS-TVLDATRAGDKVCLVGMGHHDM 41 (100)
Q Consensus 4 G~D~vie~~G~~~~~~-~al~~l~~gGrvv~vG~~~~~~ 41 (100)
.+|+++.|+|....+. +.++.+++++.++-+|.+..++
T Consensus 275 ~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg~~EI 313 (435)
T 3gvp_A 275 QVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNTEI 313 (435)
T ss_dssp TCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSSTTTTB
T ss_pred cCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCCCccC
Confidence 5899999999776675 8899999999999988775443
No 96
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=84.86 E-value=0.36 Score=34.50 Aligned_cols=35 Identities=29% Similarity=0.286 Sum_probs=30.6
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
++|+||||+|...+.+.+-+.++.|.++|.++.+.
T Consensus 88 ~vDvVf~atg~~~s~e~a~~~l~~GakvVdlSa~~ 122 (330)
T 1gad_O 88 GVDVVAEATGLFLTDETARKHITAGAKKVVMTGPS 122 (330)
T ss_dssp TCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred cCCEEEECCCccccHHHHHHHHHCCCEEEEECCCC
Confidence 68999999999878888888888899999988765
No 97
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=84.84 E-value=0.43 Score=34.87 Aligned_cols=36 Identities=22% Similarity=0.281 Sum_probs=30.1
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH 39 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~ 39 (100)
++|+|+||+|...+.+.+-+.++.|.+-|++..+..
T Consensus 91 gvDvV~e~TG~f~s~e~a~~hl~aGakkVVIs~ps~ 126 (380)
T 2d2i_A 91 DIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGK 126 (380)
T ss_dssp TCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCB
T ss_pred CCCEEEECCCccccHHHHHHHHHcCCcEEEEcCCCC
Confidence 789999999988777888888888888777777654
No 98
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=84.79 E-value=1.5 Score=28.42 Aligned_cols=35 Identities=9% Similarity=0.047 Sum_probs=27.4
Q ss_pred cccEEEEccChH-HHHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCAGLN-KTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G~~-~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
.+|+|+...+.. ..++++.+.++|||++++.....
T Consensus 122 ~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 157 (204)
T 3njr_A 122 LPEAVFIGGGGSQALYDRLWEWLAPGTRIVANAVTL 157 (204)
T ss_dssp CCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEECSH
T ss_pred CCCEEEECCcccHHHHHHHHHhcCCCcEEEEEecCc
Confidence 589988765433 37899999999999999877553
No 99
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=84.73 E-value=0.55 Score=33.78 Aligned_cols=37 Identities=19% Similarity=0.343 Sum_probs=28.5
Q ss_pred CcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH 39 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~ 39 (100)
.|+|+|+||+|...+.+.+-..++.|.+.|++..+..
T Consensus 90 ~gvDiV~estG~f~s~e~a~~h~~aGakkVviSaps~ 126 (335)
T 1obf_O 90 LKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPGG 126 (335)
T ss_dssp TTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCCC
T ss_pred cCCCEEEEccCccccHHHHHHHHHcCCCEEEECCccc
Confidence 3899999999987777777788877776666665543
No 100
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=84.10 E-value=1.4 Score=27.22 Aligned_cols=36 Identities=17% Similarity=0.213 Sum_probs=27.6
Q ss_pred CcccEEEEccChH--HHHHHHHHhccCCCEEEEecCCC
Q 034260 3 AGIDVSFDCAGLN--KTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 3 ~G~D~vie~~G~~--~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
..+|+|+...... ..++++.+.+++||++++.....
T Consensus 93 ~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 130 (178)
T 3hm2_A 93 DNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAVTV 130 (178)
T ss_dssp SCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEECSH
T ss_pred CCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEeecc
Confidence 4689988665433 47999999999999999876544
No 101
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=83.99 E-value=0.56 Score=33.66 Aligned_cols=36 Identities=22% Similarity=0.281 Sum_probs=29.6
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH 39 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~ 39 (100)
++|+|+||+|...+.+.+-+.++.|.+-|++-.+..
T Consensus 91 ~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~~~ 126 (339)
T 3b1j_A 91 DIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGK 126 (339)
T ss_dssp TCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCB
T ss_pred CCCEEEECCCccccHHHHHHHHHcCCcEEEEeCCCC
Confidence 799999999988777788888888888777776654
No 102
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=83.97 E-value=0.27 Score=32.90 Aligned_cols=33 Identities=12% Similarity=0.056 Sum_probs=27.0
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
.+|+|+ +...+..++++.+.++|||+++++...
T Consensus 148 ~fD~v~-~~~~~~~l~~~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 148 SMDAII-RIYAPCKAEELARVVKPGGWVITATPG 180 (269)
T ss_dssp CEEEEE-EESCCCCHHHHHHHEEEEEEEEEEEEC
T ss_pred ceeEEE-EeCChhhHHHHHHhcCCCcEEEEEEcC
Confidence 589988 455567899999999999999988543
No 103
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=83.57 E-value=0.56 Score=33.55 Aligned_cols=36 Identities=11% Similarity=0.234 Sum_probs=29.1
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH 39 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~ 39 (100)
++|+|+||+|...+.+.+-++++.|-+-+++-.+.+
T Consensus 93 ~vDvV~eaTg~~~~~e~a~~~l~aGak~VVIs~pa~ 128 (337)
T 3e5r_O 93 GAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSK 128 (337)
T ss_dssp TCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCS
T ss_pred CCCEEEECCCchhhHHHHHHHHHcCCCEEEEecCCC
Confidence 689999999998888888888888775566666654
No 104
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=83.23 E-value=1.3 Score=29.51 Aligned_cols=34 Identities=18% Similarity=0.090 Sum_probs=25.4
Q ss_pred cccEEEEcc---ChHHHHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCA---GLNKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~---G~~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
.+|+|+-.. ..+..++.+.++++|||.+++-...
T Consensus 136 ~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 136 AFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEECCS
T ss_pred CeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 689988332 3346789999999999999876543
No 105
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=82.06 E-value=1.4 Score=26.68 Aligned_cols=36 Identities=11% Similarity=0.178 Sum_probs=26.9
Q ss_pred cccEEEE-----ccCh------------HHHHHHHHHhccCCCEEEEecCCCC
Q 034260 4 GIDVSFD-----CAGL------------NKTMSTVLDATRAGDKVCLVGMGHH 39 (100)
Q Consensus 4 G~D~vie-----~~G~------------~~~~~~al~~l~~gGrvv~vG~~~~ 39 (100)
.+|+|+. +.+. ...++.+.+.+++||++++......
T Consensus 88 ~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 140 (180)
T 1ej0_A 88 KVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGE 140 (180)
T ss_dssp CEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESST
T ss_pred ceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCC
Confidence 5788887 3333 3678889999999999998665443
No 106
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=81.03 E-value=1.5 Score=31.08 Aligned_cols=34 Identities=18% Similarity=0.127 Sum_probs=27.7
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
++|+||+|+|...+.+.+-.+++.|.+++-.+..
T Consensus 61 ~~DvV~~a~g~~~s~~~a~~~~~~G~~vId~s~~ 94 (331)
T 2yv3_A 61 PVDLVLASAGGGISRAKALVWAEGGALVVDNSSA 94 (331)
T ss_dssp CCSEEEECSHHHHHHHHHHHHHHTTCEEEECSSS
T ss_pred CCCEEEECCCccchHHHHHHHHHCCCEEEECCCc
Confidence 6899999999987888887888888777776654
No 107
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=80.66 E-value=1.4 Score=28.95 Aligned_cols=33 Identities=18% Similarity=0.182 Sum_probs=26.9
Q ss_pred CcccEEEEccChH---HHHHHHHHhccCCCEEEEec
Q 034260 3 AGIDVSFDCAGLN---KTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 3 ~G~D~vie~~G~~---~~~~~al~~l~~gGrvv~vG 35 (100)
..+|+|+...+.. ..++.+.+.+++||++++.-
T Consensus 146 ~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 146 SSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 4689998876654 56799999999999999854
No 108
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=80.49 E-value=1.5 Score=27.75 Aligned_cols=36 Identities=11% Similarity=0.101 Sum_probs=27.4
Q ss_pred CcccEEEEccCh---------------HHHHHHHHHhccCCCEEEEecCCC
Q 034260 3 AGIDVSFDCAGL---------------NKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 3 ~G~D~vie~~G~---------------~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
..+|+|+-..+. ...++++.+++++||+++++....
T Consensus 92 ~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 92 CPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp SCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred CCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 357888865533 357899999999999999886543
No 109
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=80.39 E-value=0.39 Score=30.96 Aligned_cols=32 Identities=16% Similarity=0.152 Sum_probs=26.3
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|+.+.+.....+.+.+.+++||++++.=
T Consensus 146 ~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~ 177 (215)
T 2yxe_A 146 PYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPV 177 (215)
T ss_dssp CEEEEEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred CeeEEEECCchHHHHHHHHHHcCCCcEEEEEE
Confidence 58999988776655678899999999999864
No 110
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=80.06 E-value=1.1 Score=27.64 Aligned_cols=37 Identities=11% Similarity=-0.043 Sum_probs=26.7
Q ss_pred CcccEEEEccChHHHHHHHHHhccC-CCEEEEecCCCC
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRA-GDKVCLVGMGHH 39 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~-gGrvv~vG~~~~ 39 (100)
.++|+++.|++.+.....+...+++ +|...+++....
T Consensus 83 ~~ad~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~ 120 (155)
T 2g1u_A 83 EKADMVFAFTNDDSTNFFISMNARYMFNVENVIARVYD 120 (155)
T ss_dssp GGCSEEEECSSCHHHHHHHHHHHHHTSCCSEEEEECSS
T ss_pred ccCCEEEEEeCCcHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 3689999999998777777777775 665555554443
No 111
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=79.15 E-value=0.49 Score=30.81 Aligned_cols=32 Identities=13% Similarity=0.006 Sum_probs=26.9
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|+.........+.+.+.+++||++++.-
T Consensus 162 ~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 162 LFDAIHVGASASELPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp CEEEEEECSBBSSCCHHHHHHEEEEEEEEEEE
T ss_pred CcCEEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence 47999888777667788999999999998764
No 112
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=79.01 E-value=0.95 Score=32.69 Aligned_cols=36 Identities=17% Similarity=0.228 Sum_probs=26.7
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH 39 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~ 39 (100)
|+|+|+||+|...+.+.+-..++.|.+-|++..+..
T Consensus 99 gvDiV~estG~f~s~e~a~~hl~aGakkVVIsaps~ 134 (345)
T 2b4r_O 99 QVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPK 134 (345)
T ss_dssp TCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCS
T ss_pred CCCEEEECcCccccHhhHHHHHHCCCCEEEECCCCC
Confidence 799999999987677777777777766555555543
No 113
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=78.84 E-value=1.2 Score=29.15 Aligned_cols=33 Identities=18% Similarity=0.083 Sum_probs=26.4
Q ss_pred CcccEEEEccCh---HHHHHHHHHhccCCCEEEEec
Q 034260 3 AGIDVSFDCAGL---NKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 3 ~G~D~vie~~G~---~~~~~~al~~l~~gGrvv~vG 35 (100)
..+|+|+...+. ...++.+.+.+++||++++.-
T Consensus 125 ~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 125 PLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp CCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred CCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 358998876654 467889999999999999863
No 114
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=78.63 E-value=0.7 Score=33.07 Aligned_cols=36 Identities=14% Similarity=0.266 Sum_probs=28.2
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH 39 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~ 39 (100)
|+|+|+||+|...+.+.+-+.++.|.+=+++..+..
T Consensus 86 gvDiV~estG~~~s~e~a~~~l~aGakkvVIsaps~ 121 (331)
T 2g82_O 86 GVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAK 121 (331)
T ss_dssp TEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCB
T ss_pred CCCEEEECCCchhhHHHHHHHHHCCCCEEEECCCCc
Confidence 789999999988777777788877765566676654
No 115
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=78.15 E-value=1.3 Score=32.06 Aligned_cols=37 Identities=14% Similarity=0.228 Sum_probs=27.9
Q ss_pred CcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH 39 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~ 39 (100)
.++|+||||+|...+.+.+-+.++.|.+=+++-.+.+
T Consensus 104 ~~vDvV~eatg~~~s~e~a~~~l~~GakkvVId~pad 140 (354)
T 3cps_A 104 SGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAPPK 140 (354)
T ss_dssp HTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCS
T ss_pred CCCCEEEECCCchhhHHHHHHHHHcCCcEEEEeCCCC
Confidence 3789999999998778888888877765455555543
No 116
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=77.85 E-value=3.7 Score=28.29 Aligned_cols=34 Identities=9% Similarity=0.191 Sum_probs=28.2
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
.+|+|+||++....-+...+.|+.|-.++.....
T Consensus 60 ~pD~VVe~A~~~av~e~~~~iL~aG~dvv~~S~g 93 (253)
T 1j5p_A 60 DVSTVVECASPEAVKEYSLQILKNPVNYIIISTS 93 (253)
T ss_dssp TCCEEEECSCHHHHHHHHHHHTTSSSEEEECCGG
T ss_pred CCCEEEECCCHHHHHHHHHHHHHCCCCEEEcChh
Confidence 6899999999875555699999999888887654
No 117
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=77.53 E-value=2.5 Score=30.07 Aligned_cols=35 Identities=9% Similarity=-0.089 Sum_probs=28.8
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
++|+|++|+|...+.+.+-.+++.|-+++..+...
T Consensus 77 ~vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~sa~~ 111 (340)
T 1b7g_O 77 TSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEK 111 (340)
T ss_dssp HCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred CCCEEEECCCCchhHHHHHHHHHcCCeEEEeCCCC
Confidence 58999999999877777777777787888887764
No 118
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=77.51 E-value=2.9 Score=29.62 Aligned_cols=34 Identities=18% Similarity=-0.006 Sum_probs=26.8
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
++|+||+|+|...+.+.+-.+++.|.+++..+..
T Consensus 65 ~vDvVf~a~g~~~s~~~a~~~~~~G~~vId~s~~ 98 (336)
T 2r00_A 65 QVHIALFSAGGELSAKWAPIAAEAGVVVIDNTSH 98 (336)
T ss_dssp GCSEEEECSCHHHHHHHHHHHHHTTCEEEECSST
T ss_pred CCCEEEECCCchHHHHHHHHHHHcCCEEEEcCCc
Confidence 6899999999987777777777777776666544
No 119
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=77.43 E-value=4 Score=29.00 Aligned_cols=35 Identities=17% Similarity=0.108 Sum_probs=26.8
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
++|+||+|+|...+.+.+-.+++.|.+++.+....
T Consensus 68 ~~DvV~~a~g~~~s~~~a~~~~~aG~kvId~Sa~~ 102 (340)
T 2hjs_A 68 SVGLAFFAAAAEVSRAHAERARAAGCSVIDLSGAL 102 (340)
T ss_dssp GCSEEEECSCHHHHHHHHHHHHHTTCEEEETTCTT
T ss_pred CCCEEEEcCCcHHHHHHHHHHHHCCCEEEEeCCCC
Confidence 68999999998777777767777777777665443
No 120
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=77.07 E-value=0.58 Score=30.59 Aligned_cols=31 Identities=10% Similarity=0.130 Sum_probs=26.4
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+.+.......+++.+.+++||++++.
T Consensus 163 ~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~ 193 (227)
T 1r18_A 163 PYNAIHVGAAAPDTPTELINQLASGGRLIVP 193 (227)
T ss_dssp SEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred CccEEEECCchHHHHHHHHHHhcCCCEEEEE
Confidence 5799998877766778899999999999875
No 121
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=77.05 E-value=0.5 Score=28.91 Aligned_cols=34 Identities=12% Similarity=0.065 Sum_probs=25.8
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
++|+++.|++.+..+... +.+++++.++-+|.+.
T Consensus 80 ~~Divi~at~~~~~~~~~-~~l~~g~~vid~~~p~ 113 (144)
T 3oj0_A 80 NNDVIITATSSKTPIVEE-RSLMPGKLFIDLGNPP 113 (144)
T ss_dssp TCSEEEECSCCSSCSBCG-GGCCTTCEEEECCSSC
T ss_pred CCCEEEEeCCCCCcEeeH-HHcCCCCEEEEccCCc
Confidence 579999999986443333 7788998888888764
No 122
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=76.92 E-value=2.5 Score=30.44 Aligned_cols=35 Identities=14% Similarity=0.205 Sum_probs=25.4
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
++|+||+|+|...+.+.+-.+++.|-+.+++..+.
T Consensus 65 ~~DvVf~a~g~~~s~~~a~~~~~~G~k~vVID~ss 99 (367)
T 1t4b_A 65 ALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAAS 99 (367)
T ss_dssp TCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred CCCEEEECCCchhHHHHHHHHHHCCCCEEEEcCCh
Confidence 68999999998777776666666665455566554
No 123
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=76.92 E-value=0.98 Score=33.61 Aligned_cols=52 Identities=15% Similarity=0.169 Sum_probs=39.8
Q ss_pred cccEEEEccChHHHHH-HHHHhccCCCEEEEecCCCCCcccChHHHHhcCcEEEe
Q 034260 4 GIDVSFDCAGLNKTMS-TVLDATRAGDKVCLVGMGHHDMTVPLTPAAARYLIYGF 57 (100)
Q Consensus 4 G~D~vie~~G~~~~~~-~al~~l~~gGrvv~vG~~~~~~~i~~~~l~~k~~~i~G 57 (100)
.+|+++.|++....+. +.++.+++++.++-+| ..+.++++..+..++.+..+
T Consensus 266 ~ADVVilt~gt~~iI~~e~l~~MK~gAIVINvg--Rg~vEID~~~L~~~~~~~~~ 318 (436)
T 3h9u_A 266 EAHIFVTTTGNDDIITSEHFPRMRDDAIVCNIG--HFDTEIQVAWLKANAKERVE 318 (436)
T ss_dssp TCSEEEECSSCSCSBCTTTGGGCCTTEEEEECS--SSGGGBCHHHHHHHCSEEEE
T ss_pred hCCEEEECCCCcCccCHHHHhhcCCCcEEEEeC--CCCCccCHHHHHhhcCceEe
Confidence 5899999998765554 6788899998887776 34567888888877777664
No 124
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=76.30 E-value=0.48 Score=30.43 Aligned_cols=31 Identities=13% Similarity=0.125 Sum_probs=25.1
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+.........+.+.+.+++||++++.
T Consensus 143 ~~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 143 PFDAIIVTAAPPEIPTALMTQLDEGGILVLP 173 (210)
T ss_dssp CEEEEEESSBCSSCCTHHHHTEEEEEEEEEE
T ss_pred CccEEEEccchhhhhHHHHHhcccCcEEEEE
Confidence 5899998766655566788999999999875
No 125
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=76.02 E-value=1.4 Score=28.98 Aligned_cols=33 Identities=9% Similarity=-0.231 Sum_probs=27.4
Q ss_pred cccEEEEccChH-HHHHHHHHhccCCCEEEEecC
Q 034260 4 GIDVSFDCAGLN-KTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 4 G~D~vie~~G~~-~~~~~al~~l~~gGrvv~vG~ 36 (100)
.+|+|+...+.+ ..++.+.+++++||+++++-.
T Consensus 166 ~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 166 AYDGVALDLMEPWKVLEKAALALKPDRFLVAYLP 199 (258)
T ss_dssp CEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 589988766655 678999999999999998763
No 126
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=75.91 E-value=2.9 Score=29.76 Aligned_cols=35 Identities=3% Similarity=-0.173 Sum_probs=28.1
Q ss_pred CcccEEEEccChHHHHHHHHHhccCCCEEEEecCC
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
.++|+||+|+|...+.+.+-++++.|-+++-.+..
T Consensus 67 ~~vDvV~~a~g~~~s~~~a~~~~~aG~~VId~Sa~ 101 (345)
T 2ozp_A 67 EPADILVLALPHGVFAREFDRYSALAPVLVDLSAD 101 (345)
T ss_dssp CCCSEEEECCCTTHHHHTHHHHHTTCSEEEECSST
T ss_pred cCCCEEEEcCCcHHHHHHHHHHHHCCCEEEEcCcc
Confidence 36899999999987777777888888887776653
No 127
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=75.87 E-value=0.64 Score=30.22 Aligned_cols=32 Identities=16% Similarity=0.137 Sum_probs=26.5
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|+.........+.+.+.+++||++++.-
T Consensus 151 ~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 151 PYDAIHVGAAAPVVPQALIDQLKPGGRLILPV 182 (226)
T ss_dssp CEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred CcCEEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence 47998887776667789999999999998853
No 128
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=75.62 E-value=1.5 Score=29.33 Aligned_cols=34 Identities=12% Similarity=-0.012 Sum_probs=27.4
Q ss_pred cccEEEEccChH-HHHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCAGLN-KTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~G~~-~~~~~al~~l~~gGrvv~vG~~ 37 (100)
.+|+|+-....+ ..++.+.+++++||++++....
T Consensus 171 ~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 171 SVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp CEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred ceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 589888766655 6789999999999999987543
No 129
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=75.16 E-value=17 Score=24.96 Aligned_cols=38 Identities=18% Similarity=0.148 Sum_probs=28.2
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccCh
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPL 45 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~ 45 (100)
.+|+|+.|++.....+.+.++++.| +.|++ .+|...+.
T Consensus 71 ~~D~V~i~tp~~~h~~~~~~al~~G-~~v~~---eKp~~~~~ 108 (346)
T 3cea_A 71 NIDAIFIVAPTPFHPEMTIYAMNAG-LNVFC---EKPLGLDF 108 (346)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHTT-CEEEE---CSCCCSCH
T ss_pred CCCEEEEeCChHhHHHHHHHHHHCC-CEEEE---cCCCCCCH
Confidence 6899999999988888888888875 55555 33444444
No 130
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=75.12 E-value=3.9 Score=29.58 Aligned_cols=34 Identities=24% Similarity=0.181 Sum_probs=27.4
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
++|+||+|+|...+.+.+-++++.|-+++-.+..
T Consensus 64 ~~Dvvf~a~~~~~s~~~a~~~~~~G~~vIDlSa~ 97 (366)
T 3pwk_A 64 GVDIALFSAGSSTSAKYAPYAVKAGVVVVDNTSY 97 (366)
T ss_dssp TCSEEEECSCHHHHHHHHHHHHHTTCEEEECSST
T ss_pred CCCEEEECCChHhHHHHHHHHHHCCCEEEEcCCc
Confidence 6899999999987777777777888777776654
No 131
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=74.28 E-value=0.72 Score=30.35 Aligned_cols=32 Identities=22% Similarity=0.262 Sum_probs=26.1
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|+.+.+.....+.+.+.+++||++++.-
T Consensus 158 ~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 158 PYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPV 189 (235)
T ss_dssp CEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred CccEEEECCcHHHHHHHHHHhcCCCcEEEEEE
Confidence 37999988776656678899999999998753
No 132
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=73.99 E-value=4.8 Score=27.44 Aligned_cols=34 Identities=9% Similarity=0.125 Sum_probs=26.4
Q ss_pred cccEEEEc-----cC---hHHHHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDC-----AG---LNKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~-----~G---~~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
.+|+|+.. .+ ....++++.++++|||++++.-..
T Consensus 155 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 196 (318)
T 2fk8_A 155 PVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSV 196 (318)
T ss_dssp CCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred CcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 57888876 43 246789999999999999986544
No 133
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=73.62 E-value=2.1 Score=26.73 Aligned_cols=23 Identities=13% Similarity=0.306 Sum_probs=17.6
Q ss_pred HHHHHHHHhccCCCEEEEecCCC
Q 034260 16 KTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 16 ~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
..++++.+.++|||+++++-...
T Consensus 116 ~~l~~~~~~LkpgG~l~i~~~~~ 138 (185)
T 3mti_A 116 EAIEKILDRLEVGGRLAIMIYYG 138 (185)
T ss_dssp HHHHHHHHHEEEEEEEEEEEC--
T ss_pred HHHHHHHHhcCCCcEEEEEEeCC
Confidence 35688889999999999886543
No 134
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=73.25 E-value=2.5 Score=26.69 Aligned_cols=24 Identities=13% Similarity=0.166 Sum_probs=19.7
Q ss_pred HHHHHHHHHhccCCCEEEEecCCC
Q 034260 15 NKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 15 ~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
...++++.+.+++||+++++....
T Consensus 139 ~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 139 DQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp HHHHHHHHHHEEEEEEEEEEESCC
T ss_pred HHHHHHHHHhCcCCCEEEEEeCCC
Confidence 457888899999999999886543
No 135
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=72.83 E-value=3.4 Score=25.58 Aligned_cols=31 Identities=13% Similarity=0.206 Sum_probs=24.5
Q ss_pred cccEEEEc-------cChHHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDC-------AGLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~-------~G~~~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+-+ .-....++++.+.|+|||++++.
T Consensus 63 ~fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~ 100 (176)
T 2ld4_A 63 SFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLK 100 (176)
T ss_dssp CEEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred CEeEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEE
Confidence 47888863 23356899999999999999984
No 136
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=72.51 E-value=2.9 Score=27.28 Aligned_cols=31 Identities=10% Similarity=0.062 Sum_probs=24.5
Q ss_pred cccEEEEccChH----HHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLN----KTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~----~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+.....+ ..++++.+.++|||+++++
T Consensus 143 ~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 143 KVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 579988655543 3488889999999999986
No 137
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=72.38 E-value=1.5 Score=31.38 Aligned_cols=36 Identities=17% Similarity=0.295 Sum_probs=26.5
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH 39 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~ 39 (100)
++|+||||+|...+.+.+-+.++.|.+=+++-.+.+
T Consensus 88 ~vDvV~~atg~~~s~e~a~~~l~~Gak~vVId~pa~ 123 (334)
T 3cmc_O 88 GVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAK 123 (334)
T ss_dssp TCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCB
T ss_pred ccCEEEECCCchhhHHHHHHHHHCCCCEEEEeCCCc
Confidence 799999999988777777777777664344555543
No 138
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=72.14 E-value=4.4 Score=28.94 Aligned_cols=35 Identities=11% Similarity=-0.001 Sum_probs=24.4
Q ss_pred cccEEEEccChHHHHHHHH-HhccCCCEEEEecCCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVL-DATRAGDKVCLVGMGHH 39 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al-~~l~~gGrvv~vG~~~~ 39 (100)
++|+|+||+|.....+.+- .+++.| +.|+...+..
T Consensus 81 ~vDiV~eatg~~~s~~~a~~~~l~aG-~~VI~sap~~ 116 (343)
T 2yyy_A 81 DADIVVDGAPKKIGKQNLENIYKPHK-VKAILQGGEK 116 (343)
T ss_dssp GCSEEEECCCTTHHHHHHHHTTTTTT-CEEEECTTSC
T ss_pred CCCEEEECCCccccHHHHHHHHHHCC-CEEEECCCcc
Confidence 6899999999865566664 566655 6566665543
No 139
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=71.90 E-value=2 Score=30.18 Aligned_cols=23 Identities=4% Similarity=0.273 Sum_probs=20.2
Q ss_pred HHHHHHHHhccCCCEEEEecCCC
Q 034260 16 KTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 16 ~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
..++++.+.|+||||++++....
T Consensus 214 ~~L~~a~~~L~~gGrl~visfHS 236 (285)
T 1wg8_A 214 EFLEQAAEVLAPGGRLVVIAFHS 236 (285)
T ss_dssp HHHHHHHHHEEEEEEEEEEECSH
T ss_pred HHHHHHHHHhcCCCEEEEEecCc
Confidence 46889999999999999998775
No 140
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=71.75 E-value=5.8 Score=26.16 Aligned_cols=33 Identities=18% Similarity=0.139 Sum_probs=24.4
Q ss_pred CcccEEEEccChHHHHHHHHHhccCCCEEEEecC
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~ 36 (100)
.++|+|++|++.....+.+..+++.| +.+++.-
T Consensus 49 ~~~DvVv~~~~~~~~~~~~~~~l~~G-~~vv~~~ 81 (236)
T 2dc1_A 49 REMDVAVEAASQQAVKDYAEKILKAG-IDLIVLS 81 (236)
T ss_dssp SCCSEEEECSCHHHHHHHHHHHHHTT-CEEEESC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHHCC-CcEEEEC
Confidence 36899999999887777777777765 4555543
No 141
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=71.70 E-value=3.7 Score=27.08 Aligned_cols=33 Identities=12% Similarity=0.119 Sum_probs=25.9
Q ss_pred CcccEEEEccCh------HHHHHHHHHhccCCCEEEEec
Q 034260 3 AGIDVSFDCAGL------NKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 3 ~G~D~vie~~G~------~~~~~~al~~l~~gGrvv~vG 35 (100)
..+|+|+-.... ...++++.++|+|||++++..
T Consensus 102 ~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 102 ERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 357888876432 467899999999999999863
No 142
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=71.67 E-value=2.4 Score=27.89 Aligned_cols=33 Identities=9% Similarity=-0.007 Sum_probs=27.2
Q ss_pred cccEEEEccChH-HHHHHHHHhccCCCEEEEecC
Q 034260 4 GIDVSFDCAGLN-KTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 4 G~D~vie~~G~~-~~~~~al~~l~~gGrvv~vG~ 36 (100)
.+|+|+-..+.+ ..++++.+.+++||++++...
T Consensus 162 ~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 195 (255)
T 3mb5_A 162 NVDHVILDLPQPERVVEHAAKALKPGGFFVAYTP 195 (255)
T ss_dssp SEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEEC
Confidence 489988877665 478999999999999998753
No 143
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=71.58 E-value=3.6 Score=26.60 Aligned_cols=31 Identities=13% Similarity=0.102 Sum_probs=24.2
Q ss_pred cccEEEEccChH----HHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLN----KTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~----~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+-....+ ..++.+.+.++|||++++.
T Consensus 143 ~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 143 KVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 578888655433 2388899999999999987
No 144
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=71.56 E-value=4.8 Score=28.82 Aligned_cols=34 Identities=21% Similarity=0.171 Sum_probs=26.5
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
++|+||+|+|...+.+.+-++++.|-+++-.+..
T Consensus 63 ~~Dvvf~a~~~~~s~~~a~~~~~~G~~vID~Sa~ 96 (344)
T 3tz6_A 63 GLDIALFSAGSAMSKVQAPRFAAAGVTVIDNSSA 96 (344)
T ss_dssp TCSEEEECSCHHHHHHHHHHHHHTTCEEEECSST
T ss_pred cCCEEEECCChHHHHHHHHHHHhCCCEEEECCCc
Confidence 6899999999987777777777777776666653
No 145
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=71.52 E-value=1.6 Score=31.19 Aligned_cols=36 Identities=17% Similarity=0.281 Sum_probs=26.7
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHH 39 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~ 39 (100)
++|+||||+|...+.+.+-+.++.|.+=+++-.+.+
T Consensus 89 ~vDvV~~atg~~~s~e~a~~~l~aGakkvVId~~a~ 124 (332)
T 1hdg_O 89 GVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAK 124 (332)
T ss_dssp TCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCB
T ss_pred CCCEEEECCccchhHHHHHHHHHcCCcEEEEeCCCC
Confidence 689999999988777777777777664345555544
No 146
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=71.20 E-value=7 Score=25.01 Aligned_cols=34 Identities=18% Similarity=0.056 Sum_probs=24.9
Q ss_pred cccEEEEcc---ChHHHHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCA---GLNKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~---G~~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
.+|+|+-.. ..+..++.+.+.++|||.+++-...
T Consensus 133 ~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 133 PFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred CcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 489988443 2245788999999999988875443
No 147
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=71.00 E-value=2.3 Score=28.64 Aligned_cols=33 Identities=15% Similarity=0.157 Sum_probs=27.4
Q ss_pred cccEEEEccChH-HHHHHHHHhccCCCEEEEecC
Q 034260 4 GIDVSFDCAGLN-KTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 4 G~D~vie~~G~~-~~~~~al~~l~~gGrvv~vG~ 36 (100)
.+|+|+-..+.+ ..++.+.+++++||++++.-.
T Consensus 181 ~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 181 DVDALFLDVPDPWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp SEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred ccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 589988877665 678999999999999998753
No 148
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=70.93 E-value=3.2 Score=29.48 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=24.8
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
++|+|++|+|.....+.+-++++.|-+ |+.-.+.
T Consensus 78 ~vDvV~~atp~~~~~~~a~~~l~aG~~-VId~sp~ 111 (337)
T 1cf2_P 78 EADIVIDCTPEGIGAKNLKMYKEKGIK-AIFQGGE 111 (337)
T ss_dssp TCSEEEECCSTTHHHHHHHHHHHHTCC-EEECTTS
T ss_pred CCCEEEECCCchhhHHHHHHHHHcCCE-EEEecCC
Confidence 589999999988777777777776655 4444443
No 149
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=70.77 E-value=2.7 Score=27.60 Aligned_cols=33 Identities=15% Similarity=0.182 Sum_probs=24.5
Q ss_pred CcccEEEE-ccC--hHHHHHHHHHhccCCCEEEEec
Q 034260 3 AGIDVSFD-CAG--LNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 3 ~G~D~vie-~~G--~~~~~~~al~~l~~gGrvv~vG 35 (100)
..+|+|+- +.. ....++.+.+++++||.+++--
T Consensus 147 ~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 147 PEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp CCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred CCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeC
Confidence 45898874 332 2356899999999999999854
No 150
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=70.05 E-value=2.3 Score=30.78 Aligned_cols=23 Identities=9% Similarity=0.404 Sum_probs=20.1
Q ss_pred HHHHHHHHhccCCCEEEEecCCC
Q 034260 16 KTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 16 ~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
..++++.++|++|||++++....
T Consensus 255 ~~L~~a~~~L~~gGRl~VISFHS 277 (347)
T 3tka_A 255 QALKSSLNVLAPGGRLSIISFHS 277 (347)
T ss_dssp HHHHHHHHHEEEEEEEEEEESSH
T ss_pred HHHHHHHHHhCCCCEEEEEecCc
Confidence 46889999999999999998764
No 151
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=69.35 E-value=8.1 Score=25.75 Aligned_cols=33 Identities=12% Similarity=-0.001 Sum_probs=24.9
Q ss_pred cccEEEEc-----c---ChHHHHHHHHHhccCCCEEEEecC
Q 034260 4 GIDVSFDC-----A---GLNKTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 4 G~D~vie~-----~---G~~~~~~~al~~l~~gGrvv~vG~ 36 (100)
.+|+|+-. . .....++++.+.++|||++++.-.
T Consensus 129 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 129 PVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI 169 (287)
T ss_dssp CCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 47887754 2 234678999999999999998653
No 152
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=68.95 E-value=1.2 Score=28.99 Aligned_cols=33 Identities=12% Similarity=-0.018 Sum_probs=25.9
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~ 36 (100)
.+|+|+.........+++.+.+++||++++.-.
T Consensus 134 ~fD~v~~~~~~~~~~~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 134 PYDRVVVWATAPTLLCKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp CEEEEEESSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred CccEEEECCcHHHHHHHHHHHcCCCcEEEEEEc
Confidence 578888776655555788899999999998743
No 153
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=68.74 E-value=5.7 Score=28.52 Aligned_cols=35 Identities=14% Similarity=0.074 Sum_probs=28.7
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
++|+||+|+|+..+.+.+-++++.|-+++-.+...
T Consensus 79 ~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~ 113 (359)
T 4dpl_A 79 DVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDH 113 (359)
T ss_dssp TCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTT
T ss_pred CCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCc
Confidence 68999999999877777777788888888877654
No 154
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=68.74 E-value=5.7 Score=28.52 Aligned_cols=35 Identities=14% Similarity=0.074 Sum_probs=28.7
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
++|+||+|+|+..+.+.+-++++.|-+++-.+...
T Consensus 79 ~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~ 113 (359)
T 4dpk_A 79 DVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDH 113 (359)
T ss_dssp TCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTT
T ss_pred CCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCc
Confidence 68999999999877777777788888888877654
No 155
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=68.58 E-value=6 Score=28.09 Aligned_cols=32 Identities=19% Similarity=0.180 Sum_probs=25.3
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG 35 (100)
++|+||+|+|...+.+.+-++++.|-+++-.+
T Consensus 77 ~vDvVf~atp~~~s~~~a~~~~~aG~~VId~s 108 (350)
T 2ep5_A 77 DVDVVLSALPNELAESIELELVKNGKIVVSNA 108 (350)
T ss_dssp TCSEEEECCCHHHHHHHHHHHHHTTCEEEECS
T ss_pred CCCEEEECCChHHHHHHHHHHHHCCCEEEECC
Confidence 68999999999877777777777777755544
No 156
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=68.19 E-value=7 Score=27.84 Aligned_cols=36 Identities=19% Similarity=0.147 Sum_probs=28.9
Q ss_pred CcccEEEEccChHHHHHHHHHhccCCCEEEEecCCC
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
.++|+||.|+|+..+.+.+-++++.|-+++-.+...
T Consensus 74 ~~~Dvvf~a~p~~~s~~~~~~~~~~g~~vIDlSa~f 109 (337)
T 3dr3_A 74 PGVDVVFLATAHEVSHDLAPQFLEAGCVVFDLSGAF 109 (337)
T ss_dssp TTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTT
T ss_pred cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCcc
Confidence 368999999999877777777888888888777553
No 157
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=67.78 E-value=4.7 Score=25.37 Aligned_cols=35 Identities=11% Similarity=0.104 Sum_probs=25.9
Q ss_pred cccEEEEccC------hHHHHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCAG------LNKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G------~~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
.+|+|+-+.. ....++.+.++++|||++++.....
T Consensus 94 ~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 94 AWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAP 134 (202)
T ss_dssp TCSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred CccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 5798886532 2356788889999999999876543
No 158
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=67.69 E-value=3.1 Score=27.23 Aligned_cols=35 Identities=9% Similarity=0.131 Sum_probs=25.8
Q ss_pred CcccEEEEcc--------ChHHHHHHHHHhccCCCEEEEecCC
Q 034260 3 AGIDVSFDCA--------GLNKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 3 ~G~D~vie~~--------G~~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
..+|+|+-.. .....++++.++++|||++++....
T Consensus 119 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (266)
T 3ujc_A 119 NNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYC 161 (266)
T ss_dssp TCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 3578888752 2234678899999999999988643
No 159
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=67.60 E-value=5 Score=27.40 Aligned_cols=35 Identities=11% Similarity=0.176 Sum_probs=26.8
Q ss_pred CcccEEEE-----ccChHHHHHHHHHhccCCCEEEEecCC
Q 034260 3 AGIDVSFD-----CAGLNKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 3 ~G~D~vie-----~~G~~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
+.+|+|+- ..+....++++.++|+|||+++++...
T Consensus 184 ~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 223 (312)
T 3vc1_A 184 GAVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITGC 223 (312)
T ss_dssp TCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEcc
Confidence 35788765 234567899999999999999987643
No 160
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=67.44 E-value=5.5 Score=25.15 Aligned_cols=36 Identities=19% Similarity=0.087 Sum_probs=26.7
Q ss_pred CcccEEEEccC-----h---HHHHHHHHHhccCCCEEEEecCCC
Q 034260 3 AGIDVSFDCAG-----L---NKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 3 ~G~D~vie~~G-----~---~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
..+|+|+-... . ...++++.+.++|||++++.....
T Consensus 106 ~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 106 RQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred CceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 35788775432 2 457888999999999999986554
No 161
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=67.42 E-value=5 Score=24.62 Aligned_cols=33 Identities=15% Similarity=0.401 Sum_probs=24.9
Q ss_pred cccEEEEccC---hHHHHHHHHHhccCCCEEEEecC
Q 034260 4 GIDVSFDCAG---LNKTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 4 G~D~vie~~G---~~~~~~~al~~l~~gGrvv~vG~ 36 (100)
.+|+|+-... ....++.+.+.+++||++++...
T Consensus 100 ~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 100 DIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp CEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 5788886543 24678888899999999988654
No 162
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=67.38 E-value=4.3 Score=29.68 Aligned_cols=23 Identities=4% Similarity=0.193 Sum_probs=18.4
Q ss_pred HHHHHHHHHhccCCCEEEEecCC
Q 034260 15 NKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 15 ~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
...++.+.++++|||++++.-..
T Consensus 369 ~~iL~~a~~~LkpGG~lvy~tcs 391 (450)
T 2yxl_A 369 RELLESAARLVKPGGRLLYTTCS 391 (450)
T ss_dssp HHHHHHHHTTEEEEEEEEEEESC
T ss_pred HHHHHHHHHhcCCCcEEEEEeCC
Confidence 34688899999999999976543
No 163
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=67.26 E-value=5.1 Score=28.21 Aligned_cols=34 Identities=15% Similarity=0.090 Sum_probs=25.3
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
++|+|++|+|.....+.+.++++.| +-|++..+.
T Consensus 79 ~vDvV~~aTp~~~h~~~a~~~l~aG-k~Vi~sap~ 112 (334)
T 2czc_A 79 KVDIIVDATPGGIGAKNKPLYEKAG-VKAIFQGGE 112 (334)
T ss_dssp TCSEEEECCSTTHHHHHHHHHHHHT-CEEEECTTS
T ss_pred CCCEEEECCCccccHHHHHHHHHcC-CceEeeccc
Confidence 6899999999876677777777766 556665554
No 164
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=67.22 E-value=1.1 Score=32.50 Aligned_cols=36 Identities=28% Similarity=0.441 Sum_probs=27.8
Q ss_pred cccEEEEccChHHH----HHHHHHhcc-CCCEEEEecCCCC
Q 034260 4 GIDVSFDCAGLNKT----MSTVLDATR-AGDKVCLVGMGHH 39 (100)
Q Consensus 4 G~D~vie~~G~~~~----~~~al~~l~-~gGrvv~vG~~~~ 39 (100)
|+|+|+||+|.-.+ .+.+-..++ .|.+=|++..+..
T Consensus 107 gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsaps~ 147 (356)
T 3hja_A 107 GIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAK 147 (356)
T ss_dssp TCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSCCS
T ss_pred CCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCCCC
Confidence 79999999998766 677778888 7776566666643
No 165
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=66.46 E-value=4.6 Score=26.01 Aligned_cols=34 Identities=18% Similarity=0.207 Sum_probs=25.4
Q ss_pred CcccEEEEccCh---HHHHHHHHHhccCCCEEEEecC
Q 034260 3 AGIDVSFDCAGL---NKTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 3 ~G~D~vie~~G~---~~~~~~al~~l~~gGrvv~vG~ 36 (100)
..+|+|+-.... ...++.+.+++++||.+++-..
T Consensus 144 ~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 144 GTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp TCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred CCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 458887754332 3578999999999999998653
No 166
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=65.72 E-value=7.3 Score=26.67 Aligned_cols=51 Identities=14% Similarity=-0.001 Sum_probs=35.4
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccChHHHHhcCcEEE
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPLTPAAARYLIYG 56 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~~~l~~k~~~i~ 56 (100)
.+|+++.|++....-++.++.+++++.++-++..+.... +.....++..+.
T Consensus 213 ~aDvVi~~~p~~~i~~~~l~~mk~~~~lin~ar~~~~~~--~~~a~~~Gv~~~ 263 (293)
T 3d4o_A 213 DVDVCINTIPALVVTANVLAEMPSHTFVIDLASKPGGTD--FRYAEKRGIKAL 263 (293)
T ss_dssp TCSEEEECCSSCCBCHHHHHHSCTTCEEEECSSTTCSBC--HHHHHHHTCEEE
T ss_pred CCCEEEECCChHHhCHHHHHhcCCCCEEEEecCCCCCCC--HHHHHHCCCEEE
Confidence 589999999864223467888999999999987544443 344445566665
No 167
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=65.63 E-value=1.9 Score=32.55 Aligned_cols=37 Identities=14% Similarity=0.264 Sum_probs=30.2
Q ss_pred cccEEEEccChHHHHH-HHHHhccCCCEEEEecCCCCC
Q 034260 4 GIDVSFDCAGLNKTMS-TVLDATRAGDKVCLVGMGHHD 40 (100)
Q Consensus 4 G~D~vie~~G~~~~~~-~al~~l~~gGrvv~vG~~~~~ 40 (100)
.+|++++++|....+. ..++.+++++.++.+|.+..+
T Consensus 320 ~aDvVi~atG~~~vl~~e~l~~mk~gaiVvNaG~~~~E 357 (488)
T 3ond_A 320 EADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHFDNE 357 (488)
T ss_dssp TCSEEEECSSCSCSBCHHHHTTSCTTEEEEESSSTTTT
T ss_pred hcCEEEeCCCChhhhhHHHHHhcCCCeEEEEcCCCCcc
Confidence 5899999999876664 489999999999999976433
No 168
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=65.27 E-value=2.8 Score=27.49 Aligned_cols=32 Identities=13% Similarity=0.273 Sum_probs=25.2
Q ss_pred cccEEEE-----ccChHHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFD-----CAGLNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie-----~~G~~~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|+- ..+....++.+.+.++|||++++.-
T Consensus 114 ~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 114 ELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp CEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence 5777753 3455678999999999999999875
No 169
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=64.81 E-value=5.5 Score=28.50 Aligned_cols=32 Identities=16% Similarity=0.215 Sum_probs=24.7
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~ 36 (100)
++|+||+|+|...+.+.+-++ +.|-+++-.+.
T Consensus 82 ~vDvVf~atp~~~s~~~a~~~-~aG~~VId~sa 113 (359)
T 1xyg_A 82 TVDAVFCCLPHGTTQEIIKEL-PTALKIVDLSA 113 (359)
T ss_dssp GCSEEEECCCTTTHHHHHHTS-CTTCEEEECSS
T ss_pred CCCEEEEcCCchhHHHHHHHH-hCCCEEEECCc
Confidence 689999999988778877777 66666555554
No 170
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=64.78 E-value=7.5 Score=27.57 Aligned_cols=32 Identities=9% Similarity=0.141 Sum_probs=23.6
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG 35 (100)
++|+||+|+|...+.+.+-++++.|-+++-.+
T Consensus 83 ~~DvV~~atp~~~~~~~a~~~~~aG~~VId~s 114 (354)
T 1ys4_A 83 DVDIVFSALPSDLAKKFEPEFAKEGKLIFSNA 114 (354)
T ss_dssp TCCEEEECCCHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCCEEEECCCchHHHHHHHHHHHCCCEEEECC
Confidence 78999999999777766667776666644433
No 171
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=64.26 E-value=4.2 Score=27.16 Aligned_cols=35 Identities=14% Similarity=0.081 Sum_probs=26.2
Q ss_pred cccEEEEccC---hHHHHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCAG---LNKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G---~~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
.+|+|+-..- ....++.+.+.++|||++++.+...
T Consensus 184 ~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~~~~ 221 (254)
T 2nxc_A 184 PFDLLVANLYAELHAALAPRYREALVPGGRALLTGILK 221 (254)
T ss_dssp CEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEEEG
T ss_pred CCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEeecc
Confidence 5788886542 2356788889999999999987554
No 172
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=63.98 E-value=2.9 Score=26.76 Aligned_cols=35 Identities=20% Similarity=0.344 Sum_probs=25.3
Q ss_pred cccEEEEcc------ChH---HHHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCA------GLN---KTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~------G~~---~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
.+|+|+-.. ... ..++++.+.++|||+++++-...
T Consensus 101 ~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 101 SFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp CEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred ceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 477777432 122 57889999999999999986543
No 173
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=63.44 E-value=6.8 Score=25.09 Aligned_cols=34 Identities=15% Similarity=0.116 Sum_probs=25.2
Q ss_pred CcccEEEEccC---hHHHHHHHHHhccCCCEEEEecC
Q 034260 3 AGIDVSFDCAG---LNKTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 3 ~G~D~vie~~G---~~~~~~~al~~l~~gGrvv~vG~ 36 (100)
..+|+|+-... ....++.+.+.++|||.+++-..
T Consensus 139 ~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 139 WQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp TCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred CCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 46898884433 23568899999999999997543
No 174
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=63.28 E-value=3.9 Score=30.67 Aligned_cols=36 Identities=11% Similarity=0.067 Sum_probs=30.0
Q ss_pred cccEEEEccChHHHH-HHHHHhccCCCEEEEecCCCC
Q 034260 4 GIDVSFDCAGLNKTM-STVLDATRAGDKVCLVGMGHH 39 (100)
Q Consensus 4 G~D~vie~~G~~~~~-~~al~~l~~gGrvv~vG~~~~ 39 (100)
.+|+++.|+|....+ .+.++.+++++.++-+|.+..
T Consensus 302 ~ADIVv~atgt~~lI~~e~l~~MK~GAILINvGRgdv 338 (464)
T 3n58_A 302 TADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFDN 338 (464)
T ss_dssp GCSEEEECCSSSSSBCHHHHHHSCTTEEEEECSSSTT
T ss_pred hCCEEEECCCCccccCHHHHhcCCCCeEEEEcCCCCc
Confidence 579999999976555 688999999999999887653
No 175
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=63.19 E-value=1.7 Score=28.28 Aligned_cols=35 Identities=11% Similarity=0.114 Sum_probs=28.3
Q ss_pred CcccEEEEccChHHHHHHHHHhccCCCEEEEecCC
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
..+|+|+-.......++++.+.++|||+++..+..
T Consensus 110 ~~fD~v~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (226)
T 3m33_A 110 APFGLIVSRRGPTSVILRLPELAAPDAHFLYVGPR 144 (226)
T ss_dssp CCEEEEEEESCCSGGGGGHHHHEEEEEEEEEEESS
T ss_pred CCEEEEEeCCCHHHHHHHHHHHcCCCcEEEEeCCc
Confidence 46899988766667889999999999999955433
No 176
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=62.88 E-value=3.1 Score=30.60 Aligned_cols=54 Identities=11% Similarity=0.018 Sum_probs=35.9
Q ss_pred cccEEEEccChHH------HHHHHHHhccCCCEEEEecCC-CCCccc--ChHHHHhcCcEEEe
Q 034260 4 GIDVSFDCAGLNK------TMSTVLDATRAGDKVCLVGMG-HHDMTV--PLTPAAARYLIYGF 57 (100)
Q Consensus 4 G~D~vie~~G~~~------~~~~al~~l~~gGrvv~vG~~-~~~~~i--~~~~l~~k~~~i~G 57 (100)
++|++|.|+..+. .-++.++.+++|+.++-++.- ++.++. +-..+..+++++.|
T Consensus 275 ~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t~~~~~~~~~GV~~~g 337 (405)
T 4dio_A 275 KQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGAEAGKVTEVGGVRIVG 337 (405)
T ss_dssp TCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTCCTTEEEEETTEEEEE
T ss_pred CCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCccccCCCCeEEECCEEEEE
Confidence 5899999975442 347889999999999999863 233322 11223356777773
No 177
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=61.91 E-value=3.2 Score=27.15 Aligned_cols=33 Identities=12% Similarity=0.148 Sum_probs=24.4
Q ss_pred CcccEEEEc------cChHHHHHHHHHhccCCCEEEEec
Q 034260 3 AGIDVSFDC------AGLNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 3 ~G~D~vie~------~G~~~~~~~al~~l~~gGrvv~vG 35 (100)
..+|+|+-. ......++++.++++|||++++.-
T Consensus 102 ~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 102 EKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp SCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred CCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence 357887742 134567899999999999999863
No 178
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=61.83 E-value=8.7 Score=21.64 Aligned_cols=12 Identities=25% Similarity=0.365 Sum_probs=6.6
Q ss_pred cccEEEEccChH
Q 034260 4 GIDVSFDCAGLN 15 (100)
Q Consensus 4 G~D~vie~~G~~ 15 (100)
++|++++|+|..
T Consensus 69 ~~d~vi~~~~~~ 80 (118)
T 3ic5_A 69 GFDAVISAAPFF 80 (118)
T ss_dssp TCSEEEECSCGG
T ss_pred CCCEEEECCCch
Confidence 355666666543
No 179
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=61.73 E-value=5.2 Score=27.21 Aligned_cols=34 Identities=15% Similarity=0.118 Sum_probs=23.5
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
++|+++|++... +...-++.+...|.-+++|..+
T Consensus 45 ~~DvvIDfT~p~-a~~~~~~~a~~~g~~~VigTTG 78 (245)
T 1p9l_A 45 NTEVVIDFTHPD-VVMGNLEFLIDNGIHAVVGTTG 78 (245)
T ss_dssp TCCEEEECSCTT-THHHHHHHHHHTTCEEEECCCC
T ss_pred CCcEEEEccChH-HHHHHHHHHHHcCCCEEEcCCC
Confidence 589999999764 4555555555566767777654
No 180
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=61.56 E-value=5.7 Score=28.77 Aligned_cols=20 Identities=5% Similarity=0.252 Sum_probs=17.1
Q ss_pred HHHHHHHHhccCCCEEEEec
Q 034260 16 KTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 16 ~~~~~al~~l~~gGrvv~vG 35 (100)
..++.+.+++++||++++..
T Consensus 355 ~~L~~a~~~LkpGG~lvyst 374 (429)
T 1sqg_A 355 EILDAIWPHLKTGGTLVYAT 374 (429)
T ss_dssp HHHHHHGGGEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEEE
Confidence 45788999999999999865
No 181
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=61.45 E-value=7.2 Score=26.20 Aligned_cols=34 Identities=12% Similarity=0.131 Sum_probs=24.6
Q ss_pred CcccEEEEccC--------hHHHHHHHHHhccCCCEEEEecC
Q 034260 3 AGIDVSFDCAG--------LNKTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 3 ~G~D~vie~~G--------~~~~~~~al~~l~~gGrvv~vG~ 36 (100)
..+|+|++..- ....+++..++|+|||+++++..
T Consensus 151 ~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~ 192 (252)
T 2gb4_A 151 GKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVL 192 (252)
T ss_dssp CCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEE
Confidence 35899997532 12467888899999999976643
No 182
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=61.45 E-value=7.9 Score=25.21 Aligned_cols=34 Identities=15% Similarity=0.122 Sum_probs=25.8
Q ss_pred cccEEEEccC------hHHHHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCAG------LNKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~G------~~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
.+|+|+-... ....++++.+.++|||+++++...
T Consensus 87 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 126 (239)
T 1xxl_A 87 SFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHY 126 (239)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 5788876532 246789999999999999987543
No 183
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=61.36 E-value=9.2 Score=27.65 Aligned_cols=26 Identities=23% Similarity=0.254 Sum_probs=20.4
Q ss_pred cccEEEEccChHHHHHHHHHhccCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGD 29 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gG 29 (100)
++|+||+|+|...+.+.+-++++.|-
T Consensus 64 ~~Dvvf~a~~~~~s~~~~~~~~~~G~ 89 (370)
T 3pzr_A 64 QLDAVITCQGGSYTEKVYPALRQAGW 89 (370)
T ss_dssp TCSEEEECSCHHHHHHHHHHHHHTTC
T ss_pred cCCEEEECCChHHHHHHHHHHHHCCC
Confidence 68999999999776766666666664
No 184
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=61.07 E-value=9.8 Score=26.09 Aligned_cols=34 Identities=21% Similarity=0.156 Sum_probs=23.4
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
++|+|+|++.... ...-++.+...|+-+++|..+
T Consensus 72 ~~DvVIDft~p~~-~~~~~~~a~~~G~~vVigTtG 105 (273)
T 1dih_A 72 DFDVFIDFTRPEG-TLNHLAFCRQHGKGMVIGTTG 105 (273)
T ss_dssp SCSEEEECSCHHH-HHHHHHHHHHTTCEEEECCCC
T ss_pred CCCEEEEcCChHH-HHHHHHHHHhCCCCEEEECCC
Confidence 5899999997554 444455555566777787664
No 185
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=60.51 E-value=8 Score=25.19 Aligned_cols=31 Identities=6% Similarity=0.033 Sum_probs=24.7
Q ss_pred cccEEEEccC------hHHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAG------LNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G------~~~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+-... ....++++.+.++|||++++.
T Consensus 104 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 104 SVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp CEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 4788886543 346789999999999999987
No 186
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=60.46 E-value=14 Score=24.48 Aligned_cols=33 Identities=15% Similarity=0.163 Sum_probs=24.6
Q ss_pred CcccEEEEcc---ChHHHHHHHHHhccCCCEEEEec
Q 034260 3 AGIDVSFDCA---GLNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 3 ~G~D~vie~~---G~~~~~~~al~~l~~gGrvv~vG 35 (100)
..+|+|+-.. .....++.+.+++++||.+++-.
T Consensus 155 ~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 155 GSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp TCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred CCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEec
Confidence 3589887433 23467889999999999998754
No 187
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=59.92 E-value=15 Score=24.67 Aligned_cols=23 Identities=9% Similarity=0.078 Sum_probs=19.5
Q ss_pred HHHHHHHHhccCCCEEEEecCCC
Q 034260 16 KTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 16 ~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
..++++.+.|+|||++++.....
T Consensus 164 ~~l~~~~~~LkpgG~l~i~~~~~ 186 (302)
T 3hem_A 164 TFFKKFYNLTPDDGRMLLHTITI 186 (302)
T ss_dssp HHHHHHHHSSCTTCEEEEEEEEC
T ss_pred HHHHHHHHhcCCCcEEEEEEEec
Confidence 67889999999999999876543
No 188
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=59.86 E-value=7.3 Score=25.51 Aligned_cols=33 Identities=12% Similarity=0.188 Sum_probs=24.4
Q ss_pred CcccEEEEccCh---HHHHHHHHHhccCCCEEEEec
Q 034260 3 AGIDVSFDCAGL---NKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 3 ~G~D~vie~~G~---~~~~~~al~~l~~gGrvv~vG 35 (100)
..+|+|+-.... ...++.+.++++|||.+++-.
T Consensus 128 ~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 128 DSYQLVFGQVSPMDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp TCEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred CCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEeC
Confidence 357887754332 346889999999999999743
No 189
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=59.22 E-value=8.5 Score=24.11 Aligned_cols=34 Identities=9% Similarity=-0.003 Sum_probs=25.2
Q ss_pred cccEEEEcc--------ChHHHHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCA--------GLNKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~--------G~~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
.+|+|+-.. .....++++.+.++|||++++.-..
T Consensus 102 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 143 (203)
T 3h2b_A 102 RWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFS 143 (203)
T ss_dssp CEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEcc
Confidence 478777632 3346789999999999999986533
No 190
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=59.07 E-value=8.8 Score=25.70 Aligned_cols=33 Identities=6% Similarity=0.091 Sum_probs=25.0
Q ss_pred cccEEEEccCh------HHHHHHHHHhccCCCEEEEecC
Q 034260 4 GIDVSFDCAGL------NKTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 4 G~D~vie~~G~------~~~~~~al~~l~~gGrvv~vG~ 36 (100)
.+|+|+-.-.. ...++++.+.|+|||++++...
T Consensus 150 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 150 SYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 47887754321 4678999999999999998753
No 191
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=58.90 E-value=9.3 Score=24.20 Aligned_cols=34 Identities=9% Similarity=0.065 Sum_probs=25.8
Q ss_pred cccEEEEccC------hHHHHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCAG------LNKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~G------~~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
.+|+|+-... ....++++.+++++||++++....
T Consensus 106 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 145 (219)
T 3dh0_A 106 TVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWK 145 (219)
T ss_dssp CEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEec
Confidence 4788775433 246789999999999999998543
No 192
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=58.53 E-value=11 Score=24.35 Aligned_cols=35 Identities=9% Similarity=0.030 Sum_probs=25.9
Q ss_pred cccEEEEcc--------ChHHHHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCA--------GLNKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~--------G~~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
.+|+|+... -....++.+.++++|||+++++....
T Consensus 132 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 174 (235)
T 3lcc_A 132 LFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPI 174 (235)
T ss_dssp CEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred CeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecc
Confidence 478887532 22356888999999999999876543
No 193
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=58.21 E-value=11 Score=24.95 Aligned_cols=30 Identities=10% Similarity=-0.156 Sum_probs=22.9
Q ss_pred cccEEE-EccChHHHHHHHHHhccCCCEEEE
Q 034260 4 GIDVSF-DCAGLNKTMSTVLDATRAGDKVCL 33 (100)
Q Consensus 4 G~D~vi-e~~G~~~~~~~al~~l~~gGrvv~ 33 (100)
.+|+|| |+.=....+..++..+++||.+++
T Consensus 122 ~fDlIfIDg~k~~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 122 HPDVVLVDGRFRVGCALATAFSITRPVTLLF 152 (202)
T ss_dssp CCSEEEECSSSHHHHHHHHHHHCSSCEEEEE
T ss_pred CCCEEEEeCCCchhHHHHHHHhcCCCeEEEE
Confidence 478866 654344678889999999999964
No 194
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=58.10 E-value=10 Score=26.03 Aligned_cols=51 Identities=12% Similarity=-0.026 Sum_probs=35.2
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccChHHHHhcCcEEE
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPLTPAAARYLIYG 56 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~~~l~~k~~~i~ 56 (100)
.+|+|+.|++..-.-+..++.+++++.++-++..+...++ .....+..++.
T Consensus 215 ~aDvVi~~~p~~~i~~~~~~~mk~g~~lin~a~g~~~~~~--~~a~~~G~~~i 265 (300)
T 2rir_A 215 DIDICINTIPSMILNQTVLSSMTPKTLILDLASRPGGTDF--KYAEKQGIKAL 265 (300)
T ss_dssp TCSEEEECCSSCCBCHHHHTTSCTTCEEEECSSTTCSBCH--HHHHHHTCEEE
T ss_pred CCCEEEECCChhhhCHHHHHhCCCCCEEEEEeCCCCCcCH--HHHHHCCCEEE
Confidence 5899999998642224577889999999998875444443 44445566654
No 195
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=58.05 E-value=5 Score=26.58 Aligned_cols=33 Identities=9% Similarity=0.238 Sum_probs=25.4
Q ss_pred cccEEEE-----ccChHHHHHHHHHhccCCCEEEEecC
Q 034260 4 GIDVSFD-----CAGLNKTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 4 G~D~vie-----~~G~~~~~~~al~~l~~gGrvv~vG~ 36 (100)
.+|+|+- ..+....++++.++++|||++++...
T Consensus 114 ~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 114 ELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp CEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred CEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEe
Confidence 4788764 23455778999999999999998753
No 196
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=57.89 E-value=17 Score=23.84 Aligned_cols=32 Identities=16% Similarity=0.088 Sum_probs=22.0
Q ss_pred cccEEEEccC---hHHHHHHHHH-hccCCCEEEEec
Q 034260 4 GIDVSFDCAG---LNKTMSTVLD-ATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G---~~~~~~~al~-~l~~gGrvv~vG 35 (100)
.+|+|+-..+ .+..+.++.+ .|++||++++.-
T Consensus 152 ~fD~I~~d~~~~~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 152 AHPLIFIDNAHANTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp CSSEEEEESSCSSHHHHHHHHHHHTCCTTCEEEECS
T ss_pred CCCEEEECCchHhHHHHHHHHHHhhCCCCCEEEEEe
Confidence 4787664333 2345677775 999999999854
No 197
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=57.73 E-value=8.4 Score=24.37 Aligned_cols=33 Identities=15% Similarity=0.173 Sum_probs=24.1
Q ss_pred CcccEEEEcc--------ChHHHHHHHHHhccCCCEEEEec
Q 034260 3 AGIDVSFDCA--------GLNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 3 ~G~D~vie~~--------G~~~~~~~al~~l~~gGrvv~vG 35 (100)
..+|+|+-.. .....++++.+.+++||++++.-
T Consensus 101 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 141 (211)
T 3e23_A 101 DAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASY 141 (211)
T ss_dssp SCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 3578877543 12257788999999999999863
No 198
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=57.36 E-value=8.8 Score=26.57 Aligned_cols=21 Identities=10% Similarity=0.210 Sum_probs=17.8
Q ss_pred HHHHHHHHhccCCCEEEEecC
Q 034260 16 KTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 16 ~~~~~al~~l~~gGrvv~vG~ 36 (100)
..++.+.+++++||++++..-
T Consensus 227 ~~L~~~~~~LkpGG~lv~stc 247 (315)
T 1ixk_A 227 RLLEKGLEVLKPGGILVYSTC 247 (315)
T ss_dssp HHHHHHHHHEEEEEEEEEEES
T ss_pred HHHHHHHHhCCCCCEEEEEeC
Confidence 567889999999999998643
No 199
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=56.96 E-value=11 Score=22.89 Aligned_cols=35 Identities=11% Similarity=0.188 Sum_probs=25.9
Q ss_pred cccEEEEccC------hHHHHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCAG------LNKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G------~~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
.+|+|+-... ....++++.+.+++||++++.....
T Consensus 75 ~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 115 (170)
T 3i9f_A 75 SVDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRK 115 (170)
T ss_dssp CEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred ceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCc
Confidence 4787775432 2357899999999999999986543
No 200
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=56.91 E-value=13 Score=23.20 Aligned_cols=35 Identities=11% Similarity=0.122 Sum_probs=26.2
Q ss_pred cccEEEEccC------hHHHHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCAG------LNKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G------~~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
.+|+|+-.-. ....++++.+.++|||++++.....
T Consensus 111 ~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 111 YADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFG 151 (219)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred cccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccC
Confidence 4788776432 2467899999999999999876444
No 201
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=56.34 E-value=8.2 Score=25.12 Aligned_cols=32 Identities=16% Similarity=0.222 Sum_probs=24.4
Q ss_pred cccEEEEcc------ChHHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDCA------GLNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~------G~~~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|+-.. .....++++.+.++|||++++.-
T Consensus 95 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 95 KADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp CEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence 578887654 23457888889999999999864
No 202
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=56.34 E-value=9.5 Score=28.29 Aligned_cols=20 Identities=5% Similarity=0.169 Sum_probs=16.7
Q ss_pred HHHHHHHHhccCCCEEEEec
Q 034260 16 KTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 16 ~~~~~al~~l~~gGrvv~vG 35 (100)
..++.+.++++|||+++..-
T Consensus 215 ~iL~~a~~~LkpGG~LvYsT 234 (456)
T 3m4x_A 215 EILSSAIKMLKNKGQLIYST 234 (456)
T ss_dssp HHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEEE
Confidence 45788999999999999743
No 203
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=56.20 E-value=12 Score=22.76 Aligned_cols=35 Identities=6% Similarity=0.049 Sum_probs=25.1
Q ss_pred cccEEEEccC-------hHHHHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCAG-------LNKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G-------~~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
.+|+|+-... ....++.+.+.++++|++++.....
T Consensus 119 ~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 119 KYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp CEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred CceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 5788775432 1256788889999999999876543
No 204
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi}
Probab=56.12 E-value=14 Score=23.02 Aligned_cols=34 Identities=24% Similarity=0.208 Sum_probs=25.6
Q ss_pred cccEEEEccChHHHHHHHHHhcc---CCCEEEEecCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATR---AGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~---~gGrvv~vG~~ 37 (100)
|+.++.|.+=+|..++.+++.++ +++|++++-.+
T Consensus 36 g~~vi~DyaHnP~si~a~l~al~~~~~~~riivvf~~ 72 (163)
T 3mvn_A 36 NITVYDDFAHHPTAITATIDALRAKVGQQRILAVLEP 72 (163)
T ss_dssp TEEEEEECCCSHHHHHHHHHHHHHHHTTSCEEEEECC
T ss_pred CcEEEEcCCCCHHHHHHHHHHHHHhcCCCcEEEEECC
Confidence 57789997778888888888887 45787766433
No 205
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=56.04 E-value=5.8 Score=24.90 Aligned_cols=18 Identities=6% Similarity=-0.044 Sum_probs=15.2
Q ss_pred HHHHHHHhccCCCEEEEe
Q 034260 17 TMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 17 ~~~~al~~l~~gGrvv~v 34 (100)
.++.+.++|+|||++++.
T Consensus 136 ~l~~~~~~LkpgG~lv~~ 153 (201)
T 2plw_A 136 ITHFMEQYINIGGTYIVK 153 (201)
T ss_dssp HHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHccCCCEEEEE
Confidence 567788999999999874
No 206
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=55.85 E-value=3.9 Score=28.58 Aligned_cols=23 Identities=9% Similarity=0.290 Sum_probs=19.6
Q ss_pred HHHHHHHHhccCCCEEEEecCCC
Q 034260 16 KTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 16 ~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
..++++.+.|++|||++++....
T Consensus 226 ~~l~~~~~~l~~ggr~~visfhs 248 (301)
T 1m6y_A 226 EFLKKAEDLLNPGGRIVVISFHS 248 (301)
T ss_dssp HHHHHGGGGEEEEEEEEEEESSH
T ss_pred HHHHHHHHhhCCCCEEEEEecCc
Confidence 46788899999999999998664
No 207
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=55.30 E-value=9.1 Score=24.31 Aligned_cols=31 Identities=13% Similarity=0.056 Sum_probs=22.9
Q ss_pred ccEEEEc---cChHHHHHHHHHhccCCCEEEEec
Q 034260 5 IDVSFDC---AGLNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 5 ~D~vie~---~G~~~~~~~al~~l~~gGrvv~vG 35 (100)
+|+|+-. ......++.+.+.+++||.+++-.
T Consensus 127 fD~v~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 127 IDILFMDCDVFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp EEEEEEETTTSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred CCEEEEcCChhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 6777642 233467889999999999998754
No 208
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=55.19 E-value=7.5 Score=26.41 Aligned_cols=31 Identities=23% Similarity=0.355 Sum_probs=23.5
Q ss_pred cccEEEEcc------------ChHHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCA------------GLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~------------G~~~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+-.. +....++.+.++|+|||++++.
T Consensus 177 ~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~ 219 (292)
T 3g07_A 177 EYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLE 219 (292)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 578877544 2334688889999999999985
No 209
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=55.09 E-value=3 Score=28.81 Aligned_cols=32 Identities=22% Similarity=0.289 Sum_probs=25.0
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|+.........+.+.+.++|||++++.-
T Consensus 144 ~fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 144 PYDVIFVTVGVDEVPETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp CEEEEEECSBBSCCCHHHHHHEEEEEEEEEEB
T ss_pred CeEEEEEcCCHHHHHHHHHHhcCCCcEEEEEE
Confidence 57888887665544577889999999999863
No 210
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=55.01 E-value=15 Score=26.59 Aligned_cols=34 Identities=18% Similarity=0.039 Sum_probs=26.9
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
++|+||.|+|...+.+.+-++++.|-+++-.+..
T Consensus 93 ~~Dvvf~alp~~~s~~~~~~~~~~G~~VIDlSa~ 126 (381)
T 3hsk_A 93 ECDVVFSGLDADVAGDIEKSFVEAGLAVVSNAKN 126 (381)
T ss_dssp GCSEEEECCCHHHHHHHHHHHHHTTCEEEECCST
T ss_pred cCCEEEECCChhHHHHHHHHHHhCCCEEEEcCCc
Confidence 6899999999987777777777777777777654
No 211
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=54.90 E-value=23 Score=24.16 Aligned_cols=35 Identities=9% Similarity=0.129 Sum_probs=25.2
Q ss_pred CcccEEEEccCh------H--HHHHHHHHhccCCCEEEEecCC
Q 034260 3 AGIDVSFDCAGL------N--KTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 3 ~G~D~vie~~G~------~--~~~~~al~~l~~gGrvv~vG~~ 37 (100)
.++|+++-..-- . ..++.+.++++|||+++++-..
T Consensus 232 ~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 232 SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 357887753221 1 5678888999999999998644
No 212
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=54.88 E-value=11 Score=25.39 Aligned_cols=31 Identities=13% Similarity=0.113 Sum_probs=22.9
Q ss_pred cccEEEEccChH----HHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLN----KTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~----~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+-....+ ..+..+.+.|+|||+++++
T Consensus 147 ~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 147 GVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp CEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence 468777655544 3577778899999999874
No 213
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=54.75 E-value=9.6 Score=24.42 Aligned_cols=20 Identities=30% Similarity=0.411 Sum_probs=17.2
Q ss_pred HHHHHHHHHhccCCCEEEEe
Q 034260 15 NKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 15 ~~~~~~al~~l~~gGrvv~v 34 (100)
...++++.+.|++||+++++
T Consensus 159 ~~~l~~~~~~LkpgG~l~~~ 178 (230)
T 3evz_A 159 VKLLEEAFDHLNPGGKVALY 178 (230)
T ss_dssp HHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHHHHHHHhCCCeEEEEE
Confidence 45788889999999999986
No 214
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=54.48 E-value=11 Score=23.37 Aligned_cols=33 Identities=12% Similarity=0.189 Sum_probs=23.9
Q ss_pred cccEEEEcc--------ChHHHHHHHHHhccCCCEEEEecC
Q 034260 4 GIDVSFDCA--------GLNKTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 4 G~D~vie~~--------G~~~~~~~al~~l~~gGrvv~vG~ 36 (100)
.+|+|+-.. -....++.+.+.+++||+++++..
T Consensus 97 ~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 97 QYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp CEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 578877542 123568888899999999887653
No 215
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=54.42 E-value=12 Score=23.92 Aligned_cols=32 Identities=16% Similarity=0.332 Sum_probs=24.1
Q ss_pred cccEEEEccC------hHHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDCAG------LNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G------~~~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|+-... ....++.+.+.++|||++++.-
T Consensus 107 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 107 SFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence 4788775432 2457889999999999999753
No 216
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=53.73 E-value=11 Score=24.27 Aligned_cols=35 Identities=6% Similarity=0.228 Sum_probs=25.5
Q ss_pred CcccEEEEccC------hHHHHHHHHHhccCCCEEEEecCC
Q 034260 3 AGIDVSFDCAG------LNKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 3 ~G~D~vie~~G------~~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
..+|+|+-... ....++++.+.++|||++++.-..
T Consensus 115 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 155 (242)
T 3l8d_A 115 EQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAILG 155 (242)
T ss_dssp TCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEcC
Confidence 35788775432 225789999999999999987543
No 217
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=53.68 E-value=6.9 Score=26.25 Aligned_cols=33 Identities=6% Similarity=-0.044 Sum_probs=26.0
Q ss_pred cccEEEEccChH-HHHHHHHHhccCCCEEEEecC
Q 034260 4 GIDVSFDCAGLN-KTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 4 G~D~vie~~G~~-~~~~~al~~l~~gGrvv~vG~ 36 (100)
.+|+|+-....+ ..++.+.+.+++||++++...
T Consensus 179 ~fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 179 MYDAVIADIPDPWNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp CEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred CccEEEEcCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 478888755544 568899999999999998763
No 218
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=53.54 E-value=13 Score=26.97 Aligned_cols=26 Identities=27% Similarity=0.253 Sum_probs=20.3
Q ss_pred cccEEEEccChHHHHHHHHHhccCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGD 29 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gG 29 (100)
++|+||+|+|...+.+.+-++++.|-
T Consensus 68 ~vDvvf~a~~~~~s~~~~~~~~~~G~ 93 (377)
T 3uw3_A 68 KCDVIITCQGGDYTNDVFPKLRAAGW 93 (377)
T ss_dssp TCSEEEECSCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEECCChHHHHHHHHHHHHCCC
Confidence 68999999999776666666666664
No 219
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=53.25 E-value=11 Score=24.92 Aligned_cols=34 Identities=12% Similarity=0.042 Sum_probs=24.2
Q ss_pred CcccEEEEccCh---HHHHHHHHHhccCCCEEEEecC
Q 034260 3 AGIDVSFDCAGL---NKTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 3 ~G~D~vie~~G~---~~~~~~al~~l~~gGrvv~vG~ 36 (100)
..+|+|+-.... ...++.+.+.|+|||.+++--+
T Consensus 135 ~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 135 HQFDFIFIDADKTNYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp SCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred CCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEEEECC
Confidence 357886643332 2458899999999999998543
No 220
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=52.11 E-value=14 Score=23.96 Aligned_cols=32 Identities=13% Similarity=0.076 Sum_probs=23.5
Q ss_pred cccEEEEccC--------hHHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDCAG--------LNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G--------~~~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|+-... ....++++.+.+++||++++.-
T Consensus 146 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 185 (241)
T 2ex4_A 146 SYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKD 185 (241)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 4788775422 1256888899999999999864
No 221
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=51.99 E-value=12 Score=25.93 Aligned_cols=33 Identities=15% Similarity=0.153 Sum_probs=25.0
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
.+|+|++|++.....+.+.++++.| +-+++..+
T Consensus 58 ~~DvViiatp~~~h~~~~~~al~aG-~~Vv~ekp 90 (320)
T 1f06_A 58 DVDVLFLCMGSATDIPEQAPKFAQF-ACTVDTYD 90 (320)
T ss_dssp TCSEEEECSCTTTHHHHHHHHHTTT-SEEECCCC
T ss_pred CCCEEEEcCCcHHHHHHHHHHHHCC-CEEEECCC
Confidence 5899999999876777888888764 55556554
No 222
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=51.90 E-value=11 Score=24.51 Aligned_cols=34 Identities=12% Similarity=0.165 Sum_probs=24.5
Q ss_pred CcccEEEEccCh----------HHHHHHHHHhccCCCEEEEecC
Q 034260 3 AGIDVSFDCAGL----------NKTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 3 ~G~D~vie~~G~----------~~~~~~al~~l~~gGrvv~vG~ 36 (100)
..+|+|+-.... ...++++.++|+|||++++...
T Consensus 156 ~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 156 PPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp CCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 357888864321 2457778889999999998763
No 223
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=51.89 E-value=23 Score=24.30 Aligned_cols=31 Identities=16% Similarity=0.252 Sum_probs=24.4
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|++|++.....+.+.++++. |+-|++-
T Consensus 65 ~~DvViiatp~~~h~~~~~~al~a-G~~Vi~e 95 (304)
T 3bio_A 65 SVDVALVCSPSREVERTALEILKK-GICTADS 95 (304)
T ss_dssp SCCEEEECSCHHHHHHHHHHHHTT-TCEEEEC
T ss_pred CCCEEEECCCchhhHHHHHHHHHc-CCeEEEC
Confidence 589999999998888888887776 5555554
No 224
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=51.51 E-value=7.1 Score=28.43 Aligned_cols=53 Identities=9% Similarity=0.032 Sum_probs=34.9
Q ss_pred cccEEEEccChHH------HHHHHHHhccCCCEEEEecCCCC-Ccc--cChHHHHhcCcEEE
Q 034260 4 GIDVSFDCAGLNK------TMSTVLDATRAGDKVCLVGMGHH-DMT--VPLTPAAARYLIYG 56 (100)
Q Consensus 4 G~D~vie~~G~~~------~~~~al~~l~~gGrvv~vG~~~~-~~~--i~~~~l~~k~~~i~ 56 (100)
++|+||.|+..+. .-++.++.+++|+.++-++...+ .++ -+-.....+++++.
T Consensus 265 ~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e~t~~~~~~~~~gV~~~ 326 (381)
T 3p2y_A 265 KFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNCELTEPGRTIVHHGVTIT 326 (381)
T ss_dssp TCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTCEEEETTEEEE
T ss_pred cCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCccccccCCCeEEECCEEEE
Confidence 6899999974432 24788999999999999986543 222 12112334567776
No 225
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=51.35 E-value=9.6 Score=25.42 Aligned_cols=34 Identities=12% Similarity=0.142 Sum_probs=24.9
Q ss_pred CcccEEEEccC--------hHHHHHHHHHhccCCCEEEEecC
Q 034260 3 AGIDVSFDCAG--------LNKTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 3 ~G~D~vie~~G--------~~~~~~~al~~l~~gGrvv~vG~ 36 (100)
+.+|+|+-..- ....++.+.+.+++||+++++..
T Consensus 183 ~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 183 ENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp SCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 35788886431 22578889999999999877654
No 226
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=51.29 E-value=9.8 Score=24.64 Aligned_cols=31 Identities=6% Similarity=0.057 Sum_probs=22.6
Q ss_pred cccEEEEccChH----HHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLN----KTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~----~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+-....+ ..++++.+.|+|||+++++
T Consensus 126 ~fD~V~~~~~~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 126 KVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceeEEEEeccChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 478877654322 1267888999999999987
No 227
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=51.21 E-value=10 Score=23.86 Aligned_cols=35 Identities=9% Similarity=0.085 Sum_probs=25.9
Q ss_pred cccEEEEccC-----hHHHHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCAG-----LNKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G-----~~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
.+|+|+-.-. ....++.+.+.++|||++++.-...
T Consensus 116 ~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 155 (227)
T 3e8s_A 116 DYDLICANFALLHQDIIELLSAMRTLLVPGGALVIQTLHP 155 (227)
T ss_dssp CEEEEEEESCCCSSCCHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CccEEEECchhhhhhHHHHHHHHHHHhCCCeEEEEEecCc
Confidence 3788775422 3468899999999999999876543
No 228
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=51.07 E-value=15 Score=23.27 Aligned_cols=34 Identities=12% Similarity=0.282 Sum_probs=25.1
Q ss_pred cccEEEEccC-----hHHHHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCAG-----LNKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~G-----~~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
.+|+|+-... ....++++.+.+++||++++.-..
T Consensus 115 ~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 153 (215)
T 2zfu_A 115 SVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVS 153 (215)
T ss_dssp CEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred CEeEEEEehhccccCHHHHHHHHHHhCCCCeEEEEEEcC
Confidence 4688775432 246788999999999999987543
No 229
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=50.76 E-value=13 Score=24.33 Aligned_cols=32 Identities=19% Similarity=0.191 Sum_probs=24.0
Q ss_pred cccEEEEccC---hHHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDCAG---LNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G---~~~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|+-... ....++.+.+++++||.+++--
T Consensus 147 ~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 147 SYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp CEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEec
Confidence 5788775433 2356889999999999998754
No 230
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=50.58 E-value=15 Score=24.76 Aligned_cols=22 Identities=5% Similarity=0.113 Sum_probs=17.9
Q ss_pred HHHHHHHHHhccCCCEEEEecC
Q 034260 15 NKTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 15 ~~~~~~al~~l~~gGrvv~vG~ 36 (100)
...++.+.+++++||++++.--
T Consensus 191 ~~~l~~~~~~LkpgG~lv~stc 212 (274)
T 3ajd_A 191 KELIDIGIDLLKKDGELVYSTC 212 (274)
T ss_dssp HHHHHHHHHHEEEEEEEEEEES
T ss_pred HHHHHHHHHhCCCCCEEEEEEC
Confidence 3568888999999999998643
No 231
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=50.54 E-value=15 Score=27.20 Aligned_cols=20 Identities=15% Similarity=0.326 Sum_probs=16.7
Q ss_pred HHHHHHHHhccCCCEEEEec
Q 034260 16 KTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 16 ~~~~~al~~l~~gGrvv~vG 35 (100)
..++.+.+++++||++++..
T Consensus 227 ~iL~~a~~~LkpGG~LvysT 246 (479)
T 2frx_A 227 ELIDSAFHALRPGGTLVYST 246 (479)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEec
Confidence 35778889999999999864
No 232
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=50.38 E-value=12 Score=26.80 Aligned_cols=34 Identities=12% Similarity=0.059 Sum_probs=24.2
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
++|+||.|+|...+.+.+-++ +.|.+++-++...
T Consensus 80 ~~DvVf~alg~~~s~~~~~~~-~~G~~vIDlSa~~ 113 (352)
T 2nqt_A 80 GHDAVFLALPHGHSAVLAQQL-SPETLIIDCGADF 113 (352)
T ss_dssp TCSEEEECCTTSCCHHHHHHS-CTTSEEEECSSTT
T ss_pred CCCEEEECCCCcchHHHHHHH-hCCCEEEEECCCc
Confidence 689999999986555555555 6677777666543
No 233
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=50.27 E-value=14 Score=23.62 Aligned_cols=29 Identities=10% Similarity=0.126 Sum_probs=24.6
Q ss_pred cEEEEccChHHHHHHHHHhccCCCEEEEe
Q 034260 6 DVSFDCAGLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 6 D~vie~~G~~~~~~~al~~l~~gGrvv~v 34 (100)
-+++|++|.+.-++..+++++|.|-+-++
T Consensus 121 ~~~ie~tg~~~ki~~~~~~l~~~gi~e~~ 149 (165)
T 2pc6_A 121 LYTIELTGTRSKLDGFLQAVDCNLILEIA 149 (165)
T ss_dssp EEEEEEEECHHHHHHHHHHSCGGGEEEEE
T ss_pred EEEEEEcCCHHHHHHHHHHhhhcCCEEEE
Confidence 36899999999999999999998855444
No 234
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=49.99 E-value=15 Score=24.72 Aligned_cols=35 Identities=14% Similarity=0.196 Sum_probs=26.4
Q ss_pred CcccEEEEccC-----hHHHHHHHHHhccCCCEEEEecCC
Q 034260 3 AGIDVSFDCAG-----LNKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 3 ~G~D~vie~~G-----~~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
+.+|+|+-... ....++++.+.|+|||++++....
T Consensus 112 ~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 151 (299)
T 3g5t_A 112 QKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAIWGYA 151 (299)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEEEecC
Confidence 35788876543 256889999999999999986543
No 235
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=49.86 E-value=16 Score=22.94 Aligned_cols=34 Identities=12% Similarity=0.177 Sum_probs=24.9
Q ss_pred cccEEEEccC------hHHHHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCAG------LNKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~G------~~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
.+|+|+-... ....++++.+.++|||++++.-..
T Consensus 95 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 95 SFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp CEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecC
Confidence 4677775322 245788999999999999987544
No 236
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=49.85 E-value=15 Score=24.21 Aligned_cols=32 Identities=13% Similarity=0.379 Sum_probs=24.4
Q ss_pred cccEEEEcc------ChHHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDCA------GLNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~------G~~~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|+-.. .....++++.++++|||++++.-
T Consensus 105 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 105 SFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 578877542 23467899999999999999864
No 237
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=49.76 E-value=26 Score=22.53 Aligned_cols=33 Identities=6% Similarity=-0.048 Sum_probs=24.4
Q ss_pred cccEEEEc-----cCh---HHHHHHHHHhccCCCEEEEecC
Q 034260 4 GIDVSFDC-----AGL---NKTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 4 G~D~vie~-----~G~---~~~~~~al~~l~~gGrvv~vG~ 36 (100)
.+|+|+-. .+. ...++++.+.++|||++++.-.
T Consensus 101 ~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (240)
T 3dli_A 101 YLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESP 141 (240)
T ss_dssp CBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEE
T ss_pred CeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence 57887753 222 3678999999999999997643
No 238
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=49.69 E-value=9.4 Score=25.75 Aligned_cols=35 Identities=20% Similarity=0.351 Sum_probs=26.5
Q ss_pred cccEEEEccC-----hHHHHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCAG-----LNKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G-----~~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
.+|+|+-+.. .+..+.++.+.|+|||+++++....
T Consensus 99 sfD~v~~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~~~~~ 138 (257)
T 4hg2_A 99 SVDVAIAAQAMHWFDLDRFWAELRRVARPGAVFAAVTYGL 138 (257)
T ss_dssp CEEEEEECSCCTTCCHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred cccEEEEeeehhHhhHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 4677775432 3467899999999999999987543
No 239
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=49.47 E-value=9 Score=25.71 Aligned_cols=27 Identities=15% Similarity=0.150 Sum_probs=18.1
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCE
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDK 30 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGr 30 (100)
++|+|++|++..++-....+.++..|+
T Consensus 121 ~~DvVi~~~d~~~~~~~l~~~~~~~~~ 147 (249)
T 1jw9_B 121 EHDLVLDCTDNVAVRNQLNAGCFAAKV 147 (249)
T ss_dssp TSSEEEECCSSHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCCHHHHHHHHHHHHHcCC
Confidence 589999999988765444444444343
No 240
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=49.26 E-value=9.6 Score=24.73 Aligned_cols=18 Identities=6% Similarity=0.135 Sum_probs=15.7
Q ss_pred HHHHHHHhccCCCEEEEe
Q 034260 17 TMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 17 ~~~~al~~l~~gGrvv~v 34 (100)
.++++.+.|+|||+++++
T Consensus 152 ~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 152 IKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp HHHTHHHHEEEEEEEEEC
T ss_pred HHHHHHHhcCCCeEEEEE
Confidence 378889999999999876
No 241
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=48.85 E-value=12 Score=26.70 Aligned_cols=24 Identities=8% Similarity=0.155 Sum_probs=20.0
Q ss_pred HHHHHHHHhccCCCEEEEecCCCC
Q 034260 16 KTMSTVLDATRAGDKVCLVGMGHH 39 (100)
Q Consensus 16 ~~~~~al~~l~~gGrvv~vG~~~~ 39 (100)
..++++.+.+++||++++++....
T Consensus 315 ~~l~~~~~~LkpgG~l~iv~n~~~ 338 (375)
T 4dcm_A 315 EMFHHARRCLKINGELYIVANRHL 338 (375)
T ss_dssp HHHHHHHHHEEEEEEEEEEEETTS
T ss_pred HHHHHHHHhCCCCcEEEEEEECCc
Confidence 468899999999999999875543
No 242
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=48.71 E-value=20 Score=22.90 Aligned_cols=26 Identities=19% Similarity=0.243 Sum_probs=23.0
Q ss_pred cEEEEccChHHHHHHHHHhccCCCEE
Q 034260 6 DVSFDCAGLNKTMSTVLDATRAGDKV 31 (100)
Q Consensus 6 D~vie~~G~~~~~~~al~~l~~gGrv 31 (100)
-+++|++|.+.-++..+++++|.|.+
T Consensus 120 ~~~ie~tg~~~ki~~~~~~l~~~g~i 145 (164)
T 2f1f_A 120 LYTVQLAGTSGKLDAFLASIRDVAKI 145 (164)
T ss_dssp EEEEEEEECHHHHHHHHHHHTTTSEE
T ss_pred EEEEEEeCCHHHHHHHHHHHHhcCCE
Confidence 36899999999999999999999943
No 243
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=48.56 E-value=18 Score=24.12 Aligned_cols=22 Identities=14% Similarity=0.270 Sum_probs=18.0
Q ss_pred hHHHHHHHHHhccCCCEEEEec
Q 034260 14 LNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 14 ~~~~~~~al~~l~~gGrvv~vG 35 (100)
....++.+.++|+++|+++++-
T Consensus 149 ~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 149 FEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEEEE
Confidence 3456888899999999999863
No 244
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=48.37 E-value=6.3 Score=27.28 Aligned_cols=33 Identities=9% Similarity=-0.069 Sum_probs=25.0
Q ss_pred cccEEEEccChH-HHHHHHHHhccCCCEEEEecC
Q 034260 4 GIDVSFDCAGLN-KTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 4 G~D~vie~~G~~-~~~~~al~~l~~gGrvv~vG~ 36 (100)
.+|+|+-....+ ..++++.+.|+|||++++...
T Consensus 187 ~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 187 TFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp -EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred CeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 478887655544 458899999999999997653
No 245
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=48.01 E-value=12 Score=23.97 Aligned_cols=31 Identities=13% Similarity=0.170 Sum_probs=21.9
Q ss_pred CcccEEEEcc----------ChHHHHHHHHHhccCCCEEEE
Q 034260 3 AGIDVSFDCA----------GLNKTMSTVLDATRAGDKVCL 33 (100)
Q Consensus 3 ~G~D~vie~~----------G~~~~~~~al~~l~~gGrvv~ 33 (100)
..+|+|+-.. .....++++.++++|||++++
T Consensus 95 ~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 135 (243)
T 3d2l_A 95 EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLF 135 (243)
T ss_dssp SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 3578887532 112467888899999999986
No 246
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=47.96 E-value=17 Score=22.91 Aligned_cols=32 Identities=16% Similarity=0.115 Sum_probs=23.3
Q ss_pred cccEEEEccC--------hHHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDCAG--------LNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G--------~~~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|+-... ....++.+.+.+++||++++.-
T Consensus 103 ~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 142 (227)
T 1ve3_A 103 TFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYF 142 (227)
T ss_dssp CEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 4787775432 1246788889999999999874
No 247
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=47.95 E-value=27 Score=23.42 Aligned_cols=32 Identities=13% Similarity=0.134 Sum_probs=22.3
Q ss_pred cccEEEEccChHHHHHHHH-------HhccCCCEEEEec
Q 034260 4 GIDVSFDCAGLNKTMSTVL-------DATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al-------~~l~~gGrvv~vG 35 (100)
.+|+|+.|++.+..+++.+ ..++++..++.++
T Consensus 61 ~~D~vi~~v~~~~~~~~~~~~~~~l~~~l~~~~~vv~~s 99 (299)
T 1vpd_A 61 QCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMS 99 (299)
T ss_dssp HCSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHhCcchHhhcCCCCCEEEECC
Confidence 4799999999766666555 4566776665554
No 248
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=47.95 E-value=11 Score=27.84 Aligned_cols=32 Identities=13% Similarity=0.259 Sum_probs=24.7
Q ss_pred cccEEEEccCh-----HHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDCAGL-----NKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G~-----~~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|+..... ...++++.+.|+|||.+++.-
T Consensus 288 sFDlVisdgsH~~~d~~~aL~el~rvLKPGGvlVi~D 324 (419)
T 3sso_A 288 PFDIVIDDGSHINAHVRTSFAALFPHVRPGGLYVIED 324 (419)
T ss_dssp CEEEEEECSCCCHHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CccEEEECCcccchhHHHHHHHHHHhcCCCeEEEEEe
Confidence 58999875432 246888889999999999863
No 249
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=47.87 E-value=17 Score=23.40 Aligned_cols=32 Identities=9% Similarity=-0.049 Sum_probs=23.6
Q ss_pred cccEEEEccC--------hHHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDCAG--------LNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G--------~~~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|+-.-. ....++.+.+.++|||++++.-
T Consensus 158 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 158 TYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 4687775322 2356788899999999999875
No 250
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=47.81 E-value=13 Score=22.75 Aligned_cols=32 Identities=9% Similarity=0.123 Sum_probs=23.4
Q ss_pred cccEEEEccC---------hHHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDCAG---------LNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G---------~~~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|+-.-. ....++.+.+.++++|++++.-
T Consensus 107 ~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~ 147 (195)
T 3cgg_A 107 DFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGF 147 (195)
T ss_dssp CEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 5788886411 1356788889999999998754
No 251
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=47.69 E-value=18 Score=25.40 Aligned_cols=29 Identities=17% Similarity=0.297 Sum_probs=20.9
Q ss_pred cccEEEEccChH----HHHHHHHHhccCCCEEE
Q 034260 4 GIDVSFDCAGLN----KTMSTVLDATRAGDKVC 32 (100)
Q Consensus 4 G~D~vie~~G~~----~~~~~al~~l~~gGrvv 32 (100)
.+|+|+||++.. ...+.+.++++.|=.++
T Consensus 86 ~iDvVv~~t~~~~~~~~~~~~~~~AL~aGkhVv 118 (331)
T 3c8m_A 86 DFDIVVDATPASADGKKELAFYKETFENGKDVV 118 (331)
T ss_dssp SCSEEEECSCCCSSSHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEECCCCCCccchHHHHHHHHHHCCCeEE
Confidence 579999999984 56667777777654444
No 252
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=47.55 E-value=13 Score=28.09 Aligned_cols=28 Identities=7% Similarity=0.135 Sum_probs=19.7
Q ss_pred cChHHHHHHHHHhccCCCEEEEecCCCC
Q 034260 12 AGLNKTMSTVLDATRAGDKVCLVGMGHH 39 (100)
Q Consensus 12 ~G~~~~~~~al~~l~~gGrvv~vG~~~~ 39 (100)
+|+++.+.-.+.+++||.+|.-+....+
T Consensus 128 SGs~AN~avy~All~PGD~ilg~~l~~G 155 (490)
T 3ou5_A 128 SGSPANLAVYTALLQPHDRIMGLDLPDG 155 (490)
T ss_dssp SHHHHHHHHHHHHCC-CCCEECBC----
T ss_pred CHHHHHHHHHHHHcCCCCEEEecccCCC
Confidence 7888888888899999999886665543
No 253
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=47.55 E-value=8.9 Score=24.48 Aligned_cols=21 Identities=24% Similarity=0.341 Sum_probs=16.5
Q ss_pred HHHHHHHHhccCCCEEEEecC
Q 034260 16 KTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 16 ~~~~~al~~l~~gGrvv~vG~ 36 (100)
..++.+.++|+|||++++.=.
T Consensus 120 ~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 120 RVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp HHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHccCCCEEEEEEc
Confidence 356778899999999986543
No 254
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=47.52 E-value=17 Score=24.01 Aligned_cols=32 Identities=13% Similarity=0.101 Sum_probs=23.0
Q ss_pred cccEEEEccCh----------HHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDCAGL----------NKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G~----------~~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|+-.-.. ...++.+.+.++|||++++.-
T Consensus 133 ~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 133 EFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp CEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 57888754221 246788889999999999764
No 255
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=47.35 E-value=17 Score=24.06 Aligned_cols=29 Identities=3% Similarity=0.089 Sum_probs=24.6
Q ss_pred cEEEEccChHHHHHHHHHhccCCCEEEEe
Q 034260 6 DVSFDCAGLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 6 D~vie~~G~~~~~~~al~~l~~gGrvv~v 34 (100)
-+++|++|.+.-++..+++++|.|-+-++
T Consensus 147 s~~iE~tG~~~ki~a~i~~l~~~gi~E~~ 175 (193)
T 2fgc_A 147 GAIIEITGARSKVEAFINLLPQKQVEEIA 175 (193)
T ss_dssp EEEEEEEECHHHHHHHHHHSCGGGEEEEE
T ss_pred EEEEEEcCCHHHHHHHHHHhhhhCCEEEE
Confidence 36899999999999999999998855544
No 256
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=47.25 E-value=13 Score=24.40 Aligned_cols=32 Identities=3% Similarity=-0.109 Sum_probs=23.2
Q ss_pred CcccEEEEccC------h----HHHHHHHHHhccCCCEEEEe
Q 034260 3 AGIDVSFDCAG------L----NKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 3 ~G~D~vie~~G------~----~~~~~~al~~l~~gGrvv~v 34 (100)
..+|+|+-.-+ . ...++.+.+.|+|||++++-
T Consensus 109 ~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 109 RRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp CCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 35788886532 1 13578888999999999985
No 257
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=46.97 E-value=15 Score=23.70 Aligned_cols=31 Identities=16% Similarity=0.162 Sum_probs=22.4
Q ss_pred cccEEEEccChH-H---HHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLN-K---TMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~-~---~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+-....+ . .+.++.+.++|||++++.
T Consensus 147 ~~D~V~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 147 MVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp CEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEEEEcCCCccHHHHHHHHHHHHcCCCeEEEEE
Confidence 578887654433 1 266788999999999983
No 258
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=46.84 E-value=15 Score=23.82 Aligned_cols=33 Identities=15% Similarity=-0.041 Sum_probs=23.2
Q ss_pred CcccEEEEccC---hHHHHHHHHHhccCCCEEEEec
Q 034260 3 AGIDVSFDCAG---LNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 3 ~G~D~vie~~G---~~~~~~~al~~l~~gGrvv~vG 35 (100)
..+|+|+-... ....++.+.+.++|||.+++-.
T Consensus 141 ~~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 141 KVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp SCEEEEEEETTSSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCccEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEee
Confidence 35788764322 2356788889999999998743
No 259
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=46.76 E-value=18 Score=23.44 Aligned_cols=32 Identities=6% Similarity=0.125 Sum_probs=24.0
Q ss_pred CcccEEEEccC------hHHHHHHHHHhccCCCEEEEe
Q 034260 3 AGIDVSFDCAG------LNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 3 ~G~D~vie~~G------~~~~~~~al~~l~~gGrvv~v 34 (100)
..+|+|+-+.. ....++++.+.|+|||++++.
T Consensus 107 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 107 DAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEE
Confidence 35788775432 246788999999999999985
No 260
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=46.75 E-value=20 Score=25.25 Aligned_cols=35 Identities=6% Similarity=0.064 Sum_probs=24.9
Q ss_pred cccEEEEcc-----ChHHHHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCA-----GLNKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~-----G~~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
.+|+|+-.. +....++.+.+++++||+++++....
T Consensus 241 ~fD~Vi~~~p~~~~~~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 241 KFDTFITDPPETLEAIRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp CBSEEEECCCSSHHHHHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred CccEEEECCCCchHHHHHHHHHHHHHcccCCeEEEEEEec
Confidence 589888632 22356789999999999876666554
No 261
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=46.52 E-value=35 Score=21.56 Aligned_cols=21 Identities=5% Similarity=0.033 Sum_probs=17.8
Q ss_pred HHHHHHHHHhccCCCEEEEec
Q 034260 15 NKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 15 ~~~~~~al~~l~~gGrvv~vG 35 (100)
...++++.+.+++||++++..
T Consensus 136 ~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 136 KTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp HHHHHHHHHHSCTTCEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEe
Confidence 357899999999999998854
No 262
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=46.52 E-value=19 Score=25.23 Aligned_cols=34 Identities=12% Similarity=0.193 Sum_probs=23.8
Q ss_pred cccEEEEccChHH------------------HHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCAGLNK------------------TMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~G~~~------------------~~~~al~~l~~gGrvv~vG~~ 37 (100)
++|+|++|+|.+. .+-..+.-..|.+.+++++.+
T Consensus 78 ~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNP 129 (315)
T 3tl2_A 78 DSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNP 129 (315)
T ss_dssp TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCCh
Confidence 6899999998652 223344444799999988854
No 263
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=46.46 E-value=25 Score=21.71 Aligned_cols=31 Identities=6% Similarity=0.127 Sum_probs=20.8
Q ss_pred cccEEEEccChHHHHHHHHHhccC---CCEEEEe
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRA---GDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~---gGrvv~v 34 (100)
++|+++.|++.......++..++. ..+++..
T Consensus 105 ~ad~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 105 HVKLVLLAMPHHQGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp CCCEEEECCSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHHCCCCEEEEE
Confidence 689999999987665555555544 4466554
No 264
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=46.36 E-value=27 Score=24.05 Aligned_cols=33 Identities=21% Similarity=0.230 Sum_probs=21.4
Q ss_pred cccEEEEccChH---------------HHHHHHHH---hccCCCEEEEecC
Q 034260 4 GIDVSFDCAGLN---------------KTMSTVLD---ATRAGDKVCLVGM 36 (100)
Q Consensus 4 G~D~vie~~G~~---------------~~~~~al~---~l~~gGrvv~vG~ 36 (100)
++|+|+.|+|.+ +.+.+..+ -..|.+.+++++.
T Consensus 69 ~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tN 119 (310)
T 1guz_A 69 NSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSN 119 (310)
T ss_dssp TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCS
T ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 689999999754 12223322 2368899888754
No 265
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=46.08 E-value=32 Score=23.67 Aligned_cols=33 Identities=12% Similarity=0.140 Sum_probs=18.6
Q ss_pred cccEEEEccChHHH------------------HHHHHHhccCCCEEEEecC
Q 034260 4 GIDVSFDCAGLNKT------------------MSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 4 G~D~vie~~G~~~~------------------~~~al~~l~~gGrvv~vG~ 36 (100)
++|+|+.|+|.+.. +-..++-..|++.++++..
T Consensus 67 ~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tN 117 (304)
T 2v6b_A 67 DAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSN 117 (304)
T ss_dssp TCSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSS
T ss_pred CCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence 68999999986531 1223333368888777543
No 266
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=45.79 E-value=43 Score=20.83 Aligned_cols=34 Identities=15% Similarity=0.364 Sum_probs=23.9
Q ss_pred cccEEEEccChH--------HHHHHHHHhccC--CCEEEEecCC
Q 034260 4 GIDVSFDCAGLN--------KTMSTVLDATRA--GDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~G~~--------~~~~~al~~l~~--gGrvv~vG~~ 37 (100)
++|+||.|+|.. ......+++++. .++++.++..
T Consensus 61 ~~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~ 104 (221)
T 3ew7_A 61 DQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGA 104 (221)
T ss_dssp TCSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred CCCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEecc
Confidence 689999999864 234555666654 4789988754
No 267
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=45.49 E-value=19 Score=23.86 Aligned_cols=33 Identities=18% Similarity=0.188 Sum_probs=24.4
Q ss_pred CcccEEEEccC------hHHHHHHHHHhccCCCEEEEec
Q 034260 3 AGIDVSFDCAG------LNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 3 ~G~D~vie~~G------~~~~~~~al~~l~~gGrvv~vG 35 (100)
..+|+|+-... ....++++.++|+|||++++.-
T Consensus 135 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 135 TPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMF 173 (285)
T ss_dssp SCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEE
Confidence 35788775422 2367899999999999999864
No 268
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=44.93 E-value=15 Score=22.98 Aligned_cols=34 Identities=6% Similarity=0.297 Sum_probs=24.1
Q ss_pred cccEEEEccC--------hHHHHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCAG--------LNKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~G--------~~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
.+|+|+-... ....++++.+.++|||++++.-..
T Consensus 89 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 89 SMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLT 130 (209)
T ss_dssp CEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 4788875321 124678888999999999986543
No 269
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=44.79 E-value=24 Score=24.26 Aligned_cols=34 Identities=18% Similarity=0.074 Sum_probs=22.1
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
.+|++||++....+.+.+..++ ..|.-+++|..+
T Consensus 73 ~~DVVIDfT~p~a~~~~~~~al-~~G~~vVigTTG 106 (272)
T 4f3y_A 73 EADYLIDFTLPEGTLVHLDAAL-RHDVKLVIGTTG 106 (272)
T ss_dssp HCSEEEECSCHHHHHHHHHHHH-HHTCEEEECCCC
T ss_pred CCCEEEEcCCHHHHHHHHHHHH-HcCCCEEEECCC
Confidence 4799999998655555444444 455556677654
No 270
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=44.35 E-value=12 Score=26.75 Aligned_cols=29 Identities=7% Similarity=-0.123 Sum_probs=21.1
Q ss_pred ccEEEEccChHHHHHHHHHhccCCCEEEEe
Q 034260 5 IDVSFDCAGLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 5 ~D~vie~~G~~~~~~~al~~l~~gGrvv~v 34 (100)
.|+|+||++.........++++.| +-|++
T Consensus 85 ~DvVV~~t~~~~~a~~~~~AL~aG-khVVt 113 (358)
T 1ebf_A 85 PVILVDNTSSAYIAGFYTKFVENG-ISIAT 113 (358)
T ss_dssp CEEEEECSCCHHHHTTHHHHHHTT-CEEEC
T ss_pred CcEEEEcCCChHHHHHHHHHHHCC-CeEEe
Confidence 489999999887777777777655 44443
No 271
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=44.05 E-value=17 Score=21.81 Aligned_cols=35 Identities=20% Similarity=0.214 Sum_probs=22.2
Q ss_pred cccEEEEcc----ChHHHHHHHH--HhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCA----GLNKTMSTVL--DATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~----G~~~~~~~al--~~l~~gGrvv~vG~~~ 38 (100)
.+|+|+-.. -.+..++... +.++++|++++.-...
T Consensus 110 ~~D~i~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 110 RFTVAFMAPPYAMDLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp CEEEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred ceEEEEECCCCchhHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 477777542 1234555655 7889999988765443
No 272
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=43.67 E-value=21 Score=24.53 Aligned_cols=35 Identities=11% Similarity=0.192 Sum_probs=25.1
Q ss_pred CcccEEEEcc-----Ch---HHHHHHHHHhccCCCEEEEecCC
Q 034260 3 AGIDVSFDCA-----GL---NKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 3 ~G~D~vie~~-----G~---~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
.++|+++-.- .. ...++.+.++++|||+++++-..
T Consensus 247 ~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (352)
T 3mcz_A 247 GAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMT 289 (352)
T ss_dssp CCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 3578877532 21 35678888999999999998644
No 273
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=43.63 E-value=26 Score=24.40 Aligned_cols=34 Identities=9% Similarity=0.079 Sum_probs=22.0
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
.+|++||++....+.+.+..+++ .|.-+++|..+
T Consensus 88 ~aDVvIDFT~p~a~~~~~~~~l~-~Gv~vViGTTG 121 (288)
T 3ijp_A 88 NTEGILDFSQPQASVLYANYAAQ-KSLIHIIGTTG 121 (288)
T ss_dssp SCSEEEECSCHHHHHHHHHHHHH-HTCEEEECCCC
T ss_pred CCCEEEEcCCHHHHHHHHHHHHH-cCCCEEEECCC
Confidence 58999999976555554444444 45556666544
No 274
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=43.31 E-value=40 Score=22.46 Aligned_cols=51 Identities=8% Similarity=0.068 Sum_probs=28.2
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccChHHHHhc-CcEE
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPLTPAAAR-YLIY 55 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~~~l~~k-~~~i 55 (100)
++|+||-|++.+.. +..+...++.|..|.+.-.+...++-+..++.+ .++|
T Consensus 91 ~adLVIaAT~d~~~-N~~I~~~ak~gi~VNvvD~p~~~~f~~Paiv~rg~l~i 142 (223)
T 3dfz_A 91 NVFFIVVATNDQAV-NKFVKQHIKNDQLVNMASSFSDGNIQIPAQFSRGRLSL 142 (223)
T ss_dssp SCSEEEECCCCTHH-HHHHHHHSCTTCEEEC-----CCSEECCEEEEETTEEE
T ss_pred CCCEEEECCCCHHH-HHHHHHHHhCCCEEEEeCCcccCeEEEeeEEEeCCEEE
Confidence 68999999998754 444444444787776654443344444344444 4444
No 275
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=43.19 E-value=18 Score=24.12 Aligned_cols=33 Identities=12% Similarity=0.038 Sum_probs=23.7
Q ss_pred CcccEEEEcc-C-hHHHHHHHHHhccCCCEEEEec
Q 034260 3 AGIDVSFDCA-G-LNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 3 ~G~D~vie~~-G-~~~~~~~al~~l~~gGrvv~vG 35 (100)
..+|+|+-.+ . .+..++.+.+.+++||+++++-
T Consensus 150 ~~fD~I~s~a~~~~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 150 EAYARAVARAVAPLCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp TCEEEEEEESSCCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCceEEEECCcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence 3578877532 2 2456788889999999998764
No 276
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=43.14 E-value=23 Score=23.52 Aligned_cols=21 Identities=10% Similarity=0.213 Sum_probs=17.8
Q ss_pred hHHHHHHHHHhccCCCEEEEe
Q 034260 14 LNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 14 ~~~~~~~al~~l~~gGrvv~v 34 (100)
....++++.+.|+|||++++.
T Consensus 154 ~~~~l~~~~~~LkpgG~l~~~ 174 (293)
T 3thr_A 154 HRLALKNIASMVRPGGLLVID 174 (293)
T ss_dssp HHHHHHHHHHTEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCeEEEEE
Confidence 346789999999999999875
No 277
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=43.04 E-value=19 Score=22.87 Aligned_cols=32 Identities=16% Similarity=0.060 Sum_probs=23.5
Q ss_pred cccEEEEcc------ChHHHHHHHH-HhccCCCEEEEec
Q 034260 4 GIDVSFDCA------GLNKTMSTVL-DATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~------G~~~~~~~al-~~l~~gGrvv~vG 35 (100)
.+|+|+-.- .....++++. +.++|||++++.-
T Consensus 103 ~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 103 RYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp CEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEc
Confidence 467776432 2345788888 9999999999865
No 278
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=42.24 E-value=24 Score=23.30 Aligned_cols=32 Identities=16% Similarity=0.228 Sum_probs=23.9
Q ss_pred cccEEEEccC------hHHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDCAG------LNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G------~~~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|+-... ....++++.+.++|||++++.-
T Consensus 117 ~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 117 PLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEF 154 (279)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEe
Confidence 4788775432 2357899999999999999754
No 279
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=42.09 E-value=22 Score=24.44 Aligned_cols=31 Identities=16% Similarity=0.148 Sum_probs=22.5
Q ss_pred cccEEEEc---------cChHHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDC---------AGLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~---------~G~~~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+-. --....++.+.++|+|||++++.
T Consensus 129 ~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~ 168 (302)
T 2vdw_A 129 KFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLIT 168 (302)
T ss_dssp CEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 47877632 12246789999999999999764
No 280
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=42.04 E-value=12 Score=25.13 Aligned_cols=32 Identities=9% Similarity=-0.011 Sum_probs=24.2
Q ss_pred cccEEEEccC------hHHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDCAG------LNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G------~~~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|+-... ...++++..+.|+|||+++++-
T Consensus 135 ~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 135 KWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 4787775422 3357899999999999999873
No 281
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=41.96 E-value=25 Score=22.13 Aligned_cols=32 Identities=13% Similarity=0.177 Sum_probs=23.5
Q ss_pred cccEEEEccC-----hH---HHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDCAG-----LN---KTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G-----~~---~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|+-... .+ ..++.+.+.++|||++++.-
T Consensus 106 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 106 SIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFAD 145 (220)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 4777775422 22 27889999999999999874
No 282
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=41.68 E-value=23 Score=23.07 Aligned_cols=23 Identities=9% Similarity=0.101 Sum_probs=19.0
Q ss_pred HHHHHHHHhccCCCEEEEecCCC
Q 034260 16 KTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 16 ~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
..++.+.+.|++||++++++...
T Consensus 195 ~~l~~~~~~LkpgG~l~~~~~~~ 217 (250)
T 1o9g_A 195 GLLRSLASALPAHAVIAVTDRSR 217 (250)
T ss_dssp HHHHHHHHHSCTTCEEEEEESSS
T ss_pred HHHHHHHHhcCCCcEEEEeCcch
Confidence 56888899999999999976543
No 283
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=41.58 E-value=14 Score=24.95 Aligned_cols=32 Identities=9% Similarity=0.063 Sum_probs=23.6
Q ss_pred cccEEEEccChH-HHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDCAGLN-KTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G~~-~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|+-....+ ..++.+.+.|++||.+++-.
T Consensus 139 ~fD~Ii~d~~dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 139 KYDLIFCLQEPDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp CEEEEEESSCCCHHHHHHHHTTEEEEEEEEEEE
T ss_pred hCCEEEECCCChHHHHHHHHHhcCCCcEEEEEc
Confidence 378877544333 35889999999999999853
No 284
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=41.47 E-value=50 Score=22.45 Aligned_cols=30 Identities=23% Similarity=0.232 Sum_probs=23.8
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+.|+......+.+.++++. |+-|++
T Consensus 62 ~~D~V~i~tp~~~h~~~~~~al~~-Gk~v~~ 91 (332)
T 2glx_A 62 DVDAVYVSTTNELHREQTLAAIRA-GKHVLC 91 (332)
T ss_dssp TCCEEEECSCGGGHHHHHHHHHHT-TCEEEE
T ss_pred CCCEEEEeCChhHhHHHHHHHHHC-CCeEEE
Confidence 589999999988777888888876 465555
No 285
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=41.46 E-value=28 Score=23.49 Aligned_cols=35 Identities=11% Similarity=0.071 Sum_probs=25.0
Q ss_pred cccEEEEcc-----ChHH----HHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCA-----GLNK----TMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~-----G~~~----~~~~al~~l~~gGrvv~vG~~~ 38 (100)
.+|+|+-.. ..+. .++.+.+.++|||++++.-...
T Consensus 187 ~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 187 GYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp CEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred CeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 478877533 1222 4789999999999999876554
No 286
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=41.13 E-value=24 Score=22.75 Aligned_cols=34 Identities=6% Similarity=-0.077 Sum_probs=24.4
Q ss_pred ccEEEEcc--------ChHHHHHHHHHhccCCCEEEEecCCC
Q 034260 5 IDVSFDCA--------GLNKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 5 ~D~vie~~--------G~~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
+|+|+-.. -....++++.+.|+|||+++++-...
T Consensus 125 ~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 125 DANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp SCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECT
T ss_pred ccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 56766542 12367888999999999998876543
No 287
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=41.07 E-value=32 Score=25.55 Aligned_cols=29 Identities=31% Similarity=0.440 Sum_probs=22.0
Q ss_pred cccEEEEccChHH-HHHHHHHhccCCCEEE
Q 034260 4 GIDVSFDCAGLNK-TMSTVLDATRAGDKVC 32 (100)
Q Consensus 4 G~D~vie~~G~~~-~~~~al~~l~~gGrvv 32 (100)
.+|+|++|+|.+. ..+.++++++.|=.++
T Consensus 107 dIDaVviaTp~p~~H~e~a~~AL~AGKHVv 136 (446)
T 3upl_A 107 LIDVIIDATGIPEVGAETGIAAIRNGKHLV 136 (446)
T ss_dssp TCCEEEECSCCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEcCCChHHHHHHHHHHHHcCCcEE
Confidence 5899999999864 4678888887754444
No 288
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=41.02 E-value=22 Score=26.45 Aligned_cols=20 Identities=5% Similarity=0.026 Sum_probs=16.7
Q ss_pred HHHHHHHHhccCCCEEEEec
Q 034260 16 KTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 16 ~~~~~al~~l~~gGrvv~vG 35 (100)
..++.+.++++|||+++..-
T Consensus 210 ~iL~~a~~~LkpGG~LvysT 229 (464)
T 3m6w_A 210 ALLAQASRLLGPGGVLVYST 229 (464)
T ss_dssp HHHHHHHTTEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEEe
Confidence 46788999999999999743
No 289
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=40.90 E-value=22 Score=24.09 Aligned_cols=21 Identities=14% Similarity=-0.001 Sum_probs=17.7
Q ss_pred HHHHHHHHHhccCCCEEEEec
Q 034260 15 NKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 15 ~~~~~~al~~l~~gGrvv~vG 35 (100)
...++.+.+.|++||.+++-.
T Consensus 173 ~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 173 EEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHhcCCCcEEEEEc
Confidence 456889999999999999863
No 290
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=40.33 E-value=35 Score=23.53 Aligned_cols=17 Identities=12% Similarity=0.298 Sum_probs=14.1
Q ss_pred HHHHHHHhccCCCEEEE
Q 034260 17 TMSTVLDATRAGDKVCL 33 (100)
Q Consensus 17 ~~~~al~~l~~gGrvv~ 33 (100)
++..+.+.|+|||++++
T Consensus 173 ~L~~~~~~LkpGG~~v~ 189 (305)
T 2p41_A 173 VLNLVENWLSNNTQFCV 189 (305)
T ss_dssp HHHHHHHHCCTTCEEEE
T ss_pred HHHHHHHHhCCCCEEEE
Confidence 56667799999998886
No 291
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=39.54 E-value=29 Score=21.87 Aligned_cols=31 Identities=10% Similarity=0.079 Sum_probs=21.5
Q ss_pred cccEEEEcc-----Ch---HHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCA-----GL---NKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~-----G~---~~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+-.. .. ...++.+.+.++|||.++.+
T Consensus 102 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~ 140 (217)
T 3jwh_A 102 GYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTT 140 (217)
T ss_dssp SCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred CcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 578887432 21 35678888999999966654
No 292
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=39.51 E-value=18 Score=24.54 Aligned_cols=34 Identities=15% Similarity=0.189 Sum_probs=24.9
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
.+|++||.+-.. +...-++.+...|.-+++|..+
T Consensus 53 ~~DVvIDFT~P~-a~~~~~~~~~~~g~~~ViGTTG 86 (228)
T 1vm6_A 53 SPDVVIDFSSPE-ALPKTVDLCKKYRAGLVLGTTA 86 (228)
T ss_dssp CCSEEEECSCGG-GHHHHHHHHHHHTCEEEECCCS
T ss_pred CCCEEEECCCHH-HHHHHHHHHHHcCCCEEEeCCC
Confidence 589999999754 5555566666667777788765
No 293
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=39.36 E-value=41 Score=22.23 Aligned_cols=32 Identities=19% Similarity=0.208 Sum_probs=20.5
Q ss_pred cccEEEEccChHHHHHHHHH----hccCCCEEEEec
Q 034260 4 GIDVSFDCAGLNKTMSTVLD----ATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~----~l~~gGrvv~vG 35 (100)
.+|+|+.|+..+..+++.++ .++++..++.++
T Consensus 55 ~~D~vi~~v~~~~~~~~v~~~l~~~l~~~~~vv~~s 90 (289)
T 2cvz_A 55 EARVIFTCLPTTREVYEVAEALYPYLREGTYWVDAT 90 (289)
T ss_dssp GCSEEEECCSSHHHHHHHHHHHTTTCCTTEEEEECS
T ss_pred CCCEEEEeCCChHHHHHHHHHHHhhCCCCCEEEECC
Confidence 58999999998765555543 344554444444
No 294
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=39.32 E-value=7.3 Score=24.60 Aligned_cols=36 Identities=8% Similarity=0.078 Sum_probs=24.6
Q ss_pred CcccEEEEccChH---HHHHHHHHhccCCCEEEEecCCC
Q 034260 3 AGIDVSFDCAGLN---KTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 3 ~G~D~vie~~G~~---~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
..+|+|+-..... ..++++.+++++||++++.....
T Consensus 124 ~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 162 (205)
T 3grz_A 124 GKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSGIDY 162 (205)
T ss_dssp SCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEEEEG
T ss_pred CCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEecCc
Confidence 3578887655443 23566677889999999865443
No 295
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=39.18 E-value=12 Score=25.04 Aligned_cols=31 Identities=19% Similarity=0.381 Sum_probs=23.3
Q ss_pred ccEEEEccCh----------HHHHHHHHHhccCCCEEEEec
Q 034260 5 IDVSFDCAGL----------NKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 5 ~D~vie~~G~----------~~~~~~al~~l~~gGrvv~vG 35 (100)
+|+|+-...- ..+++.+.++|+|||++++.+
T Consensus 175 fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 175 ADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp EEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 7888765321 245777889999999999985
No 296
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=39.05 E-value=32 Score=23.20 Aligned_cols=32 Identities=25% Similarity=0.254 Sum_probs=21.6
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
.+|++||++....+. ..++ ...|.-+++|..+
T Consensus 54 ~~DVvIDft~p~a~~-~~~~--l~~g~~vVigTTG 85 (243)
T 3qy9_A 54 GADVAIDFSNPNLLF-PLLD--EDFHLPLVVATTG 85 (243)
T ss_dssp TCSEEEECSCHHHHH-HHHT--SCCCCCEEECCCS
T ss_pred CCCEEEEeCChHHHH-HHHH--HhcCCceEeCCCC
Confidence 589999999865444 4455 4556666677654
No 297
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=38.93 E-value=29 Score=24.96 Aligned_cols=24 Identities=13% Similarity=0.067 Sum_probs=19.5
Q ss_pred HHHHHHHHhccCCCEEEEecCCCC
Q 034260 16 KTMSTVLDATRAGDKVCLVGMGHH 39 (100)
Q Consensus 16 ~~~~~al~~l~~gGrvv~vG~~~~ 39 (100)
..++.++++++|||+++++.....
T Consensus 307 ~ll~~a~~~LkpGG~Lv~~s~s~~ 330 (393)
T 4dmg_A 307 DLVREALRLLAEEGFLWLSSCSYH 330 (393)
T ss_dssp HHHHHHHHTEEEEEEEEEEECCTT
T ss_pred HHHHHHHHhcCCCCEEEEEECCCC
Confidence 578889999999999997765543
No 298
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=38.85 E-value=23 Score=23.16 Aligned_cols=33 Identities=12% Similarity=0.301 Sum_probs=24.3
Q ss_pred cccEEEEc-----c-ChHHHHHHHHHhccCCCEEEEecC
Q 034260 4 GIDVSFDC-----A-GLNKTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 4 G~D~vie~-----~-G~~~~~~~al~~l~~gGrvv~vG~ 36 (100)
.+|+|+-. . .....++++.+.++|||++++.-.
T Consensus 129 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 167 (273)
T 3bus_A 129 SFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADF 167 (273)
T ss_dssp CEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 47887642 2 234678899999999999998753
No 299
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=38.65 E-value=26 Score=24.58 Aligned_cols=31 Identities=26% Similarity=0.356 Sum_probs=23.7
Q ss_pred cccEEEE-cc---C------hHHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFD-CA---G------LNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie-~~---G------~~~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+- +. + ....++.+.++|++||.+++-
T Consensus 194 ~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 194 SYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp CEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred CccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 5788774 22 1 246789999999999999986
No 300
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=38.44 E-value=24 Score=23.80 Aligned_cols=33 Identities=9% Similarity=-0.076 Sum_probs=24.4
Q ss_pred cccEEEEccCh----------HHHHHHHHHhccCCCEEEEecC
Q 034260 4 GIDVSFDCAGL----------NKTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 4 G~D~vie~~G~----------~~~~~~al~~l~~gGrvv~vG~ 36 (100)
.+|+|+--... ...++.+.+.|++||.+++-..
T Consensus 148 ~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 148 QYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD 190 (275)
T ss_dssp CEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred CeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 47877653321 3678999999999999998743
No 301
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=38.43 E-value=20 Score=22.71 Aligned_cols=32 Identities=9% Similarity=0.017 Sum_probs=21.7
Q ss_pred cccEEEEccC-----h---HHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDCAG-----L---NKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G-----~---~~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|++..- . ...+++..+.|+|||+++++.
T Consensus 101 ~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~ 140 (203)
T 1pjz_A 101 HCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT 140 (203)
T ss_dssp SEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred CEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 4788886321 1 135778889999999955443
No 302
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=38.37 E-value=30 Score=23.93 Aligned_cols=33 Identities=18% Similarity=0.311 Sum_probs=22.3
Q ss_pred cccEEEEccChHH------------------HHHHHHHhccCCCEEEEecC
Q 034260 4 GIDVSFDCAGLNK------------------TMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 4 G~D~vie~~G~~~------------------~~~~al~~l~~gGrvv~vG~ 36 (100)
++|+|+.++|.+. .+-..++...|.+.+++++.
T Consensus 67 ~aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 117 (308)
T 2d4a_B 67 GSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTN 117 (308)
T ss_dssp TCSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 6899999988653 22233333469999988754
No 303
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=38.31 E-value=25 Score=24.17 Aligned_cols=32 Identities=9% Similarity=-0.030 Sum_probs=23.1
Q ss_pred cccEEEEccCh----------HHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDCAGL----------NKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G~----------~~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|+--... ...++.+.+.|++||.+++-.
T Consensus 157 ~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 157 TFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp CEEEEEECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred CccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 47887653221 346788999999999999875
No 304
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=38.00 E-value=40 Score=22.92 Aligned_cols=30 Identities=20% Similarity=0.158 Sum_probs=23.4
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+.|++.....+.+.++++.| +-|++
T Consensus 65 ~~D~V~i~tp~~~h~~~~~~al~~G-~~v~~ 94 (319)
T 1tlt_A 65 SCDAVFVHSSTASHFDVVSTLLNAG-VHVCV 94 (319)
T ss_dssp TCSEEEECSCTTHHHHHHHHHHHTT-CEEEE
T ss_pred CCCEEEEeCCchhHHHHHHHHHHcC-CeEEE
Confidence 5899999999887788888887764 55555
No 305
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=37.73 E-value=60 Score=22.44 Aligned_cols=38 Identities=21% Similarity=0.245 Sum_probs=28.7
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccCh
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPL 45 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~ 45 (100)
.+|+|+.|++.....+.+.++++.| +-|++ .+|+..+.
T Consensus 65 ~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~---EKP~a~~~ 102 (349)
T 3i23_A 65 EIELITICTPAHTHYDLAKQAILAG-KSVIV---EKPFCDTL 102 (349)
T ss_dssp TCCEEEECSCGGGHHHHHHHHHHTT-CEEEE---CSCSCSSH
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHcC-CEEEE---ECCCcCCH
Confidence 5899999999988888888888865 66665 44555444
No 306
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=37.58 E-value=24 Score=24.15 Aligned_cols=22 Identities=9% Similarity=0.025 Sum_probs=18.2
Q ss_pred HHHHHHHHHhccCCCEEEEecC
Q 034260 15 NKTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 15 ~~~~~~al~~l~~gGrvv~vG~ 36 (100)
...++.+.+.|++||.+++-..
T Consensus 185 ~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 185 EEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp HHHHHHHHHHEEEEEEEEEECC
T ss_pred HHHHHHHHHhcCCCcEEEEEcc
Confidence 3567899999999999998743
No 307
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=37.41 E-value=28 Score=24.04 Aligned_cols=34 Identities=15% Similarity=0.086 Sum_probs=24.4
Q ss_pred cccEEEEcc-----Ch---HHHHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCA-----GL---NKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~-----G~---~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
++|+|+-.. .. ...++.+.++++|||+++++-..
T Consensus 247 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~ 288 (348)
T 3lst_A 247 HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAV 288 (348)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECC
T ss_pred CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 467766532 22 25788899999999999987654
No 308
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=37.38 E-value=54 Score=21.38 Aligned_cols=35 Identities=14% Similarity=0.241 Sum_probs=25.8
Q ss_pred CcccEEEEccC------hHHHHHHHHHhccCCCEEEEecCCC
Q 034260 3 AGIDVSFDCAG------LNKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 3 ~G~D~vie~~G------~~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
+.+|+|+-... ....++++.+.++ ||+++++-...
T Consensus 93 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~ 133 (261)
T 3ege_A 93 KSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDI 133 (261)
T ss_dssp TCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECG
T ss_pred CCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCC
Confidence 35788876542 2467899999999 99998876543
No 309
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=37.34 E-value=12 Score=24.56 Aligned_cols=19 Identities=5% Similarity=0.071 Sum_probs=16.1
Q ss_pred HHHHHHHHhccCCCEEEEe
Q 034260 16 KTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 16 ~~~~~al~~l~~gGrvv~v 34 (100)
..++++.++|||||++++.
T Consensus 151 ~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 151 FIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp HHHHTHHHHEEEEEEEEEC
T ss_pred hhhhhhhheeCCCCEEEEE
Confidence 4577889999999999875
No 310
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=37.27 E-value=20 Score=23.39 Aligned_cols=20 Identities=15% Similarity=0.147 Sum_probs=17.5
Q ss_pred HHHHHHHHhccCCCEEEEec
Q 034260 16 KTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 16 ~~~~~al~~l~~gGrvv~vG 35 (100)
..++.+.+.|++||++++..
T Consensus 154 ~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 154 TLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCCEEEEEe
Confidence 67899999999999999853
No 311
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=37.23 E-value=29 Score=24.34 Aligned_cols=23 Identities=17% Similarity=0.055 Sum_probs=18.9
Q ss_pred HHHHHHHHhccCCCEEEEecCCC
Q 034260 16 KTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 16 ~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
..++.+.++++|||+++++-...
T Consensus 281 ~~l~~~~~~L~pgG~l~i~e~~~ 303 (368)
T 3reo_A 281 KLLKNCYAALPDHGKVIVAEYIL 303 (368)
T ss_dssp HHHHHHHHHSCTTCEEEEEECCC
T ss_pred HHHHHHHHHcCCCCEEEEEEecc
Confidence 45788999999999999986543
No 312
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=36.94 E-value=26 Score=24.38 Aligned_cols=32 Identities=16% Similarity=0.112 Sum_probs=22.5
Q ss_pred cccEEEEccCh----------HHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDCAGL----------NKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G~----------~~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|+--... ...++.+.+.|++||.+++-.
T Consensus 181 ~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 181 EFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CEEEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred CceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 57887743311 356888999999999999864
No 313
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=36.47 E-value=19 Score=24.24 Aligned_cols=34 Identities=9% Similarity=-0.034 Sum_probs=24.6
Q ss_pred cccEEEEccC--hHHHHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCAG--LNKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~G--~~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
.+|+|+-.-. ....++.+.++++|||++++....
T Consensus 192 ~fD~Vi~~~p~~~~~~l~~~~~~LkpgG~l~~~~~~ 227 (278)
T 2frn_A 192 IADRILMGYVVRTHEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp CEEEEEECCCSSGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred CccEEEECCchhHHHHHHHHHHHCCCCeEEEEEEee
Confidence 4777665322 235788999999999999986544
No 314
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=36.08 E-value=23 Score=24.42 Aligned_cols=32 Identities=19% Similarity=0.304 Sum_probs=23.0
Q ss_pred cccEEE-EccCh---------HHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSF-DCAGL---------NKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vi-e~~G~---------~~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|+ |+.-. ...++.+.+.|++||.+++-.
T Consensus 168 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 168 AFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp CEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred CceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 578877 44321 246889999999999999864
No 315
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=35.75 E-value=33 Score=23.97 Aligned_cols=22 Identities=5% Similarity=0.217 Sum_probs=18.4
Q ss_pred HHHHHHHHhccCCCEEEEecCC
Q 034260 16 KTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 16 ~~~~~al~~l~~gGrvv~vG~~ 37 (100)
..++.+.++++|||+++++-..
T Consensus 264 ~iL~~~~~al~pgg~lli~e~~ 285 (353)
T 4a6d_A 264 HLLERIYHTCKPGGGILVIESL 285 (353)
T ss_dssp HHHHHHHHHCCTTCEEEEEECC
T ss_pred HHHHHHHhhCCCCCEEEEEEee
Confidence 3578899999999999998654
No 316
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=35.72 E-value=15 Score=24.38 Aligned_cols=34 Identities=6% Similarity=-0.010 Sum_probs=24.2
Q ss_pred cccEEEEcc------Ch----HHHHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCA------GL----NKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~------G~----~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
.+|+|+-.- .. ...+....++|+|||++++.+..
T Consensus 156 ~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~ 199 (263)
T 2a14_A 156 LADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTL 199 (263)
T ss_dssp CEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred CCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEee
Confidence 478877641 21 24677777899999999998643
No 317
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=35.54 E-value=26 Score=25.04 Aligned_cols=36 Identities=14% Similarity=0.070 Sum_probs=26.1
Q ss_pred cccEEEEc--------cC---hHHHHHHHHHhccCCCEEEEecCCCC
Q 034260 4 GIDVSFDC--------AG---LNKTMSTVLDATRAGDKVCLVGMGHH 39 (100)
Q Consensus 4 G~D~vie~--------~G---~~~~~~~al~~l~~gGrvv~vG~~~~ 39 (100)
.+|+|+-. .. ....++++.+.+++||+++++.....
T Consensus 298 ~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l 344 (381)
T 3dmg_A 298 RFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFL 344 (381)
T ss_dssp CEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTS
T ss_pred CeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCC
Confidence 57888753 11 12467888999999999999876543
No 318
>3ny7_A YCHM protein, sulfate transporter; fatty acid biosynthesis(FAB), bicarbonate transport, anion T membrane protein, STAS domain, SLC26; HET: SXM; 1.92A {Escherichia coli}
Probab=35.22 E-value=21 Score=20.86 Aligned_cols=32 Identities=6% Similarity=0.144 Sum_probs=19.9
Q ss_pred EEEEccChH-------HHHHHHHHhccCCCEEEEecCCC
Q 034260 7 VSFDCAGLN-------KTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 7 ~vie~~G~~-------~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
+++|+++.+ .++....+.++.|++++++|...
T Consensus 49 vilDl~~v~~iDssgl~~L~~~~~~~~~g~~l~l~~~~~ 87 (118)
T 3ny7_A 49 VILKWDAVPVLDAGGLDAFQRFVKRLPEGCELRVCNVEF 87 (118)
T ss_dssp EEEEEEECCCBCHHHHHHHHHHHHHCCTTCEEEEECCCH
T ss_pred EEEEcCCCCeecHHHHHHHHHHHHHHHCCCEEEEecCCH
Confidence 555654433 35666666665588888887653
No 319
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=35.21 E-value=57 Score=22.42 Aligned_cols=12 Identities=25% Similarity=0.202 Sum_probs=9.9
Q ss_pred cccEEEEccChH
Q 034260 4 GIDVSFDCAGLN 15 (100)
Q Consensus 4 G~D~vie~~G~~ 15 (100)
++|+||+|+|.+
T Consensus 70 ~aD~Vi~a~g~p 81 (309)
T 1ur5_A 70 NSDVIVVTSGAP 81 (309)
T ss_dssp TCSEEEECCCC-
T ss_pred CCCEEEEcCCCC
Confidence 689999999775
No 320
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=35.09 E-value=32 Score=23.51 Aligned_cols=35 Identities=11% Similarity=-0.003 Sum_probs=25.0
Q ss_pred cccEEEEc-----cCh---HHHHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDC-----AGL---NKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~-----~G~---~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
++|+++-. ... ...++.+.++++|||+++++-...
T Consensus 235 ~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 277 (332)
T 3i53_A 235 GAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVA 277 (332)
T ss_dssp SCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCC
T ss_pred CCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecC
Confidence 57777652 222 357888999999999999876443
No 321
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=35.02 E-value=36 Score=23.42 Aligned_cols=22 Identities=9% Similarity=0.288 Sum_probs=18.6
Q ss_pred HHHHHHHHhccCCCEEEEecCC
Q 034260 16 KTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 16 ~~~~~al~~l~~gGrvv~vG~~ 37 (100)
..++.+.+.++|||+++++-..
T Consensus 269 ~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 269 RILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp HHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHhcCCCcEEEEEEEe
Confidence 5788899999999999987654
No 322
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=34.97 E-value=20 Score=24.13 Aligned_cols=19 Identities=11% Similarity=0.293 Sum_probs=16.5
Q ss_pred HHHHHHHHhccCCCEEEEe
Q 034260 16 KTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 16 ~~~~~al~~l~~gGrvv~v 34 (100)
..+++..+.|+|||++++.
T Consensus 159 ~~l~~i~~~LkpGG~lii~ 177 (261)
T 4gek_A 159 ALLDKIYQGLNPGGALVLS 177 (261)
T ss_dssp HHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCcEEEEE
Confidence 4688899999999999985
No 323
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=34.52 E-value=35 Score=21.82 Aligned_cols=21 Identities=5% Similarity=0.113 Sum_probs=18.1
Q ss_pred HHHHHHHHHhccCCCEEEEec
Q 034260 15 NKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 15 ~~~~~~al~~l~~gGrvv~vG 35 (100)
...++++.+.|+|||++++..
T Consensus 133 ~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 133 SHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp HHHHHHHHHHHTTSCEEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEEe
Confidence 467899999999999999864
No 324
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=34.41 E-value=26 Score=24.26 Aligned_cols=22 Identities=5% Similarity=-0.044 Sum_probs=18.2
Q ss_pred HHHHHHHHhccCCCEEEEecCC
Q 034260 16 KTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 16 ~~~~~al~~l~~gGrvv~vG~~ 37 (100)
..++++.+.|+|||++++.-..
T Consensus 152 ~~l~~a~r~LkpGG~~v~~~~~ 173 (290)
T 2xyq_A 152 YLCGFIKQKLALGGSIAVKITE 173 (290)
T ss_dssp HHHHHHHHHEEEEEEEEEEECS
T ss_pred HHHHHHHHhcCCCcEEEEEEec
Confidence 5788999999999999985433
No 325
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=34.40 E-value=33 Score=24.23 Aligned_cols=30 Identities=23% Similarity=0.238 Sum_probs=19.6
Q ss_pred cccEEEEccChHH-HHHHHHHhccCCCEEEE
Q 034260 4 GIDVSFDCAGLNK-TMSTVLDATRAGDKVCL 33 (100)
Q Consensus 4 G~D~vie~~G~~~-~~~~al~~l~~gGrvv~ 33 (100)
.+|+|+||++... ..+.+.++++.|=.++.
T Consensus 66 ~iDvVve~t~~~~~a~~~~~~AL~aGKhVVt 96 (332)
T 2ejw_A 66 EADLVVEAMGGVEAPLRLVLPALEAGIPLIT 96 (332)
T ss_dssp TCSEEEECCCCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEECCCCcHHHHHHHHHHHHcCCeEEE
Confidence 4799999999763 34555567765544443
No 326
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=34.32 E-value=35 Score=23.81 Aligned_cols=36 Identities=14% Similarity=0.199 Sum_probs=25.3
Q ss_pred CcccEEEEcc-----ChH---HHHHHHHHhccCCCEEEEecCCC
Q 034260 3 AGIDVSFDCA-----GLN---KTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 3 ~G~D~vie~~-----G~~---~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
.++|+++-.. ..+ ..++++.++++|||+++++-...
T Consensus 247 ~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 290 (363)
T 3dp7_A 247 TGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLW 290 (363)
T ss_dssp CCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCT
T ss_pred CCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeecc
Confidence 3678877532 222 35788889999999999976543
No 327
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=34.15 E-value=82 Score=20.77 Aligned_cols=34 Identities=9% Similarity=-0.075 Sum_probs=21.8
Q ss_pred cccEEEEccChHHH---HHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCAGLNKT---MSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~G~~~~---~~~al~~l~~gGrvv~vG~~ 37 (100)
.+|+|+.|++.... +++....++++..++.++..
T Consensus 62 ~aDvVilavp~~~~~~v~~~l~~~l~~~~iv~~~~~~ 98 (281)
T 2g5c_A 62 SPDFVMLSSPVRTFREIAKKLSYILSEDATVTDQGSV 98 (281)
T ss_dssp CCSEEEECSCHHHHHHHHHHHHHHSCTTCEEEECCSC
T ss_pred CCCEEEEcCCHHHHHHHHHHHHhhCCCCcEEEECCCC
Confidence 68999999997643 23333456677666655543
No 328
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=34.12 E-value=77 Score=21.22 Aligned_cols=32 Identities=16% Similarity=0.131 Sum_probs=21.0
Q ss_pred cccEEEEccChHHHHHHHHH-------hccCCCEEEEec
Q 034260 4 GIDVSFDCAGLNKTMSTVLD-------ATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~-------~l~~gGrvv~vG 35 (100)
.+|+||.|++.+..+++.+. .++++..++.++
T Consensus 59 ~aDvvi~~vp~~~~~~~v~~~~~~~~~~l~~~~~vi~~s 97 (302)
T 2h78_A 59 GADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECS 97 (302)
T ss_dssp TCSEEEECCSCHHHHHHHHHSSSCGGGSSCSSCEEEECS
T ss_pred CCCeEEEECCCHHHHHHHHcCchhHHhcCCCCcEEEECC
Confidence 47999999987766666665 344554444443
No 329
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=34.00 E-value=44 Score=22.83 Aligned_cols=31 Identities=23% Similarity=0.317 Sum_probs=24.5
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|+.|+......+.+.++++.| +-|++-
T Consensus 63 ~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~E 93 (331)
T 4hkt_A 63 DIDAVVICTPTDTHADLIERFARAG-KAIFCE 93 (331)
T ss_dssp TCCEEEECSCGGGHHHHHHHHHHTT-CEEEEC
T ss_pred CCCEEEEeCCchhHHHHHHHHHHcC-CcEEEe
Confidence 5899999999988888888888775 555543
No 330
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=33.98 E-value=21 Score=22.74 Aligned_cols=34 Identities=3% Similarity=-0.063 Sum_probs=24.2
Q ss_pred cccEEEEcc-----ChH---HHHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCA-----GLN---KTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~-----G~~---~~~~~al~~l~~gGrvv~vG~~ 37 (100)
.+|+|+-.- ..+ ..++++.+.++|||++++.-..
T Consensus 109 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 150 (234)
T 3dtn_A 109 KYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLV 150 (234)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 467776542 222 3688999999999999987543
No 331
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=33.97 E-value=35 Score=23.89 Aligned_cols=22 Identities=32% Similarity=0.241 Sum_probs=18.4
Q ss_pred HHHHHHHHhccCCCEEEEecCC
Q 034260 16 KTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 16 ~~~~~al~~l~~gGrvv~vG~~ 37 (100)
..++.+.++++|||+++++-..
T Consensus 279 ~~L~~~~~~L~pgG~l~i~e~~ 300 (364)
T 3p9c_A 279 TLLKNCYDALPAHGKVVLVQCI 300 (364)
T ss_dssp HHHHHHHHHSCTTCEEEEEECC
T ss_pred HHHHHHHHHcCCCCEEEEEEec
Confidence 4678889999999999998654
No 332
>2kln_A Probable sulphate-transport transmembrane protein; SLC26, sulfate, antisigma factor antagonist, ensemble structures, transport protein; NMR {Mycobacterium bovis}
Probab=33.78 E-value=28 Score=20.43 Aligned_cols=33 Identities=3% Similarity=-0.007 Sum_probs=19.1
Q ss_pred cEEEEccChH-------HHHHHHHHhcc-CCCEEEEecCCC
Q 034260 6 DVSFDCAGLN-------KTMSTVLDATR-AGDKVCLVGMGH 38 (100)
Q Consensus 6 D~vie~~G~~-------~~~~~al~~l~-~gGrvv~vG~~~ 38 (100)
.+++|+++.. .++....+.++ .|++++++|...
T Consensus 50 ~vvlDls~v~~iDssgl~~L~~~~~~~~~~g~~l~l~~~~~ 90 (130)
T 2kln_A 50 WFVLNAESNVEVDLTALDALDQLRTELLRRGIVFAMARVKQ 90 (130)
T ss_dssp EEEEECSCCSSSBCSTTTHHHHHHHHHHTTTEEEEEECCSS
T ss_pred EEEEECCCCChhhHHHHHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3566665543 24555555554 566677777654
No 333
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=33.65 E-value=28 Score=21.50 Aligned_cols=23 Identities=9% Similarity=0.089 Sum_probs=15.8
Q ss_pred HHHHHHHHHhccCCCEEEEecCC
Q 034260 15 NKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 15 ~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
...++.+.+.+++||+++++...
T Consensus 144 ~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 144 RRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp HHHHTCCGGGBCSSSEEEEEECT
T ss_pred HHHHHHHHHHhcCCCeEEEEEEC
Confidence 34566777889999995555443
No 334
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=33.62 E-value=18 Score=25.89 Aligned_cols=19 Identities=26% Similarity=0.289 Sum_probs=15.6
Q ss_pred HHHHHHHhccCCCEEEEec
Q 034260 17 TMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 17 ~~~~al~~l~~gGrvv~vG 35 (100)
.++.|+++++|||++|..-
T Consensus 266 iL~~a~~~lkpGG~LVYsT 284 (359)
T 4fzv_A 266 LLAAGLLATKPGGHVVYST 284 (359)
T ss_dssp HHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHhcCCCCcEEEEEe
Confidence 4677899999999999653
No 335
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=33.27 E-value=41 Score=23.47 Aligned_cols=33 Identities=15% Similarity=0.102 Sum_probs=21.0
Q ss_pred cccEEEEccChHH---------------H---HHHHHHhccCCCEEEEecC
Q 034260 4 GIDVSFDCAGLNK---------------T---MSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 4 G~D~vie~~G~~~---------------~---~~~al~~l~~gGrvv~vG~ 36 (100)
++|+||+|+|.+. . +-..++...|.+.+++++.
T Consensus 82 ~aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tN 132 (328)
T 2hjr_A 82 NSDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITN 132 (328)
T ss_dssp TCSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 6899999996542 1 2233333358888777644
No 336
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=33.11 E-value=22 Score=23.42 Aligned_cols=20 Identities=20% Similarity=0.283 Sum_probs=17.4
Q ss_pred HHHHHHHHhccCCCEEEEec
Q 034260 16 KTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 16 ~~~~~al~~l~~gGrvv~vG 35 (100)
..++.+.+++++||+++++-
T Consensus 157 ~~l~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 157 DTIRVAASLLKQGGKANFVH 176 (259)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHccCCcEEEEEE
Confidence 46789999999999999974
No 337
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=33.01 E-value=70 Score=21.60 Aligned_cols=32 Identities=16% Similarity=0.119 Sum_probs=21.5
Q ss_pred cccEEEEccChHHHHHHHH-------HhccCCCEEEEec
Q 034260 4 GIDVSFDCAGLNKTMSTVL-------DATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al-------~~l~~gGrvv~vG 35 (100)
.+|+|+.|+..+..+++.+ ..++++..++-.+
T Consensus 64 ~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~s 102 (303)
T 3g0o_A 64 VVDALVILVVNAAQVRQVLFGEDGVAHLMKPGSAVMVSS 102 (303)
T ss_dssp TCSEEEECCSSHHHHHHHHC--CCCGGGSCTTCEEEECS
T ss_pred cCCEEEEECCCHHHHHHHHhChhhHHhhCCCCCEEEecC
Confidence 5799999999876666665 3455555555444
No 338
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=32.79 E-value=38 Score=23.87 Aligned_cols=33 Identities=9% Similarity=0.184 Sum_probs=24.5
Q ss_pred cccEEEEccC------hHHHHHHHHHhccCCCEEEEecC
Q 034260 4 GIDVSFDCAG------LNKTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 4 G~D~vie~~G------~~~~~~~al~~l~~gGrvv~vG~ 36 (100)
.+|+|+-... ....++++.+.|+|||++++.-.
T Consensus 166 ~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~ 204 (383)
T 4fsd_A 166 SVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDV 204 (383)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEe
Confidence 5788774331 23578999999999999998643
No 339
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=32.73 E-value=40 Score=22.46 Aligned_cols=31 Identities=13% Similarity=0.013 Sum_probs=19.5
Q ss_pred cccEEEEccChH---HHHHHHH-HhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLN---KTMSTVL-DATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~---~~~~~al-~~l~~gGrvv~v 34 (100)
.+|+|+--...+ ..+.... +.|++||++++.
T Consensus 146 ~~D~I~~d~a~~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 146 NVDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp CEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEEEecCCChhHHHHHHHHHHHhCCCCeEEEEE
Confidence 578876544332 1233333 489999999986
No 340
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=32.56 E-value=21 Score=22.26 Aligned_cols=31 Identities=13% Similarity=0.068 Sum_probs=22.4
Q ss_pred cccEEEEccC---hHHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDCAG---LNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G---~~~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|+ +.+ ....++.+.+.+++||++++.-
T Consensus 132 ~~D~i~-~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 132 PFDGVI-SRAFASLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp CEEEEE-CSCSSSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred CcCEEE-EeccCCHHHHHHHHHHhcCCCcEEEEEe
Confidence 478877 322 2356788888999999999873
No 341
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=32.56 E-value=65 Score=21.92 Aligned_cols=13 Identities=31% Similarity=0.263 Sum_probs=10.9
Q ss_pred cccEEEEccChHH
Q 034260 4 GIDVSFDCAGLNK 16 (100)
Q Consensus 4 G~D~vie~~G~~~ 16 (100)
++|+|+.|++.+.
T Consensus 69 ~aDvViiav~~~~ 81 (309)
T 1hyh_A 69 DADVVISTLGNIK 81 (309)
T ss_dssp TCSEEEECCSCGG
T ss_pred CCCEEEEecCCcc
Confidence 6899999999754
No 342
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=32.54 E-value=48 Score=22.82 Aligned_cols=30 Identities=20% Similarity=0.372 Sum_probs=23.9
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+.|+......+.+.++++.| +-|++
T Consensus 64 ~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~ 93 (344)
T 3ezy_A 64 NVDAVLVCSSTNTHSELVIACAKAK-KHVFC 93 (344)
T ss_dssp TCCEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred CCCEEEEcCCCcchHHHHHHHHhcC-CeEEE
Confidence 5899999999988888888888766 44554
No 343
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=32.48 E-value=64 Score=22.19 Aligned_cols=31 Identities=19% Similarity=0.159 Sum_probs=24.1
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~v 34 (100)
.+|++++++....+.+...++++.|=+.+++
T Consensus 70 ~~Dv~ii~vp~~~~~~~v~ea~~~Gi~~vVi 100 (294)
T 2yv1_A 70 DANASVIFVPAPFAKDAVFEAIDAGIELIVV 100 (294)
T ss_dssp CCCEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEccCHHHHHHHHHHHHHCCCCEEEE
Confidence 5899999999887777777777777664444
No 344
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=32.47 E-value=43 Score=23.05 Aligned_cols=31 Identities=16% Similarity=0.086 Sum_probs=24.2
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|+.|+......+.+.++++.| +-|++-
T Consensus 65 ~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~E 95 (344)
T 3euw_A 65 DIDGIVIGSPTSTHVDLITRAVERG-IPALCE 95 (344)
T ss_dssp CCCEEEECSCGGGHHHHHHHHHHTT-CCEEEC
T ss_pred CCCEEEEeCCchhhHHHHHHHHHcC-CcEEEE
Confidence 5899999999988888888888766 444443
No 345
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=32.03 E-value=36 Score=23.25 Aligned_cols=34 Identities=18% Similarity=0.111 Sum_probs=24.4
Q ss_pred cccEEEEccCh----------HHHHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCAGL----------NKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~G~----------~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
.+|+|+-.... ...++.+.+.|++||++++....
T Consensus 169 ~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 212 (304)
T 3bwc_A 169 TYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGES 212 (304)
T ss_dssp CEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 57887743211 35688999999999999987543
No 346
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=32.01 E-value=83 Score=20.96 Aligned_cols=32 Identities=13% Similarity=0.095 Sum_probs=21.0
Q ss_pred cccEEEEccChHHHHHHHH-------HhccCCCEEEEec
Q 034260 4 GIDVSFDCAGLNKTMSTVL-------DATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al-------~~l~~gGrvv~vG 35 (100)
.+|+|+.|+..+..+++.+ ..++++..++..+
T Consensus 57 ~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vi~~s 95 (287)
T 3pef_A 57 SCPVTFAMLADPAAAEEVCFGKHGVLEGIGEGRGYVDMS 95 (287)
T ss_dssp HCSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred cCCEEEEEcCCHHHHHHHHcCcchHhhcCCCCCEEEeCC
Confidence 4799999999665555555 4556665555443
No 347
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=31.81 E-value=45 Score=22.64 Aligned_cols=38 Identities=29% Similarity=0.409 Sum_probs=27.9
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccCh
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPL 45 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~ 45 (100)
.+|+|+.|++.....+.+.++++.| +-|++ .+|...+.
T Consensus 65 ~vD~V~i~tp~~~H~~~~~~al~aG-khVl~---EKPla~~~ 102 (294)
T 1lc0_A 65 EIDVAYICSESSSHEDYIRQFLQAG-KHVLV---EYPMTLSF 102 (294)
T ss_dssp SEEEEEECSCGGGHHHHHHHHHHTT-CEEEE---ESCSCSCH
T ss_pred CCCEEEEeCCcHhHHHHHHHHHHCC-CcEEE---eCCCCCCH
Confidence 5899999999988888888888764 55555 34555444
No 348
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=31.67 E-value=42 Score=23.05 Aligned_cols=30 Identities=23% Similarity=0.125 Sum_probs=23.8
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+.|+......+.+.++++.| +-|++
T Consensus 67 ~~D~V~i~tp~~~h~~~~~~al~~g-k~vl~ 96 (330)
T 3e9m_A 67 TIDIIYIPTYNQGHYSAAKLALSQG-KPVLL 96 (330)
T ss_dssp TCSEEEECCCGGGHHHHHHHHHHTT-CCEEE
T ss_pred CCCEEEEcCCCHHHHHHHHHHHHCC-CeEEE
Confidence 5899999999988888888888776 44444
No 349
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=31.57 E-value=38 Score=22.15 Aligned_cols=20 Identities=5% Similarity=-0.002 Sum_probs=14.4
Q ss_pred HHHHHhccCCCEEEEecCCC
Q 034260 19 STVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 19 ~~al~~l~~gGrvv~vG~~~ 38 (100)
+.++..++++|+++.++...
T Consensus 131 ~~~~~~~~~~g~iv~isS~~ 150 (266)
T 3oig_A 131 KAARPMMTEGGSIVTLTYLG 150 (266)
T ss_dssp HHHGGGCTTCEEEEEEECGG
T ss_pred HHHHhhcCCCceEEEEeccc
Confidence 44556667789999998643
No 350
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=31.48 E-value=64 Score=21.77 Aligned_cols=32 Identities=19% Similarity=0.312 Sum_probs=21.3
Q ss_pred cccEEEEccChHHHHHHHHH-------hccCCCEEEEec
Q 034260 4 GIDVSFDCAGLNKTMSTVLD-------ATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~-------~l~~gGrvv~vG 35 (100)
.+|+|+.|+..+..+++.+. .++++..++.++
T Consensus 86 ~~DvVi~av~~~~~~~~v~~~~~~~~~~l~~~~~vv~~s 124 (316)
T 2uyy_A 86 TCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMS 124 (316)
T ss_dssp HCSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECS
T ss_pred cCCEEEEeCCCHHHHHHHHcCchhHhhcCCCCCEEEECC
Confidence 47999999996666666653 345555555454
No 351
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=31.26 E-value=38 Score=22.88 Aligned_cols=34 Identities=12% Similarity=0.084 Sum_probs=24.6
Q ss_pred CcccEEEE-cc---Ch------HHHHHHHHHhccCCCEEEEecC
Q 034260 3 AGIDVSFD-CA---GL------NKTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 3 ~G~D~vie-~~---G~------~~~~~~al~~l~~gGrvv~vG~ 36 (100)
+.+|+|+- +. +. ...++.+.+.|++||.+++...
T Consensus 150 ~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 150 NTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp SCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred CCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 35788774 22 11 3678899999999999998754
No 352
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=30.99 E-value=40 Score=24.80 Aligned_cols=32 Identities=19% Similarity=0.173 Sum_probs=22.7
Q ss_pred cccEEEEc--cChH---HHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDC--AGLN---KTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~--~G~~---~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|+-. ...+ ..+.+..+.|++||++++.-
T Consensus 323 ~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 323 QCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp GCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred CCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEee
Confidence 47888852 2212 34678889999999999873
No 353
>1h4x_A SPOIIAA, anti-sigma F factor antagonist; cell differentiation, crystallography, phosphorylation, sigma factor, sporulation; HET: SEP; 1.16A {Bacillus sphaericus} SCOP: c.13.2.1 PDB: 1h4z_A 1h4y_A
Probab=30.77 E-value=42 Score=18.98 Aligned_cols=28 Identities=11% Similarity=0.172 Sum_probs=16.0
Q ss_pred EccChHHHHHHHHHhc-cCCCEEEEecCCC
Q 034260 10 DCAGLNKTMSTVLDAT-RAGDKVCLVGMGH 38 (100)
Q Consensus 10 e~~G~~~~~~~al~~l-~~gGrvv~vG~~~ 38 (100)
|++|. ..+....+.+ +.|+++.++|..+
T Consensus 56 Dssgl-~~L~~~~~~~~~~g~~l~l~~~~~ 84 (117)
T 1h4x_A 56 DSSGV-GLVLGRMRELEAVAGRTILLNPSP 84 (117)
T ss_dssp CTHHH-HHHHHHHHHHHTTTCEEEEESCCH
T ss_pred chHHH-HHHHHHHHHHHHcCCEEEEEeCCH
Confidence 33443 2444445444 4678888888654
No 354
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=30.72 E-value=34 Score=24.23 Aligned_cols=24 Identities=4% Similarity=-0.003 Sum_probs=18.8
Q ss_pred HHHHHHHHHhccCCCEEEEecCCC
Q 034260 15 NKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 15 ~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
...+..+++.++++|.+++.-.+.
T Consensus 319 ~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 319 KDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp HHHHHHHHHTEEEEEEEEEEECCT
T ss_pred HHHHHHHHHhcCCCcEEEEEeCCC
Confidence 456788999999999988765443
No 355
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=30.70 E-value=62 Score=22.72 Aligned_cols=29 Identities=24% Similarity=0.260 Sum_probs=18.8
Q ss_pred cccEEEEccCh----HHHHHHHHHhccCCCEEE
Q 034260 4 GIDVSFDCAGL----NKTMSTVLDATRAGDKVC 32 (100)
Q Consensus 4 G~D~vie~~G~----~~~~~~al~~l~~gGrvv 32 (100)
.+|+|+||+++ .++.+.+.++++.|=.++
T Consensus 82 ~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVV 114 (325)
T 3ing_A 82 AADLLVDCTPASRDGVREYSLYRMAFESGMNVV 114 (325)
T ss_dssp CCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEECCCCccccchHHHHHHHHHHCCCeEE
Confidence 57999999964 234566666666554444
No 356
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=30.50 E-value=52 Score=21.22 Aligned_cols=35 Identities=26% Similarity=0.359 Sum_probs=23.4
Q ss_pred cccEEEEccChHH------------------HHHHHHHhccC--CCEEEEecCCC
Q 034260 4 GIDVSFDCAGLNK------------------TMSTVLDATRA--GDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G~~~------------------~~~~al~~l~~--gGrvv~vG~~~ 38 (100)
++|++|.++|... ..+.++..+++ .|+++.++...
T Consensus 62 ~id~lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~ 116 (257)
T 1fjh_A 62 GMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVA 116 (257)
T ss_dssp CCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGG
T ss_pred CCCEEEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChh
Confidence 5899999998532 23445555543 38999998643
No 357
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=30.44 E-value=57 Score=22.51 Aligned_cols=30 Identities=10% Similarity=0.113 Sum_probs=24.0
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+.|+......+.+.++++.| +-|++
T Consensus 75 ~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~ 104 (354)
T 3q2i_A 75 DADIVILTTPSGLHPTQSIECSEAG-FHVMT 104 (354)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred CCCEEEECCCcHHHHHHHHHHHHCC-CCEEE
Confidence 5899999999988888888888775 55554
No 358
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=30.31 E-value=82 Score=21.90 Aligned_cols=23 Identities=0% Similarity=-0.174 Sum_probs=17.4
Q ss_pred HHHHHHHHhccCCCEEEEecCCC
Q 034260 16 KTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 16 ~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
..++.+.+++++||.+++.-...
T Consensus 253 ~ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 253 LMLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp HHHHHHHHTBCTTCCEEEEEECC
T ss_pred HHHHHHHHhcCcCcEEEEEECCC
Confidence 56888899999999966654443
No 359
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=30.12 E-value=47 Score=22.98 Aligned_cols=30 Identities=17% Similarity=0.241 Sum_probs=23.8
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+.|+......+.+.++++.| +-|++
T Consensus 66 ~~D~V~i~tp~~~h~~~~~~al~~g-k~vl~ 95 (354)
T 3db2_A 66 DVEMVIITVPNDKHAEVIEQCARSG-KHIYV 95 (354)
T ss_dssp SCCEEEECSCTTSHHHHHHHHHHTT-CEEEE
T ss_pred CCCEEEEeCChHHHHHHHHHHHHcC-CEEEE
Confidence 5899999999988888888888765 44554
No 360
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=30.10 E-value=48 Score=22.68 Aligned_cols=31 Identities=23% Similarity=0.220 Sum_probs=24.4
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~v 34 (100)
.+|+++.|+......+...++++.|=+++++
T Consensus 64 ~~D~viI~tP~~~~~~~~~ea~~~Gi~~iVi 94 (288)
T 2nu8_A 64 GATASVIYVPAPFCKDSILEAIDAGIKLIIT 94 (288)
T ss_dssp CCCEEEECCCGGGHHHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 5899999999988777777888777665444
No 361
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=29.98 E-value=58 Score=21.59 Aligned_cols=34 Identities=15% Similarity=0.280 Sum_probs=24.1
Q ss_pred cccEEEEccChH----------H---------------HHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCAGLN----------K---------------TMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~G~~----------~---------------~~~~al~~l~~gGrvv~vG~~ 37 (100)
++|+++.++|.. + ..+.++..++.+|+++.++..
T Consensus 107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~ 165 (283)
T 1g0o_A 107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSI 165 (283)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCG
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEech
Confidence 589999998842 1 234555666678999999864
No 362
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=29.90 E-value=22 Score=22.48 Aligned_cols=20 Identities=10% Similarity=0.215 Sum_probs=17.1
Q ss_pred HHHHHHHHHhccCCCEEEEe
Q 034260 15 NKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 15 ~~~~~~al~~l~~gGrvv~v 34 (100)
...++++.+.++|||++++.
T Consensus 120 ~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 120 PEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp SHHHHHHHHTEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEE
Confidence 45788999999999999973
No 363
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=29.88 E-value=57 Score=22.31 Aligned_cols=30 Identities=30% Similarity=0.241 Sum_probs=23.7
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+.|+......+.+.++++.| +-|++
T Consensus 67 ~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~ 96 (329)
T 3evn_A 67 SIDVIYVATINQDHYKVAKAALLAG-KHVLV 96 (329)
T ss_dssp TCCEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred CCCEEEECCCcHHHHHHHHHHHHCC-CeEEE
Confidence 5899999999988888888888765 44544
No 364
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=29.83 E-value=53 Score=23.34 Aligned_cols=56 Identities=14% Similarity=0.154 Sum_probs=33.2
Q ss_pred cccEEEEccChHHHHHHHHHhccCCC-EEEEe-cCCCCC-cccChHH-HHhcCcEEEeEe
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGD-KVCLV-GMGHHD-MTVPLTP-AAARYLIYGFLF 59 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gG-rvv~v-G~~~~~-~~i~~~~-l~~k~~~i~Gs~ 59 (100)
.+|++++++..+.+.+..++.+...| +.+++ .-.-.+ ....+.. .-.++++|.|.+
T Consensus 79 ~~DlaVi~vp~~~a~~ai~ea~~~~Gv~~vViiT~G~~e~~~~~l~~~a~~~g~rliGPN 138 (334)
T 3mwd_B 79 EVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIKKADQKGVTIIGPA 138 (334)
T ss_dssp TCCEEEECCCTTTHHHHHHHHTTSTTCCEEEECCSCCCHHHHHHHHHHHHHHTCEEECSS
T ss_pred CCcEEEEecCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEccC
Confidence 47999999998877888889998444 33333 221111 1111112 234578888755
No 365
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=29.70 E-value=28 Score=22.58 Aligned_cols=21 Identities=10% Similarity=-0.023 Sum_probs=17.8
Q ss_pred HHHHHHHHhccCCCEEEEecC
Q 034260 16 KTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 16 ~~~~~al~~l~~gGrvv~vG~ 36 (100)
..++++.+.|+|||++++.--
T Consensus 131 ~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 131 PFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp HHHHHHHHHEEEEEEEEEEES
T ss_pred HHHHHHHHHcCCCcEEEEEeC
Confidence 478999999999999988653
No 366
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=29.66 E-value=96 Score=21.19 Aligned_cols=33 Identities=15% Similarity=0.109 Sum_probs=22.0
Q ss_pred cccEEEEccChHHHHHHHHH------hccCCCEEEEecC
Q 034260 4 GIDVSFDCAGLNKTMSTVLD------ATRAGDKVCLVGM 36 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~------~l~~gGrvv~vG~ 36 (100)
.+|+|+.|+..+..+++.+. .++++..++-.+.
T Consensus 87 ~aDvVi~~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st 125 (320)
T 4dll_A 87 DADIVVSMLENGAVVQDVLFAQGVAAAMKPGSLFLDMAS 125 (320)
T ss_dssp TCSEEEECCSSHHHHHHHHTTTCHHHHCCTTCEEEECSC
T ss_pred cCCEEEEECCCHHHHHHHHcchhHHhhCCCCCEEEecCC
Confidence 57999999997666665553 4566655555543
No 367
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=29.56 E-value=62 Score=21.09 Aligned_cols=29 Identities=17% Similarity=0.165 Sum_probs=20.3
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEE
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCL 33 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~ 33 (100)
.+|+|+.|+. +...++.++.+++.+++++
T Consensus 57 ~~D~vi~~v~-~~~~~~v~~~l~~~~~ivv 85 (263)
T 1yqg_A 57 SDDVLILAVK-PQDMEAACKNIRTNGALVL 85 (263)
T ss_dssp TTSEEEECSC-HHHHHHHHTTCCCTTCEEE
T ss_pred cCCEEEEEeC-chhHHHHHHHhccCCCEEE
Confidence 4799999999 6677777776653255443
No 368
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=29.40 E-value=40 Score=22.15 Aligned_cols=20 Identities=5% Similarity=0.192 Sum_probs=17.7
Q ss_pred HHHHHHHHHhccCCCEEEEe
Q 034260 15 NKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 15 ~~~~~~al~~l~~gGrvv~v 34 (100)
...+.++.+.|+|||+++++
T Consensus 117 ~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 117 DLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp GGTHHHHHHHSCTTCEEEEE
T ss_pred HHHHHHHHHhccCCCEEEEE
Confidence 46789999999999999985
No 369
>3t6o_A Sulfate transporter/antisigma-factor antagonist S; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.10A {Planctomyces limnophilus}
Probab=29.33 E-value=46 Score=19.18 Aligned_cols=33 Identities=12% Similarity=0.183 Sum_probs=21.1
Q ss_pred cEEEEccChH-------HHHHHHHHhcc--CCCEEEEecCCC
Q 034260 6 DVSFDCAGLN-------KTMSTVLDATR--AGDKVCLVGMGH 38 (100)
Q Consensus 6 D~vie~~G~~-------~~~~~al~~l~--~gGrvv~vG~~~ 38 (100)
.+++|+++.. ..+....+.++ .|++++++|..+
T Consensus 50 ~vvlDls~v~~iDSsGl~~L~~~~~~~~~~~g~~l~l~~~~~ 91 (121)
T 3t6o_A 50 KVLIDLEGVEFFGSSFIELLVRGWKRIKEDQQGVFALCSVSP 91 (121)
T ss_dssp EEEEECTTCCEECHHHHHHHHHHHHHHTTSTTCEEEEESCCH
T ss_pred eEEEECCCCCEEcHHHHHHHHHHHHHHHHhcCCEEEEEeCCH
Confidence 4677776654 24455555554 588999988764
No 370
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=29.21 E-value=21 Score=23.28 Aligned_cols=18 Identities=17% Similarity=0.235 Sum_probs=16.0
Q ss_pred HHHHHHHHhccCCCEEEE
Q 034260 16 KTMSTVLDATRAGDKVCL 33 (100)
Q Consensus 16 ~~~~~al~~l~~gGrvv~ 33 (100)
..+++.-+.|+|||++++
T Consensus 120 ~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 120 DILSNVADLAKKEAHFEF 137 (225)
T ss_dssp HHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEE
Confidence 467888899999999998
No 371
>4dgh_A Sulfate permease family protein; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.90A {Vibrio cholerae} PDB: 3mgl_A*
Probab=29.19 E-value=28 Score=20.44 Aligned_cols=33 Identities=15% Similarity=0.223 Sum_probs=20.4
Q ss_pred cEEEEccChH-------HHHHHHHHhc-cCCCEEEEecCCC
Q 034260 6 DVSFDCAGLN-------KTMSTVLDAT-RAGDKVCLVGMGH 38 (100)
Q Consensus 6 D~vie~~G~~-------~~~~~al~~l-~~gGrvv~vG~~~ 38 (100)
.+++|+++.. ..+....+.+ +.|++++++|...
T Consensus 51 ~vvlDls~v~~iDssgl~~L~~~~~~~~~~g~~l~l~~~~~ 91 (130)
T 4dgh_A 51 ILILRLKWVPFMDITGIQTLEEMIQSFHKRGIKVLISGANS 91 (130)
T ss_dssp EEEEECTTCCCCCHHHHHHHHHHHHHHHTTTCEEEEECCCH
T ss_pred EEEEECCCCCcccHHHHHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4677776654 2344444444 5688888888764
No 372
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=29.10 E-value=28 Score=24.65 Aligned_cols=24 Identities=8% Similarity=0.052 Sum_probs=19.1
Q ss_pred HHHHHHHHHhccCCCEEEEecCCC
Q 034260 15 NKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 15 ~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
...+..+++.++|||.+++.....
T Consensus 315 ~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 315 FNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp HHHHHHHHTTEEEEEEEEEEECCT
T ss_pred HHHHHHHHHhcCCCcEEEEEECCC
Confidence 356788999999999998876554
No 373
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=29.09 E-value=42 Score=22.62 Aligned_cols=31 Identities=6% Similarity=-0.068 Sum_probs=22.7
Q ss_pred cccEEEEccCh----------HHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGL----------NKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~----------~~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+-.-.- ...++++.+.|+|||.+++.
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGT 154 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 57888764322 25678888999999999865
No 374
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=29.03 E-value=59 Score=22.65 Aligned_cols=30 Identities=17% Similarity=0.190 Sum_probs=24.4
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+.|+......+.+.++++.| +-|++
T Consensus 65 ~~D~V~i~tp~~~h~~~~~~al~aG-khVl~ 94 (359)
T 3e18_A 65 KVDAVLIATPNDSHKELAISALEAG-KHVVC 94 (359)
T ss_dssp TCCEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred CCCEEEEcCCcHHHHHHHHHHHHCC-CCEEe
Confidence 5899999999988888888888865 55554
No 375
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=28.88 E-value=45 Score=24.30 Aligned_cols=29 Identities=24% Similarity=0.232 Sum_probs=22.0
Q ss_pred ccEEEEccChHHHHHHHHHhccCCCEEEE
Q 034260 5 IDVSFDCAGLNKTMSTVLDATRAGDKVCL 33 (100)
Q Consensus 5 ~D~vie~~G~~~~~~~al~~l~~gGrvv~ 33 (100)
+|+|++|++....+..++++++.|=+|++
T Consensus 94 iDvVV~ai~G~aGl~ptlaAi~aGK~Vvl 122 (388)
T 1r0k_A 94 ADWTMAAIIGCAGLKATLAAIRKGKTVAL 122 (388)
T ss_dssp CSEEEECCCSGGGHHHHHHHHHTTSEEEE
T ss_pred CCEEEEeCCCHHHHHHHHHHHHCCCEEEE
Confidence 79999999334567888888887766665
No 376
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=28.86 E-value=67 Score=22.23 Aligned_cols=30 Identities=20% Similarity=0.186 Sum_probs=22.3
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+.|+......+.+.++++.| +-|++
T Consensus 71 ~~D~V~i~tp~~~h~~~~~~al~aG-k~V~~ 100 (362)
T 1ydw_A 71 EIDALYVPLPTSLHVEWAIKAAEKG-KHILL 100 (362)
T ss_dssp TCCEEEECCCGGGHHHHHHHHHTTT-CEEEE
T ss_pred CCCEEEEcCChHHHHHHHHHHHHCC-CeEEE
Confidence 4799999999877777777777654 55555
No 377
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=28.43 E-value=67 Score=21.82 Aligned_cols=31 Identities=16% Similarity=0.206 Sum_probs=23.1
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|+.|+......+.+.++++.| +-|++-
T Consensus 62 ~~D~V~i~tp~~~h~~~~~~al~~g-k~V~~E 92 (325)
T 2ho3_A 62 SFDLVYIASPNSLHFAQAKAALSAG-KHVILE 92 (325)
T ss_dssp SCSEEEECSCGGGHHHHHHHHHHTT-CEEEEE
T ss_pred CCCEEEEeCChHHHHHHHHHHHHcC-CcEEEe
Confidence 5899999999877777777777664 555553
No 378
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=28.28 E-value=61 Score=21.98 Aligned_cols=30 Identities=20% Similarity=0.226 Sum_probs=23.1
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+.|+......+.+.++++.| +-|++
T Consensus 69 ~~D~V~i~tp~~~h~~~~~~al~~G-k~v~~ 98 (315)
T 3c1a_A 69 EVEAVIIATPPATHAEITLAAIASG-KAVLV 98 (315)
T ss_dssp TCCEEEEESCGGGHHHHHHHHHHTT-CEEEE
T ss_pred CCCEEEEeCChHHHHHHHHHHHHCC-CcEEE
Confidence 5899999999887777777777765 54544
No 379
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=28.25 E-value=64 Score=21.74 Aligned_cols=30 Identities=13% Similarity=0.034 Sum_probs=23.3
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+.|+......+.+.++++.| +-|++
T Consensus 66 ~~D~V~i~tp~~~h~~~~~~al~~g-k~vl~ 95 (308)
T 3uuw_A 66 KCDCIFLHSSTETHYEIIKILLNLG-VHVYV 95 (308)
T ss_dssp TCSEEEECCCGGGHHHHHHHHHHTT-CEEEE
T ss_pred cCCEEEEeCCcHhHHHHHHHHHHCC-CcEEE
Confidence 5799999999988888888887765 44554
No 380
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=28.09 E-value=1.1e+02 Score=20.37 Aligned_cols=36 Identities=8% Similarity=-0.067 Sum_probs=24.1
Q ss_pred CcccEEEE--ccC----hHHHHHHHHHhcc---C--CCEEEEecCCC
Q 034260 3 AGIDVSFD--CAG----LNKTMSTVLDATR---A--GDKVCLVGMGH 38 (100)
Q Consensus 3 ~G~D~vie--~~G----~~~~~~~al~~l~---~--gGrvv~vG~~~ 38 (100)
..+|+|+- +.= ....++...++++ + +|+++++-...
T Consensus 162 ~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~ 208 (281)
T 3bzb_A 162 QRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHH 208 (281)
T ss_dssp SSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC-
T ss_pred CCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEee
Confidence 35788873 322 2356778888899 9 99988765443
No 381
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=28.01 E-value=43 Score=23.13 Aligned_cols=23 Identities=22% Similarity=0.352 Sum_probs=18.5
Q ss_pred HHHHHHHHhccCCCEEEEecCCC
Q 034260 16 KTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 16 ~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
..++.+.++++|||+++++-...
T Consensus 276 ~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 276 IMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp HHHHHHHTTCCTTCEEEEEEECC
T ss_pred HHHHHHHHhcCCCCEEEEEeccc
Confidence 46788889999999998876443
No 382
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=27.93 E-value=88 Score=21.76 Aligned_cols=35 Identities=17% Similarity=0.185 Sum_probs=23.7
Q ss_pred cccEEEEccChHH------------------HHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCAGLNK------------------TMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G~~~------------------~~~~al~~l~~gGrvv~vG~~~ 38 (100)
++|+|+-|+|.+. .+-..+.-..|.+.+++++.|-
T Consensus 69 ~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv 121 (314)
T 3nep_X 69 DSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPL 121 (314)
T ss_dssp TCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSSH
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCch
Confidence 6899999999763 1223444457899999887553
No 383
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=27.91 E-value=58 Score=23.05 Aligned_cols=35 Identities=14% Similarity=-0.057 Sum_probs=24.5
Q ss_pred CcccEEEEccChHH------------------HHHHHHHhccCCCEEEEecCC
Q 034260 3 AGIDVSFDCAGLNK------------------TMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 3 ~G~D~vie~~G~~~------------------~~~~al~~l~~gGrvv~vG~~ 37 (100)
+++|+|+.|+|.+. .+-..+....|.+.+++++.+
T Consensus 88 ~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNP 140 (330)
T 3ldh_A 88 AGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPEL 140 (330)
T ss_dssp SSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred CCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCc
Confidence 36899999988752 222344445899999998855
No 384
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=27.75 E-value=80 Score=17.25 Aligned_cols=52 Identities=12% Similarity=0.123 Sum_probs=32.6
Q ss_pred cccEEEEccChH--H---HHHHHHHhccCCCEEEEecCCCCCcccChHHH-HhcCcEEE
Q 034260 4 GIDVSFDCAGLN--K---TMSTVLDATRAGDKVCLVGMGHHDMTVPLTPA-AARYLIYG 56 (100)
Q Consensus 4 G~D~vie~~G~~--~---~~~~al~~l~~gGrvv~vG~~~~~~~i~~~~l-~~k~~~i~ 56 (100)
.+|..+|+.|.. . -...+++.+.+|.++.++.-... ..-++..+ -..+.++.
T Consensus 8 ~~~~~lD~rGl~CP~Pvl~~kkal~~l~~G~~l~V~~dd~~-a~~di~~~~~~~G~~~~ 65 (82)
T 3lvj_C 8 SPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIADDPA-TTRDIPGFCTFMEHELV 65 (82)
T ss_dssp CCSEEEECTTCCTTHHHHHHHHHHHTSCTTCEEEEEECCTT-HHHHHHHHHHHTTCEEE
T ss_pred CCCEEEECCCCCCCHHHHHHHHHHHhCCCCCEEEEEECCcc-HHHHHHHHHHHCCCEEE
Confidence 368999999943 2 25777888888988888764433 22234333 34455555
No 385
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=27.66 E-value=57 Score=22.87 Aligned_cols=25 Identities=16% Similarity=0.236 Sum_probs=15.3
Q ss_pred cccEEEEccChHH----HHHHHHHhccCC
Q 034260 4 GIDVSFDCAGLNK----TMSTVLDATRAG 28 (100)
Q Consensus 4 G~D~vie~~G~~~----~~~~al~~l~~g 28 (100)
.+|+|+||++... ..+.+.++++.|
T Consensus 80 ~iDvVv~~tp~~~h~~~a~~~~~~aL~aG 108 (327)
T 3do5_A 80 DYDVLIEASVTRVDGGEGVNYIREALKRG 108 (327)
T ss_dssp CCSEEEECCCCC----CHHHHHHHHHTTT
T ss_pred CCCEEEECCCCcccchhHHHHHHHHHHCC
Confidence 4799999996432 245555555544
No 386
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=27.50 E-value=88 Score=21.40 Aligned_cols=31 Identities=19% Similarity=0.238 Sum_probs=23.5
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~v 34 (100)
.+|++++++....+.+...++++.|=+.+++
T Consensus 64 ~~Dv~Ii~vp~~~~~~~~~ea~~~Gi~~vVi 94 (288)
T 1oi7_A 64 EVDASIIFVPAPAAADAALEAAHAGIPLIVL 94 (288)
T ss_dssp CCSEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 6899999999887777777777777664444
No 387
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=27.46 E-value=56 Score=21.92 Aligned_cols=24 Identities=13% Similarity=0.263 Sum_probs=19.6
Q ss_pred HHHHHHHHHhccCCCEEEEecCCC
Q 034260 15 NKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 15 ~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
...+++..+.++|||++++.-...
T Consensus 176 ~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 176 DRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred HHHHHHHHHhCCCCcEEEEEEecC
Confidence 467899999999999999875443
No 388
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=27.32 E-value=57 Score=22.55 Aligned_cols=30 Identities=23% Similarity=0.179 Sum_probs=24.3
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+.|+......+.+.++++.| +-|++
T Consensus 67 ~vD~V~i~tp~~~H~~~~~~al~aG-khV~~ 96 (352)
T 3kux_A 67 SIDLIVIPTPNDTHFPLAQSALAAG-KHVVV 96 (352)
T ss_dssp SCCEEEECSCTTTHHHHHHHHHHTT-CEEEE
T ss_pred CCCEEEEeCChHHHHHHHHHHHHCC-CcEEE
Confidence 5899999999888888888888776 55555
No 389
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=27.20 E-value=51 Score=24.32 Aligned_cols=31 Identities=23% Similarity=0.312 Sum_probs=20.4
Q ss_pred cccEEEEccCh-HHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDCAGL-NKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G~-~~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|+||++. ....+.+.++++.| +-|++.
T Consensus 78 diDvVve~tp~~~~h~~~~~~AL~aG-KhVvte 109 (444)
T 3mtj_A 78 EIDIVVELIGGLEPARELVMQAIANG-KHVVTA 109 (444)
T ss_dssp TCCEEEECCCSSTTHHHHHHHHHHTT-CEEEEC
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHcC-CEEEEC
Confidence 57999999986 45556666666554 444444
No 390
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=27.20 E-value=67 Score=22.28 Aligned_cols=30 Identities=23% Similarity=0.140 Sum_probs=23.6
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+.|+......+.+.++++.| +-|++
T Consensus 89 ~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~ 118 (350)
T 3rc1_A 89 DVDAVYVPLPAVLHAEWIDRALRAG-KHVLA 118 (350)
T ss_dssp TCSEEEECCCGGGHHHHHHHHHHTT-CEEEE
T ss_pred CCCEEEECCCcHHHHHHHHHHHHCC-CcEEE
Confidence 5899999999988888888888765 44544
No 391
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=27.12 E-value=67 Score=22.04 Aligned_cols=38 Identities=18% Similarity=0.170 Sum_probs=27.3
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccCh
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPL 45 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~ 45 (100)
.+|+|+.|+......+.+.++++.| +-|++ .+|+..+.
T Consensus 66 ~~D~V~i~tp~~~h~~~~~~al~~G-k~vl~---EKP~a~~~ 103 (344)
T 3mz0_A 66 NVDAVLVTSWGPAHESSVLKAIKAQ-KYVFC---EKPLATTA 103 (344)
T ss_dssp TCCEEEECSCGGGHHHHHHHHHHTT-CEEEE---CSCSCSSH
T ss_pred CCCEEEECCCchhHHHHHHHHHHCC-CcEEE---cCCCCCCH
Confidence 4899999999988888888888766 44554 34444443
No 392
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=27.10 E-value=67 Score=18.33 Aligned_cols=12 Identities=17% Similarity=0.252 Sum_probs=9.7
Q ss_pred cccEEEEccChH
Q 034260 4 GIDVSFDCAGLN 15 (100)
Q Consensus 4 G~D~vie~~G~~ 15 (100)
++|+++.|++.+
T Consensus 70 ~~d~vi~~~~~~ 81 (144)
T 2hmt_A 70 NFEYVIVAIGAN 81 (144)
T ss_dssp GCSEEEECCCSC
T ss_pred CCCEEEECCCCc
Confidence 588999999864
No 393
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=26.93 E-value=81 Score=21.18 Aligned_cols=31 Identities=10% Similarity=-0.094 Sum_probs=21.3
Q ss_pred cccEEEEcc----ChH--------HHHHHHHHhccCCC--EEEEe
Q 034260 4 GIDVSFDCA----GLN--------KTMSTVLDATRAGD--KVCLV 34 (100)
Q Consensus 4 G~D~vie~~----G~~--------~~~~~al~~l~~gG--rvv~v 34 (100)
.+|+|+-.. |.. .+++.+.+.|+||| ++++-
T Consensus 140 ~fD~V~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~k 184 (265)
T 2oxt_A 140 RTDVIMCDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVVK 184 (265)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CCcEEEEeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEE
Confidence 578877532 222 25677789999999 88763
No 394
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=26.90 E-value=31 Score=22.99 Aligned_cols=33 Identities=12% Similarity=0.179 Sum_probs=24.2
Q ss_pred cccEEEEccC------hHHHHHHHHHhccCCCEEEEecC
Q 034260 4 GIDVSFDCAG------LNKTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 4 G~D~vie~~G------~~~~~~~al~~l~~gGrvv~vG~ 36 (100)
.+|+|+-... ....++++.+.++|||+++++-.
T Consensus 89 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 127 (284)
T 3gu3_A 89 KYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEP 127 (284)
T ss_dssp CEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEec
Confidence 4677665322 24678999999999999997643
No 395
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=26.79 E-value=50 Score=22.87 Aligned_cols=32 Identities=16% Similarity=0.192 Sum_probs=23.8
Q ss_pred cccEEE-Ecc---Ch------HHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSF-DCA---GL------NKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vi-e~~---G~------~~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|+ |.. +. ...++.+.+.+++||.+++-.
T Consensus 189 ~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 189 TYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp CEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 578877 332 11 467889999999999999864
No 396
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=26.74 E-value=68 Score=22.28 Aligned_cols=30 Identities=17% Similarity=0.165 Sum_probs=24.2
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+.|+......+.+.++++.| +-|++
T Consensus 87 ~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~ 116 (357)
T 3ec7_A 87 DVEVVIITASNEAHADVAVAALNAN-KYVFC 116 (357)
T ss_dssp TCCEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred CCCEEEEcCCcHHHHHHHHHHHHCC-CCEEe
Confidence 5899999999988888888888876 44554
No 397
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=26.58 E-value=48 Score=22.77 Aligned_cols=21 Identities=10% Similarity=-0.007 Sum_probs=17.9
Q ss_pred HHHHHHHHHhccCCCEEEEec
Q 034260 15 NKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 15 ~~~~~~al~~l~~gGrvv~vG 35 (100)
...++.+.+.|++||.+++-.
T Consensus 175 ~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 175 VEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp HHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHhcCCCcEEEEEc
Confidence 456899999999999999864
No 398
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=26.51 E-value=71 Score=21.82 Aligned_cols=38 Identities=18% Similarity=0.063 Sum_probs=27.7
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccCh
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPL 45 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~ 45 (100)
.+|+|+.|+......+.++++++.| +-|++ .+|...+.
T Consensus 66 ~~D~V~i~tp~~~h~~~~~~al~aG-khVl~---EKP~a~~~ 103 (336)
T 2p2s_A 66 SIDLIACAVIPCDRAELALRTLDAG-KDFFT---AKPPLTTL 103 (336)
T ss_dssp TCCEEEECSCGGGHHHHHHHHHHTT-CEEEE---CSSCCSCH
T ss_pred CCCEEEEeCChhhHHHHHHHHHHCC-CcEEE---eCCCCCCH
Confidence 5899999999888888888888764 55555 34444444
No 399
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=26.47 E-value=57 Score=22.98 Aligned_cols=23 Identities=9% Similarity=0.174 Sum_probs=18.7
Q ss_pred HHHHHHHHhccCCCEEEEecCCC
Q 034260 16 KTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 16 ~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
..+..+.+.++|||.+++.....
T Consensus 306 ~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 306 EVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp HHHHHHHHTEEEEEEEEEEECCT
T ss_pred HHHHHHHHhcCCCCEEEEEECCC
Confidence 46788999999999998876554
No 400
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=26.39 E-value=74 Score=23.26 Aligned_cols=30 Identities=3% Similarity=0.045 Sum_probs=17.8
Q ss_pred cccEEEEccChHH-----HHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLNK-----TMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~~-----~~~~al~~l~~gGrvv~v 34 (100)
.+|+||+|+.... .+++.-+.+++ +.+++.
T Consensus 114 ~aDlVIeaVpe~~~~k~~v~~~l~~~~~~-~~ii~s 148 (463)
T 1zcj_A 114 TVDLVVEAVFEDMNLKKKVFAELSALCKP-GAFLCT 148 (463)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHHHSCT-TCEEEE
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhhCCC-CeEEEe
Confidence 5899999998753 22333334444 555554
No 401
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=26.34 E-value=43 Score=21.12 Aligned_cols=34 Identities=15% Similarity=0.128 Sum_probs=20.7
Q ss_pred ccEEEEccC----h-HHHHHHH--HHhccCCCEEEEecCCC
Q 034260 5 IDVSFDCAG----L-NKTMSTV--LDATRAGDKVCLVGMGH 38 (100)
Q Consensus 5 ~D~vie~~G----~-~~~~~~a--l~~l~~gGrvv~vG~~~ 38 (100)
+|+|+-... . ...++.. .+.++|||++++.-...
T Consensus 126 fD~I~~~~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 126 FDVVFLDPPFHFNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp EEEEEECCCSSSCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCEEEECCCCCCccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 788775332 1 2344444 23589999998765443
No 402
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=26.29 E-value=53 Score=20.16 Aligned_cols=35 Identities=11% Similarity=0.137 Sum_probs=23.2
Q ss_pred CcccEEEEcc---C----hHHHHHHHHH--hccCCCEEEEecCC
Q 034260 3 AGIDVSFDCA---G----LNKTMSTVLD--ATRAGDKVCLVGMG 37 (100)
Q Consensus 3 ~G~D~vie~~---G----~~~~~~~al~--~l~~gGrvv~vG~~ 37 (100)
..+|+|+-.. . ....++...+ .++|||++++--..
T Consensus 112 ~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 112 SPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp SCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred CCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 4578877531 1 2245666666 89999999986443
No 403
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=26.18 E-value=64 Score=22.52 Aligned_cols=35 Identities=17% Similarity=0.135 Sum_probs=23.7
Q ss_pred CcccEEEEccChHH------------------HHHHHHHhccCCCEEEEecCC
Q 034260 3 AGIDVSFDCAGLNK------------------TMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 3 ~G~D~vie~~G~~~------------------~~~~al~~l~~gGrvv~vG~~ 37 (100)
+++|+|+-|+|.+. .+-..+.-..|.+.+++++.+
T Consensus 72 ~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNP 124 (321)
T 3p7m_A 72 ENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNP 124 (321)
T ss_dssp TTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred CCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCc
Confidence 36899999988641 122344444699999998644
No 404
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=26.08 E-value=72 Score=22.16 Aligned_cols=30 Identities=27% Similarity=0.107 Sum_probs=24.4
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+.|+......+.+.++++.| +-|++
T Consensus 65 ~vD~V~i~tp~~~H~~~~~~al~aG-khVl~ 94 (362)
T 3fhl_A 65 EIDLIVVNTPDNTHYEYAGMALEAG-KNVVV 94 (362)
T ss_dssp TCCEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred CCCEEEEeCChHHHHHHHHHHHHCC-CeEEE
Confidence 5899999999988888888888865 55555
No 405
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=26.03 E-value=77 Score=21.80 Aligned_cols=30 Identities=23% Similarity=0.237 Sum_probs=23.3
Q ss_pred ccEEEEccChHHHHHHHHHhccCCCEEEEe
Q 034260 5 IDVSFDCAGLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 5 ~D~vie~~G~~~~~~~al~~l~~gGrvv~v 34 (100)
+|++++++....+.+...++++.|=+.+++
T Consensus 72 ~DvaIi~vp~~~~~~~v~ea~~~Gi~~vVi 101 (297)
T 2yv2_A 72 INTSIVFVPAPFAPDAVYEAVDAGIRLVVV 101 (297)
T ss_dssp CCEEEECCCGGGHHHHHHHHHHTTCSEEEE
T ss_pred CCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 899999999887777777777777664444
No 406
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=26.03 E-value=37 Score=23.54 Aligned_cols=20 Identities=15% Similarity=0.232 Sum_probs=17.6
Q ss_pred HHHHHHHHHhccCCCEEEEe
Q 034260 15 NKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 15 ~~~~~~al~~l~~gGrvv~v 34 (100)
...+.+..+.|+|||+++++
T Consensus 165 ~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 165 NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp GGTHHHHHHHSCTTCEEEEE
T ss_pred HHHHHHHHHHcCcCCEEEEE
Confidence 45789999999999999986
No 407
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=25.90 E-value=76 Score=22.10 Aligned_cols=38 Identities=18% Similarity=0.168 Sum_probs=28.0
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccCh
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPL 45 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~ 45 (100)
.+|+|+.|+......+.+.++++.| +-|++ .+|+..+.
T Consensus 67 ~~D~V~i~tp~~~H~~~~~~al~aG-k~Vl~---EKPla~~~ 104 (364)
T 3e82_A 67 DVDLVVIASPNATHAPLARLALNAG-KHVVV---DKPFTLDM 104 (364)
T ss_dssp TCSEEEECSCGGGHHHHHHHHHHTT-CEEEE---CSCSCSSH
T ss_pred CCCEEEEeCChHHHHHHHHHHHHCC-CcEEE---eCCCcCCH
Confidence 5899999999988888888888765 55655 34444444
No 408
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=25.87 E-value=59 Score=21.87 Aligned_cols=21 Identities=5% Similarity=-0.069 Sum_probs=15.1
Q ss_pred HHHHHHhccCCCEEEEecCCC
Q 034260 18 MSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 18 ~~~al~~l~~gGrvv~vG~~~ 38 (100)
.+.++..++++|+++.++...
T Consensus 152 ~~~~~~~m~~~g~Iv~isS~~ 172 (293)
T 3grk_A 152 SRRAEKLMADGGSILTLTYYG 172 (293)
T ss_dssp HHHHHHHTTTCEEEEEEECGG
T ss_pred HHHHHHhccCCCEEEEEeehh
Confidence 345566667899999998643
No 409
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=25.83 E-value=45 Score=22.24 Aligned_cols=23 Identities=26% Similarity=0.280 Sum_probs=15.2
Q ss_pred cccEEEEccChHHHHHHHHHhcc
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATR 26 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~ 26 (100)
++|+|++|+....+....-+.++
T Consensus 118 ~~DvVi~~~d~~~~r~~l~~~~~ 140 (251)
T 1zud_1 118 RADVVLDCTDNMATRQEINAACV 140 (251)
T ss_dssp HCSEEEECCSSHHHHHHHHHHHH
T ss_pred cCCEEEECCCCHHHHHHHHHHHH
Confidence 47999999998765433333333
No 410
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=25.58 E-value=77 Score=20.98 Aligned_cols=34 Identities=18% Similarity=0.421 Sum_probs=24.6
Q ss_pred cccEEEEccChH----------H---------------HHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCAGLN----------K---------------TMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~G~~----------~---------------~~~~al~~l~~gGrvv~vG~~ 37 (100)
++|+++.++|.. + ..+.++..++++|+++.++..
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~ 167 (271)
T 3v2g_A 109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSN 167 (271)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCG
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeCh
Confidence 589999998841 1 345566677789999999763
No 411
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=25.55 E-value=64 Score=22.43 Aligned_cols=38 Identities=16% Similarity=0.211 Sum_probs=28.0
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccCh
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPL 45 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~ 45 (100)
.+|+|+.|++.....+.+.++++.| +-|++ .+|+..+.
T Consensus 65 ~vD~V~i~tp~~~H~~~~~~al~aG-khVl~---EKPla~~~ 102 (358)
T 3gdo_A 65 AIELVIVTTPSGLHYEHTMACIQAG-KHVVM---EKPMTATA 102 (358)
T ss_dssp TCCEEEECSCTTTHHHHHHHHHHTT-CEEEE---ESSCCSSH
T ss_pred CCCEEEEcCCcHHHHHHHHHHHHcC-CeEEE---ecCCcCCH
Confidence 5899999999988888888888776 55555 34444444
No 412
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=25.53 E-value=1.2e+02 Score=20.90 Aligned_cols=34 Identities=9% Similarity=-0.046 Sum_probs=21.2
Q ss_pred CcccEEEEccChHH-----------------HHHHHHHhccCCCEEEEecC
Q 034260 3 AGIDVSFDCAGLNK-----------------TMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 3 ~G~D~vie~~G~~~-----------------~~~~al~~l~~gGrvv~vG~ 36 (100)
+++|+|++++|.+. .+-..++...|.+.++++..
T Consensus 76 ~~aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sN 126 (303)
T 2i6t_A 76 AHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQ 126 (303)
T ss_dssp TTCSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSS
T ss_pred CCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCC
Confidence 36899999996532 12223333358998887665
No 413
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=25.43 E-value=32 Score=21.82 Aligned_cols=33 Identities=6% Similarity=0.074 Sum_probs=23.1
Q ss_pred CcccEEEEccC------h----HHHHHHHHHhccCCCEEEEec
Q 034260 3 AGIDVSFDCAG------L----NKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 3 ~G~D~vie~~G------~----~~~~~~al~~l~~gGrvv~vG 35 (100)
..+|+|+-+.+ . ...++.+.+.++|||++++.-
T Consensus 99 ~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 99 RKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 35788883222 1 246788889999999998753
No 414
>4hyl_A Stage II sporulation protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 1.75A {Haliangium ochraceum}
Probab=25.42 E-value=43 Score=19.02 Aligned_cols=33 Identities=15% Similarity=0.324 Sum_probs=19.3
Q ss_pred cEEEEccChH-------HHHHHHHHhc-cCCCEEEEecCCC
Q 034260 6 DVSFDCAGLN-------KTMSTVLDAT-RAGDKVCLVGMGH 38 (100)
Q Consensus 6 D~vie~~G~~-------~~~~~al~~l-~~gGrvv~vG~~~ 38 (100)
.+++|+++.. ..+....+.+ +.|+++.++|..+
T Consensus 44 ~vvlDls~v~~iDssgl~~L~~~~~~~~~~g~~l~l~~~~~ 84 (117)
T 4hyl_A 44 KMILDLREVSYMSSAGLRVLLSLYRHTSNQQGALVLVGVSE 84 (117)
T ss_dssp EEEEEEEEEEEECHHHHHHHHHHHHHHHHTTCEEEEECCCH
T ss_pred eEEEECCCCcEEcHHHHHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 4566665543 2344444444 4778888888654
No 415
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=25.36 E-value=1.1e+02 Score=21.01 Aligned_cols=34 Identities=9% Similarity=-0.059 Sum_probs=22.1
Q ss_pred cccEEEEccChHH---HHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCAGLNK---TMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~G~~~---~~~~al~~l~~gGrvv~vG~~ 37 (100)
.+|+||.|+.... .+++....++++..++-++..
T Consensus 94 ~aDvVilavp~~~~~~vl~~l~~~l~~~~iv~d~~Sv 130 (314)
T 3ggo_A 94 SPDFVMLSSPVRTFREIAKKLSYILSEDATVTDQGSV 130 (314)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHHSCTTCEEEECCSC
T ss_pred cCCEEEEeCCHHHHHHHHHHHhhccCCCcEEEECCCC
Confidence 5899999998753 344444556777666555533
No 416
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=25.36 E-value=66 Score=22.14 Aligned_cols=38 Identities=24% Similarity=0.321 Sum_probs=27.7
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccCh
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPL 45 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~ 45 (100)
.+|+|+.|++.....+.+.++++.| +-|++ .+|+..+.
T Consensus 65 ~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~---EKP~a~~~ 102 (345)
T 3f4l_A 65 DVKLVVVCTHADSHFEYAKRALEAG-KNVLV---EKPFTPTL 102 (345)
T ss_dssp TEEEEEECSCGGGHHHHHHHHHHTT-CEEEE---CSSSCSSH
T ss_pred CCCEEEEcCChHHHHHHHHHHHHcC-CcEEE---eCCCCCCH
Confidence 5899999999988888888888776 55554 24444444
No 417
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=25.17 E-value=37 Score=22.27 Aligned_cols=20 Identities=15% Similarity=0.157 Sum_probs=17.4
Q ss_pred HHHHHHHHhccCCCEEEEec
Q 034260 16 KTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 16 ~~~~~al~~l~~gGrvv~vG 35 (100)
..++.+.+.|++||++++..
T Consensus 149 ~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 149 TLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHCCCCCEEEEEe
Confidence 57888999999999999864
No 418
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=25.14 E-value=38 Score=21.45 Aligned_cols=34 Identities=6% Similarity=0.115 Sum_probs=24.8
Q ss_pred cccEEEEccC------hHHHHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCAG------LNKTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~G------~~~~~~~al~~l~~gGrvv~vG~~ 37 (100)
.+|+|+-... ....++++.+++++||++++.-..
T Consensus 102 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 102 SFDFALMVTTICFVDDPERALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp CEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CeeEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEEEEeC
Confidence 4788775422 245788899999999999987543
No 419
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=25.10 E-value=33 Score=21.51 Aligned_cols=32 Identities=6% Similarity=0.087 Sum_probs=23.0
Q ss_pred CcccEEEEcc-----Ch----HHHHHHHHHhccCCCEEEEe
Q 034260 3 AGIDVSFDCA-----GL----NKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 3 ~G~D~vie~~-----G~----~~~~~~al~~l~~gGrvv~v 34 (100)
..+|+|+-.. .. ...++++.+.+++||++++.
T Consensus 113 ~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 153 (216)
T 3ofk_A 113 ELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFG 153 (216)
T ss_dssp CCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 3578877641 22 24588889999999999974
No 420
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=25.02 E-value=33 Score=22.92 Aligned_cols=34 Identities=12% Similarity=0.035 Sum_probs=23.5
Q ss_pred CcccEEEEcc------C---hHHHHHHHHHhccCCCEEEEecC
Q 034260 3 AGIDVSFDCA------G---LNKTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 3 ~G~D~vie~~------G---~~~~~~~al~~l~~gGrvv~vG~ 36 (100)
..+|+|+-+. . ....++++.+.|+|||++++.-.
T Consensus 149 ~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 191 (299)
T 3g2m_A 149 KRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLA 191 (299)
T ss_dssp CCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEee
Confidence 3578776431 1 13567888899999999987543
No 421
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=24.87 E-value=53 Score=22.92 Aligned_cols=34 Identities=12% Similarity=0.179 Sum_probs=24.4
Q ss_pred cccEEEEcc-----ChH---HHHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCA-----GLN---KTMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~-----G~~---~~~~~al~~l~~gGrvv~vG~~ 37 (100)
++|+++-.- ..+ ..++.+.++++|||+++++-..
T Consensus 268 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~ 309 (369)
T 3gwz_A 268 GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNL 309 (369)
T ss_dssp SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEB
T ss_pred CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 578876532 222 4688889999999999997543
No 422
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=24.83 E-value=70 Score=22.39 Aligned_cols=36 Identities=17% Similarity=0.148 Sum_probs=24.2
Q ss_pred CcccEEEEccChHH------------------HHHHHHHhccCCCEEEEecCCC
Q 034260 3 AGIDVSFDCAGLNK------------------TMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 3 ~G~D~vie~~G~~~------------------~~~~al~~l~~gGrvv~vG~~~ 38 (100)
+++|+|+-|+|.+. .+-..+.-..|.+.+++++.+.
T Consensus 74 ~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNPv 127 (324)
T 3gvi_A 74 EGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPL 127 (324)
T ss_dssp TTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred CCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCCc
Confidence 36899999998541 1223344446999999988553
No 423
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=24.75 E-value=1e+02 Score=21.33 Aligned_cols=13 Identities=46% Similarity=0.626 Sum_probs=10.2
Q ss_pred CcccEEEEccChH
Q 034260 3 AGIDVSFDCAGLN 15 (100)
Q Consensus 3 ~G~D~vie~~G~~ 15 (100)
.++|+|++|+|.+
T Consensus 71 ~~aD~Vi~a~g~p 83 (322)
T 1t2d_A 71 AGADVVIVTAGFT 83 (322)
T ss_dssp TTCSEEEECCSCS
T ss_pred CCCCEEEEeCCCC
Confidence 3689999998554
No 424
>3llo_A Prestin; STAS domain, cell shape, glycoprotein, membrane, motor prote transmembrane; HET: BOG; 1.57A {Rattus norvegicus}
Probab=24.71 E-value=38 Score=20.14 Aligned_cols=33 Identities=27% Similarity=0.380 Sum_probs=21.1
Q ss_pred cEEEEccChH-------HHHHHHHHhc-cCCCEEEEecCCC
Q 034260 6 DVSFDCAGLN-------KTMSTVLDAT-RAGDKVCLVGMGH 38 (100)
Q Consensus 6 D~vie~~G~~-------~~~~~al~~l-~~gGrvv~vG~~~ 38 (100)
.+++|+++.. .++....+.+ +.|++++++|...
T Consensus 66 ~vvlDls~v~~iDssgl~~L~~~~~~~~~~g~~l~l~~~~~ 106 (143)
T 3llo_A 66 TVILDFTQVNFMDSVGVKTLAGIVKEYGDVGIYVYLAGCSA 106 (143)
T ss_dssp EEEEECTTCCCCCHHHHHHHHHHHHHHHTTTCEEEEESCCH
T ss_pred EEEEECCCCccccHHHHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5788887754 2344444443 5778899888664
No 425
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=24.68 E-value=37 Score=20.53 Aligned_cols=36 Identities=11% Similarity=-0.022 Sum_probs=21.7
Q ss_pred cccEEEEccC-----hHHHHHHHH--HhccCCCEEEEecCCCC
Q 034260 4 GIDVSFDCAG-----LNKTMSTVL--DATRAGDKVCLVGMGHH 39 (100)
Q Consensus 4 G~D~vie~~G-----~~~~~~~al--~~l~~gGrvv~vG~~~~ 39 (100)
.+|+|+-... ....++... +.+++||++++.-....
T Consensus 100 ~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 100 RFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred CCCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 4788775422 123344444 77899999988654443
No 426
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=24.57 E-value=99 Score=21.25 Aligned_cols=30 Identities=23% Similarity=0.235 Sum_probs=24.5
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+.|+......+.+.++++.| +-|++
T Consensus 81 ~vD~V~i~tp~~~H~~~~~~al~aG-khVl~ 110 (330)
T 4ew6_A 81 SIDAVSLCMPPQYRYEAAYKALVAG-KHVFL 110 (330)
T ss_dssp TCCEEEECSCHHHHHHHHHHHHHTT-CEEEE
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHcC-CcEEE
Confidence 5899999999888888888888876 55554
No 427
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=24.52 E-value=1.2e+02 Score=20.41 Aligned_cols=30 Identities=10% Similarity=0.032 Sum_probs=21.1
Q ss_pred cccEEEEccC--------hHHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAG--------LNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G--------~~~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+-+.. ....+....+++ |||++++-
T Consensus 110 ~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 110 HFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred CccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence 5888886532 123677777888 99999864
No 428
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=24.49 E-value=39 Score=22.08 Aligned_cols=32 Identities=6% Similarity=0.041 Sum_probs=22.9
Q ss_pred cccEEEEccC-------hHHHHHHHHHhccCCCEEEEec
Q 034260 4 GIDVSFDCAG-------LNKTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G-------~~~~~~~al~~l~~gGrvv~vG 35 (100)
.+|+|+-... ....++++.+.++|||++++.-
T Consensus 114 ~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 114 AFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp CEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CEEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEe
Confidence 4788775421 2346788889999999999753
No 429
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=24.43 E-value=1.2e+02 Score=18.92 Aligned_cols=35 Identities=20% Similarity=0.354 Sum_probs=21.2
Q ss_pred cccEEEEccChH-----------HHHHHHHHhccCC--CEEEEecCCC
Q 034260 4 GIDVSFDCAGLN-----------KTMSTVLDATRAG--DKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G~~-----------~~~~~al~~l~~g--Grvv~vG~~~ 38 (100)
++|+||.|+|.. ......+++++.. .+++.++...
T Consensus 67 ~~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~ 114 (227)
T 3dhn_A 67 GADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAG 114 (227)
T ss_dssp TCSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCST
T ss_pred CCCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChh
Confidence 589999998864 1233344444433 4888887643
No 430
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=24.39 E-value=74 Score=22.01 Aligned_cols=35 Identities=17% Similarity=0.263 Sum_probs=25.2
Q ss_pred CcccEEEEccChHH------------------HHHHHHHhccCCCEEEEecCC
Q 034260 3 AGIDVSFDCAGLNK------------------TMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 3 ~G~D~vie~~G~~~------------------~~~~al~~l~~gGrvv~vG~~ 37 (100)
+++|+|+-++|.+. .+-..+.-..|.+.+++++.|
T Consensus 68 ~~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNP 120 (294)
T 2x0j_A 68 KGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNP 120 (294)
T ss_dssp TTCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSS
T ss_pred CCCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCc
Confidence 36899999999653 234455555789998888765
No 431
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=24.38 E-value=54 Score=21.00 Aligned_cols=35 Identities=23% Similarity=0.276 Sum_probs=24.0
Q ss_pred CcccEEEEccCh--------H---H---------------HHHHHHHhccCCCEEEEecCC
Q 034260 3 AGIDVSFDCAGL--------N---K---------------TMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 3 ~G~D~vie~~G~--------~---~---------------~~~~al~~l~~gGrvv~vG~~ 37 (100)
+++|+++.++|. . + ..+.++..++++|+++.++..
T Consensus 71 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~ 131 (236)
T 1ooe_A 71 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAA 131 (236)
T ss_dssp CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECch
Confidence 368999999983 1 1 134455556668999999764
No 432
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=24.21 E-value=1.2e+02 Score=20.08 Aligned_cols=32 Identities=9% Similarity=0.076 Sum_probs=20.5
Q ss_pred cccEEEEccChHHHHHHHH-------HhccCCCEEEEec
Q 034260 4 GIDVSFDCAGLNKTMSTVL-------DATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al-------~~l~~gGrvv~vG 35 (100)
.+|+|+.|+..+..+++.+ +.++++..++-.+
T Consensus 57 ~advvi~~v~~~~~~~~v~~~~~~l~~~l~~g~~vv~~s 95 (287)
T 3pdu_A 57 ACDITIAMLADPAAAREVCFGANGVLEGIGGGRGYIDMS 95 (287)
T ss_dssp HCSEEEECCSSHHHHHHHHHSTTCGGGTCCTTCEEEECS
T ss_pred cCCEEEEEcCCHHHHHHHHcCchhhhhcccCCCEEEECC
Confidence 4799999999876666655 3345555444443
No 433
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=24.19 E-value=83 Score=21.48 Aligned_cols=30 Identities=20% Similarity=0.294 Sum_probs=24.2
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+.|+......+.+.++++.| +-|++
T Consensus 66 ~vD~V~i~tp~~~H~~~~~~al~~G-khVl~ 95 (334)
T 3ohs_X 66 NVEVAYVGTQHPQHKAAVMLCLAAG-KAVLC 95 (334)
T ss_dssp TCCEEEECCCGGGHHHHHHHHHHTT-CEEEE
T ss_pred CCCEEEECCCcHHHHHHHHHHHhcC-CEEEE
Confidence 5899999999988888888888765 55554
No 434
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=24.08 E-value=1.4e+02 Score=19.80 Aligned_cols=28 Identities=7% Similarity=0.060 Sum_probs=17.3
Q ss_pred cccEEEEccChH-----HHHHHHHHhccCCCEE
Q 034260 4 GIDVSFDCAGLN-----KTMSTVLDATRAGDKV 31 (100)
Q Consensus 4 G~D~vie~~G~~-----~~~~~al~~l~~gGrv 31 (100)
++|+||+|++.. ..+++..+.++++..+
T Consensus 85 ~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il 117 (283)
T 4e12_A 85 DADLVIEAVPESLDLKRDIYTKLGELAPAKTIF 117 (283)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEE
T ss_pred cCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEE
Confidence 589999999964 2234444455555433
No 435
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=24.03 E-value=1.3e+02 Score=20.60 Aligned_cols=33 Identities=24% Similarity=0.304 Sum_probs=20.7
Q ss_pred cccEEEEccChHH---------------HHHHHHHhc---cCCCEEEEecC
Q 034260 4 GIDVSFDCAGLNK---------------TMSTVLDAT---RAGDKVCLVGM 36 (100)
Q Consensus 4 G~D~vie~~G~~~---------------~~~~al~~l---~~gGrvv~vG~ 36 (100)
++|+|+.|++.+. .+.+..+.+ .|.+.++++..
T Consensus 67 ~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tN 117 (319)
T 1a5z_A 67 GSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTN 117 (319)
T ss_dssp TCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred CCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence 6899999999521 123333333 58888877643
No 436
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=24.02 E-value=70 Score=21.73 Aligned_cols=30 Identities=13% Similarity=0.024 Sum_probs=23.0
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+.|++.....+.+.++++. |+-|++
T Consensus 63 ~~D~V~i~tp~~~h~~~~~~al~~-Gk~V~~ 92 (323)
T 1xea_A 63 GVDAVMIHAATDVHSTLAAFFLHL-GIPTFV 92 (323)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHT-TCCEEE
T ss_pred CCCEEEEECCchhHHHHHHHHHHC-CCeEEE
Confidence 589999999988777777777775 454544
No 437
>1th8_B Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: c.13.2.1 PDB: 1thn_B* 1tid_B* 1til_B* 1auz_A 1buz_A
Probab=23.94 E-value=39 Score=18.98 Aligned_cols=33 Identities=6% Similarity=0.189 Sum_probs=18.9
Q ss_pred cEEEEccChH-------HHHHHHHHhc-cCCCEEEEecCCC
Q 034260 6 DVSFDCAGLN-------KTMSTVLDAT-RAGDKVCLVGMGH 38 (100)
Q Consensus 6 D~vie~~G~~-------~~~~~al~~l-~~gGrvv~vG~~~ 38 (100)
.+++|+++.. ..+....+.+ +.|+++.++|...
T Consensus 45 ~vvlDls~v~~iDssgl~~L~~~~~~~~~~g~~l~l~~~~~ 85 (116)
T 1th8_B 45 HIVLNLGQLTFMDSSGLGVILGRYKQIKNVGGQMVVCAVSP 85 (116)
T ss_dssp EEEEEEEEEEEECHHHHHHHHHHHHHHHHTTCCEEEESCCH
T ss_pred EEEEECCCCcEEccHHHHHHHHHHHHHHHhCCeEEEEeCCH
Confidence 3556665533 2344444444 4678888888754
No 438
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=23.92 E-value=96 Score=20.96 Aligned_cols=31 Identities=6% Similarity=0.037 Sum_probs=21.3
Q ss_pred cccEEEEcc----ChH--------HHHHHHHHhccCCC--EEEEe
Q 034260 4 GIDVSFDCA----GLN--------KTMSTVLDATRAGD--KVCLV 34 (100)
Q Consensus 4 G~D~vie~~----G~~--------~~~~~al~~l~~gG--rvv~v 34 (100)
.+|+|+-.. +.+ ..++.+.+.|+||| ++++-
T Consensus 148 ~fD~Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~ 192 (276)
T 2wa2_A 148 QADTVLCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVK 192 (276)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred CcCEEEECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEE
Confidence 578877532 221 24677788999999 88863
No 439
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=23.83 E-value=81 Score=22.70 Aligned_cols=30 Identities=20% Similarity=0.173 Sum_probs=23.7
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+.|+......+.+.++++.| +-|++
T Consensus 150 ~vD~V~iatp~~~h~~~~~~al~aG-k~Vl~ 179 (433)
T 1h6d_A 150 KIDAVYIILPNSLHAEFAIRAFKAG-KHVMC 179 (433)
T ss_dssp TCCEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred CCCEEEEcCCchhHHHHHHHHHHCC-CcEEE
Confidence 5899999999987888888888765 55555
No 440
>3oiz_A Antisigma-factor antagonist, STAS; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, STAS domain; 1.65A {Rhodobacter sphaeroides} PDB: 3lkl_A
Probab=23.75 E-value=32 Score=19.41 Aligned_cols=33 Identities=24% Similarity=0.398 Sum_probs=18.9
Q ss_pred cEEEEccChH-------HHHHHHHHhc-cCCCEEEEecCCC
Q 034260 6 DVSFDCAGLN-------KTMSTVLDAT-RAGDKVCLVGMGH 38 (100)
Q Consensus 6 D~vie~~G~~-------~~~~~al~~l-~~gGrvv~vG~~~ 38 (100)
.+++|+++.+ .++....+.+ +.|+++.+.|..+
T Consensus 46 ~vvlDls~v~~iDssgl~~L~~~~~~~~~~g~~l~l~~~~~ 86 (99)
T 3oiz_A 46 RVVIDVSRAHIWDISSVQALDMAVLKFRREGAEVRIVGMNE 86 (99)
T ss_dssp EEEEEEEEEEECSHHHHHHHHHHHHHHHHTTCEEEEESHHH
T ss_pred EEEEECCCCCccCHHHHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 3556655433 2444444444 5788888887553
No 441
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2
Probab=23.64 E-value=73 Score=19.25 Aligned_cols=26 Identities=8% Similarity=0.303 Sum_probs=16.5
Q ss_pred ccEEEEccC--hHHHHHHHHHhccCCCE
Q 034260 5 IDVSFDCAG--LNKTMSTVLDATRAGDK 30 (100)
Q Consensus 5 ~D~vie~~G--~~~~~~~al~~l~~gGr 30 (100)
.|++||+++ ...+.++.++.++.||.
T Consensus 142 ~~~~Idt~~~~~eev~~~I~~~l~~~~~ 169 (175)
T 1via_A 142 ANFILNIENKNIDELLSEIKKVIKEGGS 169 (175)
T ss_dssp CSEEEECTTCCHHHHHHHHHHHHC----
T ss_pred CCEEEECCCCCHHHHHHHHHHHHHhcCc
Confidence 588999884 44567777788888774
No 442
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=23.45 E-value=92 Score=20.33 Aligned_cols=21 Identities=5% Similarity=-0.042 Sum_probs=14.7
Q ss_pred cccEEEEccChHHHHHHHHHhc
Q 034260 4 GIDVSFDCAGLNKTMSTVLDAT 25 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l 25 (100)
.+|+|+.|+.... ..+.++.+
T Consensus 68 ~~Dvvi~av~~~~-~~~v~~~l 88 (266)
T 3d1l_A 68 YAKLYIVSLKDSA-FAELLQGI 88 (266)
T ss_dssp CCSEEEECCCHHH-HHHHHHHH
T ss_pred CCCEEEEecCHHH-HHHHHHHH
Confidence 5899999999864 35444433
No 443
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=23.40 E-value=1.2e+02 Score=20.96 Aligned_cols=33 Identities=18% Similarity=0.149 Sum_probs=21.0
Q ss_pred cccEEEEccChHH------------------HHHHHHHhccCCCEEEEecC
Q 034260 4 GIDVSFDCAGLNK------------------TMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 4 G~D~vie~~G~~~------------------~~~~al~~l~~gGrvv~vG~ 36 (100)
++|+|+-|+|.+. .+-..+.-.+|++.++++..
T Consensus 74 ~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tN 124 (318)
T 1y6j_A 74 DCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSN 124 (318)
T ss_dssp TCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSS
T ss_pred CCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 6899999999763 12222333368999888644
No 444
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=23.34 E-value=1.1e+02 Score=21.28 Aligned_cols=38 Identities=16% Similarity=0.058 Sum_probs=27.7
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccCh
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPL 45 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~ 45 (100)
.+|+|+.|+......+.+.++++.| +-|++ .+|+..+.
T Consensus 68 ~vD~V~i~tp~~~H~~~~~~al~aG-khVl~---EKPla~~~ 105 (359)
T 3m2t_A 68 PLDAVVMAGPPQLHFEMGLLAMSKG-VNVFV---EKPPCATL 105 (359)
T ss_dssp CCSEEEECSCHHHHHHHHHHHHHTT-CEEEE---CSCSCSSH
T ss_pred CCCEEEEcCCcHHHHHHHHHHHHCC-CeEEE---ECCCcCCH
Confidence 4799999999988888888888765 55655 34444444
No 445
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=23.27 E-value=73 Score=22.33 Aligned_cols=34 Identities=12% Similarity=-0.065 Sum_probs=24.3
Q ss_pred CcccEEEEcc-C---------hHHHHHHHHHhccCCCEEEEecC
Q 034260 3 AGIDVSFDCA-G---------LNKTMSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 3 ~G~D~vie~~-G---------~~~~~~~al~~l~~gGrvv~vG~ 36 (100)
+.+|+|+--. . ..+.++.+.+.|+++|.+++--.
T Consensus 158 ~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 158 ASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 3578876521 1 13568899999999999987654
No 446
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=23.20 E-value=79 Score=20.66 Aligned_cols=35 Identities=11% Similarity=0.243 Sum_probs=22.9
Q ss_pred cccEEEEccChH-------HHHHHHHHhccCC--CEEEEecCCC
Q 034260 4 GIDVSFDCAGLN-------KTMSTVLDATRAG--DKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G~~-------~~~~~al~~l~~g--Grvv~vG~~~ 38 (100)
++|+||-|+|.. ......+++++.. ++++.++...
T Consensus 65 ~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~ 108 (289)
T 3e48_A 65 GMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA 108 (289)
T ss_dssp TCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred CCCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence 689999998852 2234455555443 4888887654
No 447
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=23.13 E-value=1.2e+02 Score=19.98 Aligned_cols=20 Identities=20% Similarity=0.026 Sum_probs=15.6
Q ss_pred cccEEEEccChHHHHHHHHH
Q 034260 4 GIDVSFDCAGLNKTMSTVLD 23 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~ 23 (100)
.+|+|+.|++.+..+++.+.
T Consensus 58 ~~D~vi~~vp~~~~~~~v~~ 77 (295)
T 1yb4_A 58 FADIIFIMVPDTPQVEDVLF 77 (295)
T ss_dssp TCSEEEECCSSHHHHHHHHH
T ss_pred cCCEEEEECCCHHHHHHHHh
Confidence 47999999988766666665
No 448
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=23.07 E-value=1.2e+02 Score=20.41 Aligned_cols=12 Identities=25% Similarity=0.208 Sum_probs=10.0
Q ss_pred cccEEEEccChH
Q 034260 4 GIDVSFDCAGLN 15 (100)
Q Consensus 4 G~D~vie~~G~~ 15 (100)
++|+|+.|++.+
T Consensus 75 ~aD~Vii~v~~~ 86 (319)
T 1lld_A 75 DADMVVITAGPR 86 (319)
T ss_dssp TCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 589999999754
No 449
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=23.02 E-value=2.2e+02 Score=21.02 Aligned_cols=12 Identities=8% Similarity=0.213 Sum_probs=10.3
Q ss_pred CcccEEEEccCh
Q 034260 3 AGIDVSFDCAGL 14 (100)
Q Consensus 3 ~G~D~vie~~G~ 14 (100)
.++|+|+.++|+
T Consensus 101 ~~AD~VViaag~ 112 (472)
T 1u8x_X 101 TDVDFVMAHIRV 112 (472)
T ss_dssp SSCSEEEECCCT
T ss_pred cCCCEEEEcCCC
Confidence 368999999987
No 450
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=22.93 E-value=88 Score=21.90 Aligned_cols=34 Identities=18% Similarity=0.190 Sum_probs=23.7
Q ss_pred cccEEEEccChHH------------------HHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCAGLNK------------------TMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~G~~~------------------~~~~al~~l~~gGrvv~vG~~ 37 (100)
++|+|+-|+|.+. .+-..+.-..|.+.+++++.|
T Consensus 73 ~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNP 124 (326)
T 3pqe_A 73 DADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNP 124 (326)
T ss_dssp TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSS
T ss_pred CCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCCh
Confidence 6899999998641 122344445789999888755
No 451
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=22.84 E-value=83 Score=21.66 Aligned_cols=33 Identities=18% Similarity=0.195 Sum_probs=21.5
Q ss_pred cccEEEEccChHH---------------H---HHHHHHhccCCCEEEEecC
Q 034260 4 GIDVSFDCAGLNK---------------T---MSTVLDATRAGDKVCLVGM 36 (100)
Q Consensus 4 G~D~vie~~G~~~---------------~---~~~al~~l~~gGrvv~vG~ 36 (100)
++|+|+.|+|.+. . +-..++-..|.+.+++++.
T Consensus 74 ~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tN 124 (316)
T 1ldn_A 74 DADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATN 124 (316)
T ss_dssp TCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred CCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 6899999987542 2 2233333468898887654
No 452
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=22.83 E-value=1.3e+02 Score=19.84 Aligned_cols=32 Identities=22% Similarity=0.293 Sum_probs=20.6
Q ss_pred cccEEEEccChHHHHHHHH-------HhccCCCEEEEec
Q 034260 4 GIDVSFDCAGLNKTMSTVL-------DATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al-------~~l~~gGrvv~vG 35 (100)
.+|+|+.|++.+..+++.+ ..++++..++.++
T Consensus 60 ~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~~ 98 (301)
T 3cky_A 60 ASDIIFTSLPNAGIVETVMNGPGGVLSACKAGTVIVDMS 98 (301)
T ss_dssp HCSEEEECCSSHHHHHHHHHSTTCHHHHSCTTCEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHcCcchHhhcCCCCCEEEECC
Confidence 4799999998766555555 3455655555443
No 453
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=22.75 E-value=1.5e+02 Score=19.98 Aligned_cols=32 Identities=6% Similarity=-0.039 Sum_probs=20.5
Q ss_pred cccEEEEccChHHHHHHHH-------HhccCCCEEEEec
Q 034260 4 GIDVSFDCAGLNKTMSTVL-------DATRAGDKVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al-------~~l~~gGrvv~vG 35 (100)
.+|+||.|++.+..+++.+ ..++++..++-.+
T Consensus 77 ~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~s 115 (310)
T 3doj_A 77 KCKYTIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMS 115 (310)
T ss_dssp HCSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECS
T ss_pred hCCEEEEEcCCHHHHHHHHhCchhhhhccCCCCEEEECC
Confidence 4799999998776666655 3345555554444
No 454
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=22.54 E-value=93 Score=21.38 Aligned_cols=38 Identities=11% Similarity=0.091 Sum_probs=27.7
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccCh
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPL 45 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~ 45 (100)
.+|+|+.|++.....+.+.++++.| +-|++ .+|...+.
T Consensus 82 ~vD~V~i~tp~~~H~~~~~~al~aG-khVl~---EKPla~~~ 119 (340)
T 1zh8_A 82 LVDAVDLTLPVELNLPFIEKALRKG-VHVIC---EKPISTDV 119 (340)
T ss_dssp CCSEEEECCCGGGHHHHHHHHHHTT-CEEEE---ESSSSSSH
T ss_pred CCCEEEEeCCchHHHHHHHHHHHCC-CcEEE---eCCCCCCH
Confidence 5899999999887788888888765 56665 34444444
No 455
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=22.41 E-value=89 Score=21.72 Aligned_cols=35 Identities=17% Similarity=0.238 Sum_probs=24.1
Q ss_pred CcccEEEEccChHH------------------HHHHHHHhccCCCEEEEecCC
Q 034260 3 AGIDVSFDCAGLNK------------------TMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 3 ~G~D~vie~~G~~~------------------~~~~al~~l~~gGrvv~vG~~ 37 (100)
+++|+|+-++|.+. .+-..+.-..|.+.+++++.|
T Consensus 68 ~~aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNP 120 (312)
T 3hhp_A 68 EGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNP 120 (312)
T ss_dssp TTCSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSC
T ss_pred CCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCc
Confidence 36899999998652 223344445789999888754
No 456
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=22.41 E-value=28 Score=24.61 Aligned_cols=37 Identities=14% Similarity=0.056 Sum_probs=27.7
Q ss_pred cccEEEEccChHH-----------------HHHHHHHhccCCCEEEEecCCCCC
Q 034260 4 GIDVSFDCAGLNK-----------------TMSTVLDATRAGDKVCLVGMGHHD 40 (100)
Q Consensus 4 G~D~vie~~G~~~-----------------~~~~al~~l~~gGrvv~vG~~~~~ 40 (100)
.+|+||--++.+- .-..|+..++|||++++.|....+
T Consensus 211 rYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyAD 264 (324)
T 3trk_A 211 RYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYAD 264 (324)
T ss_dssp CEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCS
T ss_pred ceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecccc
Confidence 4688887777541 345678889999999999987654
No 457
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=22.25 E-value=51 Score=22.88 Aligned_cols=16 Identities=13% Similarity=0.310 Sum_probs=13.1
Q ss_pred CcccEEEEccChHHHH
Q 034260 3 AGIDVSFDCAGLNKTM 18 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~ 18 (100)
.++|+|+||+.+.++-
T Consensus 136 ~~~DlVid~~Dn~~~R 151 (292)
T 3h8v_A 136 KPVDLVLSCVDNFEAR 151 (292)
T ss_dssp BCCSEEEECCSSHHHH
T ss_pred CCCCEEEECCcchhhh
Confidence 4789999999987653
No 458
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=22.22 E-value=92 Score=19.72 Aligned_cols=35 Identities=20% Similarity=0.255 Sum_probs=22.2
Q ss_pred CcccEEEEccChHH------------------HHHHHHHhccC--CCEEEEecCC
Q 034260 3 AGIDVSFDCAGLNK------------------TMSTVLDATRA--GDKVCLVGMG 37 (100)
Q Consensus 3 ~G~D~vie~~G~~~------------------~~~~al~~l~~--gGrvv~vG~~ 37 (100)
+++|++|-++|... .++.++..++. .++++.++..
T Consensus 61 ~~~d~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~ 115 (255)
T 2dkn_A 61 GVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSI 115 (255)
T ss_dssp TCCSEEEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred CCccEEEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecc
Confidence 36899999988532 22344444433 3899998764
No 459
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=22.10 E-value=36 Score=22.03 Aligned_cols=32 Identities=6% Similarity=0.021 Sum_probs=23.1
Q ss_pred CcccEEEE-ccCh-HHHHHHHHHhccCCCEEEEe
Q 034260 3 AGIDVSFD-CAGL-NKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 3 ~G~D~vie-~~G~-~~~~~~al~~l~~gGrvv~v 34 (100)
..+|+|+- +... ...++.+.+.+++||++++.
T Consensus 140 ~~fD~V~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 140 ESYDIVTARAVARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp TCEEEEEEECCSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCccEEEEeccCCHHHHHHHHHHhcCCCCEEEEE
Confidence 35788774 3332 34677788999999999986
No 460
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=22.10 E-value=74 Score=22.39 Aligned_cols=35 Identities=11% Similarity=-0.003 Sum_probs=25.0
Q ss_pred cccEEEEccChHH------------------HHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCAGLNK------------------TMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G~~~------------------~~~~al~~l~~gGrvv~vG~~~ 38 (100)
++|+|+-|+|.+. .+-..+.-..|.+.+++++.+-
T Consensus 87 ~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNPv 139 (331)
T 4aj2_A 87 NSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNPV 139 (331)
T ss_dssp TEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred CCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChH
Confidence 6899999998652 2334455558999999988653
No 461
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=21.93 E-value=1.2e+02 Score=21.32 Aligned_cols=34 Identities=9% Similarity=0.038 Sum_probs=23.5
Q ss_pred cccEEEEccChHH------------------HHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCAGLNK------------------TMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~G~~~------------------~~~~al~~l~~gGrvv~vG~~ 37 (100)
++|+|+-|+|.+. .+-..+.-..|.+.+++++.|
T Consensus 76 ~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNP 127 (326)
T 3vku_A 76 DADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANP 127 (326)
T ss_dssp TCSEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECSSS
T ss_pred CCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCc
Confidence 6899999988652 233444445789998888754
No 462
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=21.88 E-value=43 Score=21.52 Aligned_cols=30 Identities=23% Similarity=0.201 Sum_probs=21.2
Q ss_pred cccEEEEccC---------hHHHHHHHHHhccCCCEEEE
Q 034260 4 GIDVSFDCAG---------LNKTMSTVLDATRAGDKVCL 33 (100)
Q Consensus 4 G~D~vie~~G---------~~~~~~~al~~l~~gGrvv~ 33 (100)
.+|+|+-.-+ ....++.+.+.++|||++++
T Consensus 105 ~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~ 143 (252)
T 1wzn_A 105 EFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT 143 (252)
T ss_dssp CEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 5788874311 12467788899999999985
No 463
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=21.81 E-value=1.7e+02 Score=18.84 Aligned_cols=34 Identities=12% Similarity=0.070 Sum_probs=21.2
Q ss_pred cccEEEEc-----cChHHHHHHHHHhccC-CCEEEEecCC
Q 034260 4 GIDVSFDC-----AGLNKTMSTVLDATRA-GDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~-----~G~~~~~~~al~~l~~-gGrvv~vG~~ 37 (100)
.+|+|+-. ...+..+.+.++.+.+ ||++++.-..
T Consensus 122 ~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~ 161 (275)
T 3bkx_A 122 HFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWS 161 (275)
T ss_dssp CCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEEC
T ss_pred CEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence 57888743 2334445566655555 9999987544
No 464
>1sbo_A Putative anti-sigma factor antagonist TM1442; open sandwich, JCSG, structural genomics, joint center for structural genomics, PSI; NMR {Thermotoga maritima} SCOP: c.13.2.1 PDB: 1t6r_A* 1vc1_A
Probab=21.77 E-value=45 Score=18.46 Aligned_cols=33 Identities=15% Similarity=0.337 Sum_probs=17.9
Q ss_pred cEEEEccChH-------HHHHHHHHhc-cCCCEEEEecCCC
Q 034260 6 DVSFDCAGLN-------KTMSTVLDAT-RAGDKVCLVGMGH 38 (100)
Q Consensus 6 D~vie~~G~~-------~~~~~al~~l-~~gGrvv~vG~~~ 38 (100)
.+++|+++.. ..+....+.+ +.|+++.+.|...
T Consensus 46 ~vvlDls~v~~iDssgl~~L~~~~~~~~~~g~~l~l~~~~~ 86 (110)
T 1sbo_A 46 KIVLDLSSVSYMDSAGLGTLVVILKDAKINGKEFILSSLKE 86 (110)
T ss_dssp EEEEECTTCCCBCHHHHHHHHHHHHHHHHTTCEEEEESCCH
T ss_pred EEEEECCCCcEEccHHHHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 3667776643 1233334333 3567777777553
No 465
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=21.76 E-value=1.3e+02 Score=18.89 Aligned_cols=34 Identities=12% Similarity=0.069 Sum_probs=20.6
Q ss_pred CcccEEEEccChHH------HHHHHHHhccCCCEEEEecCC
Q 034260 3 AGIDVSFDCAGLNK------TMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 3 ~G~D~vie~~G~~~------~~~~al~~l~~gGrvv~vG~~ 37 (100)
..+|+|+--..... .++.+ +.++|||.+++--..
T Consensus 133 ~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 133 DTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp CCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred CceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 35888775433221 12223 789999999875544
No 466
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=21.53 E-value=1.1e+02 Score=20.79 Aligned_cols=39 Identities=15% Similarity=0.072 Sum_probs=28.7
Q ss_pred CcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccCh
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPL 45 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~ 45 (100)
..+|+|+.|+......+.+.++++.| +-|++ .+|+..+.
T Consensus 71 ~~vD~V~I~tP~~~H~~~~~~al~aG-khVl~---EKPla~~~ 109 (312)
T 3o9z_A 71 EGVDYLSIASPNHLHYPQIRMALRLG-ANALS---EKPLVLWP 109 (312)
T ss_dssp CCCSEEEECSCGGGHHHHHHHHHHTT-CEEEE---CSSSCSCH
T ss_pred CCCcEEEECCCchhhHHHHHHHHHCC-CeEEE---ECCCCCCH
Confidence 36899999999988888888888875 55554 34444444
No 467
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=21.53 E-value=98 Score=21.69 Aligned_cols=30 Identities=17% Similarity=0.208 Sum_probs=24.0
Q ss_pred cccEEEEccChHHHHHHHHHhccCCCEEEEe
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gGrvv~v 34 (100)
.+|+|+.|+......+.+.++++.| +-|++
T Consensus 64 ~vD~V~i~tp~~~H~~~~~~al~aG-k~Vl~ 93 (387)
T 3moi_A 64 QMDAVYIASPHQFHCEHVVQASEQG-LHIIV 93 (387)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred CCCEEEEcCCcHHHHHHHHHHHHCC-Cceee
Confidence 4899999999988888888888765 55554
No 468
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=21.50 E-value=46 Score=23.18 Aligned_cols=20 Identities=25% Similarity=0.263 Sum_probs=17.5
Q ss_pred HHHHHHHHhccCCCEEEEec
Q 034260 16 KTMSTVLDATRAGDKVCLVG 35 (100)
Q Consensus 16 ~~~~~al~~l~~gGrvv~vG 35 (100)
..++.+.++++|||+++++-
T Consensus 287 ~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 287 EFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEEE
Confidence 56888999999999999874
No 469
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=21.49 E-value=50 Score=21.88 Aligned_cols=34 Identities=24% Similarity=0.426 Sum_probs=24.5
Q ss_pred cccEEEEccChH----------H---------------HHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCAGLN----------K---------------TMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~G~~----------~---------------~~~~al~~l~~gGrvv~vG~~ 37 (100)
++|+++.++|.. + ..+.++..++++|+++.++..
T Consensus 105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~ 163 (267)
T 3u5t_A 105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTS 163 (267)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCT
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeCh
Confidence 589999998842 1 244566667788999999864
No 470
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=21.48 E-value=1.2e+02 Score=18.98 Aligned_cols=35 Identities=23% Similarity=0.176 Sum_probs=22.1
Q ss_pred cccEEEEccChHH-HHHHHHHhccC--CCEEEEecCCC
Q 034260 4 GIDVSFDCAGLNK-TMSTVLDATRA--GDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G~~~-~~~~al~~l~~--gGrvv~vG~~~ 38 (100)
++|++|.++|... ..+..++.++. .|+++.++...
T Consensus 73 ~~d~vv~~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~ 110 (221)
T 3r6d_A 73 NAEVVFVGAMESGSDMASIVKALSRXNIRRVIGVSMAG 110 (221)
T ss_dssp TCSEEEESCCCCHHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred CCCEEEEcCCCCChhHHHHHHHHHhcCCCeEEEEeece
Confidence 6899999998621 13444444433 36898887543
No 471
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=21.42 E-value=1e+02 Score=19.20 Aligned_cols=35 Identities=14% Similarity=0.248 Sum_probs=21.5
Q ss_pred cccEEEEccChHH---------HHHHHHHhccC--CCEEEEecCCC
Q 034260 4 GIDVSFDCAGLNK---------TMSTVLDATRA--GDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G~~~---------~~~~al~~l~~--gGrvv~vG~~~ 38 (100)
++|+||.|+|... .....+++++. .++++.++...
T Consensus 63 ~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~ 108 (219)
T 3dqp_A 63 GMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIF 108 (219)
T ss_dssp TCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECccc
Confidence 6899999998542 12233333333 25898887654
No 472
>4dgf_A Sulfate transporter sulfate transporter family PR; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.60A {Wolinella succinogenes} PDB: 3oir_A*
Probab=21.40 E-value=36 Score=20.21 Aligned_cols=33 Identities=9% Similarity=0.172 Sum_probs=20.8
Q ss_pred cEEEEccChH-------HHHHHHHHhc-cCCCEEEEecCCC
Q 034260 6 DVSFDCAGLN-------KTMSTVLDAT-RAGDKVCLVGMGH 38 (100)
Q Consensus 6 D~vie~~G~~-------~~~~~al~~l-~~gGrvv~vG~~~ 38 (100)
.+++|+++.+ .++....+.+ +.|++++++|...
T Consensus 54 ~vvlDls~v~~iDssgl~~L~~~~~~~~~~g~~l~l~~~~~ 94 (135)
T 4dgf_A 54 VFILRMRRVPVIDATGMHALWEFQESCEKRGTILLLSGVSD 94 (135)
T ss_dssp EEEEECTTCSCBCHHHHHHHHHHHHHHHHHTCEEEEESCCH
T ss_pred EEEEEcCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4677777654 2344444333 5788999988764
No 473
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=21.32 E-value=86 Score=22.56 Aligned_cols=32 Identities=16% Similarity=0.116 Sum_probs=25.1
Q ss_pred cccEEEEccChHHHHHHHHHhccCCC-----EEEEec
Q 034260 4 GIDVSFDCAGLNKTMSTVLDATRAGD-----KVCLVG 35 (100)
Q Consensus 4 G~D~vie~~G~~~~~~~al~~l~~gG-----rvv~vG 35 (100)
.+|+|+.|+......+.+.++++.|. +-|++-
T Consensus 89 ~vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~E 125 (438)
T 3btv_A 89 TIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVE 125 (438)
T ss_dssp SCSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEE
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEec
Confidence 58999999999888888888887752 556553
No 474
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=21.27 E-value=48 Score=22.40 Aligned_cols=35 Identities=11% Similarity=0.094 Sum_probs=25.1
Q ss_pred cccEEEEcc-----Ch---HHHHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCA-----GL---NKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~-----G~---~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
++|+|+-.- .. ...++.+.++++|||+++++-...
T Consensus 232 ~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 274 (335)
T 2r3s_A 232 DYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIP 274 (335)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred CCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecC
Confidence 478877521 11 256788889999999999986554
No 475
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=21.26 E-value=36 Score=23.59 Aligned_cols=35 Identities=11% Similarity=0.229 Sum_probs=25.2
Q ss_pred cccEEEEcc----C-------hHHHHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCA----G-------LNKTMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~----G-------~~~~~~~al~~l~~gGrvv~vG~~~ 38 (100)
.+|+|+-.- | ....++++.+.++|||+++++....
T Consensus 261 ~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 306 (343)
T 2pjd_A 261 RFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAF 306 (343)
T ss_dssp CEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETT
T ss_pred CeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCC
Confidence 578877631 2 1346788889999999999987544
No 476
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=21.19 E-value=1.2e+02 Score=19.60 Aligned_cols=34 Identities=18% Similarity=0.288 Sum_probs=20.7
Q ss_pred cccEEEEccCh-------HHHHHHHHHhccCC--CEEEEecCC
Q 034260 4 GIDVSFDCAGL-------NKTMSTVLDATRAG--DKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~G~-------~~~~~~al~~l~~g--Grvv~vG~~ 37 (100)
++|+||.++|. .......+++++.. ++++.++..
T Consensus 66 ~~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~ 108 (287)
T 2jl1_A 66 GVSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYA 108 (287)
T ss_dssp TCSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEET
T ss_pred cCCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence 58999999884 12233444444433 488888754
No 477
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=20.92 E-value=65 Score=22.83 Aligned_cols=20 Identities=25% Similarity=0.365 Sum_probs=17.7
Q ss_pred HHHHHHHHHhccCCCEEEEe
Q 034260 15 NKTMSTVLDATRAGDKVCLV 34 (100)
Q Consensus 15 ~~~~~~al~~l~~gGrvv~v 34 (100)
.+++++|++.++.||++++.
T Consensus 26 T~aiq~Ai~ac~~Gg~v~~~ 45 (376)
T 1bhe_A 26 TSTIQKALNNCDQGKAVRLS 45 (376)
T ss_dssp HHHHHHHHTTCCTTCEEEEE
T ss_pred HHHHHHHHHHhccCCcEEEE
Confidence 46799999999999999887
No 478
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=20.87 E-value=1.6e+02 Score=18.19 Aligned_cols=33 Identities=9% Similarity=0.145 Sum_probs=22.2
Q ss_pred cccEEEEccChH----------HHHHHHHHhcc-CCCEEEEecC
Q 034260 4 GIDVSFDCAGLN----------KTMSTVLDATR-AGDKVCLVGM 36 (100)
Q Consensus 4 G~D~vie~~G~~----------~~~~~al~~l~-~gGrvv~vG~ 36 (100)
++|+||.|+|.. ......+++++ .+++++.++.
T Consensus 62 ~~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS 105 (224)
T 3h2s_A 62 SVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILG 105 (224)
T ss_dssp TCSEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred cCCEEEECCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence 689999999862 23345555554 3478988853
No 479
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=20.82 E-value=1e+02 Score=21.75 Aligned_cols=35 Identities=9% Similarity=0.061 Sum_probs=21.2
Q ss_pred CcccEEEEccChHH------------------HHHHHHHhccCCCE-EEEecCC
Q 034260 3 AGIDVSFDCAGLNK------------------TMSTVLDATRAGDK-VCLVGMG 37 (100)
Q Consensus 3 ~G~D~vie~~G~~~------------------~~~~al~~l~~gGr-vv~vG~~ 37 (100)
+++|+|+-|+|.+. .+-..+.-..|.+. +++++.+
T Consensus 75 ~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNP 128 (343)
T 3fi9_A 75 TDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNP 128 (343)
T ss_dssp TTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSS
T ss_pred CCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCc
Confidence 36899999998752 12233444468995 7777644
No 480
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=20.80 E-value=96 Score=21.31 Aligned_cols=34 Identities=18% Similarity=0.274 Sum_probs=24.0
Q ss_pred cccEEEEccChHH------------------HHHHHHHhccCCCEEEEecCC
Q 034260 4 GIDVSFDCAGLNK------------------TMSTVLDATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~G~~~------------------~~~~al~~l~~gGrvv~vG~~ 37 (100)
++|+|+-|+|.+. .+-..+.-..|.+.+++++.|
T Consensus 69 ~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNP 120 (294)
T 1oju_A 69 GSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNP 120 (294)
T ss_dssp TCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSS
T ss_pred CCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCc
Confidence 6899999998652 122344455799999998854
No 481
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=20.63 E-value=60 Score=20.60 Aligned_cols=35 Identities=14% Similarity=0.042 Sum_probs=23.9
Q ss_pred cccEEEEccChH-----------H---------------HHHHHHHhccCCCEEEEecCCC
Q 034260 4 GIDVSFDCAGLN-----------K---------------TMSTVLDATRAGDKVCLVGMGH 38 (100)
Q Consensus 4 G~D~vie~~G~~-----------~---------------~~~~al~~l~~gGrvv~vG~~~ 38 (100)
++|+++.++|.. + ..+.++..++++|+++.++...
T Consensus 59 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~ 119 (223)
T 3uce_A 59 AFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGML 119 (223)
T ss_dssp SEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGG
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchh
Confidence 578899888843 0 2344555667789999998643
No 482
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=20.54 E-value=39 Score=21.38 Aligned_cols=30 Identities=20% Similarity=0.317 Sum_probs=21.2
Q ss_pred cccEEEEcc---C-------hHHHHHHHHHhccCCCEEEE
Q 034260 4 GIDVSFDCA---G-------LNKTMSTVLDATRAGDKVCL 33 (100)
Q Consensus 4 G~D~vie~~---G-------~~~~~~~al~~l~~gGrvv~ 33 (100)
.+|+|+-.. . ....++.+.+.++|||++++
T Consensus 101 ~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 140 (246)
T 1y8c_A 101 KFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF 140 (246)
T ss_dssp CEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred CceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 478887543 1 12456777888999999986
No 483
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=20.48 E-value=1.4e+02 Score=17.97 Aligned_cols=53 Identities=23% Similarity=0.068 Sum_probs=28.1
Q ss_pred CcccEEEEccChHHHHHHHHHhccCCCEEEEecCCCCCcccChHH-HHhcCcEEEe
Q 034260 3 AGIDVSFDCAGLNKTMSTVLDATRAGDKVCLVGMGHHDMTVPLTP-AAARYLIYGF 57 (100)
Q Consensus 3 ~G~D~vie~~G~~~~~~~al~~l~~gGrvv~vG~~~~~~~i~~~~-l~~k~~~i~G 57 (100)
..+|+++-|+......+..-++++.|-+.+++-.... .-.+.. +-..++++.|
T Consensus 76 ~~vDlvvi~vp~~~~~~vv~~~~~~gi~~i~~~~g~~--~~~l~~~a~~~Gi~vvG 129 (144)
T 2d59_A 76 DKIEVVDLFVKPKLTMEYVEQAIKKGAKVVWFQYNTY--NREASKKADEAGLIIVA 129 (144)
T ss_dssp SCCSEEEECSCHHHHHHHHHHHHHHTCSEEEECTTCC--CHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEECCCch--HHHHHHHHHHcCCEEEc
Confidence 4689999999986544433344444444444432211 111222 3345788884
No 484
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=20.33 E-value=1e+02 Score=19.23 Aligned_cols=34 Identities=12% Similarity=-0.005 Sum_probs=20.4
Q ss_pred cccEEEEccC----hH-HHHHHHHH--hccCCCEEEEecCC
Q 034260 4 GIDVSFDCAG----LN-KTMSTVLD--ATRAGDKVCLVGMG 37 (100)
Q Consensus 4 G~D~vie~~G----~~-~~~~~al~--~l~~gGrvv~vG~~ 37 (100)
.+|+|+-... .. ..++...+ .++|||++++.-..
T Consensus 122 ~fD~V~~~~p~~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 122 PHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp CEEEEEECCSSSTTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CCCEEEECCCCCCCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 4788775332 22 34444444 38999999876544
Done!