BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034277
MASSCHRFIRRSSLSSIKSAFRSNAPKSPTAASAPFPLPTKSSPSPLRRFSLSRSPSELG
CAQSLLPLHSVVAAARMTSCLSAASKSCRALSQDGIDGT

High Scoring Gene Products

Symbol, full name Information P value
AT5G47455 protein from Arabidopsis thaliana 2.3e-16
AT4G17310 protein from Arabidopsis thaliana 9.8e-16
NOXY2
AT5G11630
protein from Arabidopsis thaliana 5.5e-06
AT4G39300 protein from Arabidopsis thaliana 0.00027
AT4G34265 protein from Arabidopsis thaliana 0.00035

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034277
        (99 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006678 - symbol:AT5G47455 "AT5G47455" speci...   203  2.3e-16   1
TAIR|locus:2130819 - symbol:AT4G17310 species:3702 "Arabi...   197  9.8e-16   1
TAIR|locus:2181925 - symbol:NOXY2 "AT5G11630" species:370...   105  5.5e-06   1
TAIR|locus:2136363 - symbol:AT4G39300 "AT4G39300" species...    89  0.00027   1
TAIR|locus:505006558 - symbol:AT4G34265 "AT4G34265" speci...    88  0.00035   1


>TAIR|locus:505006678 [details] [associations]
            symbol:AT5G47455 "AT5G47455" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM;IDA] [GO:0005886 "plasma membrane"
            evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
            GO:GO:0005739 EMBL:CP002688 UniGene:At.66689 IPI:IPI00533845
            RefSeq:NP_568683.2 EnsemblPlants:AT5G47455.4 GeneID:834795
            KEGG:ath:AT5G47455 OMA:RNSPIGT Uniprot:F4JX57
        Length = 116

 Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 51/97 (52%), Positives = 59/97 (60%)

Query:     7 RFIRRSSLSSIKSAFRS---NAP----KSPTAAS-APFPLPTKXXXXXXXXXXXXXXXXX 58
             RF+ RSS+SS KSA RS   N+P     SP AAS A F +P+K                 
Sbjct:     4 RFMSRSSVSSFKSAIRSSFRNSPIGTGSSPAAASSAGFRIPSKPAASPLPRFSFSRCPSE 63

Query:    59 XGCAQSLLPLHSVVAAARMTSCLSAASKSCRALSQDG 95
              GC QSLLPLHS VAAAR+TSCLS  S+S RAL+QDG
Sbjct:    64 LGCVQSLLPLHSTVAAARLTSCLSTTSRSSRALTQDG 100


>TAIR|locus:2130819 [details] [associations]
            symbol:AT4G17310 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] EMBL:CP002687
            UniGene:At.26556 EMBL:AY050862 EMBL:BT010622 EMBL:AK175517
            IPI:IPI00546833 RefSeq:NP_193463.1 EnsemblPlants:AT4G17310.1
            GeneID:827444 KEGG:ath:AT4G17310 TAIR:At4g17310 InParanoid:Q949V8
            OMA:CRRFISK PhylomeDB:Q949V8 ProtClustDB:CLSN2680468
            Genevestigator:Q949V8 Uniprot:Q949V8
        Length = 99

 Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
 Identities = 45/93 (48%), Positives = 56/93 (60%)

Query:     1 MASSCHRFIRRSSLSSIKSAFRSNAPKSPTAASAPFPLPTKXXXXXXXXXXXXXXXXXXG 60
             MAS+C +   R+S+SS+KS  RS    +  A+SA F LP++                  G
Sbjct:     1 MASACRKLFNRASVSSLKSTLRSTTGSTSAASSAGFRLPSQPTRHFSFSRCPSEL----G 56

Query:    61 CAQSLLPLHSVVAAARMTSCLSAASKSCRALSQ 93
             C QSLLPLHS VAAAR+TSCLS  S+S RALSQ
Sbjct:    57 CVQSLLPLHSTVAAARLTSCLSTTSRSSRALSQ 89


>TAIR|locus:2181925 [details] [associations]
            symbol:NOXY2 "AT5G11630" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0042742
            "defense response to bacterium" evidence=IMP] [GO:0005739
            "mitochondrion" evidence=IDA] [GO:0048364 "root development"
            evidence=IMP] [GO:0050832 "defense response to fungus"
            evidence=IMP] [GO:0071433 "cell wall repair" evidence=IMP]
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0042742 EMBL:AL163814
            HOGENOM:HOG000237694 IPI:IPI00543806 PIR:T48522 RefSeq:NP_196724.3
            UniGene:At.32230 UniGene:At.49008 STRING:Q9LYG7
            EnsemblPlants:AT5G11630.1 GeneID:831035 KEGG:ath:AT5G11630
            TAIR:At5g11630 InParanoid:Q9LYG7 OMA:LCSANPG PhylomeDB:Q9LYG7
            ProtClustDB:CLSN2699113 Genevestigator:Q9LYG7 Uniprot:Q9LYG7
        Length = 93

 Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
 Identities = 34/94 (36%), Positives = 49/94 (52%)

Query:     1 MASSCHRFIRRSSLSSIKSAFRSNAPK-SPTAASAPFPLPTKXXXXXXXXXXXXXXXXXX 59
             MAS C R + + + S+ +SA   N P   P +AS+   +P                    
Sbjct:     1 MASRC-RSLSKPAFSAFRSAM--NKPSIRPKSASSFIGVPPSPGFSRPIGQL-------- 49

Query:    60 GCAQSLLPLHSVVAAARMTSCLSAASKSCRALSQ 93
             G  QSLLPL+S VA+AR+TSCL   S++ R+L+Q
Sbjct:    50 GSLQSLLPLYSAVASARLTSCLGIDSQNSRSLAQ 83


>TAIR|locus:2136363 [details] [associations]
            symbol:AT4G39300 "AT4G39300" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002687 EMBL:AL161595
            EMBL:AL050351 HOGENOM:HOG000237694 EMBL:AY088247 EMBL:BT004680
            EMBL:AK117138 EMBL:AK176792 EMBL:AK176869 EMBL:AK176902
            IPI:IPI00528987 PIR:T08578 RefSeq:NP_568056.1 UniGene:At.31102
            STRING:Q9T036 EnsemblPlants:AT4G39300.1 GeneID:830086
            KEGG:ath:AT4G39300 TAIR:At4g39300 eggNOG:NOG241281
            InParanoid:Q9T036 OMA:FCRSALM PhylomeDB:Q9T036
            ProtClustDB:CLSN2689835 Genevestigator:Q9T036 Uniprot:Q9T036
        Length = 96

 Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
 Identities = 30/100 (30%), Positives = 44/100 (44%)

Query:     1 MASSCHRFIRRSSLSSIKSAFRSNAPKS----PTAASAPFPLPTKXXXXXXXXXXXXXXX 56
             MAS C   +   S + + S  R+   KS    PT  S+PF                    
Sbjct:     1 MASFCRSALMAGSRNLV-SRSRTVTQKSLNLKPTTTSSPF------ASMSQSIPRASRVL 53

Query:    57 XXXGCAQSLLPLHSVVAAARMTSCLSAASKSCRALSQDGI 96
                G  ++++PLHS VA+AR+ S + AA  SC +L   G+
Sbjct:    54 SALGSVETMIPLHSAVASARLRSSI-AADSSCWSLLSQGL 92


>TAIR|locus:505006558 [details] [associations]
            symbol:AT4G34265 "AT4G34265" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002687 HOGENOM:HOG000237694
            ProtClustDB:CLSN2688123 EMBL:AY086804 EMBL:BT004935 EMBL:AK118797
            EMBL:AK175209 EMBL:AK175277 EMBL:AK175290 EMBL:AK175532
            EMBL:AK175706 EMBL:AK175886 EMBL:AK176172 EMBL:AK176282
            EMBL:AK176497 EMBL:AK176537 EMBL:AK176565 EMBL:AK176658
            EMBL:AK176803 IPI:IPI00548379 RefSeq:NP_567963.3 UniGene:At.25513
            UniGene:At.75113 EnsemblPlants:AT4G34265.1 GeneID:829576
            KEGG:ath:AT4G34265 TAIR:At4g34265 InParanoid:Q8LC44 OMA:FTNPRNL
            PhylomeDB:Q8LC44 Genevestigator:Q8LC44 Uniprot:Q8LC44
        Length = 94

 Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
 Identities = 19/40 (47%), Positives = 28/40 (70%)

Query:    60 GCAQSLLPLHSVVAAARMTSCLSAASKS-CRALSQDGIDG 98
             GC +S LPL++VVAAAR+TS L+   ++ C   + +G DG
Sbjct:    55 GCTESFLPLYNVVAAARLTSHLNVNLRAFCELSNGNGKDG 94


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.122   0.353    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       99        81   0.00091  102 3  10 22  0.38    29
                                                     29  0.42    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  506 (54 KB)
  Total size of DFA:  107 KB (2074 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.41u 0.16s 11.57t   Elapsed:  00:00:00
  Total cpu time:  11.41u 0.16s 11.57t   Elapsed:  00:00:00
  Start:  Mon May 20 16:00:19 2013   End:  Mon May 20 16:00:19 2013

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