Query 034269
Match_columns 100
No_of_seqs 103 out of 202
Neff 3.6
Searched_HMMs 13730
Date Mon Mar 25 20:00:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034269.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/034269hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2h9ec1 g.22.1.1 (C:6-83) Anti 62.8 0.34 2.5E-05 29.2 -1.6 53 40-93 8-74 (78)
2 d1jv2b5 g.3.11.6 (B:563-605) I 62.4 1.3 9.2E-05 24.9 1.0 19 67-85 21-40 (43)
3 d1xu2r_ g.24.1.2 (R:) Tumor ne 47.7 3.5 0.00025 22.3 1.2 19 46-64 17-35 (36)
4 d1exta1 g.24.1.1 (A:13-71) Tum 45.9 2 0.00015 24.6 -0.0 25 65-92 16-49 (59)
5 d2aepa1 b.68.1.1 (A:83-469) In 36.0 3.8 0.00028 32.0 0.2 18 73-90 185-202 (387)
6 d1f8ea_ b.68.1.1 (A:) Influenz 32.7 4.7 0.00034 31.5 0.2 17 74-90 188-204 (388)
7 d1hx2a_ g.22.1.2 (A:) BSTI {Fi 32.0 1 7.4E-05 26.0 -3.0 36 40-79 11-46 (60)
8 d2c7na1 g.39.1.15 (A:18-73) Ra 23.2 7.1 0.00052 22.9 -0.3 16 76-91 7-26 (56)
9 d2heyr3 g.24.1.1 (R:29-82) Tum 19.8 6.2 0.00045 22.2 -1.0 26 64-92 12-45 (54)
10 d1kloa3 g.3.11.2 (A:122-172) L 19.5 14 0.001 20.1 0.5 21 70-90 1-28 (51)
No 1
>d2h9ec1 g.22.1.1 (C:6-83) Anticoagulant protein {Dog hookworm (Ancylostoma caninum) [TaxId: 29170]}
Probab=62.76 E-value=0.34 Score=29.23 Aligned_cols=53 Identities=21% Similarity=0.422 Sum_probs=23.7
Q ss_pred CCchH-HhhHHhhcCCCCchHHHHhhH------hcCcccccCCCCCCCC-------CCCCcccccccc
Q 034269 40 IDCGG-ACQARCRLSSRPNLCHRACGT------CCARCNCVPPGTAGNT-------EVCPCYANMTTH 93 (100)
Q Consensus 40 ~~C~~-~C~~RC~~~~~~~~C~~~C~~------CC~~C~CVP~Gt~Gn~-------~~CpCY~~~~t~ 93 (100)
.+|++ .|..-|+.-.....|...++. |=.-|.| |+|++-|. ++|||+.+=++.
T Consensus 8 ~~C~~~~C~~tC~~~~~~~~c~~~~~~~c~~~~CveGC~C-p~G~v~~~~g~CV~~~~CpC~~~g~~Y 74 (78)
T d2h9ec1 8 DSCGSKECDKKCKYDGVEEEDDEEPNVPCLVRVCHQDCVC-EEGFYRNKDDKCVSAEDCELDNMDFIY 74 (78)
T ss_dssp C-------CCBCCCTTCC-------------------CEE-CSSCEECTTCCEECHHHHGGGGEEEEC
T ss_pred cccCCCcCccccCCCcccccccccCCccccCCCCCCcCCC-CCCeeEcCCCCEEChhhCCcccCCEEc
Confidence 35665 477777665555555554443 3456778 89998765 467898766554
No 2
>d1jv2b5 g.3.11.6 (B:563-605) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=62.41 E-value=1.3 Score=24.87 Aligned_cols=19 Identities=53% Similarity=1.424 Sum_probs=15.0
Q ss_pred cCcccccCCCCCCCC-CCCC
Q 034269 67 CARCNCVPPGTAGNT-EVCP 85 (100)
Q Consensus 67 C~~C~CVP~Gt~Gn~-~~Cp 85 (100)
|++|.|--||.+|.. |+||
T Consensus 21 cG~C~C~~~gy~G~~Ce~Cp 40 (43)
T d1jv2b5 21 CGSCVCIQPGSYGDTCEKCP 40 (43)
T ss_dssp TTEEEECCSSCBSTTSCBCT
T ss_pred CCEeEeCCCCccCCccccCC
Confidence 789999777888865 5665
No 3
>d1xu2r_ g.24.1.2 (R:) Tumor necrosis factor receptor superfamily member 17, BCMA {Human (Homo sapiens) [TaxId: 9606]}
Probab=47.68 E-value=3.5 Score=22.34 Aligned_cols=19 Identities=42% Similarity=1.031 Sum_probs=17.4
Q ss_pred hhHHhhcCCCCchHHHHhh
Q 034269 46 CQARCRLSSRPNLCHRACG 64 (100)
Q Consensus 46 C~~RC~~~~~~~~C~~~C~ 64 (100)
|.-|||..+-+-.|.+||+
T Consensus 17 c~lrcs~~~ppl~cq~yc~ 35 (36)
T d1xu2r_ 17 CQLRCSSNTPPLTCQRYCN 35 (36)
T ss_dssp GGGTTTSSSCCGGGHHHHH
T ss_pred ceeecCCCCCchhhhhhcc
Confidence 7889999999999999996
No 4
>d1exta1 g.24.1.1 (A:13-71) Tumor necrosis factor (TNF) receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.87 E-value=2 Score=24.59 Aligned_cols=25 Identities=36% Similarity=0.870 Sum_probs=16.7
Q ss_pred HhcCcccccCCCCC------CC--CCCC-Cccccccc
Q 034269 65 TCCARCNCVPPGTA------GN--TEVC-PCYANMTT 92 (100)
Q Consensus 65 ~CC~~C~CVP~Gt~------Gn--~~~C-pCY~~~~t 92 (100)
.||.+| ||||| +. .-+| ||-..-.|
T Consensus 16 ~cC~~C---ppG~~~~~~Ct~~~~~t~C~pC~~gtyt 49 (59)
T d1exta1 16 ICCTKC---HKGTYLYNDCPGPGQDTDCRECESGSFT 49 (59)
T ss_dssp CEEECB---CTTEEEEECCSSTTSCCEEEECCTTEEC
T ss_pred cCCCCC---CCCCeecCccCCCCCCCEeccCCCCCcc
Confidence 456665 89988 42 4688 78766544
No 5
>d2aepa1 b.68.1.1 (A:83-469) Influenza neuraminidase {Influenza A virus, different strains [TaxId: 11320]}
Probab=36.03 E-value=3.8 Score=31.97 Aligned_cols=18 Identities=33% Similarity=0.746 Sum_probs=15.4
Q ss_pred cCCCCCCCCCCCCccccc
Q 034269 73 VPPGTAGNTEVCPCYANM 90 (100)
Q Consensus 73 VP~Gt~Gn~~~CpCY~~~ 90 (100)
.++|+.++.|||.||.+.
T Consensus 185 ~l~g~~~HiEECSCYp~~ 202 (387)
T d2aepa1 185 PLSGSAQHVEECSCYPRY 202 (387)
T ss_dssp ECCSSCCCCEEEEEEEET
T ss_pred ecCCCcCceEeeeecCCC
Confidence 367999999999999876
No 6
>d1f8ea_ b.68.1.1 (A:) Influenza neuraminidase {Influenza A virus, different strains [TaxId: 11320]}
Probab=32.67 E-value=4.7 Score=31.46 Aligned_cols=17 Identities=41% Similarity=0.815 Sum_probs=14.6
Q ss_pred CCCCCCCCCCCCccccc
Q 034269 74 PPGTAGNTEVCPCYANM 90 (100)
Q Consensus 74 P~Gt~Gn~~~CpCY~~~ 90 (100)
++|+.++.|||.||.+.
T Consensus 188 l~g~~~HiEECSCYp~~ 204 (388)
T d1f8ea_ 188 LAGTAKHIEECSCYGER 204 (388)
T ss_dssp CCSSCCCCEEEEEEEET
T ss_pred cCCCcCceEeeeecCCC
Confidence 57899999999999874
No 7
>d1hx2a_ g.22.1.2 (A:) BSTI {Fire-bellied toad (Bombina bombina) [TaxId: 8345]}
Probab=32.05 E-value=1 Score=25.99 Aligned_cols=36 Identities=31% Similarity=0.855 Sum_probs=26.4
Q ss_pred CCchHHhhHHhhcCCCCchHHHHhhHhcCcccccCCCCCC
Q 034269 40 IDCGGACQARCRLSSRPNLCHRACGTCCARCNCVPPGTAG 79 (100)
Q Consensus 40 ~~C~~~C~~RC~~~~~~~~C~~~C~~CC~~C~CVP~Gt~G 79 (100)
.+|+++|..-|+.-.....|.+.|- .-|.| |+|+.=
T Consensus 11 ~~C~s~Cp~tC~~~~~~~~C~~~C~---eGC~C-p~G~vl 46 (60)
T d1hx2a_ 11 QTCASSCPKTCETRNKLVLCDKKCN---QRCGC-ISGTVL 46 (60)
T ss_dssp ESSCCSSCCCTTTCCCSSSCSSCCC---SEEEE-CTTCEE
T ss_pred CcccCCCccccCCCCCCCCCCCCCC---ccCCC-CCCEeE
Confidence 3688888888987777777776543 56778 888763
No 8
>d2c7na1 g.39.1.15 (A:18-73) RabGEF1 (Rabex-5), ubiquitin-binding domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.23 E-value=7.1 Score=22.87 Aligned_cols=16 Identities=31% Similarity=0.731 Sum_probs=12.0
Q ss_pred CCCCC---CCCC-Ccccccc
Q 034269 76 GTAGN---TEVC-PCYANMT 91 (100)
Q Consensus 76 Gt~Gn---~~~C-pCY~~~~ 91 (100)
|.||| ...| .||+++.
T Consensus 7 GFyG~~~~~g~CSkCyr~~~ 26 (56)
T d2c7na1 7 GYYGNPAWQGFCSKCWREEY 26 (56)
T ss_dssp SSCCCGGGTTCCHHHHHHHH
T ss_pred CCCCCcccCCcchHHHHHHH
Confidence 67775 5789 6999874
No 9
>d2heyr3 g.24.1.1 (R:29-82) Tumor necrosis factor receptor superfamily member 4, OX40L receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.85 E-value=6.2 Score=22.18 Aligned_cols=26 Identities=35% Similarity=1.034 Sum_probs=15.9
Q ss_pred hHhcCcccccCCCCC-------CCCCCC-Cccccccc
Q 034269 64 GTCCARCNCVPPGTA-------GNTEVC-PCYANMTT 92 (100)
Q Consensus 64 ~~CC~~C~CVP~Gt~-------Gn~~~C-pCY~~~~t 92 (100)
|.||.+| ||||| +..-+| ||-....|
T Consensus 12 g~CC~~C---~pG~~~~~~Cs~~~~t~C~pC~~gtyt 45 (54)
T d2heyr3 12 DRCCHEC---RPGNGMVSRCSRSQNTVCRPCGPGFYN 45 (54)
T ss_dssp TEEEECB---CTTEEEEECCCSSCCCEEEECCTTEEC
T ss_pred CeECCCC---CCCCeEcCcCCCCCCCeeccCcCCCcc
Confidence 5677775 78876 344567 67555444
No 10
>d1kloa3 g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=19.53 E-value=14 Score=20.08 Aligned_cols=21 Identities=33% Similarity=0.912 Sum_probs=14.3
Q ss_pred ccccCCCCCCCC-------CCCCccccc
Q 034269 70 CNCVPPGTAGNT-------EVCPCYANM 90 (100)
Q Consensus 70 C~CVP~Gt~Gn~-------~~CpCY~~~ 90 (100)
|+|-|.||.++. ..|+|-.+.
T Consensus 1 C~C~~~Gs~~~~~~Cd~~tGqC~Ck~~v 28 (51)
T d1kloa3 1 CACNPYGTVQQQSSCNPVTGQCQCLPHV 28 (51)
T ss_dssp CCCCTTTBGGGCCCCCTTTCCCCBCTTE
T ss_pred CcCCCCcccCCCCccCCCCCeecCCCCC
Confidence 788899887653 366675554
Done!