Citrus Sinensis ID: 034273

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------10
MSRAMDEDTTGGKTEEEEFNTGPLSVLMMSVKNNTQLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
ccccccccccccccccccccccccEEEEEEEEccEEEEEEEEEcccccccEEcccEEEEECccccccccccCEEEEEEEEEcEEEEcccEEEEEEcccc
*******************NTGPLSVLMMSVKNNTQLLGRVRAFDRHCNMVLENVREMWTEL***********PVNKDRFISKMFLRGDSVIIVLRNP*
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MSRAMDEDTTGGKTEEEEFNTGPLSVLMMSVKNNTQLLGRVRAFDRHCNMVLENVREMWTELPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Small nuclear ribonucleoprotein Sm D2 Required for pre-mRNA splicing. Required for snRNP biogenesis.probableP62316
Probable small nuclear ribonucleoprotein Sm D2 Required for pre-mRNA splicing. Required for snRNP biogenesis.probableQ18786
Probable small nuclear ribonucleoprotein Sm D2 Required for pre-mRNA splicing. Required for snRNP biogenesis.probableQ9VI10

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1B34, chain B
Confidence level:very confident
Coverage over the Query: 21-58,78-99
View the alignment between query and template
View the model in PyMOL