Query 034261
Match_columns 100
No_of_seqs 113 out of 987
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 19:50:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034261.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034261hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1eqk_A Oryzacystatin-I; alpha 100.0 1.1E-35 3.9E-40 186.7 14.7 95 2-97 7-101 (102)
2 3ima_B Cysteine proteinase inh 100.0 2E-34 6.7E-39 178.0 12.4 91 2-92 1-91 (91)
3 3ul5_A Canecystatin-1; defense 100.0 2.1E-33 7.2E-38 184.9 12.7 95 1-95 43-139 (139)
4 2l4v_A Cystatin; protease inhi 100.0 1.7E-32 5.9E-37 180.1 14.1 94 2-95 41-135 (135)
5 2w9q_A Multicystatin; protease 100.0 1E-30 3.5E-35 159.8 13.4 86 6-92 1-87 (87)
6 1yvb_I Cystatin; cysteine prot 100.0 1.5E-29 5.1E-34 160.2 11.5 88 3-92 2-111 (111)
7 2kxg_A Aspartic protease inhib 100.0 6.1E-29 2.1E-33 154.5 12.0 84 2-92 4-94 (95)
8 1roa_A Cystatin D; inhibitor o 100.0 1E-28 3.5E-33 159.0 13.0 89 3-93 10-121 (122)
9 3l0r_A Cystatin-2, OMC2; SOFT 100.0 1.8E-28 6.3E-33 156.9 13.0 89 2-94 2-111 (115)
10 3gax_A Cystatin-C; cysteine pr 100.0 2.7E-28 9.3E-33 156.8 12.8 90 2-93 8-119 (120)
11 2o9u_X Monellin chain B and mo 100.0 2.9E-29 9.8E-34 155.7 7.5 85 4-96 1-97 (97)
12 2ch9_A Cystatin F; inhibitor, 100.0 7.1E-28 2.4E-32 157.2 13.6 91 2-94 15-128 (131)
13 3mwz_A Sialostatin L2; antipar 100.0 2.5E-27 8.4E-32 151.2 14.0 90 2-93 4-114 (115)
14 2oct_A Cystatin B; stefin, amy 99.9 3.5E-24 1.2E-28 133.7 9.7 85 2-91 1-87 (98)
15 1cyu_A Cystatin A, stefin A; p 99.9 1.4E-24 4.7E-29 135.2 5.3 85 2-91 1-87 (98)
16 2bo9_B Human latexin, MUM; met 97.4 0.0079 2.7E-07 41.7 12.7 82 14-95 5-95 (222)
17 1kwi_A Protegrin-3 precursor; 95.5 0.11 3.7E-06 31.9 7.5 73 17-93 3-97 (101)
18 2cio_B Inhibitor of cysteine p 67.4 18 0.00062 22.2 5.7 39 50-91 75-115 (121)
19 2h7w_A Chagasin; beta-strands, 53.8 32 0.0011 21.5 5.1 38 51-91 87-126 (131)
20 3m86_A Amoebiasin-2; cysteine 48.0 43 0.0015 20.1 5.6 38 52-92 68-107 (111)
21 2wgn_B Inhibitor of cysteine p 47.6 28 0.00097 21.7 4.1 39 50-91 87-127 (132)
22 2cc6_A VNG1446H, dodecin; flav 45.8 38 0.0013 18.9 6.3 46 17-63 14-61 (68)
23 2ux9_A Dodecin; flavoprotein; 45.7 39 0.0013 18.9 6.8 46 17-63 16-63 (69)
24 2yiz_A Dodecin; flavoprotein, 44.7 40 0.0014 18.9 6.9 46 17-63 16-63 (69)
25 2vxa_A Dodecin; flavoprotein, 44.7 41 0.0014 19.0 6.8 46 17-63 17-64 (72)
26 3onr_A Protein transport prote 44.4 42 0.0014 19.0 6.4 46 17-63 16-63 (72)
27 2c34_A ICP, inhibitor of cyste 37.8 57 0.0019 19.7 4.3 38 51-91 72-111 (116)
28 1kmt_A RHO GDP-dissociation in 27.6 34 0.0012 21.8 2.0 32 30-61 39-70 (141)
29 4gpa_A Glutamate receptor 4; P 22.9 1.6E+02 0.0056 19.9 5.1 28 4-35 8-35 (389)
30 1wxa_A Afadin, AF-6 protein; R 22.8 1.3E+02 0.0046 18.1 4.1 27 18-44 35-63 (116)
31 2kvs_A Uncharacterized protein 22.0 67 0.0023 18.5 2.4 20 14-33 53-72 (80)
32 4gq7_A Flocculin, LG-FLO1P; ca 21.7 1.9E+02 0.0066 19.5 5.5 32 44-75 156-187 (224)
33 2cov_D Beta-1,3-xylanase; carb 21.6 1.4E+02 0.0047 17.8 4.5 15 51-65 62-76 (104)
No 1
>1eqk_A Oryzacystatin-I; alpha and beta proteins, cystatin-like fold, cystatin/monellin superfamily, phytocystatin family; NMR {Oryza sativa japonica group} SCOP: d.17.1.2
Probab=100.00 E-value=1.1e-35 Score=186.74 Aligned_cols=95 Identities=61% Similarity=0.940 Sum_probs=91.2
Q ss_pred cccceeEEcCCCCCcHHHHHHHHHHHHHhhhcCCCceeEEEEEEEEEEeccceEEEEEEEEeeCCeeEEEEEEEEEecCC
Q 034261 2 ATVGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFVKVVSAKQQVVSGTLYDITLEAVEGGQKKLFEAKVWEKPWM 81 (100)
Q Consensus 2 ~~~GG~~~~~~~~~d~~v~~~a~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG~nY~i~v~~~~~~~~~~c~~~V~~~pW~ 81 (100)
+++|||++++ +.+||+++++++||+.+||+++++.|.|.+|+++++|||||+||+|+|+++++++.+.|+++||++||+
T Consensus 7 ~~~GG~~~~~-~~~~~~v~~~a~~Av~~~n~~~n~~~~~~~Vv~a~~QVVaG~~Y~l~v~~~~~~~~~~c~~~V~~~PW~ 85 (102)
T 1eqk_A 7 PVLGGVEPVG-NENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTIEVKEGDAKKLYEAKVWEKPWM 85 (102)
T ss_dssp SCSSSSEEEC-CTTCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEEEESSSEEEEEEEEEEETTCCEEEEEEEEEBTTT
T ss_pred CCCcccccCC-CCCCHHHHHHHHHHHHHHHhhcCCceEEEEEEEEEEEEeccEEEEEEEEEecCCCcEEEEEEEEEeeCC
Confidence 5799999975 689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeeEEEEecCCCCC
Q 034261 82 QFKELKEFNTVAQSHS 97 (100)
Q Consensus 82 ~~~~l~~f~~~~~~~~ 97 (100)
++++|++|+|.+++|+
T Consensus 86 ~~~~l~~f~c~~~~~~ 101 (102)
T 1eqk_A 86 DFKELQEFKPVDASAN 101 (102)
T ss_dssp TBCCEEEEECCCCCCC
T ss_pred CceEEEEEEcCCCCCC
Confidence 9999999999999975
No 2
>3ima_B Cysteine proteinase inhibitor; cystatin, tarocystatin, cecpi, papain, phytocystatin, allergen, disulfide bond, hydrolase, protease; 2.03A {Colocasia esculenta} SCOP: d.17.1.0
Probab=100.00 E-value=2e-34 Score=177.97 Aligned_cols=91 Identities=54% Similarity=0.909 Sum_probs=81.9
Q ss_pred cccceeEEcCCCCCcHHHHHHHHHHHHHhhhcCCCceeEEEEEEEEEEeccceEEEEEEEEeeCCeeEEEEEEEEEecCC
Q 034261 2 ATVGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFVKVVSAKQQVVSGTLYDITLEAVEGGQKKLFEAKVWEKPWM 81 (100)
Q Consensus 2 ~~~GG~~~~~~~~~d~~v~~~a~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG~nY~i~v~~~~~~~~~~c~~~V~~~pW~ 81 (100)
+|+|||++++++++||+++++++||+.+||+++++.|.|.+|+++++|||||+||+|+|+++++++.+.|++.||++||+
T Consensus 1 ~~~GG~~~~~~~~~d~~v~~~a~fav~~~n~~~n~~~~~~~Vv~a~~QVVaG~nY~l~v~~~~~~~~~~y~a~V~~~pW~ 80 (91)
T 3ima_B 1 ALMGGIVDVEGAQNSAEVEELARFAVDEHNKKENALLQFSRLVKAKQQVVSGIMHHLTVEVIEGGKKKVYEAKVWVQAWL 80 (91)
T ss_dssp CCBTCEEC------CHHHHHHHHHHHHHHHHHHTCCCEEEEEEEEEEEESSSEEEEEEEEEEETTEEEEEEEEEEEEGGG
T ss_pred CCCcccccCcCCCCCHHHHHHHHHHHHHHHHhcCCceEEEEEEEEEEEEeccEEEEEEEEEecCCceEEEEEEEEEeeCC
Confidence 47999999943489999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeeEEEEec
Q 034261 82 QFKELKEFNTV 92 (100)
Q Consensus 82 ~~~~l~~f~~~ 92 (100)
++++|++|+++
T Consensus 81 ~~~~l~~F~~~ 91 (91)
T 3ima_B 81 NSKKLHEFSPI 91 (91)
T ss_dssp TEEEEEEEEC-
T ss_pred CcEEEEEEEeC
Confidence 99999999974
No 3
>3ul5_A Canecystatin-1; defense, hydrolase inhibitor; 2.30A {Saccharum officinarum} PDB: 3ul6_A*
Probab=100.00 E-value=2.1e-33 Score=184.88 Aligned_cols=95 Identities=47% Similarity=0.818 Sum_probs=78.8
Q ss_pred CcccceeEEc-CCCCCcHHHHHHHHHHHHHhhhcCCCceeEEEEEEEEEEeccceEEEEEEEEee-CCeeEEEEEEEEEe
Q 034261 1 MATVGGVREV-EATANNQEIVNLARFAVDEHNKKQNSNLQFVKVVSAKQQVVSGTLYDITLEAVE-GGQKKLFEAKVWEK 78 (100)
Q Consensus 1 ~~~~GG~~~~-~~~~~d~~v~~~a~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG~nY~i~v~~~~-~~~~~~c~~~V~~~ 78 (100)
|.++|||+++ +++++||+++++|+||+.+||+++++.|+|.+|++|++|||||+||+|+|++.+ +++.+.|+|+||++
T Consensus 43 ~~~~GG~~~i~~~~~ndpeVqela~fAV~e~Nkksn~~l~~~kVv~a~sQVVAG~nY~L~V~a~d~~g~~~~y~a~Vwek 122 (139)
T 3ul5_A 43 VGMVGDVRDAPAGHENDLEAIELARFAVAEHNSKTNAMLEFERLVKVRHQVVAGTMHHFTVQVKEAGGGKKLYEAKVWEK 122 (139)
T ss_dssp -------------CTTCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEEEEEEEEEECSSCCEEEEEEEEEEE
T ss_pred CCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHhCCCceeEEEEEEEEEEEecCEEEEEEEEEecCCCCeEEEEEEEEEe
Confidence 4689999999 223899999999999999999999999999999999999999999999999999 88999999999999
Q ss_pred cCCCceeeEEEEecCCC
Q 034261 79 PWMQFKELKEFNTVAQS 95 (100)
Q Consensus 79 pW~~~~~l~~f~~~~~~ 95 (100)
||+++++|++|+++.+|
T Consensus 123 PW~n~k~L~sF~p~~~~ 139 (139)
T 3ul5_A 123 VWENFKQLQSFQPVGDA 139 (139)
T ss_dssp TTTTEEEEEEEEECC--
T ss_pred eCCCceEEEEEEEcCCC
Confidence 99999999999999874
No 4
>2l4v_A Cystatin; protease inhibitor, hydrolase inhibitor; NMR {Ananas comosus}
Probab=100.00 E-value=1.7e-32 Score=180.08 Aligned_cols=94 Identities=46% Similarity=0.779 Sum_probs=89.5
Q ss_pred cccceeEEcC-CCCCcHHHHHHHHHHHHHhhhcCCCceeEEEEEEEEEEeccceEEEEEEEEeeCCeeEEEEEEEEEecC
Q 034261 2 ATVGGVREVE-ATANNQEIVNLARFAVDEHNKKQNSNLQFVKVVSAKQQVVSGTLYDITLEAVEGGQKKLFEAKVWEKPW 80 (100)
Q Consensus 2 ~~~GG~~~~~-~~~~d~~v~~~a~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG~nY~i~v~~~~~~~~~~c~~~V~~~pW 80 (100)
+++|||++++ ++.+|++++++++||+.+||+++++.|.|.+|+++++|||+|+||+|+|+++++++.+.|+++||++||
T Consensus 41 ~~~GG~~~i~~~~~nd~evqe~a~fAv~e~N~~sn~~~~f~kVv~a~~QVVAG~nY~l~vev~~~~~~~~c~a~Vw~kPW 120 (135)
T 2l4v_A 41 PIMGGIYDAPLNNENGFDKEDLARFAVREYNNKNNALLEFVRVVKAKEQVVSGMMHYLTVEVNDAGKKKLYEAKVWEQVW 120 (135)
T ss_dssp CCCCCSSCCCCTTTTSHHHHHHHHHHHHHHHHHTSCCCEEEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEEECSS
T ss_pred CCCCccCcCCCCCCCCHHHHHHHHHHHHHHHhhcCCceEEEEEEEEEEEEecCEEEEEEEEEecCCceEEEEEEEEEecC
Confidence 4789999996 458999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeEEEEecCCC
Q 034261 81 MQFKELKEFNTVAQS 95 (100)
Q Consensus 81 ~~~~~l~~f~~~~~~ 95 (100)
+++++|++|+|++++
T Consensus 121 ~n~~~L~~f~~~~~~ 135 (135)
T 2l4v_A 121 MNFRQLQEFTYLGDA 135 (135)
T ss_dssp SCCEEEEEEEECSCC
T ss_pred CCceEEEEEEecCCC
Confidence 999999999999874
No 5
>2w9q_A Multicystatin; protease inhibitor, thiol protease inhibitor, hydrolase inhibitor; 2.50A {Solanum tuberosum} PDB: 2w9p_A
Probab=99.97 E-value=1e-30 Score=159.75 Aligned_cols=86 Identities=47% Similarity=0.830 Sum_probs=82.1
Q ss_pred eeEEcCCCCCcHHHHHHHHHHHHHhhhcCCCceeEEEEEEEEEEeccceEEEEEEEEee-CCeeEEEEEEEEEecCCCce
Q 034261 6 GVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFVKVVSAKQQVVSGTLYDITLEAVE-GGQKKLFEAKVWEKPWMQFK 84 (100)
Q Consensus 6 G~~~~~~~~~d~~v~~~a~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG~nY~i~v~~~~-~~~~~~c~~~V~~~pW~~~~ 84 (100)
||+++. |++||+++++++||+.+||+++++.|++.+|+++++|||||+||+|++++++ +++...|+++||++||++++
T Consensus 1 G~~~~~-~~~d~~v~~~~~fAv~~~n~~~n~~~~~~~vv~a~~QVVaG~~Y~l~v~~~~~~~~~~~c~~~V~~~PW~~~~ 79 (87)
T 2w9q_A 1 GIVNVP-NPNNTKFQELARFAIQDYNKKQNAHLEFVENLNVKEQVVAGIMYYITLAATDDAGKKKIYKAKIWVKEWEDFK 79 (87)
T ss_dssp CCEECS-STTSHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEEEEESSSEEEEEEEEEEETTTEEEEEEEEEEEEGGGTEE
T ss_pred CcccCC-CCCCHHHHHHHHHHHHHHHhhcCCceEEEEEEEEEEEEeccEEEEEEEEEecCCCCeEEEEEEEEEeeCCCce
Confidence 799997 7999999999999999999999999999999999999999999999999998 68889999999999999999
Q ss_pred eeEEEEec
Q 034261 85 ELKEFNTV 92 (100)
Q Consensus 85 ~l~~f~~~ 92 (100)
+|++|+++
T Consensus 80 ~l~~f~~~ 87 (87)
T 2w9q_A 80 KVVEFKLV 87 (87)
T ss_dssp EEEEEEEC
T ss_pred EEEeeccC
Confidence 99999874
No 6
>1yvb_I Cystatin; cysteine protease-inhibitor complex, hydrolase-hydrolase INH complex; 2.70A {Gallus gallus} SCOP: d.17.1.2 PDB: 1a67_A 1cew_I 1a90_A
Probab=99.96 E-value=1.5e-29 Score=160.15 Aligned_cols=88 Identities=27% Similarity=0.411 Sum_probs=82.7
Q ss_pred ccceeEEcCCCCCcHHHHHHHHHHHHHhhhcCCCce--eEEEEEEEEEEeccceEEEEEEEEeeC---------------
Q 034261 3 TVGGVREVEATANNQEIVNLARFAVDEHNKKQNSNL--QFVKVVSAKQQVVSGTLYDITLEAVEG--------------- 65 (100)
Q Consensus 3 ~~GG~~~~~~~~~d~~v~~~a~~Av~~~n~~~~~~~--~~~~V~~a~~QVVaG~nY~i~v~~~~~--------------- 65 (100)
|+|||++++ .+||+++++++||+.+||+++++.| ++.+|++|++|||+|++|+|+|+++++
T Consensus 2 ~~Gg~~~~~--~~d~~v~~~~~~av~~~N~~s~~~~~~~l~~v~~a~~QvVaG~~y~l~v~v~~t~C~k~~~~~~~C~~~ 79 (111)
T 1yvb_I 2 LLGAPVPVD--ENDEGLQRALQFAMAEYNRASNDKYSSRVVRVISAKRQLVSGIKYILQVEIGRTTCPKSSGDLQSCEFH 79 (111)
T ss_dssp CTTCEECCC--TTCHHHHHHHHHHHHHHHHHCCCSSCEEEEEECCCEEEESSSEEEEEEEEEEEBSSCSSSSCSSCCCBC
T ss_pred CCCCceECC--CCCHHHHHHHHHHHHHHHHhCCCcceeEEEEEEEEEEEEECCeEEEEEEEEEccccCCCCCCcccCCCC
Confidence 689999997 9999999999999999999988876 899999999999999999999999985
Q ss_pred -----CeeEEEEEEEEEecCCCceeeEEEEec
Q 034261 66 -----GQKKLFEAKVWEKPWMQFKELKEFNTV 92 (100)
Q Consensus 66 -----~~~~~c~~~V~~~pW~~~~~l~~f~~~ 92 (100)
++...|.++||.+||+++++|++|+|.
T Consensus 80 ~~~~~~~~~~C~~~V~~~pW~~~~~l~~~~C~ 111 (111)
T 1yvb_I 80 DEPEMAKYTTCTFVVYSIPWLNQIKLLESKCQ 111 (111)
T ss_dssp SSTTTSCCEEEEEEEEEEGGGTEEEEEEEEEC
T ss_pred CCcccccccEEEEEEEecCCCCccEeeccccC
Confidence 367899999999999999999999994
No 7
>2kxg_A Aspartic protease inhibitor; sqapi, protein, hydrolase inhib; NMR {Cucurbita maxima}
Probab=99.96 E-value=6.1e-29 Score=154.54 Aligned_cols=84 Identities=25% Similarity=0.426 Sum_probs=79.8
Q ss_pred cccceeEEcCCCCCcHHHHHHHHHHHHHhhhcCCCceeEEEEEEEEEEeccce-----EEEEEEEEeeC--CeeEEEEEE
Q 034261 2 ATVGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFVKVVSAKQQVVSGT-----LYDITLEAVEG--GQKKLFEAK 74 (100)
Q Consensus 2 ~~~GG~~~~~~~~~d~~v~~~a~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG~-----nY~i~v~~~~~--~~~~~c~~~ 74 (100)
+++|||++++ .+||+++++|+||+.+||++ .++|.+|++| |||+|+ ||+|++++.++ ++.+.|+++
T Consensus 4 ~~~Gg~~~i~--~nd~~v~e~a~fAv~e~N~~---~l~~~~Vv~a--QVVaG~~~~~~~Y~L~l~~~~~~~~~~~~y~a~ 76 (95)
T 2kxg_A 4 PAIGEVIGIS--VNDPRVKEIAEFALKQHAEQ---NLILAGVDAG--QIIKGIPHWDNYYNLILSAKHSPHEFSKFYNVV 76 (95)
T ss_dssp CSSCCCCCCC--TTCHHHHHHHHHHHHHCCTT---CCEEEEEEEE--EEECSSCSSCCEEEEEEEEESCTTSCCEEEEEE
T ss_pred CCCCcceECC--CCCHHHHHHHHHHHHHHHhh---CcEEEEEEEE--eEecCccccCccEEEEEEEecCCCCCceEEEEE
Confidence 5789999996 99999999999999999987 6899999999 999999 99999999998 888999999
Q ss_pred EEEecCCCceeeEEEEec
Q 034261 75 VWEKPWMQFKELKEFNTV 92 (100)
Q Consensus 75 V~~~pW~~~~~l~~f~~~ 92 (100)
||++||+++++|++|++.
T Consensus 77 Vw~kpW~n~~~L~sF~~~ 94 (95)
T 2kxg_A 77 VLEKASDNSLKLVAFVPL 94 (95)
T ss_dssp EEEETTTTEEEEEEEEEC
T ss_pred EEEccCCCcEEEEEeEec
Confidence 999999999999999974
No 8
>1roa_A Cystatin D; inhibitor of cysteine pepidases, protein binding; 1.80A {Homo sapiens} SCOP: d.17.1.2 PDB: 1rn7_A
Probab=99.96 E-value=1e-28 Score=158.98 Aligned_cols=89 Identities=20% Similarity=0.369 Sum_probs=80.9
Q ss_pred ccceeEEcCCCCCcHHHHHHHHHHHHHhhhc-CCCce--eEEEEEEEEEEeccceEEEEEEEEeeCC-------------
Q 034261 3 TVGGVREVEATANNQEIVNLARFAVDEHNKK-QNSNL--QFVKVVSAKQQVVSGTLYDITLEAVEGG------------- 66 (100)
Q Consensus 3 ~~GG~~~~~~~~~d~~v~~~a~~Av~~~n~~-~~~~~--~~~~V~~a~~QVVaG~nY~i~v~~~~~~------------- 66 (100)
++|||++++ .+||+++++++||+.+||++ +++.| ++.+|++|++|||+|+||+|+|+++++.
T Consensus 10 ~~Gg~~~~~--~~d~~v~~~a~~Av~~~N~~~s~~~~~~~l~~v~~a~~QVVaG~~Y~l~v~v~~t~C~k~~~~~~~C~~ 87 (122)
T 1roa_A 10 LAGGIHATD--LNDKSVQRALDFAISEYNKVINKDEYYSRPLQVMAAYQQIVGGVNYYFNVKFGRTTCTKSQPNLDNCPF 87 (122)
T ss_dssp --CCEEEEC--TTSHHHHHHHHHHHHHHHHTTCCCSEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEETTSSCCSSCCB
T ss_pred CCCCCeECC--CCCHHHHHHHHHHHHHHHhcccCCCceeEEEEEEEEEEEEECCeEEEEEEEEEccccCCCCCCcccCCC
Confidence 789999996 99999999999999999999 99887 4599999999999999999999998852
Q ss_pred -------eeEEEEEEEEEecCCCceeeEEEEecC
Q 034261 67 -------QKKLFEAKVWEKPWMQFKELKEFNTVA 93 (100)
Q Consensus 67 -------~~~~c~~~V~~~pW~~~~~l~~f~~~~ 93 (100)
+...|.++||.+||+++++|++|+|.+
T Consensus 88 ~~~~~~~~~~~C~~~V~~~PW~~~~~l~~~~C~~ 121 (122)
T 1roa_A 88 NDQPKLKEEEFCSFQINEVPWEDKISILNYKCRK 121 (122)
T ss_dssp CCSTTCCCCEEEEEEEEEETTTTEEEEEEEEEEE
T ss_pred CCCcccccceEEEEEEEecccCCccEECcccccC
Confidence 478999999999999999999999963
No 9
>3l0r_A Cystatin-2, OMC2; SOFT TICK, protease inhibitor, thiol protease INHI hydrolase inhibitor; 2.45A {Ornithodoros moubata}
Probab=99.96 E-value=1.8e-28 Score=156.90 Aligned_cols=89 Identities=24% Similarity=0.430 Sum_probs=80.8
Q ss_pred cccceeEEcCCCCCcHHHHHHHHHHHHHhhhcCCCce--eEEEEEEEEEEeccceEEEEEEEEee---------------
Q 034261 2 ATVGGVREVEATANNQEIVNLARFAVDEHNKKQNSNL--QFVKVVSAKQQVVSGTLYDITLEAVE--------------- 64 (100)
Q Consensus 2 ~~~GG~~~~~~~~~d~~v~~~a~~Av~~~n~~~~~~~--~~~~V~~a~~QVVaG~nY~i~v~~~~--------------- 64 (100)
+|+|||++++ ++||+++++|+||+. |+++++.| ++.+|++|++|||||+||+|+|++++
T Consensus 2 ~~~GG~~~i~--~~d~~v~~~a~~Av~--N~~s~~~~~~~~~kV~~a~~QVVaG~~Y~i~v~v~~t~C~K~~~~~~~~~C 77 (115)
T 3l0r_A 2 SIPGGWTRQD--PTEARFLELAHFATS--SQTEGREFYDTVVTVKEVETQVVAGMNYKLTIEISPSVCKIGEVQYSAEQC 77 (115)
T ss_dssp -CCCSCEEEC--TTCHHHHHHHHHHHT--TCCTTCSEEEEEEEEEEEEEEESSSEEEEEEEEEEEEEEEBTTBCCCTTTC
T ss_pred CCcccceeCC--CCCHHHHHHHHHHHh--ccccCCCcceEEEEEEEEEEEEEeeEEEEEEEEEecccccccccccccccC
Confidence 4789999997 799999999999999 88888875 78999999999999999999999975
Q ss_pred ----CCeeEEEEEEEEEecCCCceeeEEEEecCC
Q 034261 65 ----GGQKKLFEAKVWEKPWMQFKELKEFNTVAQ 94 (100)
Q Consensus 65 ----~~~~~~c~~~V~~~pW~~~~~l~~f~~~~~ 94 (100)
+++...|.++||.+||+++++|++|.|.+-
T Consensus 78 ~~~~~~~~~~C~~~V~~~PW~~~~~l~~~~~~~~ 111 (115)
T 3l0r_A 78 VPKDAQQKSTCVAVIYHVPWQNQKSVTSYRCEHH 111 (115)
T ss_dssp CBSCTTSCEEEEEEEEEEGGGTEEEEEEEEECC-
T ss_pred cccCCCceeEEEEEEEEecCCCeeEEEEEEcccc
Confidence 257889999999999999999999999864
No 10
>3gax_A Cystatin-C; cysteine protease inhibitor, 3D domain swapping, protein AGG amyloid, protein engineering, twinning; 1.70A {Homo sapiens} SCOP: d.17.1.2 PDB: 1g96_A 1tij_A 3qrd_A 3ps8_A 3nx0_A 3sva_A 3s67_A 1r4c_A
Probab=99.96 E-value=2.7e-28 Score=156.77 Aligned_cols=90 Identities=24% Similarity=0.373 Sum_probs=80.3
Q ss_pred cccceeEEcCCCCCcHHHHHHHHHHHHHhhhcCCCc--eeEEEEEEEEEEeccceEEEEEEEEeeC--------------
Q 034261 2 ATVGGVREVEATANNQEIVNLARFAVDEHNKKQNSN--LQFVKVVSAKQQVVSGTLYDITLEAVEG-------------- 65 (100)
Q Consensus 2 ~~~GG~~~~~~~~~d~~v~~~a~~Av~~~n~~~~~~--~~~~~V~~a~~QVVaG~nY~i~v~~~~~-------------- 65 (100)
+++|||++++ .+||+++++++||+.+||+++++. |++.+|++|++|||+|++|+|+|+++++
T Consensus 8 ~~~Gg~~~~~--~~d~~v~~~a~~av~~~N~~sn~~~~~~~~~v~~a~~QvVaG~~Y~l~v~v~~t~C~K~~~~~~~C~~ 85 (120)
T 3gax_A 8 RLVGGPMDAS--VEEEGVRRALDFAVGEYNKASNDMYHSRACQVVRARKQIVAGVNYFLDVELCRTTCTKTQPNLDNCPF 85 (120)
T ss_dssp ----CCEEEC--TTSHHHHHHHHHHHHHHHHHCCCSEEEEEEEEEEEEEEESSSEEEEEEEEEEEEEEESCC--CCCCCB
T ss_pred ccCCCCEeCC--CCCHHHHHHHHHHHHHHHhccCCcceeeEEEEEEEEEEEecCeEEEEEEEEEeeeccCCCCCcccCCC
Confidence 4689999997 999999999999999999999887 6889999999999999999999999872
Q ss_pred ------CeeEEEEEEEEEecCCCceeeEEEEecC
Q 034261 66 ------GQKKLFEAKVWEKPWMQFKELKEFNTVA 93 (100)
Q Consensus 66 ------~~~~~c~~~V~~~pW~~~~~l~~f~~~~ 93 (100)
++...|.++||.+||+++++|++++|..
T Consensus 86 ~~~~~~~~~~~C~~~V~~~PW~~~~~l~~~~C~~ 119 (120)
T 3gax_A 86 HDQPHLKRKAFCSFQIYAVPWQGTMTLSKSTCQD 119 (120)
T ss_dssp CSSHHHHCCEEEEEEEEEETTTTEEEEEEEEEEE
T ss_pred cCCccccCceEEEEEEEecCCCCeEEeccceecC
Confidence 3578999999999999999999999963
No 11
>2o9u_X Monellin chain B and monellin chain A; alternative conformations, 3-10 polyproline II helix, plant protein; 1.15A {Dioscoreophyllum cumminsii} SCOP: d.17.1.1 PDB: 3pxm_A 1m9g_A 3pyj_A 1fa3_A 1iv7_A 3q2p_A 1iv9_A 1mnl_A 1mol_A 1fuw_A 4mon_B 3mon_B 1krl_B 4mon_A 1krl_A 3mon_A 2q33_B* 2q33_A*
Probab=99.96 E-value=2.9e-29 Score=155.71 Aligned_cols=85 Identities=28% Similarity=0.367 Sum_probs=77.4
Q ss_pred cceeEEcCCCCCcHHHHHHHHHHHHHhhhcC-CCceeEEEEEEE-----------EEEeccceEEEEEEEEeeCCeeEEE
Q 034261 4 VGGVREVEATANNQEIVNLARFAVDEHNKKQ-NSNLQFVKVVSA-----------KQQVVSGTLYDITLEAVEGGQKKLF 71 (100)
Q Consensus 4 ~GG~~~~~~~~~d~~v~~~a~~Av~~~n~~~-~~~~~~~~V~~a-----------~~QVVaG~nY~i~v~~~~~~~~~~c 71 (100)
.|||++++ + ||+++++|+||+++||++. ++.++|.+|+++ ++| |+|+||+|+|++.++ .|
T Consensus 1 ~Ggw~~id--v-~~~iqela~FAV~e~nk~~~~~~L~f~~Vv~~~~~~~~~~~~~~~Q-VaG~nY~Ltlea~d~----~y 72 (97)
T 2o9u_X 1 MGEWEIID--I-GPFTQNLGKFAVDEENKIGQYGRLTFNKVIRPCMKKTIYENEGFRE-IKGYEYQLYVYASDK----LF 72 (97)
T ss_dssp -CCCEEEC--C-SHHHHHHHHHHHHHHHHHCTTCSCCEEEEEEEEEEEEEECSSSSCS-EEEEEEEEEEEETTE----EC
T ss_pred CCCceECC--C-CHHHHHHHHHHHHHHhccccCCCcEEEEEEEcccccccccchhhee-eccEEEEEEEEEeCC----ce
Confidence 49999995 7 9999999999999999986 788999999999 999 999999999999887 99
Q ss_pred EEEEEEecCCCceeeEEEEecCCCC
Q 034261 72 EAKVWEKPWMQFKELKEFNTVAQSH 96 (100)
Q Consensus 72 ~~~V~~~pW~~~~~l~~f~~~~~~~ 96 (100)
+|.||++||+++++|++|+|.-+.|
T Consensus 73 eA~V~ekpw~n~k~L~sF~~~~~~~ 97 (97)
T 2o9u_X 73 RADISEDYKTRGRKLLRFNGPVPPP 97 (97)
T ss_dssp -CEEEEETTTCCEEEEECCCCCCCC
T ss_pred EEEEEEecCCCcEEeeEccCCCCCC
Confidence 9999999999999999999765443
No 12
>2ch9_A Cystatin F; inhibitor, cysteine protease inhibitor, glycoprotein; HET: NAG FUL; 2.10A {Homo sapiens}
Probab=99.96 E-value=7.1e-28 Score=157.19 Aligned_cols=91 Identities=22% Similarity=0.367 Sum_probs=82.6
Q ss_pred cccceeEEcCCCCCcHHHHHHHHHHHHHhhhcCCCce--eEEEEEEEEEEeccceEEEEEEEEeeC--------------
Q 034261 2 ATVGGVREVEATANNQEIVNLARFAVDEHNKKQNSNL--QFVKVVSAKQQVVSGTLYDITLEAVEG-------------- 65 (100)
Q Consensus 2 ~~~GG~~~~~~~~~d~~v~~~a~~Av~~~n~~~~~~~--~~~~V~~a~~QVVaG~nY~i~v~~~~~-------------- 65 (100)
+++|||++++ .+||++++++++|+.+||+++++.| ++.+|++|++|||+|++|+|+|+++++
T Consensus 15 ~~~Gg~~~~~--~~d~ev~e~a~~Av~~~N~~sn~~~~~~l~~V~~a~~QVVaG~~Y~l~v~v~~t~C~K~~~~~~~~C~ 92 (131)
T 2ch9_A 15 VKPGFPKTIK--TNDPGVLQAARYSVEKFNNCTNDMFLFKESRITRALVQIVKGLKYMLEVEIGRTTCKKNQHLRLDDCD 92 (131)
T ss_dssp SCCCCCEECC--TTCHHHHHHHHHHHHHHHHHSCCSEEEEEEEEEEEEEEESSSEEEEEEEEEEEEEEETTSCCCGGGCC
T ss_pred cCCCCCeeCC--CCCHHHHHHHHHHHHHHHHhCCCCcceEEEEEEEeeeEecCCeEEEEEEEEEcccccCCCCCccccCC
Confidence 5799999997 8999999999999999999988876 679999999999999999999999863
Q ss_pred ----C---eeEEEEEEEEEecCCCceeeEEEEecCC
Q 034261 66 ----G---QKKLFEAKVWEKPWMQFKELKEFNTVAQ 94 (100)
Q Consensus 66 ----~---~~~~c~~~V~~~pW~~~~~l~~f~~~~~ 94 (100)
+ +...|.++||.+||+++.+|++|.|-+-
T Consensus 93 ~~~~~~~~~~~~C~~~V~~~PW~~~~~l~~f~~~~~ 128 (131)
T 2ch9_A 93 FQTNHTLKQTLSCYSEVWVVPWLQHFEVPVLRCHHH 128 (131)
T ss_dssp BCCSTTTCCEEEEEEEEEEEGGGTEEEEEEEEEECC
T ss_pred cccCcccccccEEEEEEEEecCCCeeEEEEEecccc
Confidence 1 2358999999999999999999999754
No 13
>3mwz_A Sialostatin L2; antiparallel beta-sheet, hydrolase inhibitor; HET: MSE; 1.52A {Ixodes scapularis} PDB: 3lh4_A 3li7_A
Probab=99.95 E-value=2.5e-27 Score=151.22 Aligned_cols=90 Identities=24% Similarity=0.402 Sum_probs=81.4
Q ss_pred cccceeEEcCCCCCcHHHHHHHHHHHHHhhhcCC-Cce--eEEEEEEEEEEeccceEEEEEEEEee--------------
Q 034261 2 ATVGGVREVEATANNQEIVNLARFAVDEHNKKQN-SNL--QFVKVVSAKQQVVSGTLYDITLEAVE-------------- 64 (100)
Q Consensus 2 ~~~GG~~~~~~~~~d~~v~~~a~~Av~~~n~~~~-~~~--~~~~V~~a~~QVVaG~nY~i~v~~~~-------------- 64 (100)
.++|||++++ +.+||+++++++||+.+||++++ +.| ++.+|++|++|||+|+||+|+|++++
T Consensus 4 ~~~Gg~~~~~-~~~~~~v~~~~~~av~~~N~~sn~~~~~~~~~~V~~a~~QvVaG~~Y~l~v~v~~t~C~K~~~~~~~~C 82 (115)
T 3mwz_A 4 ALRGGYRERS-NQDDPEYLEMAHYATSTWSAQQPGKTHFDTVVEVMKVETQTVAGTNYRLTLKVAESTCELTSTYNKDTC 82 (115)
T ss_dssp CCSSCCEEEC-TTSCTHHHHHHHHHHHHHHHTSTTCCEEEEEEEEEEEEEEESSSEEEEEEEEEEEEEEETTSCCCTTTC
T ss_pred ccCCcceECC-CCCCHHHHHHHHHHHHHHHhhcCCcccceeeeeeeEEEeeccCCEEEEEEEEEEeccccCCCcCCcccC
Confidence 5799999998 23999999999999999999987 655 67999999999999999999999964
Q ss_pred ----CCeeEEEEEEEEEecCCCceeeEEEEecC
Q 034261 65 ----GGQKKLFEAKVWEKPWMQFKELKEFNTVA 93 (100)
Q Consensus 65 ----~~~~~~c~~~V~~~pW~~~~~l~~f~~~~ 93 (100)
+++...|.++||.+| +++++|++|+|..
T Consensus 83 ~~~~~~~~~~C~~~V~~~P-~~~~~l~~~~C~~ 114 (115)
T 3mwz_A 83 QANANAAQRTCTTVIYRNM-QGEKSINSFECAA 114 (115)
T ss_dssp CCCTTSCEEEEEEEEEECT-TSCEEEEEEEECC
T ss_pred CCCCCCCeeEEEEEEEECC-CCEEEEccccccC
Confidence 367899999999999 9999999999964
No 14
>2oct_A Cystatin B; stefin, amyloid, domain-swapping, hand shaking, PR isomerization, protein binding; 1.40A {Homo sapiens} PDB: 1stf_I*
Probab=99.91 E-value=3.5e-24 Score=133.66 Aligned_cols=85 Identities=24% Similarity=0.305 Sum_probs=78.6
Q ss_pred cccceeEEcCCCCCcHHHHHHHHHHHHHhhhcCCCceeEEEEEEEEEEeccceEEEEEEEEeeCCeeEEEEEEEEEe-c-
Q 034261 2 ATVGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFVKVVSAKQQVVSGTLYDITLEAVEGGQKKLFEAKVWEK-P- 79 (100)
Q Consensus 2 ~~~GG~~~~~~~~~d~~v~~~a~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG~nY~i~v~~~~~~~~~~c~~~V~~~-p- 79 (100)
||+|||++++ .+||++++++++|+.++|++.+..|.+.+++++++|||||+||+|++++++++ .+++.||.. |
T Consensus 1 mm~GG~~~~~--~~~~evq~i~~~a~~~~n~~~~~~~~~~~vv~~~tQVVAG~NY~ikv~v~~~~---~~h~~vy~~lp~ 75 (98)
T 2oct_A 1 MMSGAPSATQ--PATAETQHIADQVRSQLEEKYNKKFPVFKAVSFKSQVVAGTNYFIKVHVGDED---FVHLRVFQSLPH 75 (98)
T ss_dssp -CCSSCCCCE--ECCHHHHHHHHHHHHHHHHHHTSCCSCCEEEEEEEEEEEEEEEEEEEECSTTC---EEEEEEEEESST
T ss_pred CCcccCcCCC--CCCHHHHHHHHHHHHHHHhhcCCccceeEEEEEEEEEeCCEEEEEEEEECCCc---EEEEEEEecCCC
Confidence 3699999997 79999999999999999999999999999999999999999999999999874 789999997 4
Q ss_pred CCCceeeEEEEe
Q 034261 80 WMQFKELKEFNT 91 (100)
Q Consensus 80 W~~~~~l~~f~~ 91 (100)
|.+..+|++|++
T Consensus 76 ~~~~~~l~~~q~ 87 (98)
T 2oct_A 76 ENKSLTLSNYQT 87 (98)
T ss_dssp TCCCEEEEEEEE
T ss_pred CCCceEEEEEec
Confidence 788999999987
No 15
>1cyu_A Cystatin A, stefin A; proteinase inhibitor (cysteine); NMR {Homo sapiens} SCOP: d.17.1.2 PDB: 1cyv_A 1gd3_A 1dvc_A 1dvd_A 1n9j_A 1nb3_I* 1nb5_I* 3k9m_C 3kfq_C 3kse_D* 1gd4_A
Probab=99.90 E-value=1.4e-24 Score=135.21 Aligned_cols=85 Identities=24% Similarity=0.279 Sum_probs=78.7
Q ss_pred cccceeEEcCCCCCcHHHHHHHHHHHHHhhhcCCCceeEEEEEEEEEEeccceEEEEEEEEeeCCeeEEEEEEEEEec--
Q 034261 2 ATVGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFVKVVSAKQQVVSGTLYDITLEAVEGGQKKLFEAKVWEKP-- 79 (100)
Q Consensus 2 ~~~GG~~~~~~~~~d~~v~~~a~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG~nY~i~v~~~~~~~~~~c~~~V~~~p-- 79 (100)
||+|||++++ .+||+++++++||+.++|+++++.|++.+|++|++|||||+||+|+++++++. ..++.||...
T Consensus 1 ~~~GG~~~~~--~~d~ev~~~a~~av~~~n~~~n~~~~~~~vv~a~~QVVaG~nY~l~v~~~~~~---c~~~~V~~~l~~ 75 (98)
T 1cyu_A 1 MIPGGLSEAK--PATPEIQEIVDKVKPQLEEKTNETYGKLEAVQYKTQVVAGTNYYIKVRAGDNK---YLHLKVFKSLPG 75 (98)
T ss_dssp CCCSSCSSEE--ESCTTHHHHHHHTCTTTTTSSCCSSSCEEEEEEEEECSSSCEEEEEEEECSSC---BCEEEEECCCSS
T ss_pred CCCcccccCC--CCCHHHHHHHHHHHHHHHhhcCCCcceEEEEEEEEEEecceEEEEEEEEcCCc---EEEEEEecCCCC
Confidence 3699999997 89999999999999999999999999999999999999999999999999974 6789999874
Q ss_pred CCCceeeEEEEe
Q 034261 80 WMQFKELKEFNT 91 (100)
Q Consensus 80 W~~~~~l~~f~~ 91 (100)
|.+.++|.+|+.
T Consensus 76 ~~~~~~l~~~q~ 87 (98)
T 1cyu_A 76 QNEDLVLTGYQV 87 (98)
T ss_dssp SCCCCEEEEEEC
T ss_pred CCCCeEEEEEec
Confidence 788999999986
No 16
>2bo9_B Human latexin, MUM; metallocarboxypeptidase, X-RAY endogenous protein inhibitor, metalloprotease carboxypeptidase, hydrolase; HET: NAG; 1.6A {Homo sapiens} SCOP: d.17.1.5 d.17.1.5 PDB: 1wnh_A
Probab=97.40 E-value=0.0079 Score=41.66 Aligned_cols=82 Identities=18% Similarity=0.105 Sum_probs=64.4
Q ss_pred CCcHHHHHHHHHHHHHhhhcCCCce---eEEEEEEEEEEecc--ceEEEEEEEEee---CCeeEEEEEEEEEec-CCCce
Q 034261 14 ANNQEIVNLARFAVDEHNKKQNSNL---QFVKVVSAKQQVVS--GTLYDITLEAVE---GGQKKLFEAKVWEKP-WMQFK 84 (100)
Q Consensus 14 ~~d~~v~~~a~~Av~~~n~~~~~~~---~~~~V~~a~~QVVa--G~nY~i~v~~~~---~~~~~~c~~~V~~~p-W~~~~ 84 (100)
++-=..+++|+.|+.-+|-..++.+ .+.+|.+|+..+++ |-+|.|+|.+.+ ++....|.|+|+-.+ -.+..
T Consensus 5 psh~~a~rAA~vA~hy~N~~~gSP~~l~~L~~V~~a~a~~ip~~G~Ky~l~Fs~e~~~~~~~~~~CsA~Vlf~~~~qk~~ 84 (222)
T 2bo9_B 5 PTNYPASRAALVAQNYINYQQGTPHRVFEVQKVKQASMEDIPGRGHKYRLKFAVEEIIQKQVKVNCTAEVLYPSTGQETA 84 (222)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHCBTTBCEEEEEEEEEEEEEETTTEEEEEEEEEEEETTTCCCEEEEEEEEEEECTTCCCC
T ss_pred CcchHHHHHHHHHHHHhhcccCCCceeeehhhhhhhhhhhccCCCcEEEEEEEeeeeecCCceeEEEEEEEEccCCCCCC
Confidence 4444577899999999999988754 56889999999986 579999999998 467889999999864 33456
Q ss_pred eeEEEEecCCC
Q 034261 85 ELKEFNTVAQS 95 (100)
Q Consensus 85 ~l~~f~~~~~~ 95 (100)
--..|.|.+-.
T Consensus 85 P~Vn~tc~~~~ 95 (222)
T 2bo9_B 85 PEVNFTFEGET 95 (222)
T ss_dssp CEEEEEESSCC
T ss_pred CceEEEEeccc
Confidence 67778887543
No 17
>1kwi_A Protegrin-3 precursor; cathelicidin motif, disulfide, MAD, selenocystine, antimicrobial protein; 2.19A {Sus scrofa} SCOP: d.17.1.3 PDB: 1lxe_A 1n5h_A 1n5p_A 1pfp_A
Probab=95.46 E-value=0.11 Score=31.92 Aligned_cols=73 Identities=15% Similarity=0.123 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHhhhcCCCceeEEEEEEEEEEec----cceEEEEEEEEee------------------CCeeEEEEEE
Q 034261 17 QEIVNLARFAVDEHNKKQNSNLQFVKVVSAKQQVV----SGTLYDITLEAVE------------------GGQKKLFEAK 74 (100)
Q Consensus 17 ~~v~~~a~~Av~~~n~~~~~~~~~~~V~~a~~QVV----aG~nY~i~v~~~~------------------~~~~~~c~~~ 74 (100)
-.|++++..||+.||+++... .+.+++.+.-+-. .|+.+.+.|.+.+ +|-.+.|.-+
T Consensus 3 lsY~EAv~~Av~~~N~~S~~~-nlFRLl~~~p~p~~~~d~~~~~~v~FtIkETvC~~~~~~~p~~CdFke~G~vk~C~Gt 81 (101)
T 1kwi_A 3 LSYREAVLRAVDRLNEQSSEA-NLYRLLELDQPPKADEDPGTPKPVSFTVKETVCPRPTRQPPELCDFKENGRVKQCVGT 81 (101)
T ss_dssp HHHHHHHHHHHHHHHHHCCSS-EEEEEEEEC---------CCCEEEEEEEEEEEEESSCCSCGGGSCBCTTCCEEEEEEE
T ss_pred cCHHHHHHHHHHHHhcCCCcc-ceeeeecccCCCccCCCCCCcceeEEEEeeeecCCCCCCCcccCCccCCCeeeeceEE
Confidence 358999999999999997653 3334444443332 3567888888875 3677789998
Q ss_pred EEEecCCCceeeEEEEecC
Q 034261 75 VWEKPWMQFKELKEFNTVA 93 (100)
Q Consensus 75 V~~~pW~~~~~l~~f~~~~ 93 (100)
|...+.. ....+.|-+
T Consensus 82 v~~~~~~---~~~~i~C~~ 97 (101)
T 1kwi_A 82 VTLDQIK---DPLDITCNE 97 (101)
T ss_dssp ECCC-------CCEEEEEE
T ss_pred EEecCCC---ceEEeeccC
Confidence 8765433 334444543
No 18
>2cio_B Inhibitor of cysteine peptidase; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Trypanosoma brucei}
Probab=67.45 E-value=18 Score=22.19 Aligned_cols=39 Identities=23% Similarity=0.538 Sum_probs=27.7
Q ss_pred eccceEEEEEEEEeeCCeeEEEEEE-EEEecCCCc-eeeEEEEe
Q 034261 50 VVSGTLYDITLEAVEGGQKKLFEAK-VWEKPWMQF-KELKEFNT 91 (100)
Q Consensus 50 VVaG~nY~i~v~~~~~~~~~~c~~~-V~~~pW~~~-~~l~~f~~ 91 (100)
|-+|-.+.++|++.+.| .+.+. +|.|||++. .....|.|
T Consensus 75 vG~gG~~~~~fka~~~G---~~~i~~~Y~RpWe~~~~~~~~f~~ 115 (121)
T 2cio_B 75 VGAGGTMVLEVKALKAG---KHTLSLAYGRPWVGFNAAAKRYNI 115 (121)
T ss_pred eCCCceEEEEEEEecCc---eEEEEEEEECccCCCCCcceEEEE
Confidence 44777889999988754 45555 688999976 44555655
No 19
>2h7w_A Chagasin; beta-strands, immunoglobulin-fold, hydrolase inhibitor; 1.70A {Trypanosoma cruzi} SCOP: b.1.26.1 PDB: 2nnr_A 2oul_B 3cbj_B 3cbk_B 3e1z_A 2fo8_A 2nqd_A*
Probab=53.77 E-value=32 Score=21.45 Aligned_cols=38 Identities=13% Similarity=0.311 Sum_probs=25.8
Q ss_pred ccceEEEEEEEEeeCCeeEEEEEE-EEEecCCCc-eeeEEEEe
Q 034261 51 VSGTLYDITLEAVEGGQKKLFEAK-VWEKPWMQF-KELKEFNT 91 (100)
Q Consensus 51 VaG~nY~i~v~~~~~~~~~~c~~~-V~~~pW~~~-~~l~~f~~ 91 (100)
-+|-.+.++|++.+.| .+++. +|.|||++. .....|.+
T Consensus 87 GagG~~~w~f~A~~~G---~~~i~~~Y~RpWE~~~~~~~~f~l 126 (131)
T 2h7w_A 87 GAGGTEHFHVTVKAAG---THAVNLTYMRPWTGPSHDSERFIV 126 (131)
T ss_dssp TCCEEEEEEEEECSSE---EEEEEEEEECTTTCCCTTCEEEEE
T ss_pred CCCcEEEEEEEEccCc---eEEEEEEEECccCCCCCccEEEEE
Confidence 3667788888887754 44444 588999975 45555655
No 20
>3m86_A Amoebiasin-2; cysteine protease inhibitor, protease, protein binding; HET: 1PE; 1.65A {Entamoeba histolytica} PDB: 3m88_A
Probab=47.95 E-value=43 Score=20.07 Aligned_cols=38 Identities=16% Similarity=0.330 Sum_probs=25.7
Q ss_pred cceEEEEEEEEeeCCeeEEEE-EEEEEecCCCc-eeeEEEEec
Q 034261 52 SGTLYDITLEAVEGGQKKLFE-AKVWEKPWMQF-KELKEFNTV 92 (100)
Q Consensus 52 aG~nY~i~v~~~~~~~~~~c~-~~V~~~pW~~~-~~l~~f~~~ 92 (100)
+|-.+.++|++...| .+. .-+|.+||++. .....|.|.
T Consensus 68 ~gG~~~~~f~a~~~G---~~~i~~~Y~RpWe~~~~~~~tf~~~ 107 (111)
T 3m86_A 68 FPSIREIQLKPLKVG---TTTIKLGYSRPWEKGKEPLRSLTYS 107 (111)
T ss_dssp CSEEEEEEEEESSCE---EEEEEEEEECTTCCSCCCSEEEEEE
T ss_pred CCeeEEEEEEEeCCe---EEEEEEEEECccCCCCCcccEEEEE
Confidence 567788888887654 333 34677899984 556666653
No 21
>2wgn_B Inhibitor of cysteine peptidase compnd 3; hydrolase inhibitor, dynamics, peptidase inhibitor, cathepsi hydrolase inhibitor; NMR {Pseudomonas aeruginosa}
Probab=47.57 E-value=28 Score=21.72 Aligned_cols=39 Identities=21% Similarity=0.301 Sum_probs=25.4
Q ss_pred eccceEEEEEEEEeeCCeeEEEEE-EEEEecCCCc-eeeEEEEe
Q 034261 50 VVSGTLYDITLEAVEGGQKKLFEA-KVWEKPWMQF-KELKEFNT 91 (100)
Q Consensus 50 VVaG~nY~i~v~~~~~~~~~~c~~-~V~~~pW~~~-~~l~~f~~ 91 (100)
|-+|-.+.++|++.+.| .+++ -+|.+||++. .....|.|
T Consensus 87 vGagG~~~w~f~A~~~G---~~~i~~~Y~RpWE~~~~~~~~F~l 127 (132)
T 2wgn_B 87 VGSGGESTWRFRVAASG---DDRLELVYRRPWEKDAEPAESFSC 127 (132)
T ss_dssp SSSSCCEEEEEEECSCE---EEEEEEEEECTTSSSCCCSSEEEE
T ss_pred cCCCceEEEEEEEcCCc---eEEEEEEEECccCCCCCcceEEEE
Confidence 33667788888887754 3443 3677899976 34555554
No 22
>2cc6_A VNG1446H, dodecin; flavoprotein, flavin, flavin-like ligands; HET: LUM; 1.27A {Halobacterium salinarum} SCOP: d.230.2.1 PDB: 2cc7_A* 2cc8_A* 2cc9_A 2ccb_A* 2ccc_A* 2cif_A* 2cjc_A* 1mog_A* 2vx9_A* 2cie_A* 2vkf_A* 2vkg_A*
Probab=45.80 E-value=38 Score=18.90 Aligned_cols=46 Identities=15% Similarity=0.225 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHhhhcCCCceeEEEEEEEEEEeccc--eEEEEEEEEe
Q 034261 17 QEIVNLARFAVDEHNKKQNSNLQFVKVVSAKQQVVSG--TLYDITLEAV 63 (100)
Q Consensus 17 ~~v~~~a~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG--~nY~i~v~~~ 63 (100)
...+++++.|+..-.+- =..+..++|..-+-.|..| ..|+.+++++
T Consensus 14 ~S~edAi~nAi~~AskT-l~ni~~~eV~e~~~~v~dgkv~~yqv~lKV~ 61 (68)
T 2cc6_A 14 ESFTAAADDAIDRAEDT-LDNVVWAEVVDQGVEIGAVEERTYQTEVQVA 61 (68)
T ss_dssp SCHHHHHHHHHHHHHHH-CSCEEEEEEEEEEEECTTSSSCEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhc-ccCCeEEEEEEEEEEEeCCcEEEEEEEEEEE
Confidence 34778888888876654 2357789999999999888 4788888875
No 23
>2ux9_A Dodecin; flavoprotein; HET: FMN COA; 1.4A {Thermus thermophilus} SCOP: d.230.2.1 PDB: 2cz8_A* 2deg_A 2deh_A 2dev_A 2v21_A* 2v18_A* 2vyx_A* 2v19_A*
Probab=45.67 E-value=39 Score=18.94 Aligned_cols=46 Identities=15% Similarity=0.213 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHhhhcCCCceeEEEEEEEEEEeccce--EEEEEEEEe
Q 034261 17 QEIVNLARFAVDEHNKKQNSNLQFVKVVSAKQQVVSGT--LYDITLEAV 63 (100)
Q Consensus 17 ~~v~~~a~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG~--nY~i~v~~~ 63 (100)
...+++++.|+..-.+- =..+..++|..-+-+|..|. .|+.+++++
T Consensus 16 ~S~edAi~nAi~~AskT-l~ni~~~eV~e~~~~v~dgkv~~yqv~lkV~ 63 (69)
T 2ux9_A 16 EGLEAAIQAALARARKT-LRHLDWFEVKEIRGTIGEAGVKEYQVVLEVG 63 (69)
T ss_dssp SCHHHHHHHHHHHHHHH-CCCEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhc-ccCCeEEEEEEEEEEEeCCcEEEEEEEEEEE
Confidence 34778888888876654 23577899999999998884 688888765
No 24
>2yiz_A Dodecin; flavoprotein, flavin binding protein, protein-engineering, P storage protein; HET: COA FMN GOL; 1.70A {Mycobacterium tuberculosis} PDB: 3oqt_A 2yj0_A*
Probab=44.73 E-value=40 Score=18.86 Aligned_cols=46 Identities=13% Similarity=0.247 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHhhhcCCCceeEEEEEEEEEEeccce--EEEEEEEEe
Q 034261 17 QEIVNLARFAVDEHNKKQNSNLQFVKVVSAKQQVVSGT--LYDITLEAV 63 (100)
Q Consensus 17 ~~v~~~a~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG~--nY~i~v~~~ 63 (100)
...+++++.|+..-.+- =..+..++|..-+-+|..|. .|+.+++++
T Consensus 16 ~S~edAi~nAi~~AskT-l~ni~~~eV~e~~~~v~dgkv~~yqv~lkv~ 63 (69)
T 2yiz_A 16 DGVDAAIQGGLARAAQT-MRALDWFEVQSIRGHLVDGAVAHFQVTMKVG 63 (69)
T ss_dssp TCHHHHHHHHHHHHHHH-CCCEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhc-ccCCeEEEEEEEEEEEeCCcEEEEEEEEEEE
Confidence 35778888888877654 23577899999999998884 688888765
No 25
>2vxa_A Dodecin; flavoprotein, flavin, riboflavin, lumichrome, archaea; HET: RBF; 2.60A {Halorhodospira halophila}
Probab=44.72 E-value=41 Score=18.98 Aligned_cols=46 Identities=15% Similarity=0.300 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHhhhcCCCceeEEEEEEEEEEeccce--EEEEEEEEe
Q 034261 17 QEIVNLARFAVDEHNKKQNSNLQFVKVVSAKQQVVSGT--LYDITLEAV 63 (100)
Q Consensus 17 ~~v~~~a~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG~--nY~i~v~~~ 63 (100)
...+++++.|+..-.+- =..+..++|..-+-+|..|. .|+.+++++
T Consensus 17 ~S~edAi~nAi~~AskT-l~ni~~~eV~e~r~~v~dgki~~yqV~lKV~ 64 (72)
T 2vxa_A 17 NGIEEAVNNAIARAGET-LRHLRWFEVVDTRGHIEGGRVNHWQVTVKVG 64 (72)
T ss_dssp SCHHHHHHHHHHHHHHH-CCCEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhh-ccCCeEEEEEEEEEEEeCCcEEEEEEEEEEE
Confidence 35778888888877654 23577899999999998884 688887765
No 26
>3onr_A Protein transport protein SECE2; calcium dodecin, calcium binding protein, dodecamer, imuuno antigen, metal binding protein; 1.80A {Mycobacterium tuberculosis}
Probab=44.40 E-value=42 Score=18.96 Aligned_cols=46 Identities=22% Similarity=0.250 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHhhhcCCCceeEEEEEEEEEEeccc--eEEEEEEEEe
Q 034261 17 QEIVNLARFAVDEHNKKQNSNLQFVKVVSAKQQVVSG--TLYDITLEAV 63 (100)
Q Consensus 17 ~~v~~~a~~Av~~~n~~~~~~~~~~~V~~a~~QVVaG--~nY~i~v~~~ 63 (100)
...+++++.|+.+-.+- =..+..++|..-+-+|..| ..|+.+++++
T Consensus 16 ~S~edAi~nAi~~AskT-l~ni~~~eV~e~~~~v~dgkv~~yqv~lKV~ 63 (72)
T 3onr_A 16 TSWEQAAAEAVQRARDS-VDDIRVARVIEQDMAVDSAGKITYRIKLEVS 63 (72)
T ss_dssp SCHHHHHHHHHHHHHHH-CSCCCEEEEEEEEEEECTTCCEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhc-ccCCeEEEEEEEEEEEeCCcEEEEEEEEEEE
Confidence 34778888888876654 2346788898888889888 4688888775
No 27
>2c34_A ICP, inhibitor of cysteine peptidases; chagasin, immunoglobulin fold; NMR {Leishmania mexicana} SCOP: b.1.26.1
Probab=37.81 E-value=57 Score=19.68 Aligned_cols=38 Identities=16% Similarity=0.367 Sum_probs=25.2
Q ss_pred ccceEEEEEEEEeeCCeeEEEEE-EEEEecCCCc-eeeEEEEe
Q 034261 51 VSGTLYDITLEAVEGGQKKLFEA-KVWEKPWMQF-KELKEFNT 91 (100)
Q Consensus 51 VaG~nY~i~v~~~~~~~~~~c~~-~V~~~pW~~~-~~l~~f~~ 91 (100)
-+|-.+.++|++.+.|. +++ -+|.|||++. .....|.|
T Consensus 72 G~gG~~~~~f~a~~~G~---~~i~~~Y~R~We~~~~~~~~f~~ 111 (116)
T 2c34_A 72 GVGGIYVVLVKPRKRGH---HTLELVYTRPFEGIKPENERYTL 111 (116)
T ss_dssp CCCCEEEEEEEECSSSS---EEEEEEEEBTTTBCCTTSCEEEE
T ss_pred CCCceEEEEEEEeCCce---EEEEEEEECccCCCCCccEEEEE
Confidence 36778889999887552 333 3688999975 34444544
No 28
>1kmt_A RHO GDP-dissociation inhibitor 1; immunoglobulin fold, beta sandwich motif, isoprenyl-binding, protein binding; 1.30A {Homo sapiens} SCOP: b.1.18.8 PDB: 2jhu_A 2jhv_A 2jhw_A 1ft3_A 1ft0_A 1qvy_A 2jhz_A 2bxw_A 2jhx_A 2jhy_A 1rho_A 1fso_A 2ji0_A 2jhs_A* 2jht_A 1ajw_A 1gdf_A
Probab=27.57 E-value=34 Score=21.76 Aligned_cols=32 Identities=16% Similarity=0.136 Sum_probs=23.0
Q ss_pred hhhcCCCceeEEEEEEEEEEeccceEEEEEEE
Q 034261 30 HNKKQNSNLQFVKVVSAKQQVVSGTLYDITLE 61 (100)
Q Consensus 30 ~n~~~~~~~~~~~V~~a~~QVVaG~nY~i~v~ 61 (100)
|.-+.+..|.+.--.+++..+|+|..|.=++.
T Consensus 39 f~iKEG~~Y~iki~F~V~~eivsGLkY~q~v~ 70 (141)
T 1kmt_A 39 FVLKEGVEYRIKISFRVNREIVSGMKYIQHTY 70 (141)
T ss_dssp EEEETTCEEEEEEEEEECSSCEEEEEEEEEEE
T ss_pred eEccCCcEEEEEEEEEEccccccCcEEEEEEE
Confidence 33345677777767778888999999877653
No 29
>4gpa_A Glutamate receptor 4; PBP fold, ligand-gated ION channel, ION transport, transmembrane AMPA receptor regulating proteins, cornichons, ckamp44; HET: NAG; 2.25A {Rattus norvegicus}
Probab=22.88 E-value=1.6e+02 Score=19.94 Aligned_cols=28 Identities=25% Similarity=0.310 Sum_probs=20.9
Q ss_pred cceeEEcCCCCCcHHHHHHHHHHHHHhhhcCC
Q 034261 4 VGGVREVEATANNQEIVNLARFAVDEHNKKQN 35 (100)
Q Consensus 4 ~GG~~~~~~~~~d~~v~~~a~~Av~~~n~~~~ 35 (100)
.||.-+.+ ....+.++++|++++|+..+
T Consensus 8 IG~lf~~~----~~~~~~a~~~Av~~iN~~~~ 35 (389)
T 4gpa_A 8 IGGLFIRN----TDQEYTAFRLAIFLHNTSPN 35 (389)
T ss_dssp EEEEECTT----CHHHHHHHHHHHHHHHTCSC
T ss_pred EEEEEcCC----ChHHHHHHHHHHHHHHhCCC
Confidence 47776654 45667889999999998743
No 30
>1wxa_A Afadin, AF-6 protein; RAS-binding domain, ubiquitin-like fold, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.15.1.5
Probab=22.78 E-value=1.3e+02 Score=18.06 Aligned_cols=27 Identities=4% Similarity=0.036 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHhhhcCC--CceeEEEEE
Q 034261 18 EIVNLARFAVDEHNKKQN--SNLQFVKVV 44 (100)
Q Consensus 18 ~v~~~a~~Av~~~n~~~~--~~~~~~~V~ 44 (100)
...++.+.|+.+|+.+.. ..|.+.+|+
T Consensus 35 ta~~vV~eaLekygL~~~~~~~Y~LveV~ 63 (116)
T 1wxa_A 35 TADFAVAESLEKYGLEKENPKDYCIARVM 63 (116)
T ss_dssp CHHHHHHHHHHHHTCSSSCTTTEEEEEEE
T ss_pred CHHHHHHHHHHHhCCCCCCchheEEEEEE
Confidence 467999999999987642 468888775
No 31
>2kvs_A Uncharacterized protein MW0776; PSI-2, NESG, BIG target, structural genomics, protein structure initiative; NMR {Staphylococcus aureus}
Probab=22.02 E-value=67 Score=18.53 Aligned_cols=20 Identities=5% Similarity=0.099 Sum_probs=16.8
Q ss_pred CCcHHHHHHHHHHHHHhhhc
Q 034261 14 ANNQEIVNLARFAVDEHNKK 33 (100)
Q Consensus 14 ~~d~~v~~~a~~Av~~~n~~ 33 (100)
..++++.++++.|++.|+.+
T Consensus 53 ~~~~~~~e~vkralsly~~~ 72 (80)
T 2kvs_A 53 YTDHQLIETTNRAISLYMAN 72 (80)
T ss_dssp CCCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 46778889999999999875
No 32
>4gq7_A Flocculin, LG-FLO1P; carbohydrate binding domain, PA14 domain, sugar binding PROT; HET: NAG; 2.53A {Saccharomyces pastorianus}
Probab=21.72 E-value=1.9e+02 Score=19.51 Aligned_cols=32 Identities=13% Similarity=0.187 Sum_probs=24.1
Q ss_pred EEEEEEeccceEEEEEEEEeeCCeeEEEEEEE
Q 034261 44 VSAKQQVVSGTLYDITLEAVEGGQKKLFEAKV 75 (100)
Q Consensus 44 ~~a~~QVVaG~nY~i~v~~~~~~~~~~c~~~V 75 (100)
.+++..+++|..|-|+|...+.+..-..++.+
T Consensus 156 ~~~tv~L~aG~yYPIRI~Y~n~~g~A~l~f~~ 187 (224)
T 4gq7_A 156 IKGSTYMYAGYYYPIKIVYSNAKALARLPVSV 187 (224)
T ss_dssp EEEEEEECTTCBEEEEEEEEECSSCEEECEEE
T ss_pred eEEEEEEeCCCEeeEEEEEEeCCCCeEEEEEE
Confidence 45677899999999999998754445555544
No 33
>2cov_D Beta-1,3-xylanase; carbohydrate-binding module, family 31 CBM, beta-1,3-xylanas binding protein; 1.25A {Alcaligenes SP}
Probab=21.61 E-value=1.4e+02 Score=17.78 Aligned_cols=15 Identities=27% Similarity=0.459 Sum_probs=12.6
Q ss_pred ccceEEEEEEEEeeC
Q 034261 51 VSGTLYDITLEAVEG 65 (100)
Q Consensus 51 VaG~nY~i~v~~~~~ 65 (100)
+=|..|+|+|++.|.
T Consensus 62 ~LGqtY~i~FKVeD~ 76 (104)
T 2cov_D 62 VLGQDYKLTFKVEDR 76 (104)
T ss_dssp CTTCEEEEEEEEEET
T ss_pred hcCcceeEEEEEecc
Confidence 358899999999983
Done!