BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034289
(99 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224139046|ref|XP_002326754.1| predicted protein [Populus trichocarpa]
gi|222834076|gb|EEE72553.1| predicted protein [Populus trichocarpa]
Length = 152
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/86 (79%), Positives = 70/86 (81%), Gaps = 5/86 (5%)
Query: 1 MVGIFSRFSVGRAGHRRTQSAIDEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAVEFK 60
MVGIFSRFSVGR GHRRTQSA+DEREVLPPN VTGA AA HGI+ AVEFK
Sbjct: 1 MVGIFSRFSVGRGGHRRTQSALDEREVLPPNADVTGA-----AAVVAAAPHGIEVAVEFK 55
Query: 61 PVEHPIEPLDNDLPIQCPLPEPSILN 86
PVEHPIEPLDND PIQCPLPEPSILN
Sbjct: 56 PVEHPIEPLDNDQPIQCPLPEPSILN 81
>gi|449456751|ref|XP_004146112.1| PREDICTED: uncharacterized protein LOC101208810 isoform 1
[Cucumis sativus]
gi|449509510|ref|XP_004163609.1| PREDICTED: uncharacterized LOC101208810 isoform 1 [Cucumis
sativus]
Length = 138
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/86 (74%), Positives = 69/86 (80%), Gaps = 5/86 (5%)
Query: 1 MVGIFSRFSVGRAGHRRTQSAIDEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAVEFK 60
MVGIFSRFS R GHRR QSA+D RE LPPNP TG +AT+A A+ HGI+ AVEFK
Sbjct: 1 MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGV---SATSATAS--HGIEVAVEFK 55
Query: 61 PVEHPIEPLDNDLPIQCPLPEPSILN 86
PVEHPIEPLDND PIQCPLPEPSILN
Sbjct: 56 PVEHPIEPLDNDQPIQCPLPEPSILN 81
>gi|147843797|emb|CAN79460.1| hypothetical protein VITISV_022546 [Vitis vinifera]
Length = 154
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/86 (75%), Positives = 68/86 (79%), Gaps = 1/86 (1%)
Query: 1 MVGIFSRFSVGRAGHRRTQSAIDEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAVEFK 60
MVGIFSRFSV RA HRRTQSA+DEREVLP N VTGA AAA HGI+ AVEFK
Sbjct: 1 MVGIFSRFSVSRAAHRRTQSALDEREVLPSNSEVTGAA-NAVAVAAAVAPHGIEVAVEFK 59
Query: 61 PVEHPIEPLDNDLPIQCPLPEPSILN 86
PVEHP EPLDND P+QCPLPEPSILN
Sbjct: 60 PVEHPTEPLDNDRPVQCPLPEPSILN 85
>gi|359807636|ref|NP_001241166.1| uncharacterized protein LOC100791210 [Glycine max]
gi|255638588|gb|ACU19601.1| unknown [Glycine max]
gi|255638658|gb|ACU19634.1| unknown [Glycine max]
Length = 151
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/86 (75%), Positives = 70/86 (81%), Gaps = 4/86 (4%)
Query: 1 MVGIFSRFSVGRAGHRRTQSAIDEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAVEFK 60
MVGIFSRFSVGR HRRTQSA+DEREV+PPNP A +AA A +HGI+ AVEFK
Sbjct: 1 MVGIFSRFSVGRNVHRRTQSALDEREVMPPNPEAVAA----VASAATATSHGIEVAVEFK 56
Query: 61 PVEHPIEPLDNDLPIQCPLPEPSILN 86
PVEHPIEPLDND PIQCPLPEPSILN
Sbjct: 57 PVEHPIEPLDNDRPIQCPLPEPSILN 82
>gi|255555925|ref|XP_002518998.1| conserved hypothetical protein [Ricinus communis]
gi|223541985|gb|EEF43531.1| conserved hypothetical protein [Ricinus communis]
Length = 115
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 74/99 (74%), Gaps = 6/99 (6%)
Query: 1 MVGIFSRFSVGRAGHRRTQSAIDEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAVEFK 60
MVGIFSRFSVGRAGHRR+QSA+DEREVLPPN V A T AA HGI AVEFK
Sbjct: 1 MVGIFSRFSVGRAGHRRSQSALDEREVLPPNEDVA-----RAATVTAAAPHGIGVAVEFK 55
Query: 61 PVEHPIEPLDNDLPIQCPLPEPSILNVSLKNLVCSFEIL 99
PVEHPIEPLD+D PIQCPLPEPSILN L + C IL
Sbjct: 56 PVEHPIEPLDSDQPIQCPLPEPSILN-WLTGIKCPLSIL 93
>gi|225427063|ref|XP_002274901.1| PREDICTED: uncharacterized protein LOC100257507 [Vitis vinifera]
gi|297742009|emb|CBI33796.3| unnamed protein product [Vitis vinifera]
Length = 154
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/86 (74%), Positives = 68/86 (79%), Gaps = 1/86 (1%)
Query: 1 MVGIFSRFSVGRAGHRRTQSAIDEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAVEFK 60
MVGIFSRFSV RA HRRTQSA+DERE+LP N VTGA AAA HGI+ AVEFK
Sbjct: 1 MVGIFSRFSVSRAAHRRTQSALDERELLPSNSEVTGAA-NAVAVAAAVAPHGIEVAVEFK 59
Query: 61 PVEHPIEPLDNDLPIQCPLPEPSILN 86
PVEHP EPLDND P+QCPLPEPSILN
Sbjct: 60 PVEHPTEPLDNDRPVQCPLPEPSILN 85
>gi|18398194|ref|NP_564386.1| uncharacterized protein [Arabidopsis thaliana]
gi|17978974|gb|AAL47448.1| At1g31940/F5M6.6 [Arabidopsis thaliana]
gi|20334862|gb|AAM16187.1| At1g31940/F5M6.6 [Arabidopsis thaliana]
gi|21554317|gb|AAM63422.1| unknown [Arabidopsis thaliana]
gi|332193299|gb|AEE31420.1| uncharacterized protein [Arabidopsis thaliana]
Length = 158
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/86 (72%), Positives = 67/86 (77%), Gaps = 4/86 (4%)
Query: 1 MVGIFSRFSVGRAGHRRTQSAIDEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAVEFK 60
MVGIFSRFSVGR+ HRRTQSAID++EVL PN V TT A HGI+ A EFK
Sbjct: 1 MVGIFSRFSVGRSTHRRTQSAIDDKEVLAPNSDVIA----ATTTTATTATHGIEVATEFK 56
Query: 61 PVEHPIEPLDNDLPIQCPLPEPSILN 86
PVEHP+EPLDNDLPIQCPLPEPSILN
Sbjct: 57 PVEHPVEPLDNDLPIQCPLPEPSILN 82
>gi|297851628|ref|XP_002893695.1| hypothetical protein ARALYDRAFT_473384 [Arabidopsis lyrata subsp.
lyrata]
gi|297339537|gb|EFH69954.1| hypothetical protein ARALYDRAFT_473384 [Arabidopsis lyrata subsp.
lyrata]
Length = 158
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/86 (70%), Positives = 66/86 (76%), Gaps = 4/86 (4%)
Query: 1 MVGIFSRFSVGRAGHRRTQSAIDEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAVEFK 60
MVGIFSRFSVGR+ HRRTQSAID++EVL PN V TT A HGI+ A EFK
Sbjct: 1 MVGIFSRFSVGRSSHRRTQSAIDDKEVLAPN----SDVAAATTTTATTATHGIEVATEFK 56
Query: 61 PVEHPIEPLDNDLPIQCPLPEPSILN 86
PVEHP+EPLDN LPIQCPLPEPSILN
Sbjct: 57 PVEHPVEPLDNHLPIQCPLPEPSILN 82
>gi|297823351|ref|XP_002879558.1| hypothetical protein ARALYDRAFT_902663 [Arabidopsis lyrata subsp.
lyrata]
gi|297325397|gb|EFH55817.1| hypothetical protein ARALYDRAFT_902663 [Arabidopsis lyrata subsp.
lyrata]
Length = 155
Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/86 (70%), Positives = 65/86 (75%), Gaps = 5/86 (5%)
Query: 1 MVGIFSRFSVGRAGHRRTQSAIDEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAVEFK 60
MVGIFSRFSV R GHRRTQSAID REVL P + P TT AA HGI+ A EFK
Sbjct: 1 MVGIFSRFSVVRGGHRRTQSAIDGREVLSPR---SDLAPSANTTTAAT--HGIEVATEFK 55
Query: 61 PVEHPIEPLDNDLPIQCPLPEPSILN 86
PV+HP+EPLDND PIQCPLPEPSILN
Sbjct: 56 PVDHPMEPLDNDQPIQCPLPEPSILN 81
>gi|356531471|ref|XP_003534301.1| PREDICTED: uncharacterized protein LOC100804987 [Glycine max]
Length = 151
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/86 (73%), Positives = 68/86 (79%), Gaps = 4/86 (4%)
Query: 1 MVGIFSRFSVGRAGHRRTQSAIDEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAVEFK 60
MVGIFSRFS+GR HRRTQSA+DEREV PPN A +AA A +HGI+ AVEFK
Sbjct: 1 MVGIFSRFSIGRNVHRRTQSALDEREVRPPNSEAAAA----VASAATATSHGIEVAVEFK 56
Query: 61 PVEHPIEPLDNDLPIQCPLPEPSILN 86
PVEHPIEPLDND PIQCPLPEPSILN
Sbjct: 57 PVEHPIEPLDNDRPIQCPLPEPSILN 82
>gi|357484825|ref|XP_003612700.1| hypothetical protein MTR_5g027940 [Medicago truncatula]
gi|355514035|gb|AES95658.1| hypothetical protein MTR_5g027940 [Medicago truncatula]
gi|388502786|gb|AFK39459.1| unknown [Medicago truncatula]
Length = 149
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/86 (68%), Positives = 67/86 (77%), Gaps = 3/86 (3%)
Query: 1 MVGIFSRFSVGRAGHRRTQSAIDEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAVEFK 60
MVG+FSRFSVG+ HRRTQSA+DEREV P N + A +A A +HGI+ AVEFK
Sbjct: 1 MVGLFSRFSVGKNIHRRTQSALDEREVTPAN---SEVAAAVAASATTATSHGIEVAVEFK 57
Query: 61 PVEHPIEPLDNDLPIQCPLPEPSILN 86
PVEHP+EPLDND PIQCPLPEPSILN
Sbjct: 58 PVEHPVEPLDNDRPIQCPLPEPSILN 83
>gi|18403887|ref|NP_565808.1| uncharacterized protein [Arabidopsis thaliana]
gi|20197354|gb|AAM15039.1| Expressed protein [Arabidopsis thaliana]
gi|21593923|gb|AAM65888.1| unknown [Arabidopsis thaliana]
gi|89111870|gb|ABD60707.1| At2g35585 [Arabidopsis thaliana]
gi|330254031|gb|AEC09125.1| uncharacterized protein [Arabidopsis thaliana]
Length = 156
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 61/86 (70%), Gaps = 5/86 (5%)
Query: 1 MVGIFSRFSVGRAGHRRTQSAIDEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAVEFK 60
MVGIFSRFSV R HRRTQSAID REVL P + AT HGI+ A EFK
Sbjct: 1 MVGIFSRFSVVRGSHRRTQSAIDGREVLSPRSDL-----APATNTTTTETHGIEVATEFK 55
Query: 61 PVEHPIEPLDNDLPIQCPLPEPSILN 86
PV+HP+EPLDND PIQCPLPEPSILN
Sbjct: 56 PVDHPMEPLDNDQPIQCPLPEPSILN 81
>gi|146454668|gb|ABQ42000.1| hypothetical protein [Sonneratia apetala]
Length = 114
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/64 (73%), Positives = 50/64 (78%), Gaps = 5/64 (7%)
Query: 23 DEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAVEFKPVEHPIEPLDNDLPIQCPLPEP 82
D REVLP NP + G TATTA + HGI+ AVEFKPVEHPIEPLDND PIQCPLPEP
Sbjct: 1 DGREVLPSNPVIAGG--ATATTAVS---HGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEP 55
Query: 83 SILN 86
SILN
Sbjct: 56 SILN 59
>gi|146454666|gb|ABQ41999.1| hypothetical protein [Sonneratia ovata]
Length = 114
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/64 (73%), Positives = 50/64 (78%), Gaps = 5/64 (7%)
Query: 23 DEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAVEFKPVEHPIEPLDNDLPIQCPLPEP 82
D REVLP NP + G TATTA + HGI+ AVEFKPVEHPIEPLDND PIQCPLPEP
Sbjct: 1 DGREVLPSNPVIAGG--ATATTAVS---HGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEP 55
Query: 83 SILN 86
SILN
Sbjct: 56 SILN 59
>gi|357137134|ref|XP_003570156.1| PREDICTED: uncharacterized protein LOC100837385 [Brachypodium
distachyon]
Length = 192
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 61/88 (69%), Gaps = 8/88 (9%)
Query: 1 MVGIFSRFSVGRAGHRRTQSAIDEREVLPPNPAVTGAVPGTATTAAAAGA--HGIQAAVE 58
MVGIFSRFS G A HRR +SA++ E L PN G + AA AG HGI+ +E
Sbjct: 36 MVGIFSRFSAGGA-HRRAKSAVEVVETLAPNMET-----GESDPAAVAGDSPHGIEVGIE 89
Query: 59 FKPVEHPIEPLDNDLPIQCPLPEPSILN 86
FKPVEHP+EP++ D P++CPLPEPSIL+
Sbjct: 90 FKPVEHPVEPVNLDQPVKCPLPEPSILH 117
>gi|449456753|ref|XP_004146113.1| PREDICTED: uncharacterized protein LOC101208810 isoform 2
[Cucumis sativus]
gi|449509513|ref|XP_004163610.1| PREDICTED: uncharacterized LOC101208810 isoform 2 [Cucumis
sativus]
Length = 118
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/64 (73%), Positives = 51/64 (79%), Gaps = 5/64 (7%)
Query: 23 DEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAVEFKPVEHPIEPLDNDLPIQCPLPEP 82
D RE LPPNP TG +AT+A A+ HGI+ AVEFKPVEHPIEPLDND PIQCPLPEP
Sbjct: 3 DGREGLPPNPESTGV---SATSATAS--HGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEP 57
Query: 83 SILN 86
SILN
Sbjct: 58 SILN 61
>gi|326488235|dbj|BAJ93786.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 157
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 61/88 (69%), Gaps = 8/88 (9%)
Query: 1 MVGIFSRFSVGRAGHRRTQSAIDEREVLPPNPAVTGAVPGTATTAAAAGA--HGIQAAVE 58
MVGIFSRFS G AGHRR +SA++ E L PN G + AA G HGI+ +E
Sbjct: 1 MVGIFSRFSSG-AGHRRAKSAVEVVETLAPNMET-----GESDPAADPGDSPHGIEVGME 54
Query: 59 FKPVEHPIEPLDNDLPIQCPLPEPSILN 86
FKPVEHP+EP++ D P++CPLPEPSIL+
Sbjct: 55 FKPVEHPVEPVNLDQPVKCPLPEPSILH 82
>gi|413938371|gb|AFW72922.1| hypothetical protein ZEAMMB73_596440 [Zea mays]
Length = 92
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 60/88 (68%), Gaps = 4/88 (4%)
Query: 1 MVGIFSRFSVGRAGHRRTQSAIDEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAVEFK 60
MVGIFSRFS G HRR++S + E L PN + + P A A + HGI+ VEFK
Sbjct: 1 MVGIFSRFSAG--AHRRSKSVAEAVETLAPNISTGESDPAAAVPAESP--HGIEVGVEFK 56
Query: 61 PVEHPIEPLDNDLPIQCPLPEPSILNVS 88
PVE P+EP++ D P++CPLPEPSIL+VS
Sbjct: 57 PVERPVEPINLDEPVKCPLPEPSILHVS 84
>gi|115448085|ref|NP_001047822.1| Os02g0697700 [Oryza sativa Japonica Group]
gi|41052953|dbj|BAD07863.1| unknown protein [Oryza sativa Japonica Group]
gi|113537353|dbj|BAF09736.1| Os02g0697700 [Oryza sativa Japonica Group]
gi|125540776|gb|EAY87171.1| hypothetical protein OsI_08572 [Oryza sativa Indica Group]
gi|125583348|gb|EAZ24279.1| hypothetical protein OsJ_08030 [Oryza sativa Japonica Group]
gi|215767691|dbj|BAG99919.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 156
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 59/86 (68%), Gaps = 5/86 (5%)
Query: 1 MVGIFSRFSVGRAGHRRTQSAIDEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAVEFK 60
MVGIFSRFS G HRR +SA++ E L PN + P + A + HGI+ VEFK
Sbjct: 1 MVGIFSRFSAG--AHRRAKSAVEVVETLAPN--MNSGEPDSQAVPADS-PHGIEVGVEFK 55
Query: 61 PVEHPIEPLDNDLPIQCPLPEPSILN 86
PVEHP+EP++ D P++CPLPEPSIL+
Sbjct: 56 PVEHPVEPVNLDQPVKCPLPEPSILH 81
>gi|242062824|ref|XP_002452701.1| hypothetical protein SORBIDRAFT_04g030970 [Sorghum bicolor]
gi|241932532|gb|EES05677.1| hypothetical protein SORBIDRAFT_04g030970 [Sorghum bicolor]
Length = 156
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 57/86 (66%), Gaps = 5/86 (5%)
Query: 1 MVGIFSRFSVGRAGHRRTQSAIDEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAVEFK 60
MVGIFSRFS G HRR++S + E L PN + + P A HGI+ VEFK
Sbjct: 1 MVGIFSRFSAG--AHRRSKSVAEVVETLAPNMSTGESDPAAV---PAESPHGIEVGVEFK 55
Query: 61 PVEHPIEPLDNDLPIQCPLPEPSILN 86
PVEHP+EPL+ D P++CPLPEPSIL+
Sbjct: 56 PVEHPVEPLNLDEPVKCPLPEPSILH 81
>gi|146454664|gb|ABQ41998.1| hypothetical protein [Sonneratia caseolaris]
Length = 114
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 48/64 (75%), Gaps = 5/64 (7%)
Query: 23 DEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAVEFKPVEHPIEPLDNDLPIQCPLPEP 82
D RE LP NP + G TATTA HGI+ AVEFKPVEHPIEPLDND PIQCPLPEP
Sbjct: 1 DGREGLPSNPVIAGGA--TATTAVC---HGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEP 55
Query: 83 SILN 86
SILN
Sbjct: 56 SILN 59
>gi|146454662|gb|ABQ41997.1| hypothetical protein [Sonneratia alba]
gi|241865182|gb|ACS68669.1| hypothetical protein [Sonneratia alba]
gi|241865414|gb|ACS68739.1| hypothetical protein [Sonneratia alba]
Length = 115
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 48/64 (75%), Gaps = 5/64 (7%)
Query: 23 DEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAVEFKPVEHPIEPLDNDLPIQCPLPEP 82
D RE LP NP + G TATTA HGI+ AVEFKPVEHPIEPLDND PIQCPLPEP
Sbjct: 1 DGREGLPSNPVIAGGA--TATTAVC---HGIEVAVEFKPVEHPIEPLDNDRPIQCPLPEP 55
Query: 83 SILN 86
SILN
Sbjct: 56 SILN 59
>gi|226509952|ref|NP_001145930.1| uncharacterized protein LOC100279453 [Zea mays]
gi|195635851|gb|ACG37394.1| hypothetical protein [Zea mays]
gi|219884991|gb|ACL52870.1| unknown [Zea mays]
gi|413938372|gb|AFW72923.1| hypothetical protein ZEAMMB73_596440 [Zea mays]
Length = 157
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 4/86 (4%)
Query: 1 MVGIFSRFSVGRAGHRRTQSAIDEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAVEFK 60
MVGIFSRFS G HRR++S + E L PN + + P A A + HGI+ VEFK
Sbjct: 1 MVGIFSRFSAG--AHRRSKSVAEAVETLAPNISTGESDPAAAVPAESP--HGIEVGVEFK 56
Query: 61 PVEHPIEPLDNDLPIQCPLPEPSILN 86
PVE P+EP++ D P++CPLPEPSIL+
Sbjct: 57 PVERPVEPINLDEPVKCPLPEPSILH 82
>gi|195656579|gb|ACG47757.1| hypothetical protein [Zea mays]
Length = 157
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 57/86 (66%), Gaps = 4/86 (4%)
Query: 1 MVGIFSRFSVGRAGHRRTQSAIDEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAVEFK 60
MVGIFSRFS G HRR++S + E L N + + P A A + HGI+ VEFK
Sbjct: 1 MVGIFSRFSAG--AHRRSKSVAEAVETLATNMSTGESDPAAAVPAESP--HGIEVGVEFK 56
Query: 61 PVEHPIEPLDNDLPIQCPLPEPSILN 86
PVE P+EP++ D P++CPLPEPSIL+
Sbjct: 57 PVERPVEPINLDEPVKCPLPEPSILH 82
>gi|116788839|gb|ABK25019.1| unknown [Picea sitchensis]
Length = 145
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 54/86 (62%), Gaps = 10/86 (11%)
Query: 1 MVGIFSRFSVGRAGHRRTQSAIDEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAVEFK 60
MVGIFSR + RAG R+Q++ DERE G G + A A HG++ EFK
Sbjct: 1 MVGIFSRLTSSRAG-LRSQASTDERE---------GTPSGKDSPATLADNHGVEPTDEFK 50
Query: 61 PVEHPIEPLDNDLPIQCPLPEPSILN 86
PVEHP+EP D D P++CP PEPSIL+
Sbjct: 51 PVEHPLEPPDKDQPVRCPPPEPSILH 76
>gi|12321287|gb|AAG50708.1|AC079041_1 unknown protein [Arabidopsis thaliana]
gi|12321465|gb|AAG50790.1|AC074309_7 unknown protein [Arabidopsis thaliana]
Length = 142
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 46/64 (71%), Gaps = 4/64 (6%)
Query: 23 DEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAVEFKPVEHPIEPLDNDLPIQCPLPEP 82
D++EVL PN V TT A HGI+ A EFKPVEHP+EPLDNDLPIQCPLPEP
Sbjct: 7 DDKEVLAPNSDVIA----ATTTTATTATHGIEVATEFKPVEHPVEPLDNDLPIQCPLPEP 62
Query: 83 SILN 86
SILN
Sbjct: 63 SILN 66
>gi|388497916|gb|AFK37024.1| unknown [Lotus japonicus]
Length = 101
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/31 (87%), Positives = 30/31 (96%)
Query: 1 MVGIFSRFSVGRAGHRRTQSAIDEREVLPPN 31
MVG+FSRFSVGR+ HRRTQSAIDEREV+PPN
Sbjct: 1 MVGLFSRFSVGRSTHRRTQSAIDEREVMPPN 31
>gi|147835703|emb|CAN68535.1| hypothetical protein VITISV_018797 [Vitis vinifera]
Length = 171
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 1 MVGIFSRFSVGRAGHRRTQSAID--EREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAVE 58
MVGIF+ + + H T +++D ER+ L + + +HG++ VE
Sbjct: 1 MVGIFTPLXLYKRSHSATSASLDKKERQFL----LIDETLDTPDRDGMDVRSHGVEGEVE 56
Query: 59 FKPVEHPIEPLDNDLPIQCPLPEPSILN 86
F P+EHP+EP D D P++CP+P+ S++N
Sbjct: 57 FWPIEHPMEPSDEDRPVKCPMPDSSVIN 84
>gi|326521940|dbj|BAK04098.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 140
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 37/49 (75%), Gaps = 2/49 (4%)
Query: 40 GTATTAAAAGA--HGIQAAVEFKPVEHPIEPLDNDLPIQCPLPEPSILN 86
G + AA G HGI+ +EFKPVEHP+EP++ D P++CPLPEPSIL+
Sbjct: 17 GESDPAADPGDSPHGIEVGMEFKPVEHPVEPVNLDQPVKCPLPEPSILH 65
>gi|297737575|emb|CBI26776.3| unnamed protein product [Vitis vinifera]
Length = 160
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 30/37 (81%)
Query: 50 AHGIQAAVEFKPVEHPIEPLDNDLPIQCPLPEPSILN 86
+HG++ VEF P+EHP+EP D D P++CP+P+ S++N
Sbjct: 37 SHGVEGEVEFWPIEHPMEPSDEDRPVKCPMPDSSVIN 73
>gi|225424478|ref|XP_002281684.1| PREDICTED: uncharacterized protein LOC100259457 [Vitis vinifera]
Length = 127
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 30/37 (81%)
Query: 50 AHGIQAAVEFKPVEHPIEPLDNDLPIQCPLPEPSILN 86
+HG++ VEF P+EHP+EP D D P++CP+P+ S++N
Sbjct: 5 SHGVEGEVEFWPIEHPMEPSDEDRPVKCPMPDSSVIN 41
>gi|302781949|ref|XP_002972748.1| hypothetical protein SELMODRAFT_228155 [Selaginella
moellendorffii]
gi|300159349|gb|EFJ25969.1| hypothetical protein SELMODRAFT_228155 [Selaginella
moellendorffii]
Length = 169
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 1 MVGIFSRFSVGRAGHRRTQSAIDEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAV--E 58
MVG+F+R + G +G D P T A GA + V E
Sbjct: 1 MVGVFTRIARGVSG--------DHHNHFPQGTETKTHTVLAVTLKDAIGAARLDLGVMEE 52
Query: 59 FKPVEHPIEPLDNDLPIQCPLPEPSILN 86
F PVEHP+EP DND P++CP PEP I++
Sbjct: 53 FAPVEHPLEPPDNDKPVRCPPPEPCIVH 80
>gi|302823419|ref|XP_002993362.1| hypothetical protein SELMODRAFT_272325 [Selaginella
moellendorffii]
gi|300138793|gb|EFJ05547.1| hypothetical protein SELMODRAFT_272325 [Selaginella
moellendorffii]
Length = 172
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 1 MVGIFSRFSVGRAGHRRTQSAIDEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAV--E 58
MVG+F+R + G +G D P T A GA + V E
Sbjct: 1 MVGVFTRIARGVSG--------DHHNHFPQGTETKAHTVLAVTLKDAIGAARLDLGVMEE 52
Query: 59 FKPVEHPIEPLDNDLPIQCPLPEPSILN 86
F PVEHP+EP D+D P++CP PEP I++
Sbjct: 53 FAPVEHPLEPPDHDKPVRCPPPEPCIVH 80
>gi|224101947|ref|XP_002312485.1| predicted protein [Populus trichocarpa]
gi|118482493|gb|ABK93169.1| unknown [Populus trichocarpa]
gi|222852305|gb|EEE89852.1| predicted protein [Populus trichocarpa]
Length = 130
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 51 HGIQAAVEFKPVEHPIEPLDNDLPIQCPLPEPSILN 86
H ++ VEF PVEHP+EP D D P++CP+P S++
Sbjct: 8 HAVEYEVEFWPVEHPMEPQDEDRPVKCPMPTSSVIK 43
>gi|388491352|gb|AFK33742.1| unknown [Lotus japonicus]
Length = 162
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 35 TGAVPGTATTAAAAGAH--GIQAAVEFKPVEHPIEPLDNDLPIQCPLPEPSILN 86
TGA + H G+ +F PVEHP+EP D D P++CP+PE S+++
Sbjct: 22 TGATEQNSIIMEVHHHHHQGVDKNTDFFPVEHPLEPPDEDRPVKCPMPESSVIS 75
>gi|356512269|ref|XP_003524843.1| PREDICTED: uncharacterized protein LOC100815951 [Glycine max]
Length = 163
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 53 IQAAVEFKPVEHPIEPLDNDLPIQCPLPEPSILN 86
+ + +F PVEHP+EP D D P++CP+PE S++N
Sbjct: 44 VDKSTDFFPVEHPMEPPDEDRPVKCPMPESSVIN 77
>gi|224108199|ref|XP_002314756.1| predicted protein [Populus trichocarpa]
gi|222863796|gb|EEF00927.1| predicted protein [Populus trichocarpa]
Length = 163
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 51 HGIQAAVEFKPVEHPIEPLDNDLPIQCPLPEPSILN 86
H ++ VEF PVEHP+EP D D P++CP+P S++
Sbjct: 41 HPVEFDVEFWPVEHPMEPQDEDRPVKCPMPTSSVIK 76
>gi|255561801|ref|XP_002521910.1| conserved hypothetical protein [Ricinus communis]
gi|223538948|gb|EEF40546.1| conserved hypothetical protein [Ricinus communis]
Length = 168
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 52 GIQAAVEFKPVEHPIEPLDNDLPIQCPLPEPSILN 86
++ VEF PVEHP+EP D D P++CP+P S++N
Sbjct: 48 AVEFDVEFWPVEHPMEPQDEDRPVKCPIPTSSVIN 82
>gi|168043298|ref|XP_001774122.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674529|gb|EDQ61036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 287
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 12/89 (13%)
Query: 1 MVGIFSRFSVGRAGHRRTQSAIDEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAVEFK 60
MVG F++ S R +R P + G + + AA HG+ F+
Sbjct: 146 MVGAFTKLSCDRPSNR------------PKHHHFLDGRIGWSRISPAASLHGVPPLEIFE 193
Query: 61 PVEHPIEPLDNDLPIQCPLPEPSILNVSL 89
VEHP EP+D D P +CP PE SIL L
Sbjct: 194 AVEHPSEPVDVDQPARCPPPERSILRDGL 222
>gi|356525028|ref|XP_003531129.1| PREDICTED: uncharacterized protein LOC100785535 [Glycine max]
Length = 132
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 25/32 (78%)
Query: 55 AAVEFKPVEHPIEPLDNDLPIQCPLPEPSILN 86
+ +F PVEHP+EP D D P++CP+PE S++N
Sbjct: 13 KSTDFCPVEHPMEPPDEDRPVKCPMPESSVIN 44
>gi|168060694|ref|XP_001782329.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666188|gb|EDQ52849.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 548
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 40 GTATTAAAAGAHGIQAAVEFKPVEHPIEPLDNDLPIQCPLPEPSILNVSL 89
G + AA HG+ F+PVEHP EP + D P+QCP E SI+ L
Sbjct: 354 GGKRISPAAALHGVPPLEAFEPVEHPAEPKEIDKPVQCPPQENSIMQDGL 403
>gi|168009371|ref|XP_001757379.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691502|gb|EDQ77864.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 384
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 59 FKPVEHPIEPLDNDLPIQCPLPEPSILNVSLKNLVCSFEI 98
F+ VEHP EP+D+DL CP PE I+ SL CS+ +
Sbjct: 149 FEAVEHPSEPVDSDLAAPCPPPERCIMQDSLIWKKCSWAV 188
>gi|229914862|gb|ACQ90587.1| unknown [Eutrema halophilum]
Length = 143
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 54 QAAVEFKPVEHPIEPLDNDLPIQCPLP 80
Q VEF PVEHPIEP + D P++CP+P
Sbjct: 26 QFDVEFCPVEHPIEPEEEDRPVKCPVP 52
>gi|79316402|ref|NP_001030946.1| uncharacterized protein [Arabidopsis thaliana]
gi|98961757|gb|ABF59208.1| unknown protein [Arabidopsis thaliana]
gi|149944393|gb|ABR46239.1| At2g01913 [Arabidopsis thaliana]
gi|330250424|gb|AEC05518.1| uncharacterized protein [Arabidopsis thaliana]
Length = 138
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 54 QAAVEFKPVEHPIEPLDNDLPIQCPLP 80
Q VEF PVEHPIEP + D P++CP+P
Sbjct: 26 QFDVEFCPVEHPIEPEEEDRPVKCPVP 52
>gi|195587385|ref|XP_002083445.1| GD13735 [Drosophila simulans]
gi|194195454|gb|EDX09030.1| GD13735 [Drosophila simulans]
Length = 1381
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 6 SRFSVGRAGHRRTQSAIDEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAVEFKPVE-- 63
S ++G AG RRT IDE + LP G+ PG A + + G+ + AA P E
Sbjct: 1253 SSLTLGTAGSRRTVYLIDEHQKLP-----DGSTPGAAQSQSVGGSGSVSAATP-TPAEPQ 1306
Query: 64 HPIEPLDNDLPI 75
P + +N+ P+
Sbjct: 1307 TPQKSTENNAPV 1318
>gi|195337063|ref|XP_002035152.1| GM14542 [Drosophila sechellia]
gi|194128245|gb|EDW50288.1| GM14542 [Drosophila sechellia]
Length = 1381
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Query: 6 SRFSVGRAGHRRTQSAIDEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAA--VEFKPVE 63
S ++G AG RRT IDE + LP G+ PG A + + G+ + AA +P +
Sbjct: 1253 SSLTLGTAGSRRTVYLIDEHQKLP-----DGSTPGAAQSQSVGGSGSVSAATPTSAEP-Q 1306
Query: 64 HPIEPLDNDLPI 75
P + +N+ P+
Sbjct: 1307 TPQKSTENNAPV 1318
>gi|168039131|ref|XP_001772052.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676653|gb|EDQ63133.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 251
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 38 VPGTATTAAAAGAHGIQAAVEFKPVEHPIEPLDNDLPIQCPLPEPSILN 86
V G ++ + ++G EF V P+EP D D P++CP PEP I++
Sbjct: 139 VNGVNHISSFSSSNGADYPTEFTFVPRPMEPTDLDKPVRCPPPEPCIVH 187
>gi|449445308|ref|XP_004140415.1| PREDICTED: uncharacterized protein LOC101204044 [Cucumis sativus]
Length = 115
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 56 AVEFKPVEHPIEPLDNDLPIQCPLPEPSIL 85
+EF P++HP+EP D D P+ CP+P + L
Sbjct: 10 KMEFWPLQHPLEPDDEDHPVICPMPNSTSL 39
>gi|449527013|ref|XP_004170507.1| PREDICTED: uncharacterized protein LOC101226334 [Cucumis sativus]
Length = 115
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 56 AVEFKPVEHPIEPLDNDLPIQCPLPEPSIL 85
+EF P++HP+EP D D P+ CP+P + L
Sbjct: 10 KMEFWPLQHPLEPDDEDHPVICPMPNSTSL 39
>gi|168049120|ref|XP_001777012.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671577|gb|EDQ58126.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 331
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 14/98 (14%)
Query: 1 MVGIFSRFSVGRAGHRRTQSAIDEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAVEFK 60
MV F +F+ HR Q + + V G + AA HG+ F
Sbjct: 191 MVRSFRKFAFYSTSHRPKQHYV-----------LVDTVRGKRISPDAA-LHGVPPLKTFV 238
Query: 61 PVEHPIEPLDNDLPIQCPLPEPSILN--VSLKNLVCSF 96
+EH EP + D P+QCP E SI+ ++ + ++ SF
Sbjct: 239 QIEHVSEPKEIDKPVQCPPSENSIIQDGLTWREIIASF 276
>gi|116622915|ref|YP_825071.1| glutamate synthase (NADH) large subunit [Candidatus Solibacter
usitatus Ellin6076]
gi|116226077|gb|ABJ84786.1| glutamate synthase (NADH) large subunit [Candidatus Solibacter
usitatus Ellin6076]
Length = 1497
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 1 MVGIFSRFSVGRAGHRRTQSAIDEREVLPPNPAVTGAVPGTATTAAAAGAHGIQAAVEFK 60
MVG V A ID +L NP + G + A A HG+ A+++K
Sbjct: 1177 MVGRVDMLDVRHANDHWKAKGIDLSTILY-NPQMPGRI---ARRCVQAQDHGLSEALDYK 1232
Query: 61 PVEHPIEPLDNDLPIQCPLP 80
++H + ++N PI+ LP
Sbjct: 1233 LIDHARDSIENGTPIEIKLP 1252
>gi|167999137|ref|XP_001752274.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696669|gb|EDQ83007.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 370
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 44 TAAAAGAHGIQAAVEFKPVEHPIEPLDNDLPIQCPLPEPSI 84
T +AA HG+ F+ VEHP E ++ D P CP PE I
Sbjct: 201 TISAAAVHGVPPLETFEAVEHPSELVNVDQPASCPPPERCI 241
>gi|444510192|gb|ELV09527.1| Cathepsin F [Tupaia chinensis]
Length = 597
Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 32/67 (47%), Gaps = 15/67 (22%)
Query: 33 AVTGAVPGTATTAAAAGAHGIQAAVEFKPVEHPIEPLDNDLPIQCPLPEPSILNVSLKNL 92
AV GAV G A + ++A +E EP ND P C LP VS K L
Sbjct: 197 AVLGAVRGRVRRAGHGSLYSLEATLE--------EPPCND-PTVCQLP------VSRKTL 241
Query: 93 VCSFEIL 99
+CSFE+L
Sbjct: 242 LCSFEVL 248
>gi|395851695|ref|XP_003798388.1| PREDICTED: LOW QUALITY PROTEIN: cathepsin F [Otolemur garnettii]
Length = 491
Score = 34.3 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 35/75 (46%), Gaps = 15/75 (20%)
Query: 25 REVLPPNPAVTGAVPGTATTAAAAGAHGIQAAVEFKPVEHPIEPLDNDLPIQCPLPEPSI 84
R+ P AV AV G A + ++A++E EP ND P C LP
Sbjct: 52 RDRAPGTQAVLRAVRGRVRQADQGSLYSLEASLE--------EPPCND-PTVCQLP---- 98
Query: 85 LNVSLKNLVCSFEIL 99
VS K L+CSFEIL
Sbjct: 99 --VSKKTLLCSFEIL 111
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,613,898,331
Number of Sequences: 23463169
Number of extensions: 60262230
Number of successful extensions: 262630
Number of sequences better than 100.0: 92
Number of HSP's better than 100.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 262520
Number of HSP's gapped (non-prelim): 101
length of query: 99
length of database: 8,064,228,071
effective HSP length: 68
effective length of query: 31
effective length of database: 6,468,732,579
effective search space: 200530709949
effective search space used: 200530709949
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)