Query 034263
Match_columns 100
No_of_seqs 103 out of 1104
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 19:53:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034263.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034263hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ucz_A UBC7, ubiquitin conjuga 100.0 2.1E-32 7.1E-37 185.2 12.9 85 1-90 1-85 (165)
2 1ayz_A UBC2, ubiquitin-conjuga 100.0 1.6E-32 5.5E-37 186.7 11.8 86 1-93 1-86 (169)
3 2aak_A UBC1, ubiquitin conjuga 100.0 3.1E-32 1.1E-36 182.2 12.0 86 1-93 1-86 (152)
4 1yrv_A Ubiquitin-conjugating l 100.0 2.7E-32 9.4E-37 185.5 11.4 87 1-93 20-106 (169)
5 1zdn_A Ubiquitin-conjugating e 100.0 6.6E-32 2.2E-36 181.7 12.9 82 5-90 12-93 (158)
6 1jat_B Ubiquitin-conjugating e 100.0 5.7E-32 2E-36 178.5 12.3 92 1-94 2-94 (138)
7 2bep_A Ubiquitin-conjugating e 100.0 6.8E-32 2.3E-36 181.7 12.3 87 1-93 5-94 (159)
8 2fo3_A Ubiquitin-conjugating e 100.0 7.2E-32 2.5E-36 175.5 11.5 81 6-90 6-87 (125)
9 2gjd_A Ubiquitin-conjugating e 100.0 5.2E-32 1.8E-36 182.1 11.0 88 1-90 1-89 (157)
10 2c2v_B Ubiquitin-conjugating e 100.0 6.3E-32 2.1E-36 181.2 10.9 84 1-90 2-85 (154)
11 4gpr_A Ubiquitin-conjugating e 100.0 1.6E-31 5.4E-36 178.7 12.7 82 5-90 3-84 (151)
12 3rz3_A Ubiquitin-conjugating e 100.0 1.5E-31 5E-36 183.8 12.8 86 1-90 3-88 (183)
13 3h8k_A Ubiquitin-conjugating e 100.0 1.9E-31 6.3E-36 180.3 12.9 83 5-90 2-84 (164)
14 3rcz_B SUMO-conjugating enzyme 100.0 8.6E-32 2.9E-36 182.2 11.1 86 5-90 9-95 (163)
15 2pwq_A Ubiquitin conjugating e 100.0 1.6E-31 5.4E-36 187.9 12.8 85 5-93 22-106 (216)
16 2e2c_A Ubiquitin conjugating e 100.0 1.4E-31 4.7E-36 179.8 12.0 82 5-90 8-89 (156)
17 1fxt_A Ubiquitin-conjugating e 100.0 8.2E-32 2.8E-36 179.6 10.3 84 7-93 2-85 (149)
18 3k9o_A Ubiquitin-conjugating e 100.0 1.4E-31 4.7E-36 186.1 11.0 87 1-93 2-91 (201)
19 1z2u_A Ubiquitin-conjugating e 100.0 2.5E-31 8.7E-36 177.4 11.8 82 5-90 3-84 (150)
20 1yh2_A HSPC150 protein similar 100.0 5.1E-31 1.8E-35 179.1 12.8 82 5-90 3-84 (169)
21 2h2y_A Ubiquitin-conjugating e 100.0 5.4E-31 1.8E-35 173.6 12.4 82 5-90 19-101 (136)
22 2grr_A Ubiquitin-conjugating e 100.0 2.4E-31 8.2E-36 179.5 10.9 88 1-90 4-92 (161)
23 2ayv_A Ubiquitin-conjugating e 100.0 5.5E-31 1.9E-35 178.6 12.7 82 5-90 20-101 (166)
24 1i7k_A Ubiquitin-conjugating e 100.0 2.2E-31 7.5E-36 182.6 10.6 82 5-90 29-110 (179)
25 2awf_A Ubiquitin-conjugating e 100.0 4.8E-31 1.6E-35 179.8 12.2 83 5-90 16-98 (172)
26 2c4o_A Ubiquitin-conjugating e 100.0 6.4E-31 2.2E-35 178.1 12.3 82 5-90 18-99 (165)
27 2a7l_A Hypothetical ubiquitin- 100.0 2.2E-31 7.4E-36 175.6 9.4 79 8-90 24-106 (136)
28 1jat_A Ubiquitin-conjugating e 100.0 3E-31 1E-35 178.0 9.7 84 5-93 4-87 (155)
29 2r0j_A Ubiquitin carrier prote 100.0 4.7E-31 1.6E-35 176.0 10.2 80 7-90 2-81 (149)
30 2a4d_A Ubiquitin-conjugating e 100.0 1.9E-30 6.5E-35 175.2 12.9 86 5-93 24-112 (160)
31 3e46_A Ubiquitin-conjugating e 100.0 1.7E-30 5.9E-35 186.2 12.3 87 1-93 54-143 (253)
32 2f4z_A Tgtwinscan_2721 - E2 do 100.0 1.3E-30 4.3E-35 180.6 11.0 84 6-93 32-128 (193)
33 3bzh_A Ubiquitin-conjugating e 100.0 4.2E-30 1.4E-34 178.1 12.7 82 5-90 47-128 (194)
34 2q0v_A Ubiquitin-conjugating e 100.0 3.7E-30 1.3E-34 173.1 11.9 85 5-90 20-105 (156)
35 2y9m_A Ubiquitin-conjugating e 100.0 3.2E-30 1.1E-34 175.7 11.5 86 1-92 3-101 (172)
36 1tte_A Ubiquitin-conjugating e 100.0 5.6E-31 1.9E-35 184.9 5.6 85 6-93 2-86 (215)
37 1wzv_A Ubiquitin-conjugating e 100.0 5.9E-30 2E-34 171.6 10.2 80 6-90 4-84 (155)
38 4ds2_A Ubiquitin-conjugating e 100.0 2.5E-30 8.6E-35 175.3 8.1 84 1-90 5-102 (167)
39 2hlw_A Ubiquitin-conjugating e 100.0 9.2E-30 3.1E-34 173.3 10.0 87 6-93 35-122 (170)
40 2z5d_A Ubiquitin-conjugating e 100.0 8.9E-30 3.1E-34 174.6 10.0 85 1-93 20-104 (179)
41 3fn1_B NEDD8-conjugating enzym 100.0 1.6E-29 5.5E-34 171.3 11.1 82 5-90 13-94 (167)
42 2onu_A Ubiquitin-conjugating e 100.0 4.1E-30 1.4E-34 172.1 7.3 81 6-93 2-82 (152)
43 1c4z_D UBCH7, ubiquitin conjug 100.0 1.9E-29 6.6E-34 168.9 6.8 80 7-90 3-82 (154)
44 1y8x_A Ubiquitin-conjugating e 100.0 8.9E-29 3.1E-33 166.8 10.1 79 5-90 5-84 (160)
45 1yf9_A Ubiquitin carrier prote 100.0 1E-28 3.4E-33 168.2 9.4 80 6-93 12-91 (171)
46 4ddg_A Ubiquitin-conjugating e 100.0 1.7E-28 5.9E-33 185.0 11.6 82 5-90 2-83 (399)
47 2nvu_C NEDD8-conjugating enzym 100.0 1.4E-28 4.7E-33 168.7 9.5 79 5-90 25-104 (180)
48 2f4w_A Ubiquitin-conjugating e 99.9 5E-27 1.7E-31 161.8 11.5 80 5-90 13-92 (187)
49 1zuo_A Hypothetical protein LO 99.9 6.5E-28 2.2E-32 166.1 6.5 81 5-89 26-122 (186)
50 3ceg_A Baculoviral IAP repeat- 99.9 7E-27 2.4E-31 172.1 12.1 82 5-90 75-165 (323)
51 3o2u_A NEDD8-conjugating enzym 99.9 3.5E-27 1.2E-31 162.9 9.5 79 5-90 28-113 (190)
52 2z6o_A UFM1-conjugating enzyme 99.9 5.7E-23 1.9E-27 138.7 1.1 74 7-90 33-117 (172)
53 3kpa_A Probable ubiquitin fold 99.4 1.6E-14 5.6E-19 96.0 0.6 74 7-90 35-119 (168)
54 3r3q_A Suppressor protein STP2 99.2 5.1E-11 1.8E-15 80.2 6.7 80 8-93 30-127 (162)
55 3obq_A Tumor susceptibility ge 98.7 4.2E-08 1.4E-12 64.9 6.2 51 37-93 51-109 (146)
56 2ebm_A RWD domain-containing p 96.9 0.011 3.7E-07 37.1 9.1 68 7-80 11-78 (128)
57 2day_A Ring finger protein 25; 96.3 0.062 2.1E-06 33.5 9.3 71 9-81 11-83 (128)
58 2yz0_A Serine/threonine-protei 96.2 0.076 2.6E-06 33.6 9.4 71 8-81 12-86 (138)
59 2ebk_A RWD domain-containing p 94.7 0.1 3.4E-06 32.7 6.0 67 9-79 10-78 (128)
60 1ukx_A GCN2, GCN2 EIF2alpha ki 94.6 0.44 1.5E-05 29.8 8.9 73 7-80 11-86 (137)
61 2daw_A RWD domain containing p 93.4 0.16 5.6E-06 33.0 5.2 24 58-81 76-99 (154)
62 2dax_A Protein C21ORF6; RWD do 92.5 0.088 3E-06 34.0 2.9 24 58-81 74-97 (152)
63 3zqs_A E3 ubiquitin-protein li 88.2 2.2 7.4E-05 28.9 6.8 60 9-82 4-63 (186)
64 3u3c_B Paxillin LD2 peptide; 4 60.7 6.2 0.00021 17.7 1.8 20 7-26 6-25 (26)
65 2bum_A Protocatechuate 3,4-dio 48.7 19 0.00065 24.5 3.6 26 55-80 109-139 (209)
66 2ccv_A Helix pomatia agglutini 37.4 60 0.0021 19.2 4.3 28 56-84 28-55 (101)
67 2rf4_B DNA-directed RNA polyme 30.5 24 0.00083 20.8 1.6 12 7-18 63-74 (87)
68 2bum_B Protocatechuate 3,4-dio 30.1 33 0.0011 23.8 2.5 26 55-80 134-166 (241)
69 2xsu_A Catechol 1,2 dioxygenas 29.5 34 0.0012 24.7 2.5 25 56-80 188-230 (312)
70 3t63_M 3,4-PCD, protocatechuat 29.3 35 0.0012 23.7 2.5 25 56-80 134-165 (238)
71 2azq_A Catechol 1,2-dioxygenas 27.8 37 0.0013 24.5 2.5 25 56-80 184-226 (311)
72 1tmx_A Hydroxyquinol 1,2-dioxy 27.5 39 0.0013 24.2 2.5 26 55-80 183-226 (293)
73 3t63_A 3,4-PCD, protocatechuat 27.1 43 0.0015 22.5 2.6 24 57-80 102-130 (200)
74 3kxt_A Chromatin protein CREN7 26.7 46 0.0016 17.9 2.1 11 61-71 46-56 (56)
75 3ra3_B P2F; coiled coil domain 26.5 43 0.0015 15.1 1.7 13 7-19 8-20 (28)
76 3n9t_A PNPC; phospholipid bind 26.1 43 0.0015 24.0 2.5 25 56-80 181-223 (290)
77 3g9r_A Fusion complex of HIV-1 26.0 52 0.0018 16.5 2.1 14 7-20 29-42 (42)
78 2boy_A 3-chlorocatechol 1,2-di 25.7 45 0.0015 23.4 2.5 25 56-80 154-196 (254)
79 1dmh_A 1,2-CTD, catechol 1,2-d 24.6 46 0.0016 24.0 2.5 25 56-80 187-229 (311)
80 3hhy_A 1,2-CTD, catechol 1,2-d 22.6 48 0.0016 23.6 2.2 25 56-80 183-225 (280)
81 4dac_A Computationally designe 22.6 66 0.0022 14.5 2.4 15 6-20 8-22 (28)
82 2xa6_A KH domain-containing\,R 22.2 79 0.0027 15.9 2.4 15 6-20 26-40 (41)
83 3th1_A Chlorocatechol 1,2-diox 21.7 73 0.0025 22.4 3.0 25 56-80 151-193 (260)
84 4b0y_A Heme-binding protein 2; 20.9 66 0.0023 22.0 2.6 26 49-74 117-142 (227)
85 2bsj_A Chaperone protein SYCT; 20.6 78 0.0027 19.7 2.6 17 48-64 20-36 (133)
86 1nkg_A Rhamnogalacturonase B; 20.1 73 0.0025 24.5 2.9 58 40-100 399-460 (508)
No 1
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=2.1e-32 Score=185.16 Aligned_cols=85 Identities=36% Similarity=0.649 Sum_probs=80.1
Q ss_pred CCchhHHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEec
Q 034263 1 MSGGGIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETC 80 (100)
Q Consensus 1 Ms~~~~a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (100)
|| +.|.+||++|+++|++++++++++.+.+++ |+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|
T Consensus 1 M~--~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~---~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t 75 (165)
T 2ucz_A 1 MS--KTAQKRLLKELQQLIKDSPPGIVAGPKSEN---NIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTP 75 (165)
T ss_dssp -C--HHHHHHHHHHHHHHHHSCCTTEEEEESSSS---CCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS
T ss_pred CC--hHHHHHHHHHHHHHHhCCCCCEEEEECCCC---CccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeC
Confidence 88 789999999999999999999999987643 9999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCC
Q 034263 81 HYCEANFSGH 90 (100)
Q Consensus 81 ~i~HPnv~~~ 90 (100)
++|||||+..
T Consensus 76 ~i~HPNv~~~ 85 (165)
T 2ucz_A 76 SILHPNIYPN 85 (165)
T ss_dssp CCSCTTBCTT
T ss_pred CCccCCCCCC
Confidence 9999999875
No 2
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.6e-32 Score=186.66 Aligned_cols=86 Identities=36% Similarity=0.595 Sum_probs=80.7
Q ss_pred CCchhHHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEec
Q 034263 1 MSGGGIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETC 80 (100)
Q Consensus 1 Ms~~~~a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (100)
|| +.|.+||++|+++|+++++.++++.+.++ |+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|
T Consensus 1 Ms--~~a~~RL~kEl~~l~~~~~~gi~~~p~~~----nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t 74 (169)
T 1ayz_A 1 MS--TPARRRLMRDFKRMKEDAPPGVSASPLPD----NVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLS 74 (169)
T ss_dssp -C--CHHHHHHHHHHHHHHHSCCTTEEEEEETT----EEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS
T ss_pred CC--hHHHHHHHHHHHHHHhCCCCCEEEEecCC----ccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCcccccc
Confidence 78 78999999999999999999999999877 9999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCC
Q 034263 81 HYCEANFSGHSGF 93 (100)
Q Consensus 81 ~i~HPnv~~~~g~ 93 (100)
+||||||+. +|.
T Consensus 75 ~i~HPNI~~-~G~ 86 (169)
T 1ayz_A 75 EMFHPNVYA-NGE 86 (169)
T ss_dssp CCCCTTBCT-TSB
T ss_pred CCccCCCCC-CCe
Confidence 999999987 353
No 3
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=99.98 E-value=3.1e-32 Score=182.21 Aligned_cols=86 Identities=38% Similarity=0.702 Sum_probs=81.5
Q ss_pred CCchhHHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEec
Q 034263 1 MSGGGIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETC 80 (100)
Q Consensus 1 Ms~~~~a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (100)
|| +.|.+||++|+++|+++++.++++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|
T Consensus 1 Ms--~~a~~RL~~E~~~l~~~~~~~i~~~~~~~----~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 74 (152)
T 2aak_A 1 MS--TPARKRLMRDFKRLQQDPPAGISGAPQDN----NIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVS 74 (152)
T ss_dssp CC--CHHHHHHHHHHHHHHHSCCTTEEEEEETT----EEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS
T ss_pred CC--hHHHHHHHHHHHHHHhCCCCCEEEEeCCC----CccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEec
Confidence 88 78999999999999999999999998877 9999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCC
Q 034263 81 HYCEANFSGHSGF 93 (100)
Q Consensus 81 ~i~HPnv~~~~g~ 93 (100)
++|||||+. +|.
T Consensus 75 ~i~HPnv~~-~G~ 86 (152)
T 2aak_A 75 RMFHPNIYA-DGS 86 (152)
T ss_dssp CCCCTTBCT-TSB
T ss_pred CcccCCCCC-CCE
Confidence 999999987 353
No 4
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=99.98 E-value=2.7e-32 Score=185.55 Aligned_cols=87 Identities=30% Similarity=0.456 Sum_probs=81.1
Q ss_pred CCchhHHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEec
Q 034263 1 MSGGGIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETC 80 (100)
Q Consensus 1 Ms~~~~a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (100)
|+ +.|.+||++|+++|++++++++++.+.++ |+++|.++|.||++|||+||+|+++|.||++||++||+|+|.|
T Consensus 20 M~--~~a~~RL~kEl~~l~~~~~~gi~~~p~~~----nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T 93 (169)
T 1yrv_A 20 MH--GRAYLLLHRDFCDLKENNYKGITAKPVSE----DMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFIT 93 (169)
T ss_dssp GG--CHHHHHHHHHHHHHHHHCCTTEEEEECST----TSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESS
T ss_pred cC--hHHHHHHHHHHHHHHhCCCCCEEEEEcCC----ccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecC
Confidence 55 67899999999999999999999999877 9999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCC
Q 034263 81 HYCEANFSGHSGF 93 (100)
Q Consensus 81 ~i~HPnv~~~~g~ 93 (100)
+||||||+..+|.
T Consensus 94 ~i~HPNI~~~~G~ 106 (169)
T 1yrv_A 94 IPFHPNVDPHTGQ 106 (169)
T ss_dssp CCCCTTBCTTTCC
T ss_pred CCccCcccCCCCe
Confidence 9999999655553
No 5
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=99.98 E-value=6.6e-32 Score=181.74 Aligned_cols=82 Identities=23% Similarity=0.404 Sum_probs=78.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccccc
Q 034263 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHYCE 84 (100)
Q Consensus 5 ~~a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (100)
..+.+||++|+++|++++++++++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 12 ~~~~~RL~kEl~~l~~~~~~gi~~~~~~~----~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 87 (158)
T 1zdn_A 12 PHIIRLVYKEVTTLTADPPDGIKVFPNEE----DLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFH 87 (158)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEECSS----CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEECCC----ChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCccc
Confidence 67899999999999999999999998776 99999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 034263 85 ANFSGH 90 (100)
Q Consensus 85 Pnv~~~ 90 (100)
|||+..
T Consensus 88 Pnv~~~ 93 (158)
T 1zdn_A 88 PNVGAN 93 (158)
T ss_dssp TTBCTT
T ss_pred CCCCCC
Confidence 999976
No 6
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=99.98 E-value=5.7e-32 Score=178.53 Aligned_cols=92 Identities=22% Similarity=0.280 Sum_probs=77.9
Q ss_pred CCchhHHHHHHHHHHHHHHHc-CCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEe
Q 034263 1 MSGGGIARGRLTEERKAWRKN-HPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVET 79 (100)
Q Consensus 1 Ms~~~~a~~RL~~El~~l~~~-~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~ 79 (100)
||. ..+.+||++|+++|+++ ++.++++.+.+++ ..|+++|+++|.||++||||||.|+++|.||++||++||+|+|.
T Consensus 2 m~~-~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~-d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 79 (138)
T 1jat_B 2 MSK-VPRNFRLLEELEKGEKGFGPESCSYGLADSD-DITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFI 79 (138)
T ss_dssp -CC-CCHHHHHHHHHHHHHC----CCEEEEESSTT-CTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred cch-HHHHHHHHHHHHHHHhcCCCCCEEEEeCCCC-CCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEE
Confidence 663 45779999999999998 7889999886431 02599999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCc
Q 034263 80 CHYCEANFSGHSGFA 94 (100)
Q Consensus 80 t~i~HPnv~~~~g~~ 94 (100)
|+||||||+..+|..
T Consensus 80 t~i~HPnv~~~~G~i 94 (138)
T 1jat_B 80 SKINLPCVNPTTGEV 94 (138)
T ss_dssp BCCCCTTBCTTTCBB
T ss_pred cccccCCEeCCCCEE
Confidence 999999999886653
No 7
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=99.98 E-value=6.8e-32 Score=181.75 Aligned_cols=87 Identities=28% Similarity=0.357 Sum_probs=80.8
Q ss_pred CCchhHHHHHHHHHHHHHHHc---CCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEE
Q 034263 1 MSGGGIARGRLTEERKAWRKN---HPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWV 77 (100)
Q Consensus 1 Ms~~~~a~~RL~~El~~l~~~---~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~ 77 (100)
|| +.|.+||++|+++|+++ ++.++++.+.++ |+++|+++|.||++|||+||+|+++|.||++||++||+|+
T Consensus 5 Ms--~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~----~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~ 78 (159)
T 2bep_A 5 MA--NIAVQRIKREFKEVLKSEETSKNQIKVDLVDE----NFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVR 78 (159)
T ss_dssp CC--HHHHHHHHHHHHHHHHCHHHHTTSEEEEECSS----SSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEE
T ss_pred ch--HHHHHHHHHHHHHHHhcCCCCCCCEEEEeCCC----chheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEE
Confidence 55 68999999999999984 578999999887 9999999999999999999999999999999999999999
Q ss_pred EecccccCCCCCCCCC
Q 034263 78 ETCHYCEANFSGHSGF 93 (100)
Q Consensus 78 f~t~i~HPnv~~~~g~ 93 (100)
|.|+||||||+..+|.
T Consensus 79 f~t~i~HPni~~~~G~ 94 (159)
T 2bep_A 79 FITKIWHPNISSVTGA 94 (159)
T ss_dssp ESSCCCBTTBCTTTCB
T ss_pred eeCCCCccCCCCCCCE
Confidence 9999999999976563
No 8
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=99.98 E-value=7.2e-32 Score=175.47 Aligned_cols=81 Identities=22% Similarity=0.320 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccc-cc
Q 034263 6 IARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHY-CE 84 (100)
Q Consensus 6 ~a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i-~H 84 (100)
.|.+||++|+++|+++++.++++.+.++ |+++|+++|.||++||||||.|+++|.||++||++||+|+|.|++ ||
T Consensus 6 ~a~~RL~kEl~~l~~~~~~~~~~~~~~~----~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~H 81 (125)
T 2fo3_A 6 NANYRIQKELHNFLNNPPINCTLDVHPN----NIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKH 81 (125)
T ss_dssp ---CHHHHHHHHHHHSCCTTEEEEECTT----CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCB
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeCcc----hhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCC
Confidence 4789999999999999999999998776 999999999999999999999999999999999999999999997 99
Q ss_pred CCCCCC
Q 034263 85 ANFSGH 90 (100)
Q Consensus 85 Pnv~~~ 90 (100)
|||+..
T Consensus 82 Pnv~~~ 87 (125)
T 2fo3_A 82 THVYSN 87 (125)
T ss_dssp TTBCTT
T ss_pred CcCCCC
Confidence 999864
No 9
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=99.97 E-value=5.2e-32 Score=182.06 Aligned_cols=88 Identities=50% Similarity=0.939 Sum_probs=79.6
Q ss_pred CCchhHHHHHHHHHHHHHHHcCCCCeEEEeCCC-CCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEe
Q 034263 1 MSGGGIARGRLTEERKAWRKNHPHGFVAKPETK-DGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVET 79 (100)
Q Consensus 1 Ms~~~~a~~RL~~El~~l~~~~~~~~~~~~~~~-~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~ 79 (100)
|| +.|.+||++|+++|++++++++++.+.++ ||..|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.
T Consensus 1 Ms--~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 78 (157)
T 2gjd_A 1 MS--SLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFP 78 (157)
T ss_dssp ----CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECC
T ss_pred CC--hHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeecc
Confidence 78 78999999999999999999999998642 3445999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCC
Q 034263 80 CHYCEANFSGH 90 (100)
Q Consensus 80 t~i~HPnv~~~ 90 (100)
|++|||||+..
T Consensus 79 t~i~HPnv~~~ 89 (157)
T 2gjd_A 79 AGFYHPNVYPS 89 (157)
T ss_dssp TTCCCTTBCTT
T ss_pred CCCccCCCCCC
Confidence 99999999854
No 10
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=99.97 E-value=6.3e-32 Score=181.18 Aligned_cols=84 Identities=25% Similarity=0.394 Sum_probs=79.7
Q ss_pred CCchhHHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEec
Q 034263 1 MSGGGIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETC 80 (100)
Q Consensus 1 Ms~~~~a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (100)
|| ..+.+||++|+++|+++++.++++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|
T Consensus 2 ~s--~~~~~RL~kEl~~l~~~~~~~i~~~~~~~----~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 75 (154)
T 2c2v_B 2 GS--AGLPRRIIKETQRLLAEPVPGIKAEPDES----NARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMT 75 (154)
T ss_dssp CS--CSCCHHHHHHHHHHHHSCCTTEEEEECSS----CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECS
T ss_pred cc--HHHHHHHHHHHHHHHhCCCCCEEEEECCC----chheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeec
Confidence 45 56889999999999999999999999877 9999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCC
Q 034263 81 HYCEANFSGH 90 (100)
Q Consensus 81 ~i~HPnv~~~ 90 (100)
++|||||+..
T Consensus 76 ~i~HPnv~~~ 85 (154)
T 2c2v_B 76 KIYHPNVDKL 85 (154)
T ss_dssp CCCCTTBCTT
T ss_pred CcccCcCccC
Confidence 9999999864
No 11
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=99.97 E-value=1.6e-31 Score=178.65 Aligned_cols=82 Identities=24% Similarity=0.484 Sum_probs=79.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccccc
Q 034263 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHYCE 84 (100)
Q Consensus 5 ~~a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (100)
+.|.+||++|+++|+++++.++++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 3 ~~a~~RL~kEl~~l~~~~~~~i~~~p~~~----nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 78 (151)
T 4gpr_A 3 AMAMRRIQKELREIQQDPPCNCSAGPVGD----DIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYH 78 (151)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEESSS----CTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEEcCC----CceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCccc
Confidence 67999999999999999999999999887 99999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 034263 85 ANFSGH 90 (100)
Q Consensus 85 Pnv~~~ 90 (100)
|||+..
T Consensus 79 Pnv~~~ 84 (151)
T 4gpr_A 79 PNINKN 84 (151)
T ss_dssp TTBCTT
T ss_pred ceECCC
Confidence 999964
No 12
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=99.97 E-value=1.5e-31 Score=183.81 Aligned_cols=86 Identities=29% Similarity=0.446 Sum_probs=78.3
Q ss_pred CCchhHHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEec
Q 034263 1 MSGGGIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETC 80 (100)
Q Consensus 1 Ms~~~~a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (100)
|++ +.|.+||++|+++|+++++.++++.+.+++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|+|
T Consensus 3 m~~-~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~---nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 78 (183)
T 3rz3_A 3 MGS-PSSQKALLLELKGLQEEPVEGFRVTLVDEG---DLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLT 78 (183)
T ss_dssp --C-CHHHHHHHHHHHHHHHSCCTTEEEEECTTC---CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS
T ss_pred Ccc-hHHHHHHHHHHHHHHhCCCCCEEEEecCcc---chhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecC
Confidence 554 678999999999999999999999954443 9999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCC
Q 034263 81 HYCEANFSGH 90 (100)
Q Consensus 81 ~i~HPnv~~~ 90 (100)
++|||||+..
T Consensus 79 ~i~HPnV~~~ 88 (183)
T 3rz3_A 79 KMWHPNIYET 88 (183)
T ss_dssp CCCCTTBCTT
T ss_pred CCccCCCCCC
Confidence 9999999873
No 13
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=99.97 E-value=1.9e-31 Score=180.26 Aligned_cols=83 Identities=40% Similarity=0.615 Sum_probs=78.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccccc
Q 034263 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHYCE 84 (100)
Q Consensus 5 ~~a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (100)
+.|.+||++|+++|+++++.++++.+.+++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 2 ~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~---nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (164)
T 3h8k_A 2 GTALKRLMAEYKQLTLNPPEGIVAGPMNEE---NFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFH 78 (164)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEEESSTT---CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEECCCC---CccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCcc
Confidence 578999999999999999999999988765 99999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 034263 85 ANFSGH 90 (100)
Q Consensus 85 Pnv~~~ 90 (100)
|||+..
T Consensus 79 PNV~~~ 84 (164)
T 3h8k_A 79 PNIYPD 84 (164)
T ss_dssp TTBCTT
T ss_pred CCCCCC
Confidence 999854
No 14
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=99.97 E-value=8.6e-32 Score=182.16 Aligned_cols=86 Identities=47% Similarity=0.892 Sum_probs=80.5
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEEeCCC-CCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecccc
Q 034263 5 GIARGRLTEERKAWRKNHPHGFVAKPETK-DGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHYC 83 (100)
Q Consensus 5 ~~a~~RL~~El~~l~~~~~~~~~~~~~~~-~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 83 (100)
..|.+||+||+++|++++++++++.+.++ ||..|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||
T Consensus 9 ~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i~ 88 (163)
T 3rcz_B 9 SLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLF 88 (163)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCCc
Confidence 57999999999999999999999998754 56669999999999999999999999999999999999999999999999
Q ss_pred cCCCCCC
Q 034263 84 EANFSGH 90 (100)
Q Consensus 84 HPnv~~~ 90 (100)
||||+..
T Consensus 89 HPnV~~~ 95 (163)
T 3rcz_B 89 HPNVYPS 95 (163)
T ss_dssp STTBCTT
T ss_pred cCCCCCC
Confidence 9999853
No 15
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=99.97 E-value=1.6e-31 Score=187.86 Aligned_cols=85 Identities=29% Similarity=0.458 Sum_probs=80.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccccc
Q 034263 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHYCE 84 (100)
Q Consensus 5 ~~a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (100)
+.+.+||++|+++|+++++.++++.+.++ |+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+|||
T Consensus 22 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~----nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~H 97 (216)
T 2pwq_A 22 SKELLRLQKELKDIENENVQEIDAHIKDS----NFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWH 97 (216)
T ss_dssp CHHHHHHHHHHHHHHHSCTTTEEEEECSS----CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEcCC----ccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcC
Confidence 57899999999999999999999999887 99999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCC
Q 034263 85 ANFSGHSGF 93 (100)
Q Consensus 85 Pnv~~~~g~ 93 (100)
|||+..+|.
T Consensus 98 PNI~~~~G~ 106 (216)
T 2pwq_A 98 PNISSQTGA 106 (216)
T ss_dssp TTBCTTTCB
T ss_pred CCCcCCCCE
Confidence 999976563
No 16
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=99.97 E-value=1.4e-31 Score=179.80 Aligned_cols=82 Identities=29% Similarity=0.405 Sum_probs=78.5
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccccc
Q 034263 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHYCE 84 (100)
Q Consensus 5 ~~a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (100)
+.+.+||++|+++|+++++.++++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 8 ~~~~~RL~kEl~~l~~~~~~~i~~~p~~~----~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 83 (156)
T 2e2c_A 8 HSVSKRLQQELRTLLMSGDPGITAFPDGD----NLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWH 83 (156)
T ss_dssp CCHHHHHHHHHHHHHHHCCTTEEEEESSS----CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEECCC----CccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCccc
Confidence 46899999999999999999999998877 99999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 034263 85 ANFSGH 90 (100)
Q Consensus 85 Pnv~~~ 90 (100)
|||+..
T Consensus 84 Pnv~~~ 89 (156)
T 2e2c_A 84 PNVDQS 89 (156)
T ss_dssp TTBCTT
T ss_pred CCCccC
Confidence 999974
No 17
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=99.97 E-value=8.2e-32 Score=179.63 Aligned_cols=84 Identities=23% Similarity=0.347 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecccccCC
Q 034263 7 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHYCEAN 86 (100)
Q Consensus 7 a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 86 (100)
+.+||++|+++|+++++.++++.+.+++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~---~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 78 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSES---DIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPN 78 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSS---CSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCC---CceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCC
Confidence 4799999999999999999999998764 8999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCC
Q 034263 87 FSGHSGF 93 (100)
Q Consensus 87 v~~~~g~ 93 (100)
|+..+|.
T Consensus 79 i~~~~G~ 85 (149)
T 1fxt_A 79 ISSVTGA 85 (149)
T ss_dssp BCSSSCC
T ss_pred CcCCCCe
Confidence 9985553
No 18
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=99.97 E-value=1.4e-31 Score=186.14 Aligned_cols=87 Identities=28% Similarity=0.357 Sum_probs=79.7
Q ss_pred CCchhHHHHHHHHHHHHHHHc---CCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEE
Q 034263 1 MSGGGIARGRLTEERKAWRKN---HPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWV 77 (100)
Q Consensus 1 Ms~~~~a~~RL~~El~~l~~~---~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~ 77 (100)
|| +.|.+||++|+++|+++ ++.++++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+
T Consensus 2 Ms--~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~----nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~ 75 (201)
T 3k9o_A 2 MA--NIAVQRIKREFKEVLKSEETSKNQIKVDLVDE----NFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVR 75 (201)
T ss_dssp ----CTTHHHHHHHHHHHHTCHHHHTTSEEEEECST----TSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEE
T ss_pred Cc--HHHHHHHHHHHHHHHhCCCCCCCCEEEEECCC----CccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccc
Confidence 77 78999999999999886 368999999887 9999999999999999999999999999999999999999
Q ss_pred EecccccCCCCCCCCC
Q 034263 78 ETCHYCEANFSGHSGF 93 (100)
Q Consensus 78 f~t~i~HPnv~~~~g~ 93 (100)
|.|+||||||+..+|.
T Consensus 76 f~t~i~HPnv~~~~G~ 91 (201)
T 3k9o_A 76 FITKIWHPNISSVTGA 91 (201)
T ss_dssp ESSCCCBTTBCTTTCB
T ss_pred cccCcccCCCcCCCCe
Confidence 9999999999976564
No 19
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=99.97 E-value=2.5e-31 Score=177.43 Aligned_cols=82 Identities=30% Similarity=0.531 Sum_probs=78.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccccc
Q 034263 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHYCE 84 (100)
Q Consensus 5 ~~a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (100)
.++.+||++|+++|++++++++++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||
T Consensus 3 ~~~~~RL~kEl~~l~~~~~~~~~~~~~~~----~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (150)
T 1z2u_A 3 HMALKRIQKELQDLGRDPPAQCSAGPVGD----DLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYH 78 (150)
T ss_dssp CHHHHHHHHHHHHHHHSCCSSEEEEEETT----EEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEECCC----cceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCccc
Confidence 57899999999999999999999999877 99999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 034263 85 ANFSGH 90 (100)
Q Consensus 85 Pnv~~~ 90 (100)
|||+..
T Consensus 79 Pnv~~~ 84 (150)
T 1z2u_A 79 PNINSN 84 (150)
T ss_dssp TTBCTT
T ss_pred CcCCCC
Confidence 999864
No 20
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.97 E-value=5.1e-31 Score=179.09 Aligned_cols=82 Identities=22% Similarity=0.305 Sum_probs=78.5
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccccc
Q 034263 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHYCE 84 (100)
Q Consensus 5 ~~a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (100)
..+.+||++|+++|+++++.++++.+.++ |+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+|||
T Consensus 3 ~~~~~RL~kEl~~l~~~~~~gi~~~~~~~----~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (169)
T 1yh2_A 3 MQRASRLKRELHMLATEPPPGITCWQDKD----QMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYH 78 (169)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEESSS----CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeCCC----chheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCcc
Confidence 56899999999999999999999998877 99999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 034263 85 ANFSGH 90 (100)
Q Consensus 85 Pnv~~~ 90 (100)
|||+..
T Consensus 79 PNv~~~ 84 (169)
T 1yh2_A 79 PNIDSA 84 (169)
T ss_dssp TTBCTT
T ss_pred ccCCcC
Confidence 999954
No 21
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=99.97 E-value=5.4e-31 Score=173.61 Aligned_cols=82 Identities=22% Similarity=0.338 Sum_probs=77.6
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccc-c
Q 034263 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHY-C 83 (100)
Q Consensus 5 ~~a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i-~ 83 (100)
+.|.+||++|+++|+++++.++++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ |
T Consensus 19 ~~~~~RL~kEl~~l~~~~~~~~~~~~~~~----nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~ 94 (136)
T 2h2y_A 19 GNANYRIQKELNNFLKNPPINCTIDVHPS----NIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPK 94 (136)
T ss_dssp TSHHHHHHHHHHHHHHSCCTTEEEEECTT----CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCC
T ss_pred hHHHHHHHHHHHHHHhCCCCCeEEEeccc----cccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCC
Confidence 35889999999999999999999998776 999999999999999999999999999999999999999999997 9
Q ss_pred cCCCCCC
Q 034263 84 EANFSGH 90 (100)
Q Consensus 84 HPnv~~~ 90 (100)
||||+..
T Consensus 95 HPnv~~~ 101 (136)
T 2h2y_A 95 HTHVYSN 101 (136)
T ss_dssp CTTBCTT
T ss_pred CCcCCCC
Confidence 9999864
No 22
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=99.97 E-value=2.4e-31 Score=179.46 Aligned_cols=88 Identities=57% Similarity=1.026 Sum_probs=80.1
Q ss_pred CCchhHHHHHHHHHHHHHHHcCCCCeEEEeCC-CCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEe
Q 034263 1 MSGGGIARGRLTEERKAWRKNHPHGFVAKPET-KDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVET 79 (100)
Q Consensus 1 Ms~~~~a~~RL~~El~~l~~~~~~~~~~~~~~-~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~ 79 (100)
|+ +.+.+||++|+++|++++++++.+.+.. ++|.+|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.
T Consensus 4 M~--~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 81 (161)
T 2grr_A 4 MS--GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFE 81 (161)
T ss_dssp CC--HHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES
T ss_pred cc--HHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEe
Confidence 66 7899999999999999999999998863 22334999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCC
Q 034263 80 CHYCEANFSGH 90 (100)
Q Consensus 80 t~i~HPnv~~~ 90 (100)
|++|||||+..
T Consensus 82 t~i~HPnv~~~ 92 (161)
T 2grr_A 82 PPLFHPNVYPS 92 (161)
T ss_dssp SCCCSTTBCTT
T ss_pred cCcccCCCCCC
Confidence 99999999953
No 23
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=99.97 E-value=5.5e-31 Score=178.63 Aligned_cols=82 Identities=29% Similarity=0.492 Sum_probs=78.6
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccccc
Q 034263 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHYCE 84 (100)
Q Consensus 5 ~~a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (100)
+.+.+||++|+++|+++++.++++.+.++ |+++|.++|.||++|||+||+|+++|.||++||++||+|+|.|+|||
T Consensus 20 ~~~~~RL~kEl~~l~~~~~~gi~~~~~~~----nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~H 95 (166)
T 2ayv_A 20 QGALKRINKELNDLSKDPPTNCSAGPVGD----DMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYH 95 (166)
T ss_dssp TTHHHHHHHHHHHHHHSCCTTEEEEECSS----CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCB
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCC----CcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcC
Confidence 56899999999999999999999999777 99999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 034263 85 ANFSGH 90 (100)
Q Consensus 85 Pnv~~~ 90 (100)
|||+..
T Consensus 96 PNI~~~ 101 (166)
T 2ayv_A 96 PNINSQ 101 (166)
T ss_dssp TTBCTT
T ss_pred CcCCCC
Confidence 999864
No 24
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=99.97 E-value=2.2e-31 Score=182.57 Aligned_cols=82 Identities=28% Similarity=0.393 Sum_probs=78.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccccc
Q 034263 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHYCE 84 (100)
Q Consensus 5 ~~a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (100)
+.+.+||++|+++|+++++.+|++.+.++ |+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+|||
T Consensus 29 ~~~~~RL~kEl~~l~~~~~~gi~~~p~~~----nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~H 104 (179)
T 1i7k_A 29 GPVGKRLQQELMTLMMSGDKGISAFPESD----NLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYH 104 (179)
T ss_dssp -CHHHHHHHHHHHHHHHCCTTEEEEEETT----EEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCS
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEEcCC----cccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCcc
Confidence 56889999999999999999999999877 99999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 034263 85 ANFSGH 90 (100)
Q Consensus 85 Pnv~~~ 90 (100)
|||+..
T Consensus 105 PNV~~~ 110 (179)
T 1i7k_A 105 PNVDTQ 110 (179)
T ss_dssp TTBCTT
T ss_pred CccccC
Confidence 999974
No 25
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=99.97 E-value=4.8e-31 Score=179.76 Aligned_cols=83 Identities=30% Similarity=0.442 Sum_probs=78.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccccc
Q 034263 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHYCE 84 (100)
Q Consensus 5 ~~a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (100)
+.+.+||++|+++|+++++.++++.+.+++ |+++|.++|.||++||||||+|+++|.||++||++||+|+|.|+|||
T Consensus 16 ~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~---nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~H 92 (172)
T 2awf_A 16 PRGSLLLRRQLAELNKNPVEGFSAGLIDDN---DLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWH 92 (172)
T ss_dssp CTTHHHHHHHHHHHHHSCCTTEEEEESSTT---CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCC
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEECCCc---cccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCcc
Confidence 578999999999999999999999987643 99999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 034263 85 ANFSGH 90 (100)
Q Consensus 85 Pnv~~~ 90 (100)
|||+..
T Consensus 93 PNV~~~ 98 (172)
T 2awf_A 93 PNVDKN 98 (172)
T ss_dssp TTBCTT
T ss_pred CCCCCC
Confidence 999875
No 26
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=99.97 E-value=6.4e-31 Score=178.14 Aligned_cols=82 Identities=29% Similarity=0.536 Sum_probs=78.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccccc
Q 034263 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHYCE 84 (100)
Q Consensus 5 ~~a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (100)
+.+.+||++|+++|+++++.++++.+.++ |+++|.++|.||++|||+||.|+++|.||++||++||+|+|.|+|||
T Consensus 18 ~~~~~RL~kEl~~l~~~~~~gi~~~p~~~----nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~H 93 (165)
T 2c4o_A 18 SMALKRIHKELNDLARDPPAQCSAGPVGD----DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYH 93 (165)
T ss_dssp HHHHHHHHHHHHHHHSSCCTTEEEEESSS----CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCB
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCC----CcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcC
Confidence 56899999999999999999999999877 99999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 034263 85 ANFSGH 90 (100)
Q Consensus 85 Pnv~~~ 90 (100)
|||+..
T Consensus 94 PnV~~~ 99 (165)
T 2c4o_A 94 PNINSN 99 (165)
T ss_dssp TTBCTT
T ss_pred CcCCCC
Confidence 999874
No 27
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=99.97 E-value=2.2e-31 Score=175.65 Aligned_cols=79 Identities=25% Similarity=0.416 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHHcCCCCeEEE--eCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecccc--
Q 034263 8 RGRLTEERKAWRKNHPHGFVAK--PETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHYC-- 83 (100)
Q Consensus 8 ~~RL~~El~~l~~~~~~~~~~~--~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~-- 83 (100)
.+||++|+++|++++++++++. +.++ |+++|+++|.||++||||||.|+++|.||++||++||+|+|.|++|
T Consensus 24 ~~RL~kEl~~l~~~~~~gi~v~~~~~~~----nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~ 99 (136)
T 2a7l_A 24 QKRLQKELLALQNDPPPGMTLNEKSVQN----SITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPV 99 (136)
T ss_dssp CHHHHHHHHHHHHSCCTTCCCCTTCCCC----SCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEeeCcc----ccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCC
Confidence 4999999999999999999865 5555 9999999999999999999999999999999999999999999999
Q ss_pred cCCCCCC
Q 034263 84 EANFSGH 90 (100)
Q Consensus 84 HPnv~~~ 90 (100)
||||+..
T Consensus 100 HPNV~~~ 106 (136)
T 2a7l_A 100 HPHVYSN 106 (136)
T ss_dssp BTTBCTT
T ss_pred CccCCCC
Confidence 9999864
No 28
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=99.97 E-value=3e-31 Score=177.96 Aligned_cols=84 Identities=26% Similarity=0.437 Sum_probs=78.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccccc
Q 034263 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHYCE 84 (100)
Q Consensus 5 ~~a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (100)
+.+.+||++|+++|++++++++++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 4 ~~~~~RL~kE~~~l~~~~~~~i~~~~~~~----~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 79 (155)
T 1jat_A 4 ASLPKRIIKETEKLVSDPVPGITAEPHDD----NLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYH 79 (155)
T ss_dssp CSCCHHHHHHHHHHHHSCCTTEEEEEETT----EEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCB
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEECCC----chhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeeccccc
Confidence 45789999999999999999999999877 99999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCC
Q 034263 85 ANFSGHSGF 93 (100)
Q Consensus 85 Pnv~~~~g~ 93 (100)
|||+. +|.
T Consensus 80 Pnv~~-~G~ 87 (155)
T 1jat_A 80 PNIDR-LGR 87 (155)
T ss_dssp TTBCT-TCC
T ss_pred CCCCC-CCE
Confidence 99994 353
No 29
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=99.97 E-value=4.7e-31 Score=176.01 Aligned_cols=80 Identities=30% Similarity=0.536 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecccccCC
Q 034263 7 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHYCEAN 86 (100)
Q Consensus 7 a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 86 (100)
+.+||++|+++|+++++.++++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 2 ~~~RL~kEl~~l~~~~~~~i~~~~~~~----~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 77 (149)
T 2r0j_A 2 IPRRITKETQNLANEPPPGIMAVPVPE----NYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPN 77 (149)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEEETT----EEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCC----cccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCC
Confidence 358999999999999999999999877 9999999999999999999999999999999999999999999999999
Q ss_pred CCCC
Q 034263 87 FSGH 90 (100)
Q Consensus 87 v~~~ 90 (100)
|+..
T Consensus 78 v~~~ 81 (149)
T 2r0j_A 78 IDKL 81 (149)
T ss_dssp BCTT
T ss_pred CCCC
Confidence 9876
No 30
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=99.97 E-value=1.9e-30 Score=175.20 Aligned_cols=86 Identities=22% Similarity=0.263 Sum_probs=76.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCC-eEEEeCCCCCCCC--cceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecc
Q 034263 5 GIARGRLTEERKAWRKNHPHG-FVAKPETKDGSVN--LMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCH 81 (100)
Q Consensus 5 ~~a~~RL~~El~~l~~~~~~~-~~~~~~~~~g~~~--l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~ 81 (100)
..+.+||++|+++|+++++++ +++.+.+++ | +++|+++|.||++||||||+|+++|.||++||++||+|+|.|+
T Consensus 24 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~---d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~ 100 (160)
T 2a4d_A 24 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDE---DMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTK 100 (160)
T ss_dssp HHHHHHHHHHHHHHHSCCTTSSEEEEESSTT---CTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred chHHHHHHHHHHHHHhCCCCCcEEEEecCCc---cccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecC
Confidence 357899999999999998888 777775442 4 8999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCC
Q 034263 82 YCEANFSGHSGF 93 (100)
Q Consensus 82 i~HPnv~~~~g~ 93 (100)
||||||+..+|.
T Consensus 101 i~HPNV~~~~G~ 112 (160)
T 2a4d_A 101 INMNGVNSSNGV 112 (160)
T ss_dssp CCCTTBCTTTCB
T ss_pred ceeCCEECCCCE
Confidence 999999965453
No 31
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=99.97 E-value=1.7e-30 Score=186.16 Aligned_cols=87 Identities=28% Similarity=0.357 Sum_probs=80.8
Q ss_pred CCchhHHHHHHHHHHHHHHHc---CCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEE
Q 034263 1 MSGGGIARGRLTEERKAWRKN---HPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWV 77 (100)
Q Consensus 1 Ms~~~~a~~RL~~El~~l~~~---~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~ 77 (100)
|+ +.|.+||++|+++|+++ ++.++++.+.++ |+++|+++|.||++|||+||+|+|+|.||++||++||+|+
T Consensus 54 Ms--~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~d----nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~ 127 (253)
T 3e46_A 54 MA--NIAVQRIKREFKEVLKSEETSKNQIKVDLVDE----NFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVR 127 (253)
T ss_dssp CC--HHHHHHHHHHHHHHHHCHHHHTTSEEEEECST----TSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEE
T ss_pred cc--HHHHHHHHHHHHHHHhCCCCCCCCEEEEECCC----cccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeee
Confidence 55 68999999999999886 478999999887 9999999999999999999999999999999999999999
Q ss_pred EecccccCCCCCCCCC
Q 034263 78 ETCHYCEANFSGHSGF 93 (100)
Q Consensus 78 f~t~i~HPnv~~~~g~ 93 (100)
|.|+||||||+..+|.
T Consensus 128 F~T~i~HPNV~~~~G~ 143 (253)
T 3e46_A 128 FITKIWHPNISSVTGA 143 (253)
T ss_dssp ESSCCCBTTBCTTTCB
T ss_pred ecCCCccCCccCCCCe
Confidence 9999999999976563
No 32
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=99.97 E-value=1.3e-30 Score=180.59 Aligned_cols=84 Identities=30% Similarity=0.498 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHHHcCC-------------CCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCC
Q 034263 6 IARGRLTEERKAWRKNHP-------------HGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSK 72 (100)
Q Consensus 6 ~a~~RL~~El~~l~~~~~-------------~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~ 72 (100)
.+.+||++|+++|+++++ .++++.+.++ |+++|+++|.||++|||+||+|+|+|.||++||++
T Consensus 32 ~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~----nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~ 107 (193)
T 2f4z_A 32 REQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGG----DIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYN 107 (193)
T ss_dssp CHHHHHHHHHHHHHHC----------------CEEEEEETT----EEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTS
T ss_pred HHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCC----CcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCC
Confidence 578999999999999876 7999999887 99999999999999999999999999999999999
Q ss_pred CCeEEEecccccCCCCCCCCC
Q 034263 73 PPKWVETCHYCEANFSGHSGF 93 (100)
Q Consensus 73 pP~v~f~t~i~HPnv~~~~g~ 93 (100)
||+|+|+|+||||||+..+|.
T Consensus 108 PP~V~F~T~i~HPNI~~~~G~ 128 (193)
T 2f4z_A 108 PPKMKFVTKIWHPNISSQTGA 128 (193)
T ss_dssp CCEEEESSCCCBTTBCTTTCB
T ss_pred CCeEEEecCCccCCCcCCCCE
Confidence 999999999999999976553
No 33
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=99.97 E-value=4.2e-30 Score=178.11 Aligned_cols=82 Identities=28% Similarity=0.506 Sum_probs=78.4
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccccc
Q 034263 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHYCE 84 (100)
Q Consensus 5 ~~a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (100)
+.+.+||++|+++|++++++++++.+.++ |+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+|||
T Consensus 47 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~----nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~H 122 (194)
T 3bzh_A 47 STSAKRIQKELADITLDPPPNCSAGPKGD----NIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYH 122 (194)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEESSS----CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCB
T ss_pred cHHHHHHHHHHHHHHhCCCCCceeecccC----ccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCcc
Confidence 45889999999999999999999999877 99999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 034263 85 ANFSGH 90 (100)
Q Consensus 85 Pnv~~~ 90 (100)
|||+..
T Consensus 123 PNV~~~ 128 (194)
T 3bzh_A 123 CNINSQ 128 (194)
T ss_dssp TTBCTT
T ss_pred ceECCC
Confidence 999964
No 34
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=99.97 E-value=3.7e-30 Score=173.10 Aligned_cols=85 Identities=25% Similarity=0.394 Sum_probs=76.9
Q ss_pred hHHHHHHHHHHHHHHHc-CCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecccc
Q 034263 5 GIARGRLTEERKAWRKN-HPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHYC 83 (100)
Q Consensus 5 ~~a~~RL~~El~~l~~~-~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 83 (100)
..+.+||++|+++|+++ ++.++++.+.+++ ..|+++|+++|.||++||||||+|+++|.||++||++||+|+|.|+||
T Consensus 20 ~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~-d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~ 98 (156)
T 2q0v_A 20 VPRSFRLLDELERGQKGNVSEGVSFGLESAD-DITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIE 98 (156)
T ss_dssp CCHHHHHHHHHHHHHCC-CCTTEEEEESSTT-CTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCC
T ss_pred chHHHHHHHHHHHHHhCCCCCCeEEEECCCc-cccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccc
Confidence 35889999999999998 7889999886431 026999999999999999999999999999999999999999999999
Q ss_pred cCCCCCC
Q 034263 84 EANFSGH 90 (100)
Q Consensus 84 HPnv~~~ 90 (100)
||||+..
T Consensus 99 HPNV~~~ 105 (156)
T 2q0v_A 99 MSCVDNC 105 (156)
T ss_dssp CTTBCTT
T ss_pred cCCCccC
Confidence 9999976
No 35
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=99.97 E-value=3.2e-30 Score=175.67 Aligned_cols=86 Identities=27% Similarity=0.418 Sum_probs=75.4
Q ss_pred CCchhHHHHHHHHHHHHHHH-c-C------CC---CeEEEe-CCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCC
Q 034263 1 MSGGGIARGRLTEERKAWRK-N-H------PH---GFVAKP-ETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSED 68 (100)
Q Consensus 1 Ms~~~~a~~RL~~El~~l~~-~-~------~~---~~~~~~-~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~ 68 (100)
|| +.+.+||++|+++|++ . + +. ++.+.+ .++ |+++|+++|.||++|||+||.|+|+|.||++
T Consensus 3 Ms--~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~----nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~ 76 (172)
T 2y9m_A 3 MA--DTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDET----DLSKWEAIISGPSDTPYENHQFRILIEVPSS 76 (172)
T ss_dssp -C--HHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTT----CTTEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred Cc--HHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCC----chhEEEEEEECCCCCcccCCEEEEEEECCCc
Confidence 56 7899999999999998 5 3 33 466777 444 9999999999999999999999999999999
Q ss_pred CCCCCCeEEEec-ccccCCCCCCCC
Q 034263 69 YPSKPPKWVETC-HYCEANFSGHSG 92 (100)
Q Consensus 69 YP~~pP~v~f~t-~i~HPnv~~~~g 92 (100)
||++||+|+|.| +||||||+..+|
T Consensus 77 YP~~PP~v~f~t~~i~HPni~~~~G 101 (172)
T 2y9m_A 77 YPMNPPKISFMQNNILHCNVKSATG 101 (172)
T ss_dssp TTTSCCEEEECTTSCCCTTEETTTT
T ss_pred CCCCCCEEEEeeCCeecCCCcCCCC
Confidence 999999999999 999999975555
No 36
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=99.96 E-value=5.6e-31 Score=184.94 Aligned_cols=85 Identities=22% Similarity=0.336 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecccccC
Q 034263 6 IARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHYCEA 85 (100)
Q Consensus 6 ~a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 85 (100)
.+.+||++|+++|++++++++++.+.+++ ++++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~---~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HP 78 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSES---DIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHP 78 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSSS---SCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCS
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCCc---cccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccC
Confidence 46899999999999999999999988763 677999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCC
Q 034263 86 NFSGHSGF 93 (100)
Q Consensus 86 nv~~~~g~ 93 (100)
||+..+|.
T Consensus 79 NI~~~~G~ 86 (215)
T 1tte_A 79 NISSVTGA 86 (215)
T ss_dssp SSCSSSSC
T ss_pred cCcCCCCE
Confidence 99985553
No 37
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=99.96 E-value=5.9e-30 Score=171.57 Aligned_cols=80 Identities=21% Similarity=0.392 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCeEE-EeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccccc
Q 034263 6 IARGRLTEERKAWRKNHPHGFVA-KPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHYCE 84 (100)
Q Consensus 6 ~a~~RL~~El~~l~~~~~~~~~~-~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (100)
.+.+||++|+++|+++++.++++ .+.++ |+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~----~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSSDDA----NVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYH 78 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEECSS----CTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEecCCC----chheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCcc
Confidence 37899999999999999999999 66665 9999999999 999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 034263 85 ANFSGH 90 (100)
Q Consensus 85 Pnv~~~ 90 (100)
|||+..
T Consensus 79 PnV~~~ 84 (155)
T 1wzv_A 79 PNVDEN 84 (155)
T ss_dssp TTBCTT
T ss_pred CcCCCC
Confidence 999873
No 38
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=99.96 E-value=2.5e-30 Score=175.34 Aligned_cols=84 Identities=19% Similarity=0.359 Sum_probs=78.8
Q ss_pred CCchhHHHHHHHHHHHHHHHcC------------CCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCC--CCEEEEEEEcC
Q 034263 1 MSGGGIARGRLTEERKAWRKNH------------PHGFVAKPETKDGSVNLMIWECIIPGKTGTDWE--GGYFPLTLYFS 66 (100)
Q Consensus 1 Ms~~~~a~~RL~~El~~l~~~~------------~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~--gg~f~~~i~fp 66 (100)
|| +.+.+||++|+++|++++ +.++.+.+.++ |+++|+++|.||++|||+ ||.|+++|.||
T Consensus 5 Ms--~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~----nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp 78 (167)
T 4ds2_A 5 MK--NISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTD----TIYNWILKVKAPADSVYGGAGNTYQLSVLFS 78 (167)
T ss_dssp CC--CCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEES----STTEEEEEEECCTTSGGGTTCCEEEEEEECC
T ss_pred cc--HHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCC----cccEEEEEEECCCCCCccCCCCEEEEEEECC
Confidence 77 678999999999999876 77899988887 999999999999999999 99999999999
Q ss_pred CCCCCCCCeEEEecccccCCCCCC
Q 034263 67 EDYPSKPPKWVETCHYCEANFSGH 90 (100)
Q Consensus 67 ~~YP~~pP~v~f~t~i~HPnv~~~ 90 (100)
++||++||+|+|.|++|||||+..
T Consensus 79 ~~YP~~pP~v~f~t~i~HPnv~~~ 102 (167)
T 4ds2_A 79 DDYPHEPPTVRFVTPVYSPLVTGE 102 (167)
T ss_dssp TTTTTSCCEEEESSCCCCSSCCTT
T ss_pred CCCCCCCCEEEEeCCcccccCCCC
Confidence 999999999999999999999853
No 39
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=99.96 E-value=9.2e-30 Score=173.26 Aligned_cols=87 Identities=22% Similarity=0.274 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHHHcCCCC-eEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccccc
Q 034263 6 IARGRLTEERKAWRKNHPHG-FVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHYCE 84 (100)
Q Consensus 6 ~a~~RL~~El~~l~~~~~~~-~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (100)
.+.+||++|+++|+++++++ +++.+.+++ ..|+++|+++|.||++||||||+|+++|.||++||++||+|+|.|+|||
T Consensus 35 p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~-d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~H 113 (170)
T 2hlw_A 35 PRNFRLLEELEEGQKGVGDGTVSWGLEDDE-DMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINM 113 (170)
T ss_dssp CHHHHHHHHHHHHHHCCGGGCEEEEESSTT-CSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCC
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEecCcc-cccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEeccccc
Confidence 47899999999999998888 677764442 0139999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCC
Q 034263 85 ANFSGHSGF 93 (100)
Q Consensus 85 Pnv~~~~g~ 93 (100)
|||+..+|.
T Consensus 114 PNV~~~~G~ 122 (170)
T 2hlw_A 114 NGVNSSNGV 122 (170)
T ss_dssp SSBCSSSCB
T ss_pred CCEeCCCCE
Confidence 999865454
No 40
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=99.96 E-value=8.9e-30 Score=174.57 Aligned_cols=85 Identities=20% Similarity=0.246 Sum_probs=73.7
Q ss_pred CCchhHHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEec
Q 034263 1 MSGGGIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETC 80 (100)
Q Consensus 1 Ms~~~~a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (100)
|++.+.|.+||++|+++|++ .++++.+. + |+++|.++|.||++|||+||+|+++|.||++||++||+|+|.|
T Consensus 20 ms~~~~a~~RL~kEl~~l~~---~g~~v~~~-d----dl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t 91 (179)
T 2z5d_A 20 MSSPSPGKRRMDTDVIKLIE---SKHEVTIL-G----GLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMN 91 (179)
T ss_dssp ---CCHHHHHHHHHHHHHHH---SSSCEEEE-E----ETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS
T ss_pred CCCchHHHHHHHHHHHhcCc---CCCEEEEC-C----CCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEec
Confidence 55334689999999999985 46777776 4 7899999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCC
Q 034263 81 HYCEANFSGHSGF 93 (100)
Q Consensus 81 ~i~HPnv~~~~g~ 93 (100)
+||||||+..+|.
T Consensus 92 ~i~HPNV~~~~G~ 104 (179)
T 2z5d_A 92 KIFHPNIDEASGT 104 (179)
T ss_dssp CCCBTTBCTTTCB
T ss_pred CCccCcCCCCCCe
Confidence 9999999885553
No 41
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=99.96 E-value=1.6e-29 Score=171.25 Aligned_cols=82 Identities=16% Similarity=0.214 Sum_probs=76.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccccc
Q 034263 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHYCE 84 (100)
Q Consensus 5 ~~a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (100)
+.+.+||++|+++|+++++.++++.+.++| |++.|.++| ||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 13 s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~---~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 88 (167)
T 3fn1_B 13 SVRDKLLVKEVAELEANLPCTCKVHFPDPN---KLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWH 88 (167)
T ss_dssp CHHHHHHHHHHHHHGGGSCTTEEEECSSSS---CTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCC
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeCCCC---cceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCccc
Confidence 468999999999999999999999876554 899999998 8999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 034263 85 ANFSGH 90 (100)
Q Consensus 85 Pnv~~~ 90 (100)
|||+..
T Consensus 89 Pnv~~~ 94 (167)
T 3fn1_B 89 PNITET 94 (167)
T ss_dssp SSBCTT
T ss_pred CCCCCC
Confidence 999853
No 42
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=99.96 E-value=4.1e-30 Score=172.11 Aligned_cols=81 Identities=19% Similarity=0.284 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecccccC
Q 034263 6 IARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHYCEA 85 (100)
Q Consensus 6 ~a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 85 (100)
.|.+||++|+++|+++ ++++.+.++ |+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||
T Consensus 2 sa~~Rl~kEl~~l~~~---~~~v~~~~~----~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 74 (152)
T 2onu_A 2 TSLTRKQCDFTKLIMA---GYDLELNNG----STQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHP 74 (152)
T ss_dssp -CCCHHHHTHHHHHHH---TCCEEEETT----EEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCT
T ss_pred hHHHHHHHHHHhcCcC---CCEEEEccC----ccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccC
Confidence 3679999999999875 677888776 999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCC
Q 034263 86 NFSGHSGF 93 (100)
Q Consensus 86 nv~~~~g~ 93 (100)
||+..+|.
T Consensus 75 ni~~~~G~ 82 (152)
T 2onu_A 75 NVDEASGS 82 (152)
T ss_dssp TBCTTTCB
T ss_pred cCcCcCCe
Confidence 99976553
No 43
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=99.96 E-value=1.9e-29 Score=168.93 Aligned_cols=80 Identities=26% Similarity=0.450 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecccccCC
Q 034263 7 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHYCEAN 86 (100)
Q Consensus 7 a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 86 (100)
|.+||++|+++|++++++++.+.+.+++ |+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 3 a~~RL~kEl~~l~~~~~~~~~~~~~~~~---~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 78 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKNFRNIQVDEA---NLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPN 78 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSSCEEECSSCS---SSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeeCCCC---chheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCcccc
Confidence 6799999999999999999987664443 9999999998 99999999999999999999999999999999999999
Q ss_pred CCCC
Q 034263 87 FSGH 90 (100)
Q Consensus 87 v~~~ 90 (100)
|+..
T Consensus 79 v~~~ 82 (154)
T 1c4z_D 79 IDEK 82 (154)
T ss_dssp BCTT
T ss_pred CCCC
Confidence 9964
No 44
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=99.96 E-value=8.9e-29 Score=166.82 Aligned_cols=79 Identities=18% Similarity=0.299 Sum_probs=73.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEE-eCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecccc
Q 034263 5 GIARGRLTEERKAWRKNHPHGFVAK-PETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHYC 83 (100)
Q Consensus 5 ~~a~~RL~~El~~l~~~~~~~~~~~-~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 83 (100)
+.+.+||++|+++| ++++++++. +.++ |+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 5 ~~~~~RL~kEl~~l--~~~~~~~~~~~~~~----~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 77 (160)
T 1y8x_A 5 SAAQLRIQKDINEL--NLPKTCDISFSDPD----DLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVY 77 (160)
T ss_dssp CHHHHHHHHHHHTC--CCCTTEEEECSSTT----CTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCC
T ss_pred cHHHHHHHHHHHhc--CCCCCeEEEeccCC----ccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCc
Confidence 46899999999999 577899988 5655 999999988 899999999999999999999999999999999999
Q ss_pred cCCCCCC
Q 034263 84 EANFSGH 90 (100)
Q Consensus 84 HPnv~~~ 90 (100)
||||+..
T Consensus 78 HPnv~~~ 84 (160)
T 1y8x_A 78 HPNIDLE 84 (160)
T ss_dssp BTTBCTT
T ss_pred cCcCCCC
Confidence 9999975
No 45
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=99.96 E-value=1e-28 Score=168.23 Aligned_cols=80 Identities=19% Similarity=0.207 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecccccC
Q 034263 6 IARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHYCEA 85 (100)
Q Consensus 6 ~a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 85 (100)
.+.+||++|+++|++++. ++ ..++ |+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||
T Consensus 12 ~~~~RL~~El~~l~~~~~-~v---~~~~----~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HP 83 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTR-KV---YPSD----TVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHP 83 (171)
T ss_dssp -CCHHHHHHHHHHHSSSS-CE---EECS----STTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBT
T ss_pred cHHHHHHHHHHHHHhCCC-CC---CCCC----CceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccc
Confidence 467999999999999874 33 3344 999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCC
Q 034263 86 NFSGHSGF 93 (100)
Q Consensus 86 nv~~~~g~ 93 (100)
||+..+|.
T Consensus 84 Ni~~~~G~ 91 (171)
T 1yf9_A 84 NVDERSGS 91 (171)
T ss_dssp TBCTTTCB
T ss_pred cCcccCCe
Confidence 99975453
No 46
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=99.96 E-value=1.7e-28 Score=184.97 Aligned_cols=82 Identities=29% Similarity=0.537 Sum_probs=79.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccccc
Q 034263 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHYCE 84 (100)
Q Consensus 5 ~~a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (100)
+.|.+||++|+++|++++++++++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 2 s~a~~RL~kEl~~l~~~~~~~~~~~p~~~----nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 77 (399)
T 4ddg_A 2 AMALKRIHKELNDLARDPPAQCSAGPVGD----DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYH 77 (399)
T ss_dssp HHHHHHHHHHHHHHHHSCCSSEEEEEETT----EEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCC----cceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccc
Confidence 67999999999999999999999999887 99999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 034263 85 ANFSGH 90 (100)
Q Consensus 85 Pnv~~~ 90 (100)
|||+..
T Consensus 78 Pnv~~~ 83 (399)
T 4ddg_A 78 PNINSN 83 (399)
T ss_dssp TTBCTT
T ss_pred cccCCC
Confidence 999964
No 47
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=99.95 E-value=1.4e-28 Score=168.75 Aligned_cols=79 Identities=18% Similarity=0.299 Sum_probs=73.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEE-eCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecccc
Q 034263 5 GIARGRLTEERKAWRKNHPHGFVAK-PETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHYC 83 (100)
Q Consensus 5 ~~a~~RL~~El~~l~~~~~~~~~~~-~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 83 (100)
+.+.+||++|+++| ++++++++. +.++ |+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|+||
T Consensus 25 ~~~~~RL~kEl~~l--~~~~~i~~~~p~~~----nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~ 97 (180)
T 2nvu_C 25 SAAQLRIQKDINEL--NLPKTCDISFSDPD----DLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVY 97 (180)
T ss_dssp CHHHHHHHHHHHTC--CCCTTEEEECSSTT----CTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCC
T ss_pred cHHHHHHHHHHHhc--CCCCCeEEEecccc----cccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCc
Confidence 56899999999999 577899998 5555 999999988 999999999999999999999999999999999999
Q ss_pred cCCCCCC
Q 034263 84 EANFSGH 90 (100)
Q Consensus 84 HPnv~~~ 90 (100)
||||+..
T Consensus 98 HPNV~~~ 104 (180)
T 2nvu_C 98 HPNIDLE 104 (180)
T ss_dssp BTTBCTT
T ss_pred cCCCCCC
Confidence 9999975
No 48
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.94 E-value=5e-27 Score=161.79 Aligned_cols=80 Identities=26% Similarity=0.492 Sum_probs=74.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccccc
Q 034263 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHYCE 84 (100)
Q Consensus 5 ~~a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (100)
+.+.+||++|+++|++++++++++.+.++ |+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+ |
T Consensus 13 ~~a~~RL~kEl~~l~~~~~~~i~~~p~~~----nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~ 86 (187)
T 2f4w_A 13 TTATQRLKQDYLRIKKDPVPYICAEPLPS----NILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--N 86 (187)
T ss_dssp -CHHHHHHHHHHHHHHSCCTTEEEEEETT----EEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--C
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCC----ccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--C
Confidence 35889999999999999999999998877 99999999999999999999999999999999999999999999 8
Q ss_pred CCCCCC
Q 034263 85 ANFSGH 90 (100)
Q Consensus 85 Pnv~~~ 90 (100)
||++..
T Consensus 87 ~~~~~~ 92 (187)
T 2f4w_A 87 GRFKCN 92 (187)
T ss_dssp SSBCTT
T ss_pred ceeccC
Confidence 888754
No 49
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=99.94 E-value=6.5e-28 Score=166.14 Aligned_cols=81 Identities=16% Similarity=0.241 Sum_probs=76.1
Q ss_pred hHHHHHHHHHHHHHHHcC---CCCeEEEeCCCCCCCCcceEEEEEeCC-CCCCCCC-----------CEEEEEEEcCCCC
Q 034263 5 GIARGRLTEERKAWRKNH---PHGFVAKPETKDGSVNLMIWECIIPGK-TGTDWEG-----------GYFPLTLYFSEDY 69 (100)
Q Consensus 5 ~~a~~RL~~El~~l~~~~---~~~~~~~~~~~~g~~~l~~w~~~i~gp-~~t~y~g-----------g~f~~~i~fp~~Y 69 (100)
..|.+||++|+++|++++ +.++++.+.++ |+++|.++|.|| ++|||+| |.|+|+|.||++|
T Consensus 26 ~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~~d----nl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~Y 101 (186)
T 1zuo_A 26 VQASDRLMKELRDIYRSQSYKTGIYSVELIND----SLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNF 101 (186)
T ss_dssp HHHHHHHHHHHHHHHTSHHHHTTSEEEEEETT----EEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTT
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCcEEEEEcCC----ccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCC
Confidence 678999999999999987 68899998887 999999999997 8999998 8999999999999
Q ss_pred CCCCCeEEEecccccC-CCCC
Q 034263 70 PSKPPKWVETCHYCEA-NFSG 89 (100)
Q Consensus 70 P~~pP~v~f~t~i~HP-nv~~ 89 (100)
|++||+|+|.|++||| ||+.
T Consensus 102 P~~PP~V~f~tpi~hPnnV~~ 122 (186)
T 1zuo_A 102 PFDPPFVRVVLPVLSGGYVLG 122 (186)
T ss_dssp TSSCCEEEEEESCEESTTBCG
T ss_pred CCCCCeEEEeCCccCCCccCC
Confidence 9999999999999999 6984
No 50
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=99.94 E-value=7e-27 Score=172.10 Aligned_cols=82 Identities=24% Similarity=0.438 Sum_probs=75.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCC----eEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEec
Q 034263 5 GIARGRLTEERKAWRKNHPHG----FVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETC 80 (100)
Q Consensus 5 ~~a~~RL~~El~~l~~~~~~~----~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (100)
+.+.+||++|+++|+++++++ +.+.+.++ |++.|+++|.||++|||+||+|+|+|.||++||++||+|+|.|
T Consensus 75 ~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ed----nl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T 150 (323)
T 3ceg_A 75 AARARRLAQEAVTLSTSLPLSSSSSVFVRCDEE----RLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLET 150 (323)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCSSCCEEEEEESS----CTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECC
T ss_pred HHHHHHHHHHHHHHHhCCCCCcccceeecccCC----CccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEec
Confidence 678999999999999988764 45666666 9999999999999999999999999999999999999999999
Q ss_pred c-----cccCCCCCC
Q 034263 81 H-----YCEANFSGH 90 (100)
Q Consensus 81 ~-----i~HPnv~~~ 90 (100)
+ +|||||+..
T Consensus 151 ~~g~~~ifHPNV~~~ 165 (323)
T 3ceg_A 151 TGGHSVRFNPNLYND 165 (323)
T ss_dssp STTTTCCCBTTBCTT
T ss_pred cCCCcccccCCCCcC
Confidence 8 999999854
No 51
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=99.94 E-value=3.5e-27 Score=162.90 Aligned_cols=79 Identities=24% Similarity=0.312 Sum_probs=72.6
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEE----eCCCCCCCCcc---eEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEE
Q 034263 5 GIARGRLTEERKAWRKNHPHGFVAK----PETKDGSVNLM---IWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWV 77 (100)
Q Consensus 5 ~~a~~RL~~El~~l~~~~~~~~~~~----~~~~~g~~~l~---~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~ 77 (100)
+.|.+||++|+++|+ +++++++. +.++ |++ +|+++|. |++|||+||.|+++|.||++||++||+|+
T Consensus 28 s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~----nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~ 100 (190)
T 3o2u_A 28 SAARIRLKRDLDSLD--LPPTVTLNVITSPDSA----DRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVV 100 (190)
T ss_dssp CHHHHHHHHHHHTCC--CCTTEEEEEEECTTCC----CTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEE
T ss_pred cHHHHHHHHHHHhcc--CCCCEEEEecCCCCCc----cCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeE
Confidence 578999999999998 67899988 5555 999 9999997 88899999999999999999999999999
Q ss_pred EecccccCCCCCC
Q 034263 78 ETCHYCEANFSGH 90 (100)
Q Consensus 78 f~t~i~HPnv~~~ 90 (100)
|.|+||||||+..
T Consensus 101 f~t~i~HPnV~~~ 113 (190)
T 3o2u_A 101 CLKKIFHPNIDLK 113 (190)
T ss_dssp ECSCCCCTTBCTT
T ss_pred EecCcccCCCCCC
Confidence 9999999999863
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.85 E-value=5.7e-23 Score=138.70 Aligned_cols=74 Identities=20% Similarity=0.238 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCC----------EEEEEEEcCCCCCCCCCeE
Q 034263 7 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGG----------YFPLTLYFSEDYPSKPPKW 76 (100)
Q Consensus 7 a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg----------~f~~~i~fp~~YP~~pP~v 76 (100)
..+||++|+++|.+. +.+.++ |+++|.+.+.||++|+|+|| .|+|+|.||++||++||+|
T Consensus 33 w~~RL~eE~k~L~k~------v~p~k~----n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV 102 (172)
T 2z6o_A 33 WVQRLKEEYQSLIRY------VENNKN----ADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEI 102 (172)
T ss_dssp HHHHHHHHHHHHHHH------HHHHHH----TTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCC
T ss_pred HHHHHHHHHHHHHHH------hccCcc----ccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCee
Confidence 399999999999983 455566 89999999999999999999 9999999999999999999
Q ss_pred EEecc-cccCCCCCC
Q 034263 77 VETCH-YCEANFSGH 90 (100)
Q Consensus 77 ~f~t~-i~HPnv~~~ 90 (100)
+|.+. +|||||+..
T Consensus 103 ~F~~~~~~hpnmY~~ 117 (172)
T 2z6o_A 103 AVPELDGKTAKMYRG 117 (172)
T ss_dssp BCGGGTTTCSSBCTT
T ss_pred eeCCCCCCCCCCCCC
Confidence 99998 999999874
No 53
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.42 E-value=1.6e-14 Score=95.96 Aligned_cols=74 Identities=19% Similarity=0.253 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCC----------EEEEEEEcCCCCCCCCCeE
Q 034263 7 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGG----------YFPLTLYFSEDYPSKPPKW 76 (100)
Q Consensus 7 a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg----------~f~~~i~fp~~YP~~pP~v 76 (100)
=..||+.|+..|.+. + ....+ +-..|...+.||++|+|.|+ .|++++.||.+||.+||+|
T Consensus 35 w~~RlkeEy~alI~y----v--~~nK~----~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI 104 (168)
T 3kpa_A 35 WTARLKEEYASLITY----V--EHNKA----SDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEI 104 (168)
T ss_dssp HHHHHHHHHHHHHHH----H--HHHHH----TTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCC
T ss_pred HHHHHHHHHHHHHHH----H--Hhccc----ccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEe
Confidence 467999999999752 1 11222 33679999999999999999 9999999999999999999
Q ss_pred EEecc-cccCCCCCC
Q 034263 77 VETCH-YCEANFSGH 90 (100)
Q Consensus 77 ~f~t~-i~HPnv~~~ 90 (100)
+|.+. ++|||++..
T Consensus 105 ~Fp~ldgkt~kmYr~ 119 (168)
T 3kpa_A 105 ALPELEGKTVKMYRG 119 (168)
T ss_dssp BCGGGTTTCSSEETT
T ss_pred ecccccCcCccccCC
Confidence 99995 899999754
No 54
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.18 E-value=5.1e-11 Score=80.19 Aligned_cols=80 Identities=18% Similarity=0.202 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHcCCCCeE----EEeCCCCCCCCcceEEEEEeCCCCCCCCCCE---EEEEEEcCCCCCCCCCeEEEec
Q 034263 8 RGRLTEERKAWRKNHPHGFV----AKPETKDGSVNLMIWECIIPGKTGTDWEGGY---FPLTLYFSEDYPSKPPKWVETC 80 (100)
Q Consensus 8 ~~RL~~El~~l~~~~~~~~~----~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~---f~~~i~fp~~YP~~pP~v~f~t 80 (100)
.+|..+|+..+.+. .+.+. ....+| ....+.+.+.|.-..+|+|+. |.+.|.||.+||++||.|.|.+
T Consensus 30 ~~~~~~dv~~~l~~-yp~L~p~t~~yt~~d----G~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p 104 (162)
T 3r3q_A 30 GRTTFHDSLALLDN-FHSLRPRTRVFTHSD----GTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINL 104 (162)
T ss_dssp HHHHHHHHHHHHHH-CTTEEEEEEEEECTT----SCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECG
T ss_pred hhHHHHHHHHHHHh-CCCCceeeeeEEcCC----CChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEEC
Confidence 46777888877653 22332 234444 666677777777779999999 8899999999999999997755
Q ss_pred -------c---cc-cCCCCCCCCC
Q 034263 81 -------H---YC-EANFSGHSGF 93 (100)
Q Consensus 81 -------~---i~-HPnv~~~~g~ 93 (100)
+ |+ |||||.+ |.
T Consensus 105 ~t~~m~~~~~~I~~hpnVD~~-G~ 127 (162)
T 3r3q_A 105 ENFDMNTISSSLPIQEYIDSN-GW 127 (162)
T ss_dssp GGCCTTTSCTTSTHHHHBCTT-SB
T ss_pred CCccccccccccCCCCCCCCC-Cc
Confidence 1 88 9999986 53
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=98.68 E-value=4.2e-08 Score=64.90 Aligned_cols=51 Identities=22% Similarity=0.395 Sum_probs=44.4
Q ss_pred CCcceEEEEEeCCCCCCCCCCEEEE--EEEcCCCCCCCCCeEEEecc------cccCCCCCCCCC
Q 034263 37 VNLMIWECIIPGKTGTDWEGGYFPL--TLYFSEDYPSKPPKWVETCH------YCEANFSGHSGF 93 (100)
Q Consensus 37 ~~l~~w~~~i~gp~~t~y~gg~f~~--~i~fp~~YP~~pP~v~f~t~------i~HPnv~~~~g~ 93 (100)
.++..|..+|. .+|+|+.|.+ .|-||++||++||.| |.++ .+|||||.+ |.
T Consensus 51 ~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~~-G~ 109 (146)
T 3obq_A 51 RELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDAN-GK 109 (146)
T ss_dssp CEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCTT-CB
T ss_pred heEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCCC-CC
Confidence 38899999997 6899999995 888999999999999 7777 689999986 53
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.93 E-value=0.011 Score=37.12 Aligned_cols=68 Identities=19% Similarity=0.247 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEec
Q 034263 7 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETC 80 (100)
Q Consensus 7 a~~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (100)
...+...|+..|+.-=...+.. ..+ ....+.+.|..-.+..-+.-.+.|.|.||.+||.+||.|....
T Consensus 11 ~~e~q~~EleaL~sIy~d~~~~--~~~----~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 11 YGEEQRNELEALESIYPDSFTV--LSE----NPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEE--CCS----SSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred hHHHHHHHHHHHHHHccCceEE--ccC----CCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 4566778999887643444433 222 3456677765211212223468899999999999999998765
No 57
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=96.28 E-value=0.062 Score=33.54 Aligned_cols=71 Identities=14% Similarity=0.042 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCC--CCCEEEEEEEcCCCCCCCCCeEEEecc
Q 034263 9 GRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDW--EGGYFPLTLYFSEDYPSKPPKWVETCH 81 (100)
Q Consensus 9 ~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y--~gg~f~~~i~fp~~YP~~pP~v~f~t~ 81 (100)
.+...|+..|+.-=...+....... ......+.+.|..+.+..- ..-.+.|.|.+|.+||..+|.|.....
T Consensus 11 e~~~~EleaL~SIY~de~~~~~~~~--~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~ 83 (128)
T 2day_A 11 WVLPSEVEVLESIYLDELQVIKGNG--RTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNP 83 (128)
T ss_dssp CHHHHHHHHHHHHSTTTEEEECCTT--SSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCceEEecCCC--CCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcC
Confidence 4577899888764444454322111 0034456666653222111 123788999999999999999987763
No 58
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=96.17 E-value=0.076 Score=33.60 Aligned_cols=71 Identities=18% Similarity=0.112 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEeCCCC-CC---CCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecc
Q 034263 8 RGRLTEERKAWRKNHPHGFVAKPETKD-GS---VNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCH 81 (100)
Q Consensus 8 ~~RL~~El~~l~~~~~~~~~~~~~~~~-g~---~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~ 81 (100)
..+-..|+..|..-=...+.. ..+. +. .....+.+.|....+ .-..-.+.|.+.+|.+||..+|.|.....
T Consensus 12 ~e~q~~EleaL~SIY~d~~~~--~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~~ 86 (138)
T 2yz0_A 12 YEIQCNELEAIRSIYMDDFTD--LTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKNV 86 (138)
T ss_dssp HHHHHHHHHHHHTTSSSSEEC--CSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEECC
T ss_pred HHHHHHHHHHHHHHChhhhee--cccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEecC
Confidence 345566887777533333322 1110 00 024567888873222 11134788999999999999999987653
No 59
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.69 E-value=0.1 Score=32.66 Aligned_cols=67 Identities=12% Similarity=0.060 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHcCCC--CeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEe
Q 034263 9 GRLTEERKAWRKNHPH--GFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVET 79 (100)
Q Consensus 9 ~RL~~El~~l~~~~~~--~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~ 79 (100)
.+...|+..|+.-=.. .+...-.... +...+.+.|.. .+..=..-.+.|.+.+|.+||..+|.|...
T Consensus 10 e~q~~EleaL~SIy~d~~e~~~~~~~~~---~~~~f~i~l~~-~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 10 EPVQEELSVLAAIFCRPHEWEVLSRSET---DGTVFRIHTKA-EGFMDADIPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp HHHHHHHHHHHHHHCCTTTCCCSEECSS---SCEEEEEEEEC-CTTTTCCCEEEEEEEECSSTTSSCCCCCCC
T ss_pred HHHHHHHHHHHHHcCCCCceEEecCCCC---CCCeEEEEecC-CCCCCCCeEEEEEEECCCCCCCCCCeEEEE
Confidence 3456788887653111 2321111110 34578888863 321101237899999999999999998755
No 60
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=94.58 E-value=0.44 Score=29.84 Aligned_cols=73 Identities=14% Similarity=0.016 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEeCCCCCC-CCcceEEEEEeCCCC-CCC-CCCEEEEEEEcCCCCCCCCCeEEEec
Q 034263 7 ARGRLTEERKAWRKNHPHGFVAKPETKDGS-VNLMIWECIIPGKTG-TDW-EGGYFPLTLYFSEDYPSKPPKWVETC 80 (100)
Q Consensus 7 a~~RL~~El~~l~~~~~~~~~~~~~~~~g~-~~l~~w~~~i~gp~~-t~y-~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (100)
...+...|+..|+.-=...+........+. .....+.+.|. +.+ +-- ..-.+.|.|.||.+||..+|.|....
T Consensus 11 ~~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 11 YSQRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp HHHHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred hHHHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 355677888888764334443321110000 01345677776 322 100 12368999999999999999998743
No 61
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=93.43 E-value=0.16 Score=32.96 Aligned_cols=24 Identities=13% Similarity=0.199 Sum_probs=21.7
Q ss_pred EEEEEEEcCCCCCCCCCeEEEecc
Q 034263 58 YFPLTLYFSEDYPSKPPKWVETCH 81 (100)
Q Consensus 58 ~f~~~i~fp~~YP~~pP~v~f~t~ 81 (100)
.+.|.|.+|.+||..+|.|.....
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~~ 99 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRSS 99 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEECS
T ss_pred eEEEEEEcCCCCCCCCCcEEEEeC
Confidence 799999999999999999987664
No 62
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=92.52 E-value=0.088 Score=34.02 Aligned_cols=24 Identities=21% Similarity=0.336 Sum_probs=21.2
Q ss_pred EEEEEEEcCCCCCCCCCeEEEecc
Q 034263 58 YFPLTLYFSEDYPSKPPKWVETCH 81 (100)
Q Consensus 58 ~f~~~i~fp~~YP~~pP~v~f~t~ 81 (100)
.+.|.|.+|.+||..||.|.....
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEECT
T ss_pred eEEEEEECCCCCCCCCCeEEEEcc
Confidence 588999999999999999987664
No 63
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=88.24 E-value=2.2 Score=28.86 Aligned_cols=60 Identities=15% Similarity=0.140 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHcCCCCeEEEeCCCCCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccc
Q 034263 9 GRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCHY 82 (100)
Q Consensus 9 ~RL~~El~~l~~~~~~~~~~~~~~~~g~~~l~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i 82 (100)
++|.+|+.+|-=+. +...+. ++....+.+.- -.|..-.++|.++.+||.++|.+...-++
T Consensus 4 ~~li~Ei~~iGW~~-----l~~id~----~~~~i~l~~~D-----~~gR~H~l~v~l~~~yp~~~P~~~~DlP~ 63 (186)
T 3zqs_A 4 SSLIEEIGTLGWDK-----LVYADT----CFSTIKLKAED-----ASGREHLITLKLKAKYPAESPDYFVDFPV 63 (186)
T ss_dssp CSHHHHHHHHCGGG-----EEEECT----TSSEEEEEEEC-----TTSCEEEEEEECCTTTTTSCCEEECCCSS
T ss_pred HHHHHHHHHhCCce-----eeeecC----CccEEEEEEEe-----CCCCeEEEEEEECCCCCCCCCeeEEcCCC
Confidence 46888888884322 222344 77778888772 24688999999999999999977655444
No 64
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=60.75 E-value=6.2 Score=17.69 Aligned_cols=20 Identities=35% Similarity=0.395 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHcCCCCe
Q 034263 7 ARGRLTEERKAWRKNHPHGF 26 (100)
Q Consensus 7 a~~RL~~El~~l~~~~~~~~ 26 (100)
-..||.-|+...+.+|+.+.
T Consensus 6 eldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 6 ELDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHHhhhccCCCCCC
Confidence 56799999999998887653
No 65
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=48.72 E-value=19 Score=24.47 Aligned_cols=26 Identities=12% Similarity=0.257 Sum_probs=22.6
Q ss_pred CCCEEEEEEEcCCCCCC-----CCCeEEEec
Q 034263 55 EGGYFPLTLYFSEDYPS-----KPPKWVETC 80 (100)
Q Consensus 55 ~gg~f~~~i~fp~~YP~-----~pP~v~f~t 80 (100)
+.|.|.|+-.+|--||. .||.|.|..
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~V 139 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLII 139 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEEE
Confidence 46999999999999998 799998765
No 66
>2ccv_A Helix pomatia agglutinin; lectin, snail; HET: A2G NAG; 1.30A {Helix pomatia} SCOP: b.154.1.1 PDB: 2cgy_A* 2cgz_A* 2ce6_A
Probab=37.43 E-value=60 Score=19.23 Aligned_cols=28 Identities=14% Similarity=0.255 Sum_probs=21.6
Q ss_pred CCEEEEEEEcCCCCCCCCCeEEEeccccc
Q 034263 56 GGYFPLTLYFSEDYPSKPPKWVETCHYCE 84 (100)
Q Consensus 56 gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (100)
+..+...|.|+..|. ++|+|.+--..+.
T Consensus 28 ~R~~~~~V~F~~~F~-~~P~V~v~l~~lD 55 (101)
T 2ccv_A 28 TRELAKNITFASPYC-RPPVVLLSITQLD 55 (101)
T ss_dssp CEEEEEEEECSSCCS-SCCEEEEEEEEEE
T ss_pred ceEEEEEeEeCcccC-CCCEEEEEeEEEe
Confidence 347889999999999 6999976655443
No 67
>2rf4_B DNA-directed RNA polymerase I subunit RPA4; transferase DNA/RNA, DNA-binding, phosphorylation, POL I, POLI, rpoli, nuclear protein; 3.10A {Saccharomyces cerevisiae}
Probab=30.46 E-value=24 Score=20.84 Aligned_cols=12 Identities=17% Similarity=0.194 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHH
Q 034263 7 ARGRLTEERKAW 18 (100)
Q Consensus 7 a~~RL~~El~~l 18 (100)
-+|||++||+=|
T Consensus 63 QLKRvQRdlrGL 74 (87)
T 2rf4_B 63 QLKRIQRDFKGL 74 (87)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHhhcCC
Confidence 467888887755
No 68
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=30.06 E-value=33 Score=23.83 Aligned_cols=26 Identities=19% Similarity=0.409 Sum_probs=22.1
Q ss_pred CCCEEEEEEEcCCCCC-------CCCCeEEEec
Q 034263 55 EGGYFPLTLYFSEDYP-------SKPPKWVETC 80 (100)
Q Consensus 55 ~gg~f~~~i~fp~~YP-------~~pP~v~f~t 80 (100)
+.|.|.|+-.+|--|| ..||.|.|..
T Consensus 134 ~~G~y~F~TI~Pg~Yp~~~~~~~~RpaHIH~~V 166 (241)
T 2bum_B 134 DNGYYVFRTIKPGPYPWRNRINEWRPAHIHFSL 166 (241)
T ss_dssp TTSEEEEEEECCCCEEESSSTTEEECSEEEEEE
T ss_pred CCceEEEEEecCCccccCCCCCCCcCceEEEEE
Confidence 3599999999999998 4799998765
No 69
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=29.47 E-value=34 Score=24.74 Aligned_cols=25 Identities=12% Similarity=0.157 Sum_probs=21.1
Q ss_pred CCEEEEEEEcCCCCC------------------CCCCeEEEec
Q 034263 56 GGYFPLTLYFSEDYP------------------SKPPKWVETC 80 (100)
Q Consensus 56 gg~f~~~i~fp~~YP------------------~~pP~v~f~t 80 (100)
.|.|.|+-.+|--|| ..||.|.|..
T Consensus 188 ~G~y~F~TI~Pg~Y~ip~dGp~G~lL~~~grh~~RpaHIH~~V 230 (312)
T 2xsu_A 188 NGKYVALTTMPVGYGCPPEGTTQALLNKLGRHGNRPSHVHYFV 230 (312)
T ss_dssp TSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECCEEEEEE
T ss_pred CceEEEEEECcCcccCCCCCcHHHHHHHhhccCCCCceEEEEE
Confidence 499999999999998 5688887764
No 70
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=29.33 E-value=35 Score=23.72 Aligned_cols=25 Identities=16% Similarity=0.264 Sum_probs=22.0
Q ss_pred CCEEEEEEEcCCCCCC-------CCCeEEEec
Q 034263 56 GGYFPLTLYFSEDYPS-------KPPKWVETC 80 (100)
Q Consensus 56 gg~f~~~i~fp~~YP~-------~pP~v~f~t 80 (100)
.|.|.|+-.+|--||. .||.|.|..
T Consensus 134 ~G~y~F~TI~Pg~Yp~p~~~~~~Rp~HIHf~V 165 (238)
T 3t63_M 134 DGYYSFRTIKPGPAPWRNGPNDWRPAHIYFGI 165 (238)
T ss_dssp TSEEEEEEECCCCEEESSSTTEEECSEEEEEE
T ss_pred CceEEEEEECCcCccCCCCCCCCcCCeEEEEE
Confidence 4999999999999986 789998775
No 71
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=27.84 E-value=37 Score=24.49 Aligned_cols=25 Identities=12% Similarity=0.143 Sum_probs=21.2
Q ss_pred CCEEEEEEEcCCCCC------------------CCCCeEEEec
Q 034263 56 GGYFPLTLYFSEDYP------------------SKPPKWVETC 80 (100)
Q Consensus 56 gg~f~~~i~fp~~YP------------------~~pP~v~f~t 80 (100)
.|.|.|+-.+|--|| ..||.|.|..
T Consensus 184 ~G~y~F~TI~Pg~Y~~p~dGp~g~lL~~~grh~~RpaHIHf~V 226 (311)
T 2azq_A 184 EGRYRARSIVPSGYGCDPQGPTQECLDLLGRHGQRPAHVHFFI 226 (311)
T ss_dssp TCEEEEEEECCCCEECCTTSHHHHHHHHHTCCCEECCEEEEEE
T ss_pred CceEEEEEEcCCCcCCCCCCcHHHHHHhhhccCCCCceEEEEE
Confidence 499999999999998 4599998764
No 72
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=27.51 E-value=39 Score=24.21 Aligned_cols=26 Identities=12% Similarity=0.161 Sum_probs=21.6
Q ss_pred CCCEEEEEEEcCCCCC------------------CCCCeEEEec
Q 034263 55 EGGYFPLTLYFSEDYP------------------SKPPKWVETC 80 (100)
Q Consensus 55 ~gg~f~~~i~fp~~YP------------------~~pP~v~f~t 80 (100)
+.|.|.|+-.+|--|| ..||.|.|..
T Consensus 183 ~~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~V 226 (293)
T 1tmx_A 183 PDGGYAFWAITPTPYPIPHDGPVGRMLAATGRSPMRASHLHFMV 226 (293)
T ss_dssp TTSEEEEEEECCCCEECCCSSHHHHHHHHTTCCCEECCEEEEEE
T ss_pred CCceEEEEEECCCcccCCCCCchHHHHHhcccCCCCCceEEEEE
Confidence 3589999999999998 4599998764
No 73
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=27.08 E-value=43 Score=22.55 Aligned_cols=24 Identities=13% Similarity=0.038 Sum_probs=21.1
Q ss_pred CEEEEEEEcCCCCCCC-----CCeEEEec
Q 034263 57 GYFPLTLYFSEDYPSK-----PPKWVETC 80 (100)
Q Consensus 57 g~f~~~i~fp~~YP~~-----pP~v~f~t 80 (100)
|.|.|+-.+|--||.. ||.|.|.-
T Consensus 102 G~~~F~TI~Pg~Y~~~~g~~rp~HIH~~V 130 (200)
T 3t63_A 102 GEWTLHTVKPGVVNNAAGVPMAPHINISL 130 (200)
T ss_dssp CSEEEEEECCCCEECTTSCEECSCEEEEE
T ss_pred CEEEEEEECCcCcCCCCCCccCCEEEEEE
Confidence 8999999999999987 88887764
No 74
>3kxt_A Chromatin protein CREN7; protein-DNA complex, crenarchaea chromatin protein, minor-GR binding, methylation; 1.60A {Sulfolobus solfataricus} PDB: 2jtm_A 3lwh_A* 3lwi_A*
Probab=26.67 E-value=46 Score=17.92 Aligned_cols=11 Identities=27% Similarity=0.643 Sum_probs=8.6
Q ss_pred EEEEcCCCCCC
Q 034263 61 LTLYFSEDYPS 71 (100)
Q Consensus 61 ~~i~fp~~YP~ 71 (100)
|+-.+|++||.
T Consensus 46 fR~k~pddy~~ 56 (56)
T 3kxt_A 46 FRHKLPDDYPI 56 (56)
T ss_dssp EEEECCTTCCC
T ss_pred eeeeCcCcCCC
Confidence 46678999984
No 75
>3ra3_B P2F; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=26.46 E-value=43 Score=15.08 Aligned_cols=13 Identities=31% Similarity=0.355 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHH
Q 034263 7 ARGRLTEERKAWR 19 (100)
Q Consensus 7 a~~RL~~El~~l~ 19 (100)
...||.+|+..|.
T Consensus 8 knarlkqeiaale 20 (28)
T 3ra3_B 8 KNARLKQEIAALE 20 (28)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHH
Confidence 3458888888775
No 76
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=26.08 E-value=43 Score=23.95 Aligned_cols=25 Identities=20% Similarity=0.335 Sum_probs=21.3
Q ss_pred CCEEEEEEEcCCCCCC------------------CCCeEEEec
Q 034263 56 GGYFPLTLYFSEDYPS------------------KPPKWVETC 80 (100)
Q Consensus 56 gg~f~~~i~fp~~YP~------------------~pP~v~f~t 80 (100)
.|.|.|+-.+|--||. .||.|.|.-
T Consensus 181 ~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~V 223 (290)
T 3n9t_A 181 DGCFAIQTTVPVCYPIPTDGPVGEMLDAANRHAWRPAHLHFMI 223 (290)
T ss_dssp TSEEEEEEECCCCEECCCSSHHHHHHHHHTCCCEECCEEEEEE
T ss_pred CceEEEEEeCCCCcCCCCCCcHHHHHHhccCCCCcCceEEEEE
Confidence 4999999999999994 689997764
No 77
>3g9r_A Fusion complex of HIV-1 envelope glycoprotein and saccharomyces cerevisiae general...; GP41, MPER, membrane fusion, AIDS; 2.00A {Human immunodeficiency virus 1}
Probab=25.98 E-value=52 Score=16.51 Aligned_cols=14 Identities=29% Similarity=0.294 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHH
Q 034263 7 ARGRLTEERKAWRK 20 (100)
Q Consensus 7 a~~RL~~El~~l~~ 20 (100)
..+||..|++++++
T Consensus 29 ~~~~~~~~~~~~~~ 42 (42)
T 3g9r_A 29 KIKRIENEIKRIKK 42 (42)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcC
Confidence 57899999998863
No 78
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=25.66 E-value=45 Score=23.35 Aligned_cols=25 Identities=20% Similarity=0.274 Sum_probs=20.7
Q ss_pred CCEEEEEEEcCCCCC------------------CCCCeEEEec
Q 034263 56 GGYFPLTLYFSEDYP------------------SKPPKWVETC 80 (100)
Q Consensus 56 gg~f~~~i~fp~~YP------------------~~pP~v~f~t 80 (100)
.|.|.|+-.+|--|| ..||.|.|..
T Consensus 154 ~G~y~F~TI~Pg~Y~~p~dGp~G~ll~~~grh~~RpaHIH~~V 196 (254)
T 2boy_A 154 NGRFTLRTIVPAPYEIPKNGPTGALLAAAGWHAWRPAHLHWII 196 (254)
T ss_dssp TSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECCEEEEEE
T ss_pred CceEEEEEECCccccCCCCCcHHHHHHhcccccCCCceEEEEE
Confidence 499999999999887 4689998764
No 79
>1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A*
Probab=24.60 E-value=46 Score=24.03 Aligned_cols=25 Identities=12% Similarity=0.284 Sum_probs=21.1
Q ss_pred CCEEEEEEEcCCCCC------------------CCCCeEEEec
Q 034263 56 GGYFPLTLYFSEDYP------------------SKPPKWVETC 80 (100)
Q Consensus 56 gg~f~~~i~fp~~YP------------------~~pP~v~f~t 80 (100)
.|.|.|+-.+|--|| ..||.|.|..
T Consensus 187 ~G~y~F~TI~Pg~Yp~p~dgp~g~lL~~~grh~~RpaHIHf~V 229 (311)
T 1dmh_A 187 NGQYRVRTILPAGYGCPPEGPTQQLLNQLGRHGNRPAHIHYFV 229 (311)
T ss_dssp TSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECSEEEEEE
T ss_pred CceEEEEEEcCCcccCCCCCcHHHHHHhcccCCCCCceEEEEE
Confidence 499999999999997 4699998764
No 80
>3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A*
Probab=22.64 E-value=48 Score=23.59 Aligned_cols=25 Identities=16% Similarity=0.247 Sum_probs=20.6
Q ss_pred CCEEEEEEEcCCCCC------------------CCCCeEEEec
Q 034263 56 GGYFPLTLYFSEDYP------------------SKPPKWVETC 80 (100)
Q Consensus 56 gg~f~~~i~fp~~YP------------------~~pP~v~f~t 80 (100)
.|.|.|+-.+|--|| ..||.|.|.-
T Consensus 183 dG~y~F~TI~Pg~Yp~p~dGp~G~lL~~~grh~~RpaHIH~~V 225 (280)
T 3hhy_A 183 EGRYEITTIQPAPYQIPTDGPTGQFIEAQNGHPWRPAHLHLIV 225 (280)
T ss_dssp TSEEEEEEECCCCEECCCSSHHHHHHHHTTCCCEECSCEEEEE
T ss_pred CceEEEEEECCcCcCCCCCCcHHHHHHhcCCCCCCCcEEEEEE
Confidence 399999999998887 4689887764
No 81
>4dac_A Computationally designed crystal forming protein; alpha-helix, three-helix bundle, coiled-coil protein, DE NOV computational protein design; 2.10A {Synthetic}
Probab=22.63 E-value=66 Score=14.46 Aligned_cols=15 Identities=20% Similarity=0.098 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHHH
Q 034263 6 IARGRLTEERKAWRK 20 (100)
Q Consensus 6 ~a~~RL~~El~~l~~ 20 (100)
...+||.+|.-.|.-
T Consensus 8 anvkrlekevgkleg 22 (28)
T 4dac_A 8 ANVKRLEKEVGKLEG 22 (28)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHhhhhh
Confidence 357899999988864
No 82
>2xa6_A KH domain-containing\,RNA-binding\,signal transduction-associated protein 1; transcription, STAR proteins, CD44, cell cycle; NMR {Homo sapiens}
Probab=22.15 E-value=79 Score=15.93 Aligned_cols=15 Identities=33% Similarity=0.151 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHHH
Q 034263 6 IARGRLTEERKAWRK 20 (100)
Q Consensus 6 ~a~~RL~~El~~l~~ 20 (100)
.|.|-|.+|+.++++
T Consensus 26 Ha~RLl~~EIek~qk 40 (41)
T 2xa6_A 26 HAMQLLTAEIEKIQK 40 (41)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc
Confidence 478889999999876
No 83
>3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida}
Probab=21.68 E-value=73 Score=22.37 Aligned_cols=25 Identities=12% Similarity=0.183 Sum_probs=19.7
Q ss_pred CCEEEEEEEcCCCC------------------CCCCCeEEEec
Q 034263 56 GGYFPLTLYFSEDY------------------PSKPPKWVETC 80 (100)
Q Consensus 56 gg~f~~~i~fp~~Y------------------P~~pP~v~f~t 80 (100)
.|.|.|+=.+|--| |..|+.|.|.-
T Consensus 151 ~G~y~F~TI~P~~Ypip~dGp~g~ll~~~gr~~~RpaHIHf~v 193 (260)
T 3th1_A 151 QGNYRVRTTMPVPYQIPYEGPTGRLLGHLGSHTWRPAHVHFKV 193 (260)
T ss_dssp TSEEEEEEECCCCEECCCSSHHHHHHHHTTCCSEECCEEEEEE
T ss_pred CCEEEEEEECCCCCCCCCCCcHHHHHHhcCCCCCCCCeEEEEE
Confidence 38999999999776 45688888763
No 84
>4b0y_A Heme-binding protein 2; apoptosis; 3.50A {Homo sapiens}
Probab=20.91 E-value=66 Score=21.97 Aligned_cols=26 Identities=15% Similarity=0.397 Sum_probs=19.8
Q ss_pred CCCCCCCCCEEEEEEEcCCCCCCCCC
Q 034263 49 KTGTDWEGGYFPLTLYFSEDYPSKPP 74 (100)
Q Consensus 49 p~~t~y~gg~f~~~i~fp~~YP~~pP 74 (100)
|..++..++.|.+.+.+|.+|-..||
T Consensus 117 p~~~~~~~~~~tvsF~lP~~~q~~pP 142 (227)
T 4b0y_A 117 PGSGPFSESTITISLYIPSEQQFDPP 142 (227)
T ss_dssp CCC--CCCEEEEEEEECCGGGSSSCC
T ss_pred cCCCcccCceEEEEEEcChhhccCCC
Confidence 55667778899999999999976665
No 85
>2bsj_A Chaperone protein SYCT; type III secretion, effector, YOPT; 1.83A {Yersinia enterocolitica} PDB: 2bho_A 2bsh_A 2bsi_A
Probab=20.60 E-value=78 Score=19.69 Aligned_cols=17 Identities=12% Similarity=0.124 Sum_probs=10.8
Q ss_pred CCCCCCCCCCEEEEEEE
Q 034263 48 GKTGTDWEGGYFPLTLY 64 (100)
Q Consensus 48 gp~~t~y~gg~f~~~i~ 64 (100)
|-+.++-++|+|.|+|.
T Consensus 20 Gl~~~~~edgiYtlevD 36 (133)
T 2bsj_A 20 GLNHQVNENDVYTFEVD 36 (133)
T ss_dssp TCCCCCCTTCCEEEEEE
T ss_pred CCCCCCCcCceEEEEEc
Confidence 44556667777776664
No 86
>1nkg_A Rhamnogalacturonase B; polysaccharide lyase, carbohydrate active enzyme, pectin, LY; 1.50A {Aspergillus aculeatus} SCOP: b.3.1.2 b.18.1.25 b.30.5.10 PDB: 2xhn_A* 3njv_A* 3njx_A
Probab=20.09 E-value=73 Score=24.52 Aligned_cols=58 Identities=7% Similarity=-0.021 Sum_probs=37.0
Q ss_pred ceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecc----cccCCCCCCCCCcCCccCC
Q 034263 40 MIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKWVETCH----YCEANFSGHSGFAGSTQSC 100 (100)
Q Consensus 40 ~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~----i~HPnv~~~~g~~~~~~~~ 100 (100)
..|.+.+.=.. .+ .+.++|+|.+...+....|+|+.... ...|......+.++++..|
T Consensus 399 ~~w~I~F~l~~-~~--~~~~tLri~la~a~a~~~~qV~VN~~~~~~~~~~~~~~~~~i~R~~~~G 460 (508)
T 1nkg_A 399 NPVTIKFTATS-AQ--TGAATLRIGTTLSFAGGRPQATINSYTGSAPAAPTNLDSRGVTRGAYRG 460 (508)
T ss_dssp CCEEEEEEECG-GG--CSCEEEEEEEEEEETTCEEEEEETTEECCCCCCCCCCCSCCGGGTCCCS
T ss_pred CcEEEEEEcCc-cc--CCceEEEEEehhhccCCCeEEEECCcCCcCccccccCCCCeEEecceee
Confidence 45776665322 22 56899999988888878899987742 2234444455666666544
Done!