BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034283
MSRGGSYGGGQSSLGYLFGSEEKPAAPPAPQTVSLPPYGIDTTTEKPQDNQAPNKPNVSN
NYHRAQGQNTGNFITDRPSTKVKSVPGGDSSLGYLFGDK

High Scoring Gene Products

Symbol, full name Information P value
SP1L5
AT4G23496
protein from Arabidopsis thaliana 2.6e-22
SP1L2
AT1G69230
protein from Arabidopsis thaliana 3.8e-14
SP1L1
SPIRAL1-like1
protein from Arabidopsis thaliana 9.1e-13
SPR1
AT2G03680
protein from Arabidopsis thaliana 2.4e-12
SP1L4
AT5G15600
protein from Arabidopsis thaliana 2.4e-12
SP1L3
AT3G02180
protein from Arabidopsis thaliana 3.9e-12

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034283
        (99 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006517 - symbol:SP1L5 "AT4G23496" species:3...   259  2.6e-22   1
TAIR|locus:2026441 - symbol:SP1L2 "AT1G69230" species:370...   182  3.8e-14   1
TAIR|locus:4515102592 - symbol:SP1L1 "SPIRAL1-like1" spec...   169  9.1e-13   1
TAIR|locus:2044224 - symbol:SPR1 "AT2G03680" species:3702...   165  2.4e-12   1
TAIR|locus:2180902 - symbol:SP1L4 "AT5G15600" species:370...   165  2.4e-12   1
TAIR|locus:2076537 - symbol:SP1L3 "AT3G02180" species:370...   163  3.9e-12   1


>TAIR|locus:505006517 [details] [associations]
            symbol:SP1L5 "AT4G23496" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005874
            EMBL:AL031326 EMBL:AL161559 HOGENOM:HOG000240966 EMBL:BT003955
            EMBL:BT005054 EMBL:AY084337 IPI:IPI00524864 RefSeq:NP_567685.1
            UniGene:At.32424 PRIDE:Q8LGD1 EnsemblPlants:AT4G23496.1
            GeneID:828449 KEGG:ath:AT4G23496 TAIR:At4g23496 eggNOG:NOG261539
            InParanoid:Q8LGD1 OMA:YGVDSTE PhylomeDB:Q8LGD1
            ProtClustDB:CLSN2689576 Genevestigator:Q8LGD1 Uniprot:Q8LGD1
        Length = 99

 Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
 Identities = 51/77 (66%), Positives = 60/77 (77%)

Query:    24 PAAPPAPQTVSLPPYGIDTTTEKPQDNQAPNKPNVSNN-YHRAQGQNTGNFITDRPSTKV 82
             PA P AP+    PPYG+D+T E   D++A  KP +SNN Y R QGQN+GNF+TDRP+TKV
Sbjct:    28 PAPPVAPKPA--PPYGVDSTEE---DHEADQKPKISNNNYQRVQGQNSGNFVTDRPTTKV 82

Query:    83 KSVPGGDSSLGYLFGDK 99
             KSVPGG SSLGYLFGDK
Sbjct:    83 KSVPGGGSSLGYLFGDK 99


>TAIR|locus:2026441 [details] [associations]
            symbol:SP1L2 "AT1G69230" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 EMBL:AC008262 EMBL:AC018364
            GO:GO:0005874 eggNOG:NOG241790 EMBL:BT024676 EMBL:AY087016
            IPI:IPI00523518 PIR:C96716 RefSeq:NP_177083.1 RefSeq:NP_974110.1
            UniGene:At.35439 PRIDE:Q9LE54 EnsemblPlants:AT1G69230.1
            EnsemblPlants:AT1G69230.2 GeneID:843254 KEGG:ath:AT1G69230
            TAIR:At1g69230 InParanoid:Q9LE54 OMA:SIKQVPA PhylomeDB:Q9LE54
            ProtClustDB:CLSN2682526 Genevestigator:Q9LE54 Uniprot:Q9LE54
        Length = 110

 Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
 Identities = 40/76 (52%), Positives = 48/76 (63%)

Query:    22 EKPAAPPAPQTVSLPPYGIDTTTEKPQDNQAPNKPNVSNNYHRAQGQNTGNFITDRPSTK 81
             E  ++  AP T +     +D+  + P    A    N +NNY RA+GQNTGNFITDRPSTK
Sbjct:    35 ETESSAHAPPTQAAAANAVDSIKQVP----AGLNSNSANNYMRAEGQNTGNFITDRPSTK 90

Query:    82 VKSVPGGDSSLGYLFG 97
             V S PGG SSL YLFG
Sbjct:    91 VHSAPGGGSSLDYLFG 106


>TAIR|locus:4515102592 [details] [associations]
            symbol:SP1L1 "SPIRAL1-like1" species:3702 "Arabidopsis
            thaliana" [GO:0005886 "plasma membrane" evidence=ISM] EMBL:CP002684
            GenomeReviews:CT485782_GR EMBL:AC013427 GO:GO:0005874
            IPI:IPI00891450 PIR:C86390 RefSeq:NP_001117356.1 UniGene:At.73864
            EnsemblPlants:AT1G26355.1 GeneID:6240366 KEGG:ath:AT1G26355
            TAIR:At1g26355 eggNOG:NOG241790 HOGENOM:HOG000240966 OMA:HGNLANN
            PhylomeDB:B3H4F1 Genevestigator:B3H4F1 Uniprot:B3H4F1
        Length = 113

 Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
 Identities = 38/73 (52%), Positives = 49/73 (67%)

Query:    25 AAPPAPQTVSLPPYGIDTTTEKPQDNQAPNKPNVSNNYHRAQGQNTGNFITDRPSTKVKS 84
             +A P+P+ V+     ++ T + P      NK + +NNY RA GQNTGNF+TDRPSTKV +
Sbjct:    42 SADPSPKHVAAQT--VNVTKQIPA---GINKSS-TNNYIRADGQNTGNFLTDRPSTKVHA 95

Query:    85 VPGGDSSLGYLFG 97
              PGG SSL YLFG
Sbjct:    96 APGGGSSLDYLFG 108


>TAIR|locus:2044224 [details] [associations]
            symbol:SPR1 "AT2G03680" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009826
            "unidimensional cell growth" evidence=IMP] [GO:0055028 "cortical
            microtubule" evidence=IDA] [GO:0005876 "spindle microtubule"
            evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA] [GO:0009574
            "preprophase band" evidence=IDA] [GO:0010005 "cortical microtubule,
            transverse to long axis" evidence=IDA] [GO:0051211 "anisotropic
            cell growth" evidence=IMP] [GO:0043622 "cortical microtubule
            organization" evidence=IGI] [GO:0071472 "cellular response to salt
            stress" evidence=IGI] [GO:0000271 "polysaccharide biosynthetic
            process" evidence=RCA] [GO:0009825 "multidimensional cell growth"
            evidence=RCA] [GO:0009932 "cell tip growth" evidence=RCA]
            [GO:0010817 "regulation of hormone levels" evidence=RCA]
            [GO:0043481 "anthocyanin accumulation in tissues in response to UV
            light" evidence=RCA] [GO:0048767 "root hair elongation"
            evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009826 EMBL:AC006836
            GO:GO:0071472 GO:GO:0043622 GO:GO:0005876 GO:GO:0009524
            GO:GO:0010005 GO:GO:0009574 UniGene:At.24723 UniGene:At.48415
            EMBL:AY464947 EMBL:Z96936 EMBL:AF412118 EMBL:AY045933 EMBL:AY113867
            EMBL:AY084847 IPI:IPI00534252 PIR:B84451 RefSeq:NP_001154491.1
            RefSeq:NP_178464.1 IntAct:Q9SJW3 STRING:Q9SJW3 PRIDE:Q9SJW3
            EnsemblPlants:AT2G03680.1 EnsemblPlants:AT2G03680.2 GeneID:814896
            KEGG:ath:AT2G03680 TAIR:At2g03680 eggNOG:NOG298980
            InParanoid:Q9SJW3 OMA:NYARAEG PhylomeDB:Q9SJW3
            ProtClustDB:CLSN2683846 Genevestigator:Q9SJW3 GO:GO:0051211
            Uniprot:Q9SJW3
        Length = 119

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 41/79 (51%), Positives = 49/79 (62%)

Query:    28 PAPQTVSLPPYGIDTTTE--KPQD--NQAPN--KPNVSNNYHRAQGQNTGNFITDRPSTK 81
             PAP   ++    + T T   +P +   Q P   K  V NNY RA+GQNTGNF+TDRPSTK
Sbjct:    42 PAPPVTAVTATALTTATTSVEPAELNKQIPAGIKTPV-NNYARAEGQNTGNFLTDRPSTK 100

Query:    82 VKSVPGGDSSLGYLF-GDK 99
             V + PGG SSL YLF G K
Sbjct:   101 VHAAPGGGSSLDYLFTGGK 119


>TAIR|locus:2180902 [details] [associations]
            symbol:SP1L4 "AT5G15600" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002688 GO:GO:0005874
            EMBL:AL391143 EMBL:BT004163 EMBL:BT005051 EMBL:AY087175
            IPI:IPI00540974 PIR:T51538 RefSeq:NP_197064.1 UniGene:At.31778
            IntAct:Q9LF22 PRIDE:Q9LF22 EnsemblPlants:AT5G15600.1 GeneID:831412
            KEGG:ath:AT5G15600 TAIR:At5g15600 eggNOG:NOG315668
            InParanoid:Q9LF22 OMA:CGNFLTE PhylomeDB:Q9LF22
            ProtClustDB:CLSN2916864 Genevestigator:Q9LF22 Uniprot:Q9LF22
        Length = 127

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 34/59 (57%), Positives = 43/59 (72%)

Query:    42 TTT---EKPQDNQAPNKPNVSNNYHRAQGQNTGNFITDRPSTKVKSVPGGDSSLGYLFG 97
             TTT    K ++N A  + +  NNY+R+ GQN GNF+T+RPSTKV + PGG SSLGYLFG
Sbjct:    62 TTTGDKNKTEENSAGVRGS-PNNYYRSDGQNCGNFLTERPSTKVHAAPGGGSSLGYLFG 119


>TAIR|locus:2076537 [details] [associations]
            symbol:SP1L3 "AT3G02180" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC009755
            EMBL:AC011664 GO:GO:0005874 HOGENOM:HOG000240966 EMBL:AY045878
            EMBL:AY117217 EMBL:AY086253 IPI:IPI00519563 RefSeq:NP_566166.1
            RefSeq:NP_974209.1 UniGene:At.19767 STRING:Q9S7P8 PRIDE:Q9S7P8
            EnsemblPlants:AT3G02180.1 EnsemblPlants:AT3G02180.2 GeneID:821277
            KEGG:ath:AT3G02180 TAIR:At3g02180 InParanoid:Q9S7P8 OMA:AGIQSSK
            PhylomeDB:Q9S7P8 ProtClustDB:CLSN2687478 Genevestigator:Q9S7P8
            Uniprot:Q9S7P8
        Length = 122

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 34/60 (56%), Positives = 40/60 (66%)

Query:    40 IDTTTEKPQDNQAPNKP--NVSNNYHRAQGQNTGNFITDRPSTKVKSVPGGDSSLGYLFG 97
             I TTT    DN+  +       NNY R++GQN GNF+TDRPSTKV + PGG SSL YLFG
Sbjct:    53 ITTTTTTVTDNKKTSAGVRGSPNNYFRSEGQNCGNFLTDRPSTKVHAAPGGGSSLDYLFG 112


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.305   0.128   0.376    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       99        80   0.00091  102 3  11 23  0.42    30
                                                     29  0.41    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  443 (47 KB)
  Total size of DFA:  88 KB (2068 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.76u 0.11s 14.87t   Elapsed:  00:00:01
  Total cpu time:  14.76u 0.11s 14.87t   Elapsed:  00:00:01
  Start:  Fri May 10 20:06:44 2013   End:  Fri May 10 20:06:45 2013

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