BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034282
MPYKEMAGHCEALLIGKQKKMSHLMSAQLRQESLINFSITNHENEVDNPLTDERITPNSN
KPPVGTVTTQCASEYQHHPQYFRLPASSPYDNFLKAAGC

High Scoring Gene Products

Symbol, full name Information P value
AT2G41830 protein from Arabidopsis thaliana 1.6e-21
AT5G21080 protein from Arabidopsis thaliana 2.2e-11
AT1G05960 protein from Arabidopsis thaliana 1.8e-09

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034282
        (99 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2054416 - symbol:AT2G41830 species:3702 "Arabi...   165  1.6e-21   2
TAIR|locus:2178953 - symbol:AT5G21080 "AT5G21080" species...   169  2.2e-11   1
TAIR|locus:2198846 - symbol:AT1G05960 "AT1G05960" species...   151  1.8e-09   1


>TAIR|locus:2054416 [details] [associations]
            symbol:AT2G41830 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=IDA] InterPro:IPR016024
            GO:GO:0005886 EMBL:CP002685 SUPFAM:SSF48371 Gene3D:1.25.10.10
            InterPro:IPR011989 IPI:IPI00546832 RefSeq:NP_181714.3
            UniGene:At.43552 ProteinModelPortal:F4ILW4 PRIDE:F4ILW4
            EnsemblPlants:AT2G41830.1 GeneID:818782 KEGG:ath:AT2G41830
            OMA:VLKNEGH Uniprot:F4ILW4
        Length = 1025

 Score = 165 (63.1 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
 Identities = 31/54 (57%), Positives = 39/54 (72%)

Query:    46 VDNPLTDERITPNSNKPPVGTVTTQCASEYQHHPQYFRLPASSPYDNFLKAAGC 99
             V+ PL  +     S + PVGT+ + C +E Q++PQ FRLPASSPYDNFLKAAGC
Sbjct:   972 VEVPLLSKEFDMKSPRTPVGTIQSPCYAELQNNPQAFRLPASSPYDNFLKAAGC 1025

 Score = 127 (49.8 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
 Identities = 24/44 (54%), Positives = 33/44 (75%)

Query:     3 YKEMAGHCEALLIGKQKKMSHLMSAQLRQESLINFSITNHENEV 46
             YKEM  HCE LL+GKQ+K+S L+++QLR ES +N S   H+ E+
Sbjct:   912 YKEMTLHCENLLMGKQQKISSLLNSQLRHESSVNCSPRQHDEEI 955


>TAIR|locus:2178953 [details] [associations]
            symbol:AT5G21080 "AT5G21080" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 IPI:IPI00532720 RefSeq:NP_197607.5
            UniGene:At.54937 ProteinModelPortal:F4K6Z1 SMR:F4K6Z1 PRIDE:F4K6Z1
            EnsemblPlants:AT5G21080.1 GeneID:832232 KEGG:ath:AT5G21080
            OMA:NICVTEY PhylomeDB:F4K6Z1 Uniprot:F4K6Z1
        Length = 1025

 Score = 169 (64.5 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 37/96 (38%), Positives = 51/96 (53%)

Query:     1 MPYKEMAGHCEALLIGKQKKMSHLMSAQLRQESLINFSITNHENEVDNPLTDERITPNSN 60
             M Y EMAGHCEALL+GKQ+KMS + +   +  S              NP  D+R +    
Sbjct:   923 MTYTEMAGHCEALLMGKQEKMSFMSAKSNKFSSSQTKEAVALPCSGGNPFVDQRSSWEMM 982

Query:    61 KPPVGTVTTQCASEYQHHPQYFRLPASSPYDNFLKA 96
                    +  C +EYQ+ P +F  P+S+P+DNFL A
Sbjct:   983 GLGAPAASNICVTEYQNQPPFFNPPSSTPFDNFLTA 1018


>TAIR|locus:2198846 [details] [associations]
            symbol:AT1G05960 "AT1G05960" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0005886
            "plasma membrane" evidence=IDA] InterPro:IPR016024 EMBL:CP002684
            GO:GO:0005886 SUPFAM:SSF48371 IPI:IPI00939004 RefSeq:NP_001154308.1
            UniGene:At.15457 UniGene:At.67052 PRIDE:F4IAF6
            EnsemblPlants:AT1G05960.2 GeneID:837106 KEGG:ath:AT1G05960
            OMA:MKSQCEA Uniprot:F4IAF6
        Length = 1003

 Score = 151 (58.2 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 44/106 (41%), Positives = 56/106 (52%)

Query:     1 MPYKEMAGHCEALLIGKQKKMSHLMSAQLRQESLINFSITNHENEVDNPL----TDERIT 56
             +PY +M   CEAL+ GKQ+KMS L S + +       +IT+ +NE D       T+E   
Sbjct:   902 VPYDQMMNQCEALVTGKQQKMSVLRSFKPQATK----AITSEDNEKDEQYLLKETEEAGE 957

Query:    57 PNSNKPPVGTVTTQCASEY--QHHPQY-FRLPASSPYDNFLKAAGC 99
              +     V  V  Q    +  Q  PQ  FRLP SSPYD FLKAAGC
Sbjct:   958 DDEKAIIVADVQPQGQLGFFSQEVPQNSFRLPPSSPYDKFLKAAGC 1003


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.129   0.387    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       99        99   0.00091  102 3  11 23  0.42    30
                                                     29  0.46    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  527 (56 KB)
  Total size of DFA:  115 KB (2077 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.18u 0.14s 12.32t   Elapsed:  00:00:01
  Total cpu time:  12.18u 0.14s 12.32t   Elapsed:  00:00:01
  Start:  Fri May 10 20:05:39 2013   End:  Fri May 10 20:05:40 2013

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