BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034289
MVGIFSRFSVGRAGHRRTQSAIDEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAVEFK
PVEHPIEPLDNDLPIQCPLPEPSILNVSLKNLVCSFEIL

High Scoring Gene Products

Symbol, full name Information P value
AT1G31940 protein from Arabidopsis thaliana 1.4e-23
AT2G35585 protein from Arabidopsis thaliana 2.7e-20
AT2G01913 protein from Arabidopsis thaliana 6.3e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034289
        (99 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2034441 - symbol:AT1G31940 species:3702 "Arabi...   271  1.4e-23   1
TAIR|locus:505006293 - symbol:AT2G35585 "AT2G35585" speci...   240  2.7e-20   1
TAIR|locus:1009023183 - symbol:AT2G01913 "AT2G01913" spec...    95  6.3e-05   1


>TAIR|locus:2034441 [details] [associations]
            symbol:AT1G31940 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0005886 "plasma membrane"
            evidence=IDA] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
            HOGENOM:HOG000239386 ProtClustDB:CLSN2688173 EMBL:AY069896
            EMBL:AY094031 EMBL:AY086420 IPI:IPI00542355 RefSeq:NP_564386.1
            UniGene:At.28437 EnsemblPlants:AT1G31940.1 GeneID:840084
            KEGG:ath:AT1G31940 TAIR:At1g31940 eggNOG:NOG307290
            InParanoid:Q8VYV3 OMA:RIWKERV PhylomeDB:Q8VYV3
            Genevestigator:Q8VYV3 Uniprot:Q8VYV3
        Length = 158

 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 54/86 (62%), Positives = 58/86 (67%)

Query:     1 MVGIFSRFSVGRAGHRRTQSAIDEREVLPPNPXXXXXXXXXXXXXXXXXXXXXXXXXEFK 60
             MVGIFSRFSVGR+ HRRTQSAID++EVL PN                          EFK
Sbjct:     1 MVGIFSRFSVGRSTHRRTQSAIDDKEVLAPN----SDVIAATTTTATTATHGIEVATEFK 56

Query:    61 PVEHPIEPLDNDLPIQCPLPEPSILN 86
             PVEHP+EPLDNDLPIQCPLPEPSILN
Sbjct:    57 PVEHPVEPLDNDLPIQCPLPEPSILN 82


>TAIR|locus:505006293 [details] [associations]
            symbol:AT2G35585 "AT2G35585" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC005314
            EMBL:AY088349 EMBL:BT024824 IPI:IPI00520981 RefSeq:NP_565808.1
            UniGene:At.37650 EnsemblPlants:AT2G35585.1 GeneID:818124
            KEGG:ath:AT2G35585 TAIR:At2g35585 eggNOG:NOG301730
            HOGENOM:HOG000239386 InParanoid:Q8S8M7 OMA:NLLEECK PhylomeDB:Q8S8M7
            ProtClustDB:CLSN2688173 ArrayExpress:Q8S8M7 Genevestigator:Q8S8M7
            Uniprot:Q8S8M7
        Length = 156

 Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
 Identities = 51/86 (59%), Positives = 53/86 (61%)

Query:     1 MVGIFSRFSVGRAGHRRTQSAIDEREVLPPNPXXXXXXXXXXXXXXXXXXXXXXXXXEFK 60
             MVGIFSRFSV R  HRRTQSAID REVL P                           EFK
Sbjct:     1 MVGIFSRFSVVRGSHRRTQSAIDGREVLSPR-----SDLAPATNTTTTETHGIEVATEFK 55

Query:    61 PVEHPIEPLDNDLPIQCPLPEPSILN 86
             PV+HP+EPLDND PIQCPLPEPSILN
Sbjct:    56 PVDHPMEPLDNDQPIQCPLPEPSILN 81


>TAIR|locus:1009023183 [details] [associations]
            symbol:AT2G01913 "AT2G01913" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:DQ487505
            EMBL:BT030659 IPI:IPI00656586 RefSeq:NP_001030946.1
            UniGene:At.63224 EnsemblPlants:AT2G01913.1 GeneID:3768477
            KEGG:ath:AT2G01913 TAIR:At2g01913 OMA:MMEYDEE PhylomeDB:Q1G3S9
            Genevestigator:Q2V4B3 Uniprot:Q1G3S9
        Length = 138

 Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
 Identities = 17/28 (60%), Positives = 21/28 (75%)

Query:    58 EFKPVEHPIEPLDNDLPIQCPLPEPSIL 85
             EF PVEHPIEP + D P++CP+P  S L
Sbjct:    30 EFCPVEHPIEPEEEDRPVKCPVPISSSL 57


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.141   0.431    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       99        74   0.00091  102 3  11 22  0.38    29
                                                     29  0.46    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  475 (51 KB)
  Total size of DFA:  89 KB (2067 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.58u 0.33s 7.91t   Elapsed:  00:00:00
  Total cpu time:  7.58u 0.33s 7.91t   Elapsed:  00:00:00
  Start:  Fri May 10 20:13:35 2013   End:  Fri May 10 20:13:35 2013

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