BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034284
MTQKGNLFKGQQKKKTVPPNRHGKIIQARKGKRYVKPSKITKDMDVDRELTKFINHCNEV
KAATLANKEGGQLSIVKPPAESSATAGNKKDSQPETAEA

High Scoring Gene Products

Symbol, full name Information P value
AT3G52040 protein from Arabidopsis thaliana 1.2e-28
zgc:136864 gene_product from Danio rerio 0.00072

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034284
        (99 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2083755 - symbol:AT3G52040 "AT3G52040" species...   319  1.2e-28   1
POMBASE|SPCC24B10.18 - symbol:SPCC24B10.18 "human Leydig ...    96  5.0e-05   1
ZFIN|ZDB-GENE-060331-129 - symbol:zgc:136864 "zgc:136864"...    85  0.00072   1


>TAIR|locus:2083755 [details] [associations]
            symbol:AT3G52040 "AT3G52040" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AL049711 UniGene:At.3207
            EMBL:AY088868 EMBL:BT024542 EMBL:BT025024 IPI:IPI00521770
            PIR:T49083 RefSeq:NP_190772.1 STRING:Q9SV00 PRIDE:Q9SV00
            EnsemblPlants:AT3G52040.1 GeneID:824367 KEGG:ath:AT3G52040
            TAIR:At3g52040 eggNOG:NOG268423 HOGENOM:HOG000237756
            InParanoid:Q9SV00 OMA:FINQCNE PhylomeDB:Q9SV00
            ProtClustDB:CLSN2684743 Genevestigator:Q9SV00 Uniprot:Q9SV00
        Length = 90

 Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 63/89 (70%), Positives = 70/89 (78%)

Query:     1 MTQKGNLFKGQQKKKTVPPNRHGKIIQARKGKRYVKPSKITKDMDVDRELTKFINHCNEV 60
             MTQK N FKGQQK+KT+ PNRHGK IQ RKGKR VKP+K+TK+MD DRELTKFINHCNEV
Sbjct:     1 MTQKSNQFKGQQKRKTIAPNRHGKSIQTRKGKRNVKPTKMTKEMDTDRELTKFINHCNEV 60

Query:    61 KAATLANKEGGQLSIVKPPAESSATAGNK 89
             KA   A KEGGQL+I+K  AES      K
Sbjct:    61 KATNAACKEGGQLNIIK--AESQPEPSKK 87


>POMBASE|SPCC24B10.18 [details] [associations]
            symbol:SPCC24B10.18 "human Leydig cell tumor 10 kDa
            protein homolog" species:4896 "Schizosaccharomyces pombe"
            [GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0008150
            "biological_process" evidence=ND] PomBase:SPCC24B10.18
            GO:GO:0005730 EMBL:CU329672 InterPro:IPR019034 Pfam:PF09495
            PIR:T50425 RefSeq:NP_588021.1 EnsemblFungi:SPCC24B10.18.1
            GeneID:2539098 KEGG:spo:SPCC24B10.18 eggNOG:NOG271860
            OrthoDB:EOG4QJVZK NextBio:20800270 Uniprot:Q9P7I8
        Length = 93

 Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
 Identities = 25/79 (31%), Positives = 43/79 (54%)

Query:    12 QKKKTVPPNRHGKIIQ----ARKGKRYVKPSKIT--KDMDVDRELTKFINHCNEVKAATL 65
             +KKK    N+ G++ +     +KG RY  P +    KD  ++  +TK +N  NE   A +
Sbjct:     7 KKKKNSSANKGGRVTKHSKNPKKGARYCAPRRAAAIKDHTINANITKTLNVRNEKLIAGI 66

Query:    66 ANKEGGQLSIVKPPAESSA 84
             A+++ G+L+I K   E+ A
Sbjct:    67 ASQQVGKLTITKALGEAGA 85


>ZFIN|ZDB-GENE-060331-129 [details] [associations]
            symbol:zgc:136864 "zgc:136864" species:7955 "Danio
            rerio" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0003674 "molecular_function"
            evidence=ND] ZFIN:ZDB-GENE-060331-129 eggNOG:NOG43748
            GeneTree:ENSGT00390000011740 HOGENOM:HOG000059528
            HOVERGEN:HBG006239 OMA:FQARKPG OrthoDB:EOG412M76 InterPro:IPR019034
            Pfam:PF09495 EMBL:BC114294 IPI:IPI00502061 RefSeq:NP_001035133.1
            UniGene:Dr.79332 Ensembl:ENSDART00000083572 GeneID:677749
            KEGG:dre:677749 InParanoid:Q24JV4 NextBio:20902359 Bgee:Q24JV4
            Uniprot:Q24JV4
        Length = 98

 Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
 Identities = 29/86 (33%), Positives = 45/86 (52%)

Query:     5 GNLFKGQQKKKTVPPNRHGKIIQARKGKRYVKPSKITKDMDVDRELTKFINHCNEVKAAT 64
             G   K Q K K +   + G+II  +K +  V+  K+ K ++V   +   I H    KA+T
Sbjct:    14 GGAKKHQNKPKGL--KKGGRIIAPKKAQ-VVQQQKLKKGLEV--AIRNKIEHEVTQKAST 68

Query:    65 LANKEGGQLSIVKPPAESSATAGNKK 90
               +K+   LS++K PA+ S TAG  K
Sbjct:    69 SLHKK---LSVLKTPAQKSGTAGAPK 91


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.307   0.125   0.343    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       99        99   0.00091  102 3  11 23  0.49    30
                                                     29  0.46    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  476 (51 KB)
  Total size of DFA:  93 KB (2069 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.39u 0.11s 12.50t   Elapsed:  00:00:00
  Total cpu time:  12.39u 0.11s 12.50t   Elapsed:  00:00:00
  Start:  Fri May 10 20:08:18 2013   End:  Fri May 10 20:08:18 2013

Back to top