BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034275
(99 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6Q560|ISD11_YEAST Protein ISD11 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=ISD11 PE=1 SV=1
Length = 94
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%)
Query: 4 PGQAAPIRPEILGLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESISSAYAE 63
PG AP R ++L LY+ ++ A +F +YN REY + FR+N N DP+ + + + E
Sbjct: 2 PGFTAPTRRQVLSLYKEFIKNANQFNNYNFREYFLSKTRTTFRKNMNQQDPKVLMNLFKE 61
Query: 64 GKNQLAIAKRQAVVYSLYA 82
KN L + KRQ+V+ +Y
Sbjct: 62 AKNDLGVLKRQSVISQMYT 80
>sp|Q9HD34|LYRM4_HUMAN LYR motif-containing protein 4 OS=Homo sapiens GN=LYRM4 PE=1 SV=1
Length = 91
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%)
Query: 7 AAPIRPEILGLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESISSAYAEGKN 66
AA R ++L LYRA+LR ++ F YN R Y RR D FREN+N+ DP I + + K
Sbjct: 2 AASSRAQVLSLYRAMLRESKRFSAYNYRTYAVRRIRDAFRENKNVKDPVEIQTLVNKAKR 61
Query: 67 QLAIAKRQAVVYSLYAP 83
L + +RQ + LY+
Sbjct: 62 DLGVIRRQVHIGQLYST 78
>sp|B5FZA8|LYRM4_TAEGU LYR motif-containing protein 4 OS=Taeniopygia guttata GN=LYRM4
PE=3 SV=1
Length = 89
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 7 AAPIRPEILGLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESISSAYAEGKN 66
AA R ++L LYRALLR ++ F YN R Y RR D FREN+N+ D E I + K
Sbjct: 2 AASSRAQVLRLYRALLRESQRFSSYNYRTYAIRRIRDAFRENKNIADSEKIEELLNKAKA 61
Query: 67 QLAIAKRQAVVYSLYAPKVKSIME 90
L + +RQ + +YA + K I+E
Sbjct: 62 NLEVIQRQGTIDHMYATE-KLIIE 84
>sp|Q0VCG0|LYRM4_BOVIN LYR motif-containing protein 4 OS=Bos taurus GN=LYRM4 PE=3 SV=1
Length = 91
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%)
Query: 7 AAPIRPEILGLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESISSAYAEGKN 66
AA R ++L LYRA+LR ++ F YN R Y RR D FREN+N+ DP I + + K
Sbjct: 2 AASSRAQVLDLYRAMLRESKRFGAYNYRTYAIRRIRDAFRENKNVKDPVEIQALVNKAKR 61
Query: 67 QLAIAKRQAVVYSLYAPKVKSIMELENP 94
L I +RQ + +Y+ I E P
Sbjct: 62 DLGIIRRQVHIGQMYSTDKLVIENQEKP 89
>sp|Q8K215|LYRM4_MOUSE LYR motif-containing protein 4 OS=Mus musculus GN=Lyrm4 PE=2 SV=1
Length = 91
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%)
Query: 7 AAPIRPEILGLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESISSAYAEGKN 66
AA R ++L LYRA++R ++ F YN R Y RR D FREN+N+ DP I + + K
Sbjct: 2 AASSRAQVLDLYRAMMRESKHFSAYNYRMYAVRRIRDAFRENKNVKDPVEIQALVNKAKR 61
Query: 67 QLAIAKRQAVVYSLYAPKVKSIMELENP 94
L I +RQ + LY+ I E P
Sbjct: 62 DLEIIRRQVHIGQLYSTDKLIIENQEKP 89
>sp|B8JLQ0|LYRM4_DANRE LYR motif-containing protein 4 OS=Danio rerio GN=lyrm4 PE=3 SV=1
Length = 89
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 7 AAPIRPEILGLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESISSAYAEGKN 66
A+ R +++ LYR L++ +++F YN R Y RR DGFREN ++ +P ++ + +
Sbjct: 2 ASCSRAQVISLYRMLMKESKKFPSYNYRTYALRRVKDGFRENLHVDNPRTLDLLINQARE 61
Query: 67 QLAIAKRQAVVYSLYAPKVKSIMELE 92
LA+ KRQ + LY+ + ++++E E
Sbjct: 62 NLAVIKRQVSIGHLYSAQ-RTVVEKE 86
>sp|B5X5U9|LYM4A_SALSA LYR motif-containing protein 4A OS=Salmo salar GN=lyrm4a PE=3
SV=1
Length = 92
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 7 AAPIRPEILGLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESISSAYAEGKN 66
AA R +++ LYR L++ +++F YN R Y RR D FREN ++ +P+++ + +
Sbjct: 2 AACSRTQVISLYRMLIKESKKFPSYNYRTYALRRVKDSFRENLHVDNPKTLDMLLNQARE 61
Query: 67 QLAIAKRQAVVYSLYAPKVKSIME 90
LA+ +RQ + +Y + ++I+E
Sbjct: 62 NLAVIRRQVSIGQMYTAQ-RTIVE 84
>sp|B5XD90|LYM4B_SALSA LYR motif-containing protein 4B OS=Salmo salar GN=lyrm4b PE=3
SV=1
Length = 84
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 8 APIRPEILGLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESISSAYAEGKNQ 67
A ++L LYR L++ + +F YN R Y RR D FR N+++ DP+ + +G++
Sbjct: 2 AACTAQVLSLYRKLMKESNKFPSYNYRTYALRRVQDAFRANRSVEDPKMVEQLLNQGRDN 61
Query: 68 LAIAKRQAVVYSLYAPKVKSIME 90
L + +RQ + +Y P K+I+E
Sbjct: 62 LDMIRRQVAIGKMY-PTQKTIVE 83
>sp|Q54FN9|LYRM4_DICDI LYR motif-containing protein 4 OS=Dictyostelium discoideum
GN=lyrm4 PE=3 SV=1
Length = 81
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 14 ILGLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESISSAYAEGKNQLAIAKR 73
+L LYR+L+R +++F YN REY+ RR GFREN+N D + L + KR
Sbjct: 7 VLHLYRSLVRESKKFSSYNFREYSLRRVSVGFRENKN-KDQNETKELIQDALKNLEMVKR 65
Query: 74 QAVVYSLYAP 83
QA + S+Y+
Sbjct: 66 QAFINSMYST 75
>sp|Q6DCS1|LYRM4_XENLA LYR motif-containing protein 4 OS=Xenopus laevis GN=lyrm4 PE=3
SV=1
Length = 89
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 7 AAPIRPEILGLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESISSAYAEGKN 66
+A R ++L LY+ +LR ++ F YN R Y RR D FRE +N+ D I + K
Sbjct: 2 SASSRSQVLSLYKIMLRESQRFSSYNYRTYAIRRIRDAFREKKNVDDFLEIETLLHRAKE 61
Query: 67 QLAIAKRQAVVYSLYAP 83
L + +RQ + +YA
Sbjct: 62 NLNVIQRQVTIGQMYAT 78
>sp|O46098|BCN92_DROME Protein bcn92 OS=Drosophila melanogaster GN=bcn92 PE=3 SV=1
Length = 92
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 11 RPEILGLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESISSAYAEGKNQLAI 70
R + + LYR LLR + + YN R Y R+ D FR N++ D I AEG+ L +
Sbjct: 4 RRQAITLYRNLLRESEKLPSYNFRMYAARKIRDTFRANRSTRDFAEIDRQMAEGQQNLEL 63
Query: 71 AKRQAVVYSLYA 82
+RQ ++ LY+
Sbjct: 64 IRRQVIIGHLYS 75
>sp|P82116|BCN92_DROSU Protein bcn92 OS=Drosophila subobscura GN=bcn92 PE=3 SV=1
Length = 92
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%)
Query: 11 RPEILGLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESISSAYAEGKNQLAI 70
R + + LYR LLR + + YN R Y R+ D FR N+ + D I GK L +
Sbjct: 4 RRQAITLYRNLLRESEKLPAYNFRMYAVRKIRDAFRANKAIRDFAEIDRQMEAGKQNLEL 63
Query: 71 AKRQAVVYSLYA 82
+RQ ++ LY
Sbjct: 64 IRRQVIIGHLYT 75
>sp|O60068|ISD11_SCHPO Protein isd11 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=isd11 PE=3 SV=1
Length = 102
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 11 RPEILGLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESISSAYAEGKNQLAI 70
+ ++ LYR +L+ ++ F Y REYT RR D F+E + +DP + + L I
Sbjct: 5 KQHVVRLYRNILKTSKLF-PYTYREYTIRRTRDKFKELKVESDPAKFEQGIKDSEKLLEI 63
Query: 71 AKRQAVVYSLY 81
+RQ+++ +Y
Sbjct: 64 IQRQSIINGMY 74
>sp|Q9CQB7|LYRM1_MOUSE LYR motif-containing protein 1 OS=Mus musculus GN=Lyrm1 PE=2 SV=1
Length = 122
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 7 AAPIRPEILGLYRALLRAAREFR--------DYNVREYTKRRAIDGFRENQNLTDPESIS 58
A R E+L LYR++ R AR+++ ++Y + A F++N+NLTDPE I
Sbjct: 2 TAATRQEVLCLYRSIFRLARKWQAASGQMEDTIEEKQYILKEARTLFQKNKNLTDPELIK 61
Query: 59 SAYAEGKNQLAIAKRQAVVY 78
E ++ I + Y
Sbjct: 62 QCIVECTARIEIGLHYQIPY 81
>sp|Q6DGP7|LYRM1_DANRE LYR motif containing protein 1 OS=Danio rerio GN=lyrm1 PE=2 SV=1
Length = 118
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 11 RPEILGLYRALLRAAREFR-------DYNV-REYTKRRAIDGFRENQNLTDPESISSAYA 62
R +L LYR +LR AR ++ D + ++Y + A FR+NQ +TDPESI
Sbjct: 3 RANVLSLYRRVLRIARSWKAQSSIPKDTDTEKKYITQEARTLFRQNQQITDPESIQRCME 62
Query: 63 EGKNQLAIA 71
E + ++ I
Sbjct: 63 ECEARIEIG 71
>sp|B3DLF3|LYRM2_XENTR LYR motif-containing protein 2 OS=Xenopus tropicalis GN=lyrm2
PE=3 SV=1
Length = 87
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 10 IRPEILGLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESISSAYAEGKNQL 68
+R ++LGLYR +LR+ R+ D + Y + A + FR N+ T+ +I G+ QL
Sbjct: 17 VRQQVLGLYRKILRSVRQIPDAADQRYMQEWAREEFRRNKGATEEIAIRMMITHGQRQL 75
>sp|B5FYC7|LYRM1_TAEGU LYR motif-containing protein 1 OS=Taeniopygia guttata GN=LYRM1
PE=2 SV=1
Length = 122
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Query: 11 RPEILGLYRALLRAAREFRD--------YNVREYTKRRAIDGFRENQNLTDPESISSAYA 62
R E+LGLYR + R A+ ++ +EY + A FR+N+N+TDP I
Sbjct: 6 RQEVLGLYRKVFRIAKNWQSASGQIEETMREKEYIRNEARTLFRKNKNVTDPNLIKQCIE 65
Query: 63 EGKNQLAIAKRQAVVY 78
E + ++ I + Y
Sbjct: 66 ECEARIEIGLHYNIPY 81
>sp|Q5PQ90|LYRM2_XENLA LYR motif-containing protein 2 OS=Xenopus laevis GN=lyrm2 PE=3
SV=1
Length = 87
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 10 IRPEILGLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESISSAYAEGKNQL 68
+R ++LGLYR ++RA R+ R+Y + A D FR N+ ++ +I + G+ QL
Sbjct: 17 VRQQVLGLYRRIVRAVRQIPGAADRQYLQDWARDEFRRNKGASEEIAIRMMISHGQRQL 75
>sp|B2RYU8|LYRM1_RAT LYR motif-containing protein 1 OS=Rattus norvegicus GN=Lyrm1 PE=2
SV=1
Length = 122
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 7 AAPIRPEILGLYRALLRAAREFR--------DYNVREYTKRRAIDGFRENQNLTDPESIS 58
A R E+LGLYR+ R AR+++ ++Y A F++N+NLTDP+ I
Sbjct: 2 TAASRQEVLGLYRSFFRLARKWQAASGQMEDTIKEKQYILNEARTLFQKNKNLTDPDLIK 61
Query: 59 SAYAEGKNQLAIAKRQAVVY 78
E ++ I + Y
Sbjct: 62 QCIDECTARIEIGLHYQIPY 81
>sp|B2C6F2|ISD11_TRAHO Protein ISD11 OS=Trachipleistophora hominis GN=ISD11 PE=1 SV=1
Length = 71
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 13 EILGLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESISSAYAEGKNQL-AIA 71
+I Y ALL + F++ N+R Y KR+A D + E N P Y + +L +
Sbjct: 3 KITNTYSALLSSITNFKNRNIRAYFKRKAFDEYLECVNGVRP---VEKYLKDNEELKGVM 59
Query: 72 KRQAVVYSLY 81
RQ+V+Y+ Y
Sbjct: 60 DRQSVIYNFY 69
>sp|O43325|LYRM1_HUMAN LYR motif-containing protein 1 OS=Homo sapiens GN=LYRM1 PE=2 SV=1
Length = 122
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Query: 11 RPEILGLYRALLRAAREFR--------DYNVREYTKRRAIDGFRENQNLTDPESISSAYA 62
R E+LGLYR++ R AR+++ ++Y A FR+N+NLTD + I
Sbjct: 6 RQEVLGLYRSIFRLARKWQATSGQMEDTIKEKQYILNEARTLFRKNKNLTDTDLIKQCID 65
Query: 63 EGKNQLAIAKRQAVVY 78
E ++ I + Y
Sbjct: 66 ECTARIEIGLHYKIPY 81
>sp|B5XFA7|LYRM2_SALSA LYR motif-containing protein 2 OS=Salmo salar GN=lyrm2 PE=3 SV=1
Length = 90
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 11 RPEILGLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESI 57
R ++L LYR ++R R+ D R+Y + A D F+ N+N T+ ++I
Sbjct: 19 RQKVLSLYRNMMRTIRQVPDEGDRKYLRDWARDEFKRNKNSTNQDAI 65
>sp|Q5RIM0|LYRM2_DANRE LYR motif-containing protein 2 OS=Danio rerio GN=lyrm2 PE=3 SV=1
Length = 88
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 11 RPEILGLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESISSAYAEGKNQLAI 70
R ++L LYR L R R + R+Y + A D FR N++ TD ++I ++ N L
Sbjct: 19 RQKVLCLYRDLQRTIRRVPHESDRKYLRDWARDEFRRNKSNTDQDAIRMMISQAHNHLEE 78
Query: 71 AKR 73
+R
Sbjct: 79 LRR 81
>sp|Q8R033|LYRM2_MOUSE LYR motif-containing protein 2 OS=Mus musculus GN=Lyrm2 PE=2 SV=1
Length = 88
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 11 RPEILGLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESISSAYAEGKNQL 68
R ++L LYR +LRA R+ + R+Y + A + F+ N++ T+ ++I +G QL
Sbjct: 19 RQQVLLLYRKILRAIRQVPSDSDRKYLQDWAREEFKRNKSATEEDTIRMMITQGNMQL 76
>sp|Q91V16|LYRM5_MOUSE LYR motif-containing protein 5 OS=Mus musculus GN=Lyrm5 PE=2 SV=1
Length = 86
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 7 AAPIRPEILGLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESISSAYAEG 64
A +R E+L LY+ LL R++ +Y KRR + F +N+++ DPE I A G
Sbjct: 2 ANSLRGEVLTLYKNLLYLGRDYP--KGADYFKRRLKNVFLKNKDVEDPEKIKELIARG 57
>sp|Q32LM5|LYRM2_BOVIN LYR motif-containing protein 2 OS=Bos taurus GN=LYRM2 PE=3 SV=1
Length = 88
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 11 RPEILGLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESISSAYAEGKNQL 68
R ++L LYR +L+A R+ + + R+Y K A + F+ N++ T+ ++I +G QL
Sbjct: 19 RQQVLLLYRRILQAIRQVPNDSDRKYLKDWAREEFKRNKSATEEDTIRMMITQGNMQL 76
>sp|Q9NU23|LYRM2_HUMAN LYR motif-containing protein 2 OS=Homo sapiens GN=LYRM2 PE=1 SV=1
Length = 88
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 11 RPEILGLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESISSAYAEGKNQL 68
R ++L LYR +L+ R+ + + R+Y K A + FR N++ T+ ++I +G QL
Sbjct: 19 RQQVLLLYRRILQTIRQVPNDSDRKYLKDWAREEFRRNKSATEEDTIRMMITQGNMQL 76
>sp|A9UMQ3|LYRM1_XENLA LYR motif-containing protein 1 OS=Xenopus laevis GN=lyrm1 PE=2
SV=1
Length = 122
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Query: 7 AAPIRPEILGLYRALLRAAREFR--------DYNVREYTKRRAIDGFRENQNLTDPESIS 58
A RPE+L LYR + R AR+++ REY A F N+ +TD I
Sbjct: 2 TAGTRPEVLHLYRQIFRIARKWQAASGLMEETIKEREYIVDEARKLFHRNKQITDVAMIK 61
Query: 59 SAYAEGKNQLAIA 71
E K ++ I
Sbjct: 62 ECTEECKARIEIG 74
>sp|B5FXA0|LYRM5_TAEGU LYR motif-containing protein 5 OS=Taeniopygia guttata GN=LYRM5
PE=3 SV=1
Length = 86
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 7 AAPIRPEILGLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESISSAYAEGKN 66
A +R E++ LY+ LL RE+ +Y +RR F +N++ TDPE I A G
Sbjct: 2 ANSLRSEVIKLYKNLLYLGREYP--KGADYFRRRLKAAFLKNKDETDPEKIKQLIARG-- 57
Query: 67 QLAIAKRQAVVY 78
+ I + +A+ +
Sbjct: 58 EFVIKELEALYF 69
>sp|Q503U1|LYM5A_DANRE LYR motif-containing protein 5A OS=Danio rerio GN=lyrm5a PE=3
SV=1
Length = 85
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 9 PIRPEILGLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESISSAYAEGKNQL 68
P+R E++ LY+ LL RE+ Y + R F +N+++TDPE I G
Sbjct: 4 PLRGEVIRLYKNLLYLGREYPKGTA--YFRERLKTAFMKNKDVTDPEKIQKLIDRG--DF 59
Query: 69 AIAKRQAVVY 78
I + +A+ Y
Sbjct: 60 VIKELEALYY 69
>sp|B2GV91|LYRM2_RAT LYR motif-containing protein 2 OS=Rattus norvegicus GN=Lyrm2 PE=3
SV=1
Length = 88
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 11 RPEILGLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESISSAYAEGKNQL 68
R ++L LYR +LRA ++ + R+Y + A + F+ N++ T+ ++I +G QL
Sbjct: 19 RQQVLLLYRKILRAIKQIPSDSDRKYLQDWAREEFKRNKSATEEDTIRMMITQGNMQL 76
>sp|Q5RES3|LYRM2_PONAB LYR motif-containing protein 2 OS=Pongo abelii GN=LYRM2 PE=3 SV=1
Length = 88
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 11 RPEILGLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESISSAYAEGKNQL 68
R ++L LYR +L+ R+ + + R+Y K A + F+ N++ T+ ++I +G QL
Sbjct: 19 RQQVLLLYRRILQTIRQVPNDSDRKYLKDWAREEFKRNKSATEEDTIRMMITQGNMQL 76
>sp|Q54T58|LYRM1_DICDI LYR motif-containing protein 1 OS=Dictyostelium discoideum
GN=lyrm1 PE=3 SV=1
Length = 117
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%)
Query: 11 RPEILGLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESISSAYAEGKNQLAI 70
R + L +YR++LR A ++ + RE + F++N++LTD E I+ E ++++
Sbjct: 23 RNKALYMYRSILRLANKWESDSQREDIRYETRSTFQKNKDLTDTEIINDKIEEARSRMLT 82
Query: 71 AKRQAVVY 78
A + Y
Sbjct: 83 ALHYNIPY 90
>sp|B5X5L2|LYRM1_SALSA LYR motif-containing protein 1 OS=Salmo salar GN=lyrm1 PE=2 SV=1
Length = 120
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 7 AAPIRPEILGLYRALLRAAREFRDY------NVREYTKRRAIDGFRENQNLTDPESISSA 60
+ R ++L LY + R AR ++ + R Y + A FR+NQ LTD SI
Sbjct: 2 TSATRSQVLSLYMRVFRIARGWQSTLPQDTESERRYIVQEAQTLFRQNQQLTDHTSIKKC 61
Query: 61 YAEGKNQLAIA 71
E + ++ I
Sbjct: 62 IDECEARIEIG 72
>sp|B5XCZ6|LYRM5_SALSA LYR motif-containing protein 5 OS=Salmo salar GN=lyrm5 PE=3 SV=1
Length = 92
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 7 AAPIRPEILGLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESISSAYAEGKN 66
A P+R E+ LY+ LL RE+ +Y R F +N+++TDP+ I G
Sbjct: 2 ANPLRSEVRQLYKNLLFLGREYP--KGADYFGERLKRAFMKNKDVTDPKEIKKLVDRG-- 57
Query: 67 QLAIAKRQAVVY 78
+ I + +A+ Y
Sbjct: 58 EFVIKELEALYY 69
>sp|A3KNJ8|LYM5B_DANRE LYR motif-containing protein 5B OS=Danio rerio GN=lyrm5b PE=3
SV=1
Length = 84
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 7 AAPIRPEILGLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESISSAYAEGKN 66
A P R E+ LY+ALL RE+ +Y + R F +N+++ DP+ I + G
Sbjct: 2 ANPFRAEVKQLYKALLFLGREYP--KGADYFRERLRAAFAKNKDMRDPDKIKQLISRG-- 57
Query: 67 QLAIAKRQAVVY 78
+ + + +A+ Y
Sbjct: 58 EFVVKELEALYY 69
>sp|A5D7J1|LYRM9_BOVIN LYR motif-containing protein 9 OS=Bos taurus GN=LYRM9 PE=3 SV=1
Length = 78
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 15 LGLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESISS 59
L LYR LLR R+ ++E+ K FR + + +PE I
Sbjct: 14 LQLYRYLLRCCRQLPTKGIQEHYKHAVRQSFRVHSDEDNPERIQQ 58
>sp|D1Z4E1|MZM1_SORMK Mitochondrial zinc maintenance protein 1, mitochondrial
OS=Sordaria macrospora (strain ATCC MYA-333 / DSM 997 /
K(L3346) / K-hell) GN=MZM1 PE=3 SV=1
Length = 111
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 15 LGLYRALLRAAREFRDYNVREYTK--RRAIDGFRENQNL--TDP 54
L YR L+RAAR D + R T GFRENQNL DP
Sbjct: 4 LHAYRHLMRAARVAFDGDARTLTAAYESISRGFRENQNLPANDP 47
>sp|P48566|GYP3_YEAST GTPase-activating protein GYP3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MSB3 PE=1 SV=1
Length = 633
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 16 GLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESI----SSAYAEGKNQLAIA 71
G+Y LLR ++ + N E + + +D + N T P++I S EG +
Sbjct: 248 GVYSQLLRKMKQIKKQNPNE-KQVQDLDIIERDLNRTFPDNIHFQSSLHNKEGPPIIKSL 306
Query: 72 KRQAVVYSLYAPKV 85
+R V +SLY PK+
Sbjct: 307 RRVLVAFSLYNPKI 320
>sp|Q6FX35|ATG14_CANGA Autophagy-related protein 14 OS=Candida glabrata (strain ATCC 2001
/ CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=ATG14
PE=3 SV=1
Length = 364
Score = 29.6 bits (65), Expect = 5.4, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 6/54 (11%)
Query: 29 RDYNVREYTK-----RRAIDGFRENQN-LTDPESISSAYAEGKNQLAIAKRQAV 76
+D ++E ++ R I+G +NQN TDP++I A + +++L IAKR ++
Sbjct: 105 QDRRIKEKSRYIAELRSLINGPPKNQNRFTDPQTILKAQKQLQDKLEIAKRLSI 158
>sp|B2RZD7|LYRM9_RAT LYR motif-containing protein 9 OS=Rattus norvegicus GN=Lyrm9 PE=3
SV=1
Length = 78
Score = 29.3 bits (64), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 2 VSPGQAAPIRPEILGLYRALLRAAREFRDYNVREYTKRRAIDGFRENQNLTDPESISS 59
++P + A + L LYR LLR R+ ++E+ K F+ + + +PE I
Sbjct: 1 MAPLRGAELVQTPLQLYRYLLRCCRQLPTKGIQEHYKHAVRQSFQVHSDEDNPERIQQ 58
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,220,758
Number of Sequences: 539616
Number of extensions: 1190670
Number of successful extensions: 2716
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 2674
Number of HSP's gapped (non-prelim): 56
length of query: 99
length of database: 191,569,459
effective HSP length: 68
effective length of query: 31
effective length of database: 154,875,571
effective search space: 4801142701
effective search space used: 4801142701
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)