BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034278
(99 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P63170|DYL1_RAT Dynein light chain 1, cytoplasmic OS=Rattus norvegicus GN=Dynll1
PE=1 SV=1
Length = 89
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
Query: 1 MLEGKALIEDTDMPVKMQLYAMASASQALDVYDVFDCKSIAAHIKKEFDKRYGGGWQCVV 60
M + KA+I++ DM +MQ ++ A+QAL+ Y++ K IAAHIKKEFDK+Y W C+V
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIE--KDIAAHIKKEFDKKYNPTWHCIV 58
Query: 61 GSNFGCFFTHTEGTFIYFQLETLKFLIFKG 90
G NFG + TH FIYF L + L+FK
Sbjct: 59 GRNFGSYVTHETKHFIYFYLGQVAILLFKS 88
>sp|P63169|DYL1_RABIT Dynein light chain 1, cytoplasmic OS=Oryctolagus cuniculus
GN=DYNLL1 PE=1 SV=1
Length = 89
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
Query: 1 MLEGKALIEDTDMPVKMQLYAMASASQALDVYDVFDCKSIAAHIKKEFDKRYGGGWQCVV 60
M + KA+I++ DM +MQ ++ A+QAL+ Y++ K IAAHIKKEFDK+Y W C+V
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIE--KDIAAHIKKEFDKKYNPTWHCIV 58
Query: 61 GSNFGCFFTHTEGTFIYFQLETLKFLIFKG 90
G NFG + TH FIYF L + L+FK
Sbjct: 59 GRNFGSYVTHETKHFIYFYLGQVAILLFKS 88
>sp|P63168|DYL1_MOUSE Dynein light chain 1, cytoplasmic OS=Mus musculus GN=Dynll1 PE=1
SV=1
Length = 89
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
Query: 1 MLEGKALIEDTDMPVKMQLYAMASASQALDVYDVFDCKSIAAHIKKEFDKRYGGGWQCVV 60
M + KA+I++ DM +MQ ++ A+QAL+ Y++ K IAAHIKKEFDK+Y W C+V
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIE--KDIAAHIKKEFDKKYNPTWHCIV 58
Query: 61 GSNFGCFFTHTEGTFIYFQLETLKFLIFKG 90
G NFG + TH FIYF L + L+FK
Sbjct: 59 GRNFGSYVTHETKHFIYFYLGQVAILLFKS 88
>sp|P61273|DYL1_MACFA Dynein light chain 1, cytoplasmic OS=Macaca fascicularis
GN=DYNLL1 PE=3 SV=1
Length = 89
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
Query: 1 MLEGKALIEDTDMPVKMQLYAMASASQALDVYDVFDCKSIAAHIKKEFDKRYGGGWQCVV 60
M + KA+I++ DM +MQ ++ A+QAL+ Y++ K IAAHIKKEFDK+Y W C+V
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIE--KDIAAHIKKEFDKKYNPTWHCIV 58
Query: 61 GSNFGCFFTHTEGTFIYFQLETLKFLIFKG 90
G NFG + TH FIYF L + L+FK
Sbjct: 59 GRNFGSYVTHETKHFIYFYLGQVAILLFKS 88
>sp|P63167|DYL1_HUMAN Dynein light chain 1, cytoplasmic OS=Homo sapiens GN=DYNLL1 PE=1
SV=1
Length = 89
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
Query: 1 MLEGKALIEDTDMPVKMQLYAMASASQALDVYDVFDCKSIAAHIKKEFDKRYGGGWQCVV 60
M + KA+I++ DM +MQ ++ A+QAL+ Y++ K IAAHIKKEFDK+Y W C+V
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIE--KDIAAHIKKEFDKKYNPTWHCIV 58
Query: 61 GSNFGCFFTHTEGTFIYFQLETLKFLIFKG 90
G NFG + TH FIYF L + L+FK
Sbjct: 59 GRNFGSYVTHETKHFIYFYLGQVAILLFKS 88
>sp|P61285|DYL1_BOVIN Dynein light chain 1, cytoplasmic OS=Bos taurus GN=DYNLL1 PE=1
SV=1
Length = 89
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
Query: 1 MLEGKALIEDTDMPVKMQLYAMASASQALDVYDVFDCKSIAAHIKKEFDKRYGGGWQCVV 60
M + KA+I++ DM +MQ ++ A+QAL+ Y++ K IAAHIKKEFDK+Y W C+V
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIE--KDIAAHIKKEFDKKYNPTWHCIV 58
Query: 61 GSNFGCFFTHTEGTFIYFQLETLKFLIFKG 90
G NFG + TH FIYF L + L+FK
Sbjct: 59 GRNFGSYVTHETKHFIYFYLGQVAILLFKS 88
>sp|O02414|DYL1_HELCR Dynein light chain LC6, flagellar outer arm OS=Heliocidaris
crassispina PE=3 SV=1
Length = 89
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
Query: 1 MLEGKALIEDTDMPVKMQLYAMASASQALDVYDVFDCKSIAAHIKKEFDKRYGGGWQCVV 60
M E KA+I++ DMP MQ A+ A+QAL+ +++ K IAA+IKKEFDK+Y W C+V
Sbjct: 1 MSERKAVIKNADMPEDMQQDAVDCATQALEKFNI--EKDIAAYIKKEFDKKYNPTWHCIV 58
Query: 61 GSNFGCFFTHTEGTFIYFQLETLKFLIFKG 90
G NFG + TH FIYF L + L+FK
Sbjct: 59 GRNFGSYVTHETKHFIYFYLGQVAVLLFKS 88
>sp|Q94748|DYL2_SCHMA Probable dynein light chain OS=Schistosoma mansoni PE=3 SV=1
Length = 89
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
Query: 1 MLEGKALIEDTDMPVKMQLYAMASASQALDVYDVFDCKSIAAHIKKEFDKRYGGGWQCVV 60
M E KA+I++ DM MQ A+ +A+ ALD Y++ K +AA+IKKEFD++Y W C+V
Sbjct: 1 MGERKAVIKNADMHEDMQETAVHTAAAALDKYEI--EKDVAAYIKKEFDRKYNPNWHCIV 58
Query: 61 GSNFGCFFTHTEGTFIYFQLETLKFLIFKG 90
G +FG + TH FIYF L+ FL+FK
Sbjct: 59 GKHFGSYVTHETQHFIYFYLQERAFLLFKS 88
>sp|Q22799|DYL1_CAEEL Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans
GN=dlc-1 PE=1 SV=1
Length = 89
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
Query: 1 MLEGKALIEDTDMPVKMQLYAMASASQALDVYDVFDCKSIAAHIKKEFDKRYGGGWQCVV 60
M++ KA+I++ DM MQ A+ A+QAL+ Y++ K IAA+IKKEFDK+Y W C+V
Sbjct: 1 MVDRKAVIKNADMSDDMQQDAIDCATQALEKYNIE--KDIAAYIKKEFDKKYNPTWHCIV 58
Query: 61 GSNFGCFFTHTEGTFIYFQLETLKFLIFKG 90
G NFG + TH FIYF L + L+FK
Sbjct: 59 GRNFGSYVTHETKHFIYFYLGQVAILLFKS 88
>sp|Q24117|DYL1_DROME Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster
GN=ctp PE=1 SV=1
Length = 89
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
Query: 1 MLEGKALIEDTDMPVKMQLYAMASASQALDVYDVFDCKSIAAHIKKEFDKRYGGGWQCVV 60
M + KA+I++ DM +MQ A+ A+QAL+ Y++ K IAA+IKKEFDK+Y W C+V
Sbjct: 1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIE--KDIAAYIKKEFDKKYNPTWHCIV 58
Query: 61 GSNFGCFFTHTEGTFIYFQLETLKFLIFKG 90
G NFG + TH FIYF L + L+FK
Sbjct: 59 GRNFGSYVTHETRHFIYFYLGQVAILLFKS 88
>sp|Q78P75|DYL2_RAT Dynein light chain 2, cytoplasmic OS=Rattus norvegicus GN=Dynll2
PE=1 SV=1
Length = 89
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Query: 1 MLEGKALIEDTDMPVKMQLYAMASASQALDVYDVFDCKSIAAHIKKEFDKRYGGGWQCVV 60
M + KA+I++ DM MQ A+ A+QA++ Y++ K IAA+IKKEFDK+Y W C+V
Sbjct: 1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIE--KDIAAYIKKEFDKKYNPTWHCIV 58
Query: 61 GSNFGCFFTHTEGTFIYFQLETLKFLIFKG 90
G NFG + TH FIYF L + L+FK
Sbjct: 59 GRNFGSYVTHETKHFIYFYLGQVAILLFKS 88
>sp|Q9D0M5|DYL2_MOUSE Dynein light chain 2, cytoplasmic OS=Mus musculus GN=Dynll2 PE=1
SV=1
Length = 89
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Query: 1 MLEGKALIEDTDMPVKMQLYAMASASQALDVYDVFDCKSIAAHIKKEFDKRYGGGWQCVV 60
M + KA+I++ DM MQ A+ A+QA++ Y++ K IAA+IKKEFDK+Y W C+V
Sbjct: 1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIE--KDIAAYIKKEFDKKYNPTWHCIV 58
Query: 61 GSNFGCFFTHTEGTFIYFQLETLKFLIFKG 90
G NFG + TH FIYF L + L+FK
Sbjct: 59 GRNFGSYVTHETKHFIYFYLGQVAILLFKS 88
>sp|Q96FJ2|DYL2_HUMAN Dynein light chain 2, cytoplasmic OS=Homo sapiens GN=DYNLL2 PE=1
SV=1
Length = 89
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Query: 1 MLEGKALIEDTDMPVKMQLYAMASASQALDVYDVFDCKSIAAHIKKEFDKRYGGGWQCVV 60
M + KA+I++ DM MQ A+ A+QA++ Y++ K IAA+IKKEFDK+Y W C+V
Sbjct: 1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIE--KDIAAYIKKEFDKKYNPTWHCIV 58
Query: 61 GSNFGCFFTHTEGTFIYFQLETLKFLIFKG 90
G NFG + TH FIYF L + L+FK
Sbjct: 59 GRNFGSYVTHETKHFIYFYLGQVAILLFKS 88
>sp|Q3MHR3|DYL2_BOVIN Dynein light chain 2, cytoplasmic OS=Bos taurus GN=DYNLL2 PE=3
SV=1
Length = 89
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Query: 1 MLEGKALIEDTDMPVKMQLYAMASASQALDVYDVFDCKSIAAHIKKEFDKRYGGGWQCVV 60
M + KA+I++ DM MQ A+ A+QA++ Y++ K IAA+IKKEFDK+Y W C+V
Sbjct: 1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIE--KDIAAYIKKEFDKKYNPTWHCIV 58
Query: 61 GSNFGCFFTHTEGTFIYFQLETLKFLIFKG 90
G NFG + TH FIYF L + L+FK
Sbjct: 59 GRNFGSYVTHETKHFIYFYLGQVAILLFKS 88
>sp|O96860|DYL2_DROME Dynein light chain 2, cytoplasmic OS=Drosophila melanogaster
GN=Cdlc2 PE=3 SV=1
Length = 89
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Query: 1 MLEGKALIEDTDMPVKMQLYAMASASQALDVYDVFDCKSIAAHIKKEFDKRYGGGWQCVV 60
M + KA+I++ DM +MQ A+ A+QAL+ Y++ K IAA IKKEFDK+Y W C+V
Sbjct: 1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNI--EKDIAAFIKKEFDKKYNPTWHCIV 58
Query: 61 GSNFGCFFTHTEGTFIYFQLETLKFLIFKG 90
G NFG + TH FIYF L + L+FK
Sbjct: 59 GRNFGSYVTHETRHFIYFYLGQVAILLFKS 88
>sp|Q94758|DYL1_SCHMA Dynein light chain OS=Schistosoma mansoni GN=DLC PE=1 SV=1
Length = 89
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
Query: 1 MLEGKALIEDTDMPVKMQLYAMASASQALDVYDVFDCKSIAAHIKKEFDKRYGGGWQCVV 60
M E KA+I++ DM +MQ A+ A+ A+D +D+ K IAA+IKK+FD++Y W C+V
Sbjct: 1 MSERKAVIKNADMSEEMQEDAIHIAAGAIDKHDL--EKDIAANIKKDFDRKYHPTWHCIV 58
Query: 61 GSNFGCFFTHTEGTFIYFQLETLKFLIFKG 90
G +FG + TH FIYF L+ FL+FK
Sbjct: 59 GRHFGSYVTHETHNFIYFYLDDRAFLLFKS 88
>sp|Q39580|DYL1_CHLRE Dynein 8 kDa light chain, flagellar outer arm OS=Chlamydomonas
reinhardtii PE=1 SV=1
Length = 91
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
Query: 5 KALIEDTDMPVKMQLYAMASASQALDVYDVFDCKSIAAHIKKEFDKRYGGGWQCVVGSNF 64
KA+I++ DM +MQ A+ A+QAL+ Y++ K IAA+IKKEFD+++ W C+VG NF
Sbjct: 7 KAVIKNADMSEEMQADAVDCATQALEKYNIE--KDIAAYIKKEFDRKHNPTWHCIVGRNF 64
Query: 65 GCFFTHTEGTFIYFQLETLKFLIFK 89
G + TH FIYF L + L+FK
Sbjct: 65 GSYVTHETKHFIYFYLGQVAILLFK 89
>sp|Q9UR05|DYL1_SCHPO Dynein light chain 1, cytoplasmic OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dlc2 PE=3 SV=1
Length = 85
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 6 ALIEDTDMPVKMQLYAMASASQALDVYDVFDCKSIAAHIKKEFDKRYGGGWQCVVGSNFG 65
A+I+ DM KMQ A+ +A QA++ + + K IAA IK+EFDK++ W C+VG NFG
Sbjct: 2 AVIKAVDMSEKMQQEAIHAAVQAMEKFTI--EKDIAAFIKREFDKKFSPTWHCIVGRNFG 59
Query: 66 CFFTHTEGTFIYFQLETLKFLIFKG 90
F TH FIYF L T+ FL+FK
Sbjct: 60 SFVTHESRHFIYFYLGTVAFLLFKS 84
>sp|O94111|DYL1_EMENI Dynein light chain, cytoplasmic OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=nudG PE=3 SV=1
Length = 94
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 8 IEDTDMPVKMQLYAMASASQALDVYDVFDCKSIAAHIKKEFDKRYGGGWQCVVGSNFGCF 67
I+ DM MQ A+ A +A++ Y + K IA +IK+EFD R G W CVVG NFG F
Sbjct: 13 IKSVDMSEDMQQEAVEVAIEAMEKYHIE--KDIAQYIKREFDSRKGATWHCVVGRNFGSF 70
Query: 68 FTHTEGTFIYFQLETLKFLIFK 89
TH FIYF L L+FK
Sbjct: 71 VTHETKHFIYFYLGHCAILLFK 92
>sp|Q6BZF8|DYL1_DEBHA Dynein light chain 1, cytoplasmic OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=DYN2 PE=3 SV=1
Length = 91
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Query: 3 EGKALIEDTDMPVKMQLYAMASASQALDVYDVFDCKSIAAHIKKEFDKRYGGGWQCVVGS 62
E + +++ +D+P +MQ +++A+ Y + K IA ++KKE D+ YG W +VG
Sbjct: 5 EQEPILKASDLPEEMQTRIFELSNEAVSNYKI--EKDIATYLKKELDQLYGATWHVIVGK 62
Query: 63 NFGCFFTHTEGTFIYFQLETLKFLIFK 89
+FG + TH +G F YF + L FLIFK
Sbjct: 63 SFGSYVTHEQGFFTYFYIGQLAFLIFK 89
>sp|Q02647|DYL1_YEAST Dynein light chain 1, cytoplasmic OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DYN2 PE=1 SV=1
Length = 92
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 7 LIEDTDMPVKMQLYAMASASQALDVYDVFDCKSIAAHIKKEFDKRYGGGWQCVVGSNFGC 66
+++ +D+ K++ + + ALD Y + + IA +KK+ D +YG W +VG NFG
Sbjct: 10 IVKASDITDKLKEDILTISKDALDKYQL--ERDIAGTVKKQLDVKYGNTWHVIVGKNFGS 67
Query: 67 FFTHTEGTFIYFQLETLKFLIFK 89
+ TH +G F+YF + L FL+FK
Sbjct: 68 YVTHEKGHFVYFYIGPLAFLVFK 90
>sp|Q86A88|DYL_DICDI Dynein light chain, cytoplasmic OS=Dictyostelium discoideum
GN=dlcB PE=3 SV=1
Length = 91
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 8 IEDTDMPVKMQLYAMASASQALDVYDVFDCKSIAAHIKKEFDKRYGGGWQCVVGSNFGCF 67
+++ DMP MQ A +A + ++ + IA IKKEFDK+Y W C+VG +FG F
Sbjct: 10 VKNADMPDFMQQDATECTIKAFEETNI--ERDIAMIIKKEFDKKYSPTWHCIVGKSFGSF 67
Query: 68 FTHTEGTFIYFQLETLKFLIFKG 90
TH FIYF + L+FK
Sbjct: 68 VTHETKNFIYFNINKHSVLLFKA 90
>sp|Q759T0|DYL1_ASHGO Dynein light chain 1, cytoplasmic OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DYN2
PE=3 SV=1
Length = 88
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Query: 6 ALIEDTDMPVKMQLYAMASASQALDVYDVFDCKSIAAHIKKEFDKRYGGGWQCVVGSNFG 65
A+++ +D+ +++ + QA++ + + + +AA+IKKE D ++G W +VG NFG
Sbjct: 5 AILKASDITDELRDEIFGISVQAVEQFQL--EREVAAYIKKELDSKHGQTWHVIVGKNFG 62
Query: 66 CFFTHTEGTFIYFQLETLKFLIFK 89
+ TH +G FIYF + L FL+FK
Sbjct: 63 SYVTHEKGHFIYFYIGPLAFLVFK 86
>sp|Q6FUJ0|DYL1_CANGA Dynein light chain 1, cytoplasmic OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DYN2 PE=3 SV=1
Length = 86
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 5 KALIEDTDMPVKMQLYAMASASQALDVYDVFDCKSIAAHIKKEFDKRYGGGWQCVVGSNF 64
+ +++ +DM +MQ A +A+ + + + IA+ IKKE D RYG W +VG +F
Sbjct: 3 QVIVKASDMGDEMQQEVFRIAEEAMREHTL--EREIASVIKKEMDSRYGHTWHVIVGRSF 60
Query: 65 GCFFTHTEGTFIYFQLETLKFLIFK 89
G + TH +G F+YF + L L+FK
Sbjct: 61 GSYVTHEKGKFVYFYVGPLALLVFK 85
>sp|Q6CWX4|DYL1_KLULA Dynein light chain 1, cytoplasmic OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DYN2 PE=3 SV=1
Length = 87
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 38 KSIAAHIKKEFDKRYGGGWQCVVGSNFGCFFTHTEGTFIYFQLETLKFLIFK 89
+ IAA+IKK+ D G W +VG NFG + TH +G F+YF + L FL+FK
Sbjct: 34 REIAAYIKKQLDVSQGETWHVIVGKNFGSYVTHEKGYFVYFYIGPLAFLVFK 85
>sp|Q21557|DYL2_CAEEL Probable dynein light chain 2, cytoplasmic OS=Caenorhabditis
elegans GN=dlc-2 PE=3 SV=2
Length = 90
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 1 MLEGKALIEDTDMPVKMQLYAMASASQALDVYDVFDCKSIAAHIKKEFDKRYGGGWQCVV 60
M E K +++TDM + ++ +A +Y++ K +AA +K+E DK++G W +
Sbjct: 1 MSEEKIEVKETDMEDPQRDMVISVVREAQRLYNID--KDVAAFVKEELDKKFGATWHVIC 58
Query: 61 GSNFGCFFTHTEGTFIYFQLETLKFLIFK 89
G FG ++ G FI + + +I+K
Sbjct: 59 GKCFGSRVSYEMGHFILLKCNKVNVMIYK 87
>sp|Q39579|DYL2_CHLRE Dynein 11 kDa light chain, flagellar outer arm OS=Chlamydomonas
reinhardtii PE=1 SV=1
Length = 120
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 13 MPVKMQLYAMASASQALDVYDVFDCKSIAAHIKKEFDKRYGGG-------WQCVVGSNFG 65
MP + A+ A A+D Y K IA +IK E+DK+Y G + C+VG +F
Sbjct: 28 MPESFEQDAVQIALIAVDKYR--QLKDIAFYIKHEYDKKYPGSGKATEGVYHCIVGKSFA 85
Query: 66 CFFTHTEGTFIYFQLETLKFLIFKGSSSP 94
+H FI+ +++T +++K +P
Sbjct: 86 SAVSHETRQFIHMKVDTYHVILWKSKDTP 114
>sp|Q9DCM4|DNAL4_MOUSE Dynein light chain 4, axonemal OS=Mus musculus GN=Dnal4 PE=2 SV=2
Length = 105
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 7 LIEDTDMPVKMQLYAMASASQALDVYDVFDCKSIAAHIKKEFDKRYGGGWQCVVGSNFGC 66
L+ +DMP +M++ M A + + + +S A IK+ DK++G W V+G FG
Sbjct: 21 LVRHSDMPEEMRVETMELCVTACEKFSNNN-ESAAKMIKETMDKKFGSSWHVVIGEGFGF 79
Query: 67 FFTHTEGTFIYF 78
TH +Y
Sbjct: 80 EITHEVKNLLYL 91
>sp|A4F4L4|DNAL4_PIG Dynein light chain 4, axonemal OS=Sus scrofa GN=DNAL4 PE=3 SV=1
Length = 105
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 7 LIEDTDMPVKMQLYAMASASQALDVYDVFDCKSIAAHIKKEFDKRYGGGWQCVVGSNFGC 66
L+ +DMP +M++ M A + + + +S A IK+ DK++G W V+G FG
Sbjct: 21 LVRHSDMPEEMRVETMELCVTACEKFSNNN-ESAAKMIKETMDKKFGSSWHVVIGEGFGF 79
Query: 67 FFTHTEGTFIYF 78
TH +Y
Sbjct: 80 EITHEVKNLLYL 91
>sp|O96015|DNAL4_HUMAN Dynein light chain 4, axonemal OS=Homo sapiens GN=DNAL4 PE=2 SV=1
Length = 105
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 7 LIEDTDMPVKMQLYAMASASQALDVYDVFDCKSIAAHIKKEFDKRYGGGWQCVVGSNFGC 66
L+ +DMP +M++ M A + + + +S A IK+ DK++G W V+G FG
Sbjct: 21 LVRHSDMPEEMRVETMELCVTACEKFSNNN-ESAAKMIKETMDKKFGSSWHVVIGEGFGF 79
Query: 67 FFTHTEGTFIYF 78
TH +Y
Sbjct: 80 EITHEVKNLLYL 91
>sp|Q32KN5|DNAL4_BOVIN Dynein light chain 4, axonemal OS=Bos taurus GN=DNAL4 PE=3 SV=1
Length = 105
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 7 LIEDTDMPVKMQLYAMASASQALDVYDVFDCKSIAAHIKKEFDKRYGGGWQCVVGSNFGC 66
L+ +DMP +M++ M A + + + +S A IK+ DK++G W V+G FG
Sbjct: 21 LVRHSDMPEEMRVETMELCVTACEKFSNNN-ESAAKMIKETMDKKFGSSWHVVIGEGFGF 79
Query: 67 FFTHTEGTFIYF 78
TH +Y
Sbjct: 80 EITHEVKNLLYL 91
>sp|Q8A7Z4|HIS5_BACTN Imidazole glycerol phosphate synthase subunit HisH OS=Bacteroides
thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC
10582 / E50 / VPI-5482) GN=hisH PE=3 SV=1
Length = 196
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Query: 7 LIEDTDMPV-----KMQLYAMASASQALDVYDVFDCKSIAAHIKKEFDKRYGGGWQCVVG 61
LI++ PV MQL S +D ++FD +K DK GW +
Sbjct: 65 LIKNLRQPVFGICLGMQLMCRHSEEGEVDCLNIFDVDVKRFVPQKHEDKVPHMGWNTIGK 124
Query: 62 SNFGCFFTHTEGTFIYF 78
+N F TE F+YF
Sbjct: 125 TNSKLFEGFTEEEFVYF 141
>sp|O00936|MYOB_TOXGO Myosin-B/C OS=Toxoplasma gondii PE=2 SV=4
Length = 1171
Score = 29.6 bits (65), Expect = 6.0, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 38 KSIAAHIKKEFDKRYGGGWQCVVGS--NFGCFFTHTEGTF 75
++I I+ + D+ YG WQ ++ NFG TH G+
Sbjct: 961 QNICTVIRNDMDQHYGFFWQVIINRTPNFGMAATHIHGSL 1000
>sp|O14040|DIS3L_SCHPO Dis3-like exonuclease C2C4.07c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAC2C4.07c PE=3 SV=1
Length = 927
Score = 28.9 bits (63), Expect = 10.0, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 25/46 (54%)
Query: 3 EGKALIEDTDMPVKMQLYAMASASQALDVYDVFDCKSIAAHIKKEF 48
E K +++ MP K ++Y A+ ++ + + +S+A HI K F
Sbjct: 624 ELKFQLDEYGMPNKCEVYEQTDANHLIEEFMLLANRSVAEHISKNF 669
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,728,933
Number of Sequences: 539616
Number of extensions: 1346292
Number of successful extensions: 2225
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2171
Number of HSP's gapped (non-prelim): 37
length of query: 99
length of database: 191,569,459
effective HSP length: 68
effective length of query: 31
effective length of database: 154,875,571
effective search space: 4801142701
effective search space used: 4801142701
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)