Query 034282
Match_columns 99
No_of_seqs 51 out of 53
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 20:16:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034282.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034282hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sjl_A Methylamine utilization 43.2 6.5 0.00022 31.4 0.7 13 84-96 169-181 (373)
2 2jxc_B Stonin-2, stoned B; end 35.1 24 0.00082 20.5 2.1 13 46-58 16-28 (45)
3 4aan_A Cytochrome C551 peroxid 31.4 14 0.00048 29.0 0.9 13 84-96 181-193 (341)
4 2f73_A L-FABP, fatty acid-bind 28.6 14 0.0005 25.7 0.4 17 82-98 29-45 (149)
5 3p6d_A Fatty acid-binding prot 26.4 15 0.00051 25.2 0.2 16 83-98 17-32 (139)
6 3hq9_A Cytochrome C551 peroxid 26.4 20 0.00067 28.3 0.9 12 85-96 187-198 (345)
7 3q6l_A Fatty acid-binding prot 24.6 17 0.00057 25.5 0.2 17 82-98 29-45 (152)
8 3rsw_A Fatty acid-binding prot 24.1 20 0.00067 25.4 0.4 17 82-98 34-50 (158)
9 2d99_A Muscle, general transcr 22.4 34 0.0012 22.6 1.3 16 84-99 28-43 (90)
10 4a60_A Fatty acid-binding prot 21.4 21 0.00072 25.0 0.2 17 82-98 31-47 (154)
No 1
>3sjl_A Methylamine utilization protein MAUG; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 3sle_A* 3svw_A* 3sxt_A* 3l4o_A* 3pxs_A* 3pxt_A* 3pxw_A* 3l4m_A* 3sws_A* 3orv_A* 3rmz_A* 3rlm_A* 3rn0_A* 3rn1_A*
Probab=43.17 E-value=6.5 Score=31.41 Aligned_cols=13 Identities=31% Similarity=0.621 Sum_probs=11.2
Q ss_pred CCCCCcchhhhhc
Q 034282 84 LPASSPYDNFLKA 96 (99)
Q Consensus 84 LP~sSPYDnFLKA 96 (99)
.|+.||||.||+.
T Consensus 169 ~~~~S~fD~yl~G 181 (373)
T 3sjl_A 169 SPFDSKYDRVMRG 181 (373)
T ss_dssp CCCCSHHHHHHTT
T ss_pred CCCCCchhHHhCC
Confidence 3889999999974
No 2
>2jxc_B Stonin-2, stoned B; endocytosis, calcium, chromosomal rearrangement, cytoplasm, membrane, phosphorylation, polymorphism, proto-oncogene; NMR {Homo sapiens}
Probab=35.09 E-value=24 Score=20.54 Aligned_cols=13 Identities=23% Similarity=0.455 Sum_probs=10.7
Q ss_pred CCCCCCCCCCCCC
Q 034282 46 VDNPLTDERITPN 58 (99)
Q Consensus 46 ~~Np~~~~~~~~~ 58 (99)
-+|||+|+.+...
T Consensus 16 atNPFLde~l~dv 28 (45)
T 2jxc_B 16 ATNPFLNETLQDV 28 (45)
T ss_dssp SSCSSSSTTTSCC
T ss_pred cCCcchhhhHHhC
Confidence 7899999998654
No 3
>4aan_A Cytochrome C551 peroxidase; oxidoreductase, multiheme cytochromes, conformational rearra; HET: HEC; 1.22A {Geobacter sulfurreducens} PDB: 4aam_A* 4aal_A* 4aao_A*
Probab=31.45 E-value=14 Score=28.98 Aligned_cols=13 Identities=31% Similarity=0.892 Sum_probs=10.6
Q ss_pred CCCCCcchhhhhc
Q 034282 84 LPASSPYDNFLKA 96 (99)
Q Consensus 84 LP~sSPYDnFLKA 96 (99)
+++.||||.||+.
T Consensus 181 ~s~~S~fD~~l~G 193 (341)
T 4aan_A 181 VTPDAPFDKYLKG 193 (341)
T ss_dssp CCCCCHHHHHHTT
T ss_pred cCCccHHHHHhcc
Confidence 4678999999974
No 4
>2f73_A L-FABP, fatty acid-binding protein, liver; structural genomics, structural genomics consortium, SGC, lipid binding protein; 2.50A {Homo sapiens} SCOP: b.60.1.2
Probab=28.57 E-value=14 Score=25.69 Aligned_cols=17 Identities=29% Similarity=0.778 Sum_probs=12.5
Q ss_pred ccCCCCCcchhhhhccC
Q 034282 82 FRLPASSPYDNFLKAAG 98 (99)
Q Consensus 82 frLP~sSPYDnFLKAAG 98 (99)
.||=-|==||.||||.|
T Consensus 29 wkl~ssENfdeylkalG 45 (149)
T 2f73_A 29 YQLQSQENFEAFMKAIG 45 (149)
T ss_dssp EEEEEEECHHHHHHHTT
T ss_pred EEEecCcCHHHHHHHcC
Confidence 34444556999999988
No 5
>3p6d_A Fatty acid-binding protein, adipocyte; lipocalin, beta barrel, lipid BI protein; HET: ZGB; 1.06A {Homo sapiens} SCOP: b.60.1.2 PDB: 3p6c_A* 3p6e_A* 3p6f_A* 3p6g_A* 3p6h_A* 3rzy_A 2hnx_A* 3fr4_A* 2nnq_A* 1tow_A* 1tou_A* 3fr2_A* 3fr5_A* 1adl_A* 1alb_A 1lib_A 1lic_A* 1lid_A* 1lie_A* 1lif_A* ...
Probab=26.39 E-value=15 Score=25.21 Aligned_cols=16 Identities=31% Similarity=0.777 Sum_probs=11.8
Q ss_pred cCCCCCcchhhhhccC
Q 034282 83 RLPASSPYDNFLKAAG 98 (99)
Q Consensus 83 rLP~sSPYDnFLKAAG 98 (99)
||=-|==||.||||.|
T Consensus 17 kl~ssENfdeymkalG 32 (139)
T 3p6d_A 17 KLVSSENFDDYMKEVG 32 (139)
T ss_dssp EEEEEESHHHHHHHHT
T ss_pred EEEeccCHHHHHHHhC
Confidence 3334556999999987
No 6
>3hq9_A Cytochrome C551 peroxidase; oxidoreductase; HET: HEM; 1.52A {Geobacter sulfurreducens} PDB: 3hq6_A* 3hq8_A* 3hq7_A*
Probab=26.35 E-value=20 Score=28.33 Aligned_cols=12 Identities=42% Similarity=0.944 Sum_probs=10.1
Q ss_pred CCCCcchhhhhc
Q 034282 85 PASSPYDNFLKA 96 (99)
Q Consensus 85 P~sSPYDnFLKA 96 (99)
++.||||.||+.
T Consensus 187 s~~S~fD~~l~G 198 (345)
T 3hq9_A 187 TPDSPFDQYLKG 198 (345)
T ss_dssp CCCCHHHHHHTT
T ss_pred CCCCchhHHhcC
Confidence 668999999974
No 7
>3q6l_A Fatty acid-binding protein, adipocyte; lipid chaperone, lipid binding protein; 1.40A {Homo sapiens} PDB: 2q9s_A* 2qm9_A*
Probab=24.57 E-value=17 Score=25.48 Aligned_cols=17 Identities=29% Similarity=0.802 Sum_probs=12.6
Q ss_pred ccCCCCCcchhhhhccC
Q 034282 82 FRLPASSPYDNFLKAAG 98 (99)
Q Consensus 82 frLP~sSPYDnFLKAAG 98 (99)
.||=-+==||.||||.|
T Consensus 29 wkl~ssENfdeymkalG 45 (152)
T 3q6l_A 29 WKLVSSENFDDYMKEVG 45 (152)
T ss_dssp EEEEEEESHHHHHHHHT
T ss_pred EEEEeccCHHHHHHHhC
Confidence 44444567999999987
No 8
>3rsw_A Fatty acid-binding protein, heart; lipid carrier, molecular chaperone, heart fatty acid binding type 2 diabetes, atherosclerosis, chaperone; 2.60A {Homo sapiens} PDB: 1g5w_A 1hmr_A* 1hms_A* 1hmt_A* 2hmb_A* 1bwy_A
Probab=24.10 E-value=20 Score=25.37 Aligned_cols=17 Identities=29% Similarity=0.769 Sum_probs=13.0
Q ss_pred ccCCCCCcchhhhhccC
Q 034282 82 FRLPASSPYDNFLKAAG 98 (99)
Q Consensus 82 frLP~sSPYDnFLKAAG 98 (99)
.||=-+-=||.||||.|
T Consensus 34 wkl~ssENfdeymkalG 50 (158)
T 3rsw_A 34 WKLVDSKNFDDYMKSLG 50 (158)
T ss_dssp EEEEEEESHHHHHHHTT
T ss_pred EEEEeccCHHHHHHHhC
Confidence 44545667999999988
No 9
>2d99_A Muscle, general transcription factor II-I repeat domain- containing protein 1; structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.40 E-value=34 Score=22.60 Aligned_cols=16 Identities=25% Similarity=0.563 Sum_probs=12.1
Q ss_pred CCCCCcchhhhhccCC
Q 034282 84 LPASSPYDNFLKAAGC 99 (99)
Q Consensus 84 LP~sSPYDnFLKAAGC 99 (99)
=|+--||++||+--+|
T Consensus 28 ~pv~VPY~k~l~~P~~ 43 (90)
T 2d99_A 28 SVVPLPYERLLREPGL 43 (90)
T ss_dssp SCCCCCHHHHHHCTTT
T ss_pred CcccCCHHHHhcCCcc
Confidence 3677899999986543
No 10
>4a60_A Fatty acid-binding protein 9 testis lipid-binding protein, TLBP, testis-type fatty...; transport protein; 1.53A {Homo sapiens} PDB: 3nr3_A*
Probab=21.43 E-value=21 Score=25.05 Aligned_cols=17 Identities=24% Similarity=0.737 Sum_probs=12.4
Q ss_pred ccCCCCCcchhhhhccC
Q 034282 82 FRLPASSPYDNFLKAAG 98 (99)
Q Consensus 82 frLP~sSPYDnFLKAAG 98 (99)
.||=-+==||.||||.|
T Consensus 31 wkl~ssENfdeymkalG 47 (154)
T 4a60_A 31 WKLVSSENFEDYMKELG 47 (154)
T ss_dssp EEEEEEESHHHHHHHHT
T ss_pred EEEEeccCHHHHHHHhC
Confidence 34444566999999987
Done!