Query 034296
Match_columns 99
No_of_seqs 110 out of 1062
Neff 6.4
Searched_HMMs 46136
Date Fri Mar 29 11:55:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034296.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/034296hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF00043 GST_C: Glutathione S- 99.4 3.6E-13 7.8E-18 84.6 4.9 59 7-65 30-95 (95)
2 cd03188 GST_C_Beta GST_C famil 99.3 4E-12 8.8E-17 81.7 5.4 58 8-65 46-108 (114)
3 cd03189 GST_C_GTT1_like GST_C 99.3 4.8E-12 1E-16 82.5 5.5 58 8-65 57-119 (119)
4 cd03207 GST_C_8 GST_C family, 99.3 6.2E-12 1.3E-16 80.4 5.8 58 8-65 33-94 (103)
5 cd03180 GST_C_2 GST_C family, 99.3 7.8E-12 1.7E-16 79.9 5.9 57 9-65 47-108 (110)
6 cd03200 GST_C_JTV1 GST_C famil 99.3 1.2E-11 2.7E-16 79.9 6.4 57 8-64 38-96 (96)
7 cd03209 GST_C_Mu GST_C family, 99.3 6.3E-12 1.4E-16 83.1 5.0 58 8-65 38-101 (121)
8 cd03206 GST_C_7 GST_C family, 99.3 1.2E-11 2.5E-16 79.1 5.8 57 9-65 37-98 (100)
9 cd03196 GST_C_5 GST_C family, 99.2 1.5E-11 3.2E-16 81.4 5.7 57 9-65 45-109 (115)
10 cd03187 GST_C_Phi GST_C family 99.2 1.3E-11 2.9E-16 79.8 5.0 57 9-65 49-112 (118)
11 cd03182 GST_C_GTT2_like GST_C 99.2 2.6E-11 5.6E-16 78.7 5.8 57 9-65 53-115 (117)
12 cd03190 GST_C_ECM4_like GST_C 99.2 1.9E-11 4.2E-16 83.5 4.7 65 9-73 41-120 (142)
13 cd03186 GST_C_SspA GST_N famil 99.2 3.6E-11 7.9E-16 77.3 5.7 57 9-65 39-101 (107)
14 cd03204 GST_C_GDAP1 GST_C fami 99.2 3E-11 6.5E-16 80.8 5.4 58 8-65 32-109 (111)
15 cd03177 GST_C_Delta_Epsilon GS 99.2 3.4E-11 7.4E-16 78.9 5.6 60 9-68 42-108 (118)
16 PF13410 GST_C_2: Glutathione 99.2 1.7E-11 3.8E-16 73.5 3.8 53 8-60 9-69 (69)
17 PRK13972 GSH-dependent disulfi 99.2 1.6E-11 3.6E-16 87.9 3.7 66 9-74 136-208 (215)
18 PF14497 GST_C_3: Glutathione 99.2 1.9E-11 4.1E-16 78.3 3.6 57 7-63 37-99 (99)
19 cd03198 GST_C_CLIC GST_C famil 99.2 3.8E-11 8.2E-16 82.8 5.3 57 9-65 33-116 (134)
20 cd03185 GST_C_Tau GST_C family 99.2 4.7E-11 1E-15 78.4 5.4 57 9-65 39-107 (126)
21 cd03191 GST_C_Zeta GST_C famil 99.2 6E-11 1.3E-15 77.8 5.6 57 9-65 48-111 (121)
22 cd03193 GST_C_Metaxin GST_C fa 99.1 5.8E-11 1.3E-15 74.4 4.5 55 8-62 22-88 (88)
23 cd03179 GST_C_1 GST_C family, 99.1 8.8E-11 1.9E-15 74.6 5.1 55 8-62 46-105 (105)
24 cd03202 GST_C_etherase_LigE GS 99.1 1E-10 2.2E-15 78.3 5.4 55 9-63 62-123 (124)
25 cd03208 GST_C_Alpha GST_C fami 99.1 8.3E-11 1.8E-15 80.2 5.0 58 8-65 42-107 (137)
26 TIGR01262 maiA maleylacetoacet 99.1 1E-10 2.2E-15 82.9 5.6 64 9-72 133-205 (210)
27 cd03210 GST_C_Pi GST_C family, 99.1 9.1E-11 2E-15 78.2 4.8 57 9-65 39-104 (126)
28 cd03178 GST_C_Ure2p_like GST_C 99.1 5.2E-11 1.1E-15 76.8 3.3 58 8-65 43-106 (113)
29 cd03183 GST_C_Theta GST_C fami 99.1 2E-10 4.3E-15 75.8 5.9 57 9-65 49-114 (126)
30 cd03201 GST_C_DHAR GST_C famil 99.1 1.1E-10 2.3E-15 78.3 4.5 57 9-65 34-102 (121)
31 PRK10542 glutathionine S-trans 99.1 2.2E-10 4.9E-15 80.6 6.2 58 8-65 127-189 (201)
32 cd03184 GST_C_Omega GST_C fami 99.1 2.1E-10 4.5E-15 76.1 5.1 57 9-65 36-105 (124)
33 cd03181 GST_C_EFB1gamma GST_C 99.1 1.6E-10 3.5E-15 75.5 4.0 57 9-65 44-108 (123)
34 PLN02473 glutathione S-transfe 99.1 2.1E-10 4.5E-15 81.8 4.9 57 9-65 139-203 (214)
35 PRK10387 glutaredoxin 2; Provi 99.1 5.2E-10 1.1E-14 79.2 6.6 56 9-65 146-205 (210)
36 cd00299 GST_C_family Glutathio 99.0 3.5E-10 7.6E-15 70.2 4.5 53 9-61 40-100 (100)
37 PRK09481 sspA stringent starva 99.0 5.1E-10 1.1E-14 80.3 5.7 57 9-65 131-194 (211)
38 PLN02395 glutathione S-transfe 99.0 4.9E-10 1.1E-14 79.8 5.5 56 10-65 139-202 (215)
39 PTZ00057 glutathione s-transfe 99.0 4.2E-10 9.2E-15 80.4 5.1 58 8-65 126-191 (205)
40 COG0625 Gst Glutathione S-tran 99.0 9.3E-10 2E-14 78.5 5.9 58 8-65 134-196 (211)
41 cd03203 GST_C_Lambda GST_C fam 99.0 4.9E-10 1.1E-14 74.4 3.8 57 8-65 33-103 (120)
42 PRK11752 putative S-transferas 99.0 1.3E-09 2.8E-14 81.4 5.7 57 9-65 182-250 (264)
43 cd03192 GST_C_Sigma_like GST_C 98.9 1E-09 2.2E-14 70.1 3.8 54 8-61 42-104 (104)
44 PLN02378 glutathione S-transfe 98.9 1.8E-09 3.9E-14 77.8 5.1 64 9-72 122-200 (213)
45 PRK10357 putative glutathione 98.9 3.2E-09 7E-14 75.0 5.6 56 9-65 129-192 (202)
46 cd03194 GST_C_3 GST_C family, 98.9 4.7E-09 1E-13 69.3 5.7 55 10-65 46-106 (114)
47 PLN02907 glutamate-tRNA ligase 98.9 4.7E-09 1E-13 88.5 6.5 57 9-65 94-158 (722)
48 cd03195 GST_C_4 GST_C family, 98.9 2.6E-09 5.6E-14 70.4 3.9 58 10-69 47-110 (114)
49 cd03197 GST_C_mPGES2 GST_C fam 98.8 3.2E-09 6.9E-14 74.6 4.2 54 10-63 81-145 (149)
50 TIGR00862 O-ClC intracellular 98.8 4.7E-09 1E-13 78.1 4.8 63 10-72 128-221 (236)
51 TIGR02182 GRXB Glutaredoxin, G 98.8 1.3E-08 2.8E-13 73.2 5.7 56 9-65 145-204 (209)
52 cd03205 GST_C_6 GST_C family, 98.8 8.2E-09 1.8E-13 65.8 3.9 51 8-61 40-98 (98)
53 cd03211 GST_C_Metaxin2 GST_C f 98.8 9.1E-09 2E-13 69.4 4.2 54 9-62 61-126 (126)
54 KOG0867 Glutathione S-transfer 98.8 1.5E-08 3.2E-13 74.4 5.4 58 8-65 136-201 (226)
55 PLN02817 glutathione dehydroge 98.8 1.1E-08 2.4E-13 77.0 4.7 56 10-65 176-243 (265)
56 cd03212 GST_C_Metaxin1_3 GST_C 98.7 1.5E-08 3.3E-13 69.4 4.6 56 9-64 68-135 (137)
57 PRK15113 glutathione S-transfe 98.5 4.2E-07 9.1E-12 65.2 6.0 56 9-65 141-200 (214)
58 KOG0406 Glutathione S-transfer 98.1 5E-06 1.1E-10 62.1 5.1 57 9-65 133-203 (231)
59 KOG4420 Uncharacterized conser 98.1 3.9E-06 8.4E-11 64.2 4.1 59 10-68 210-283 (325)
60 COG0435 ECM4 Predicted glutath 98.0 5.5E-06 1.2E-10 63.7 3.8 55 11-65 211-278 (324)
61 KOG4244 Failed axon connection 97.9 6.4E-06 1.4E-10 62.7 2.8 55 10-64 208-273 (281)
62 KOG1668 Elongation factor 1 be 97.8 1.6E-05 3.5E-10 59.3 3.1 64 2-65 1-65 (231)
63 KOG1695 Glutathione S-transfer 97.8 4.9E-05 1.1E-09 55.9 5.6 59 7-65 125-192 (206)
64 KOG0868 Glutathione S-transfer 97.7 2.5E-05 5.4E-10 57.0 3.2 57 9-65 136-199 (217)
65 KOG2903 Predicted glutathione 97.7 1.5E-05 3.3E-10 61.0 1.6 53 11-63 209-277 (319)
66 KOG1422 Intracellular Cl- chan 97.5 8.9E-05 1.9E-09 54.9 2.7 56 10-65 128-197 (221)
67 KOG3027 Mitochondrial outer me 96.9 0.0011 2.3E-08 49.6 3.5 56 10-65 182-249 (257)
68 PF04399 Glutaredoxin2_C: Glut 96.9 0.0022 4.7E-08 44.2 4.7 57 8-65 62-122 (132)
69 cd03199 GST_C_GRX2 GST_C famil 96.5 0.011 2.4E-07 40.6 5.9 56 9-65 64-123 (128)
70 KOG1147 Glutamyl-tRNA syntheta 96.3 0.0024 5.2E-08 53.3 2.3 51 9-59 92-150 (712)
71 KOG3029 Glutathione S-transfer 96.2 0.0057 1.2E-07 47.7 3.6 56 9-64 289-355 (370)
72 KOG3028 Translocase of outer m 96.1 0.016 3.4E-07 45.2 5.6 56 10-65 168-235 (313)
73 PF14834 GST_C_4: Glutathione 94.7 0.078 1.7E-06 36.0 4.6 55 10-65 48-106 (117)
74 PF11801 Tom37_C: Tom37 C-term 94.0 0.096 2.1E-06 37.2 4.0 49 10-58 113-167 (168)
75 COG2999 GrxB Glutaredoxin 2 [P 79.2 6.1 0.00013 29.2 5.2 57 8-65 145-205 (215)
76 PHA03308 transcriptional regul 29.8 19 0.00042 32.0 0.2 9 90-98 1415-1423(1463)
77 COG2442 Uncharacterized conser 25.8 34 0.00073 21.5 0.8 35 20-54 19-56 (79)
78 PF14786 Death_2: Tube Death d 25.4 1.5E+02 0.0033 20.6 4.0 38 50-87 90-136 (137)
79 PF00392 GntR: Bacterial regul 23.0 71 0.0015 18.3 1.8 48 11-64 3-51 (64)
80 COG4967 PilV Tfp pilus assembl 21.3 47 0.001 23.7 0.9 28 70-97 104-131 (162)
81 PF08127 Propeptide_C1: Peptid 20.7 1.6E+02 0.0034 16.0 2.8 20 11-32 3-22 (41)
No 1
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.40 E-value=3.6e-13 Score=84.60 Aligned_cols=59 Identities=24% Similarity=0.494 Sum_probs=50.9
Q ss_pred cchHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC-----C-C-CCChhHHHHHHHHhhcc
Q 034296 7 DLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK-----P-A-DSFPNASRWYDSVSSHI 65 (99)
Q Consensus 7 ~~~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~-----~-~-~~~P~L~rW~~~m~s~~ 65 (99)
...+.+.|+.+|+.|++++|++|+++|+||+.++..+..+ . . ++||+|.+|+++|.++|
T Consensus 30 ~~~~~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 30 RAKVPRYLEVLEKRLKGGPYLVGDKLTIADIALFPMLDWLERLGPDFLFEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHHTTTTTHTTSHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHHHHHcCCCeeeccCCchhHHHHHHHHHHHHHhCCCcccccCHHHHHHHHHHHcCC
Confidence 3456788999999999999999999999999999998753 2 4 78999999999999986
No 2
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.31 E-value=4e-12 Score=81.72 Aligned_cols=58 Identities=19% Similarity=0.361 Sum_probs=50.1
Q ss_pred chHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC-----CCCCChhHHHHHHHHhhcc
Q 034296 8 LHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK-----PADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 8 ~~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~-----~~~~~P~L~rW~~~m~s~~ 65 (99)
.++.+.++.||++|++++|++|+++|+|||+++..+... +.+++|+|.+|+++|.++|
T Consensus 46 ~~~~~~l~~le~~l~~~~~l~G~~~t~aDi~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p 108 (114)
T cd03188 46 ERLAARLAYLDAQLAGGPYLLGDRFSVADAYLFVVLRWAPGVGLDLSDWPNLAAYLARVAARP 108 (114)
T ss_pred HHHHHHHHHHHHHhcCCCeeeCCCcchHHHHHHHHHHHHhhcCCChhhChHHHHHHHHHHhCH
Confidence 356778889999999899999999999999999877532 3467999999999999987
No 3
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.30 E-value=4.8e-12 Score=82.53 Aligned_cols=58 Identities=21% Similarity=0.369 Sum_probs=50.0
Q ss_pred chHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC-----CCCCChhHHHHHHHHhhcc
Q 034296 8 LHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK-----PADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 8 ~~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~-----~~~~~P~L~rW~~~m~s~~ 65 (99)
.++.+.|+.||++|++++|++|+++|+|||+++..+... ..+++|+|.+|+++|.++|
T Consensus 57 ~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 57 PELKKHLDFLEDRLAKKGYFVGDKLTAADIMMSFPLEAALARGPLLEKYPNIAAYLERIEARP 119 (119)
T ss_pred HHHHHHHHHHHHHHccCCCCCCCCCCHHHHHHHHHHHHHHHcCcccccCchHHHHHHHHhcCC
Confidence 357888999999999999999999999999998766432 3578999999999999875
No 4
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.30 E-value=6.2e-12 Score=80.42 Aligned_cols=58 Identities=17% Similarity=0.196 Sum_probs=51.1
Q ss_pred chHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC----CCCCChhHHHHHHHHhhcc
Q 034296 8 LHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK----PADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 8 ~~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~----~~~~~P~L~rW~~~m~s~~ 65 (99)
.++.+.++.||++|++++|++|+++|+|||++++.+... ..+++|+|.+|+++|.++|
T Consensus 33 ~~~~~~l~~le~~l~~~~~l~g~~~t~aDi~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p 94 (103)
T cd03207 33 GSYDDVLAALEQALAKGPYLLGERFTAADVLVGSPLGWGLQFGLLPERPAFDAYIARITDRP 94 (103)
T ss_pred hhHHHHHHHHHHHHccCCcccCCccCHHHHHHHHHHHHHHHcCCCCCChHHHHHHHHHHcCH
Confidence 346889999999999999999999999999999877543 2468999999999999998
No 5
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.29 E-value=7.8e-12 Score=79.92 Aligned_cols=57 Identities=23% Similarity=0.441 Sum_probs=49.5
Q ss_pred hHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhc-C----CCCCChhHHHHHHHHhhcc
Q 034296 9 HTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLV-K----PADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 9 ~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~-~----~~~~~P~L~rW~~~m~s~~ 65 (99)
++.+.|+.||++|++++|++|+++|+|||++++.+.. . +.+++|+|.+|+++|.++|
T Consensus 47 ~~~~~l~~lE~~L~~~~~l~g~~~t~aDi~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p 108 (110)
T cd03180 47 AWAKLMAILDAQLAGRPYLAGDRFTLADIPLGCSAYRWFELPIERPPLPHLERWYARLRARP 108 (110)
T ss_pred HHHHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHHHHHHcccccccCchHHHHHHHHHhCC
Confidence 5678899999999999999999999999999877632 1 3578999999999999876
No 6
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.28 E-value=1.2e-11 Score=79.87 Aligned_cols=57 Identities=23% Similarity=0.415 Sum_probs=49.5
Q ss_pred chHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC--CCCCChhHHHHHHHHhhc
Q 034296 8 LHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK--PADSFPNASRWYDSVSSH 64 (99)
Q Consensus 8 ~~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~--~~~~~P~L~rW~~~m~s~ 64 (99)
.+.++.++.||++|++++|++|+++|+|||++++.+... ..+.+|||.+|+++|.++
T Consensus 38 ~~~~~~l~~le~~L~~~~fl~Gd~~tiADi~l~~~l~~~~~~~~~~p~l~~w~~r~~~~ 96 (96)
T cd03200 38 KEKAAVLRALNSALGRSPWLVGSEFTVADIVSWCALLQTGLASAAPANVQRWLKSCENL 96 (96)
T ss_pred HHHHHHHHHHHHHHcCCCccCCCCCCHHHHHHHHHHHHcccccccChHHHHHHHHHHhC
Confidence 456789999999999999999999999999999888654 245799999999999863
No 7
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.27 E-value=6.3e-12 Score=83.14 Aligned_cols=58 Identities=21% Similarity=0.398 Sum_probs=50.3
Q ss_pred chHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC------CCCCChhHHHHHHHHhhcc
Q 034296 8 LHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK------PADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 8 ~~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~------~~~~~P~L~rW~~~m~s~~ 65 (99)
....+.++.||++|++++|++|+++|+||+.++..+... .+++||+|.+|+++|.++|
T Consensus 38 ~~~~~~l~~le~~L~~~~~l~G~~~T~aDi~l~~~~~~~~~~~~~~~~~~P~l~~~~~rv~~~p 101 (121)
T cd03209 38 AKLPDKLKLFSDFLGDRPWFAGDKITYVDFLLYEALDQHRIFEPDCLDAFPNLKDFLERFEALP 101 (121)
T ss_pred HHHHHHHHHHHHHhCCCCCcCCCCccHHHHHHHHHHHHHHHhCccccccChHHHHHHHHHHHCH
Confidence 345778999999999999999999999999999776432 2568999999999999999
No 8
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.27 E-value=1.2e-11 Score=79.12 Aligned_cols=57 Identities=23% Similarity=0.528 Sum_probs=49.5
Q ss_pred hHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC-----CCCCChhHHHHHHHHhhcc
Q 034296 9 HTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK-----PADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 9 ~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~-----~~~~~P~L~rW~~~m~s~~ 65 (99)
++.+.++.+|++|++++|++|+++|+|||.++..+... ..+++|+|.+|+++|.++|
T Consensus 37 ~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p 98 (100)
T cd03206 37 RAHRLLRLLEEHLAGRDWLAGDRPTIADVAVYPYVALAPEGGVDLEDYPAIRRWLARIEALP 98 (100)
T ss_pred HHHHHHHHHHHHHccCCccCCCCCCHHHHHHHHHHHHHhccCCChhhCcHHHHHHHHHHhCc
Confidence 56778999999999999999999999999998877432 3568999999999999876
No 9
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.25 E-value=1.5e-11 Score=81.39 Aligned_cols=57 Identities=23% Similarity=0.409 Sum_probs=49.7
Q ss_pred hHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC--------CCCCChhHHHHHHHHhhcc
Q 034296 9 HTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK--------PADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 9 ~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~--------~~~~~P~L~rW~~~m~s~~ 65 (99)
++.+.++.||++|++++|++|+++|+||+++++.+... +.++||+|.+|+++|.++|
T Consensus 45 ~i~~~l~~le~~L~~~~yl~Gd~~tlADi~l~~~l~~~~~~~~~~~~~~~~P~L~~w~~r~~~rp 109 (115)
T cd03196 45 QAEAFLKDLEARLQQHSYLLGDKPSLADWAIFPFVRQFAHVDPKWFDQSPYPRLRRWLNGFLASP 109 (115)
T ss_pred HHHHHHHHHHHHHccCCccCCCCccHHHHHHHHHHHHHHHhhhcccCcccCHHHHHHHHHHHcCh
Confidence 56888999999999999999999999999999765321 2478999999999999988
No 10
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.24 E-value=1.3e-11 Score=79.85 Aligned_cols=57 Identities=21% Similarity=0.374 Sum_probs=49.0
Q ss_pred hHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC-------CCCCChhHHHHHHHHhhcc
Q 034296 9 HTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK-------PADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 9 ~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~-------~~~~~P~L~rW~~~m~s~~ 65 (99)
++.+.++.||++|++++|++|+++|+|||++++.+... ..+++|+|.+|+++|.++|
T Consensus 49 ~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p 112 (118)
T cd03187 49 KLKKVLDVYEARLSKSKYLAGDSFTLADLSHLPYLQYLMATPFAKLFDSRPHVKAWWEDISARP 112 (118)
T ss_pred HHHHHHHHHHHHcccCcccCCCCccHHHHHHHHHHHHHHHccchhhhhcCchHHHHHHHHHhCH
Confidence 56778899999999999999999999999998766321 2467999999999999987
No 11
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.22 E-value=2.6e-11 Score=78.70 Aligned_cols=57 Identities=23% Similarity=0.501 Sum_probs=49.3
Q ss_pred hHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC-----CC-CCChhHHHHHHHHhhcc
Q 034296 9 HTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK-----PA-DSFPNASRWYDSVSSHI 65 (99)
Q Consensus 9 ~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~-----~~-~~~P~L~rW~~~m~s~~ 65 (99)
++++.|+.||+.|++++|++|+++|+|||++++.+... ++ +++|+|.+|+++|.++|
T Consensus 53 ~l~~~l~~le~~L~~~~~l~gd~~t~aDi~l~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p 115 (117)
T cd03182 53 RAADFLAYLDTRLAGSPYVAGDRFTIADITAFVGLDFAKVVKLRVPEELTHLRAWYDRMAARP 115 (117)
T ss_pred HHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHhHHHHhcCCCCccccHHHHHHHHHHHhcc
Confidence 46778999999999999999999999999999887532 33 58999999999999875
No 12
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.20 E-value=1.9e-11 Score=83.47 Aligned_cols=65 Identities=20% Similarity=0.362 Sum_probs=52.5
Q ss_pred hHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC-------------CCCCChhHHHHHHHHhhcc--CCCCCCCC
Q 034296 9 HTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK-------------PADSFPNASRWYDSVSSHI--APSFPGKA 73 (99)
Q Consensus 9 ~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~-------------~~~~~P~L~rW~~~m~s~~--~~~~~~~~ 73 (99)
+..+.|+.||++|++++|++|+++|+||++++..+... ..++||+|.+|+++|.++| .+....+.
T Consensus 41 ~l~~~l~~LE~~L~~~~yl~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~P~~k~~~~~~~ 120 (142)
T cd03190 41 ELFEALDRLEELLSDRRYLLGDRLTEADIRLFTTLIRFDAVYVQHFKCNLKRIRDYPNLWNYLRRLYQNPGVAETTNFDH 120 (142)
T ss_pred HHHHHHHHHHHHHccCCeeeCCCccHHHHHHHHHHHHHHHHhhhhcccccchhhhCchHHHHHHHHhcCchHhhhcCHHH
Confidence 56778899999999999999999999999999776421 1357999999999999999 44444433
No 13
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.20 E-value=3.6e-11 Score=77.29 Aligned_cols=57 Identities=11% Similarity=0.103 Sum_probs=49.6
Q ss_pred hHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhc---C--CC-CCChhHHHHHHHHhhcc
Q 034296 9 HTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLV---K--PA-DSFPNASRWYDSVSSHI 65 (99)
Q Consensus 9 ~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~---~--~~-~~~P~L~rW~~~m~s~~ 65 (99)
.+.+.|..||++|++++|++|+++|+|||+++..+.. . ++ +.+|+|.+|+++|.++|
T Consensus 39 ~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~rp 101 (107)
T cd03186 39 ELRESLLALAPVFAHKPYFMSEEFSLVDCALAPLLWRLPALGIELPKQAKPLKDYMERVFARD 101 (107)
T ss_pred HHHHHHHHHHHHHcCCCcccCCCCcHHHHHHHHHHHHHHHcCCCCcccchHHHHHHHHHHCCH
Confidence 4677899999999999999999999999999988752 2 23 47999999999999998
No 14
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.20 E-value=3e-11 Score=80.78 Aligned_cols=58 Identities=19% Similarity=0.264 Sum_probs=48.6
Q ss_pred chHHHHHHHHHHhcCCC----------ceeecCCCCHHHHHHHHHHhcC-----CC-----CCChhHHHHHHHHhhcc
Q 034296 8 LHTESGLKSLDQYLSGK----------SYISGNQLTKDDIKVYAAVLVK-----PA-----DSFPNASRWYDSVSSHI 65 (99)
Q Consensus 8 ~~~~~~L~~Le~~L~~~----------~yl~G~~~TiADi~l~~~l~~~-----~~-----~~~P~L~rW~~~m~s~~ 65 (99)
.+++..|+.||++|+++ +|++|+++|+|||++++.+... +. ++||+|.+|+++|.++|
T Consensus 32 ~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~P~l~~w~~rv~aRp 109 (111)
T cd03204 32 DELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFLGLSRRYWGNGKRPNLEAYFERVLQRE 109 (111)
T ss_pred HHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHcCccccccccccChHHHHHHHHHHcCC
Confidence 35678899999999865 4999999999999999887532 22 47999999999999986
No 15
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.20 E-value=3.4e-11 Score=78.91 Aligned_cols=60 Identities=27% Similarity=0.522 Sum_probs=50.8
Q ss_pred hHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhc----C--CCCCChhHHHHHHHHhhcc-CCC
Q 034296 9 HTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLV----K--PADSFPNASRWYDSVSSHI-APS 68 (99)
Q Consensus 9 ~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~----~--~~~~~P~L~rW~~~m~s~~-~~~ 68 (99)
++.+.|+.||++|++++|++|+++|+||++++..+.. . +.+++|+|.+|+++|.+++ +..
T Consensus 42 ~~~~~l~~le~~L~~~~~l~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~ 108 (118)
T cd03177 42 KLEEALDFLETFLEGSDYVAGDQLTIADLSLVATVSTLEALLPLDLSKYPNVRAWLERLKALPPYEE 108 (118)
T ss_pred HHHHHHHHHHHHHccCCeeCCCCcCHHHHHHHHHHHHHHHhcCCChhhCchHHHHHHHHHcccchHH
Confidence 4578899999999988999999999999999977642 2 3457999999999999998 443
No 16
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.20 E-value=1.7e-11 Score=73.52 Aligned_cols=53 Identities=21% Similarity=0.475 Sum_probs=44.1
Q ss_pred chHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC-----C---CCCChhHHHHHHH
Q 034296 8 LHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK-----P---ADSFPNASRWYDS 60 (99)
Q Consensus 8 ~~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~-----~---~~~~P~L~rW~~~ 60 (99)
......++.||++|++++|+.|++||+||+.++..+... + .+.+|+|.+|++|
T Consensus 9 ~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 9 AQLEAALDALEDHLADGPFLFGDRPSLADIALAPFLWRLRFVGPDFDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCTHTCCHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhCcCcCccccCHHHHHHHhC
Confidence 346788999999999999999999999999999998743 1 3689999999986
No 17
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.18 E-value=1.6e-11 Score=87.95 Aligned_cols=66 Identities=15% Similarity=0.309 Sum_probs=52.9
Q ss_pred hHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhc-----CCCCCChhHHHHHHHHhhcc--CCCCCCCCc
Q 034296 9 HTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLV-----KPADSFPNASRWYDSVSSHI--APSFPGKAV 74 (99)
Q Consensus 9 ~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~-----~~~~~~P~L~rW~~~m~s~~--~~~~~~~~~ 74 (99)
++.+.+..||++|++++|++|+++|+|||+++..+.. .+.++||+|.+|+++|.++| .+++..++.
T Consensus 136 ~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~~~~~~~P~l~~w~~r~~~rp~~~~~~~~~~~ 208 (215)
T PRK13972 136 ETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQRIDLAMYPAVKNWHERIRSRPATGQALLKAQL 208 (215)
T ss_pred HHHHHHHHHHHHhccCccccCCCCCHHHHHHHHHHHHHhhcCCcchhCHHHHHHHHHHHhCHHHHHHHHHhcc
Confidence 4566889999999999999999999999998776532 13578999999999999999 344444443
No 18
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.18 E-value=1.9e-11 Score=78.27 Aligned_cols=57 Identities=25% Similarity=0.518 Sum_probs=46.6
Q ss_pred cchHHHHHHHHHHhcCCCc--eeecCCCCHHHHHHHHHHhcC--C-C-CCChhHHHHHHHHhh
Q 034296 7 DLHTESGLKSLDQYLSGKS--YISGNQLTKDDIKVYAAVLVK--P-A-DSFPNASRWYDSVSS 63 (99)
Q Consensus 7 ~~~~~~~L~~Le~~L~~~~--yl~G~~~TiADi~l~~~l~~~--~-~-~~~P~L~rW~~~m~s 63 (99)
..++.+.++.+|++|++++ ||+|++||+||+.+|..+... . . ++||||.+|++||++
T Consensus 37 ~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~~~~~~~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 37 REELPKALKILEKHLAERGGDFLVGDKPTLADIAVFGFLASLRWADFPKDYPNLVRWYERIEE 99 (99)
T ss_dssp HHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHHHHHHHHCCHHTTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHHHHHHHhhcccccccHHHHHHHHhhcC
Confidence 4566889999999999888 999999999999999988432 2 2 489999999999974
No 19
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.18 E-value=3.8e-11 Score=82.76 Aligned_cols=57 Identities=19% Similarity=0.353 Sum_probs=49.1
Q ss_pred hHHHHHHHHHHhcCC----------------CceeecCCCCHHHHHHHHHHhc----------CCC-CCChhHHHHHHHH
Q 034296 9 HTESGLKSLDQYLSG----------------KSYISGNQLTKDDIKVYAAVLV----------KPA-DSFPNASRWYDSV 61 (99)
Q Consensus 9 ~~~~~L~~Le~~L~~----------------~~yl~G~~~TiADi~l~~~l~~----------~~~-~~~P~L~rW~~~m 61 (99)
.+.+.|+.||++|++ ++||+|+++|+||+.++..+.. .++ ++||||.+|+++|
T Consensus 33 ~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~~~~~~~g~~i~~~~P~L~aw~~ri 112 (134)
T cd03198 33 GLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFEIPADLTGLWRYLKNA 112 (134)
T ss_pred HHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCccccCHHHHHHHHHH
Confidence 467789999999986 7899999999999999988652 133 6899999999999
Q ss_pred hhcc
Q 034296 62 SSHI 65 (99)
Q Consensus 62 ~s~~ 65 (99)
.++|
T Consensus 113 ~aRP 116 (134)
T cd03198 113 YQRE 116 (134)
T ss_pred HCCH
Confidence 9998
No 20
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.18 E-value=4.7e-11 Score=78.37 Aligned_cols=57 Identities=19% Similarity=0.269 Sum_probs=49.3
Q ss_pred hHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC------------CCCCChhHHHHHHHHhhcc
Q 034296 9 HTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK------------PADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 9 ~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~------------~~~~~P~L~rW~~~m~s~~ 65 (99)
.+.+.++.||++|++++|++|+++|+|||+++..+... +.+++|++.+|+++|.++|
T Consensus 39 ~~~~~l~~le~~L~~~~~l~G~~~t~ADi~l~~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p 107 (126)
T cd03185 39 EALEALKVLEEELGGKPFFGGDTIGYVDIALGSFLGWFRAYEEVGGVKLLDEEKTPLLAAWAERFLELE 107 (126)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHcCccccCcccCchHHHHHHHHHhcc
Confidence 45788999999999899999999999999998766431 1367999999999999998
No 21
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.17 E-value=6e-11 Score=77.78 Aligned_cols=57 Identities=18% Similarity=0.288 Sum_probs=49.0
Q ss_pred hHHHHHHHHHHhcC--CCceeecCCCCHHHHHHHHHHhcC-----CCCCChhHHHHHHHHhhcc
Q 034296 9 HTESGLKSLDQYLS--GKSYISGNQLTKDDIKVYAAVLVK-----PADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 9 ~~~~~L~~Le~~L~--~~~yl~G~~~TiADi~l~~~l~~~-----~~~~~P~L~rW~~~m~s~~ 65 (99)
.+.+.|+.||++|+ +.+|++|+++|+|||+++..+... +++++|+|.+|+++|.++|
T Consensus 48 ~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p 111 (121)
T cd03191 48 WIARGFAALEKLLAQTAGKFCFGDEPTLADICLVPQVYNARRFGVDLSPYPTIARINEACLELP 111 (121)
T ss_pred HHHHHHHHHHHHHHhcCCCeecCCcCCHHHHHHHHHHHHHHHhCCCcccCcHHHHHHHHHHhCh
Confidence 35788999999997 457999999999999999886532 3578999999999999998
No 22
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.14 E-value=5.8e-11 Score=74.40 Aligned_cols=55 Identities=22% Similarity=0.425 Sum_probs=46.4
Q ss_pred chHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC-----C-------CCCChhHHHHHHHHh
Q 034296 8 LHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK-----P-------ADSFPNASRWYDSVS 62 (99)
Q Consensus 8 ~~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~-----~-------~~~~P~L~rW~~~m~ 62 (99)
.+..+.++.||+.|++++|+.|+++|+||++++..+... . ++++|+|.+|+++|.
T Consensus 22 ~~~~~~l~~le~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 22 SLAKKDLKALSDLLGDKKFFFGDKPTSLDATVFGHLASILYAPLPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHhCCCCccCCCCCCHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHHhC
Confidence 356789999999999999999999999999999876432 1 257999999999974
No 23
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.13 E-value=8.8e-11 Score=74.58 Aligned_cols=55 Identities=24% Similarity=0.458 Sum_probs=47.1
Q ss_pred chHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC-----CCCCChhHHHHHHHHh
Q 034296 8 LHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK-----PADSFPNASRWYDSVS 62 (99)
Q Consensus 8 ~~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~-----~~~~~P~L~rW~~~m~ 62 (99)
.++++.++.||+.|++++|+.|+++|+|||++++.+... +.+++|+|.+|+++|+
T Consensus 46 ~~~~~~l~~le~~L~~~~~l~g~~~slaDi~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~ 105 (105)
T cd03179 46 ERGHAALAVLEAHLAGRDFLVGDALTIADIALAAYTHVADEGGFDLADYPAIRAWLARIE 105 (105)
T ss_pred HHHHHHHHHHHHHHccCccccCCCCCHHHHHHHHHHHhccccCCChHhCccHHHHHHhhC
Confidence 356778899999999899999999999999999888653 2457999999999874
No 24
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.13 E-value=1e-10 Score=78.33 Aligned_cols=55 Identities=16% Similarity=0.360 Sum_probs=47.6
Q ss_pred hHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC------C-CCCChhHHHHHHHHhh
Q 034296 9 HTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK------P-ADSFPNASRWYDSVSS 63 (99)
Q Consensus 9 ~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~------~-~~~~P~L~rW~~~m~s 63 (99)
..++.|+.||++|++++|+.|+++|+||+.++..+... + .+++|+|.+|+++|.+
T Consensus 62 ~~~~~l~~l~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~~~~~~~~~~~p~l~~W~~r~~~ 123 (124)
T cd03202 62 NFRAALEPLRATLKGQPFLGGAAPNYADYIVFGGFQWARIVSPFPLLEEDDPVYDWFERCLD 123 (124)
T ss_pred HHHHHHHHHHHHHcCCCccCCCCCchhHHHHHHHHHHHHHcCcccccccCChHHHHHHHHhc
Confidence 45778999999999999999999999999999887532 3 4689999999999986
No 25
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.13 E-value=8.3e-11 Score=80.19 Aligned_cols=58 Identities=21% Similarity=0.402 Sum_probs=50.1
Q ss_pred chHHHHHHHHHHhcC--CCceeecCCCCHHHHHHHHHHhcC------CCCCChhHHHHHHHHhhcc
Q 034296 8 LHTESGLKSLDQYLS--GKSYISGNQLTKDDIKVYAAVLVK------PADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 8 ~~~~~~L~~Le~~L~--~~~yl~G~~~TiADi~l~~~l~~~------~~~~~P~L~rW~~~m~s~~ 65 (99)
....+.|+.||++|+ +++|++|+++|+||+.++..+... .+++||+|.+|+++|.++|
T Consensus 42 ~~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~~l~~~~~~~~~~l~~~P~l~~~~~rv~~~P 107 (137)
T cd03208 42 KAKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLEAILMVEELDPSLLSDFPLLQAFKTRISNLP 107 (137)
T ss_pred HHHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHHHHHHHHHhchhhhccChHHHHHHHHHHcCH
Confidence 345688999999998 678999999999999999887542 2478999999999999999
No 26
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.13 E-value=1e-10 Score=82.88 Aligned_cols=64 Identities=16% Similarity=0.272 Sum_probs=52.2
Q ss_pred hHHHHHHHHHHhcCC--CceeecCCCCHHHHHHHHHHhcC-----CCCCChhHHHHHHHHhhcc--CCCCCCC
Q 034296 9 HTESGLKSLDQYLSG--KSYISGNQLTKDDIKVYAAVLVK-----PADSFPNASRWYDSVSSHI--APSFPGK 72 (99)
Q Consensus 9 ~~~~~L~~Le~~L~~--~~yl~G~~~TiADi~l~~~l~~~-----~~~~~P~L~rW~~~m~s~~--~~~~~~~ 72 (99)
.+.+.|+.||++|++ .+|++|+++|+||++++..+... ++++||+|.+|+++|.+++ +..++.+
T Consensus 133 ~~~~~l~~le~~L~~~~~~~l~G~~~T~ADi~~~~~l~~~~~~~~~~~~~p~l~~~~~~~~~rp~~~~~~~~~ 205 (210)
T TIGR01262 133 WISKGFAALEALLQPHAGAFCVGDTPTLADLCLVPQVYNAERFGVDLTPYPTLRRIAAALAALPAFQRAHPEN 205 (210)
T ss_pred HHHHHHHHHHHHHhcCCCCEeeCCCCCHHHHHHHHHHHHHHHcCCCcccchHHHHHHHHHhcCHHHHHhCccc
Confidence 356789999999986 35999999999999999887532 3578999999999999999 4444433
No 27
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.12 E-value=9.1e-11 Score=78.25 Aligned_cols=57 Identities=21% Similarity=0.414 Sum_probs=48.5
Q ss_pred hHHHHHHHHHHhcCC---CceeecCCCCHHHHHHHHHHhcC------CCCCChhHHHHHHHHhhcc
Q 034296 9 HTESGLKSLDQYLSG---KSYISGNQLTKDDIKVYAAVLVK------PADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 9 ~~~~~L~~Le~~L~~---~~yl~G~~~TiADi~l~~~l~~~------~~~~~P~L~rW~~~m~s~~ 65 (99)
...+.|..||++|++ ++|++|+++|+||++++..+... ..++||+|.+|+++|.++|
T Consensus 39 ~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~~~~~~~~~~~P~l~~~~~rv~~~p 104 (126)
T cd03210 39 DLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDLLDIHLVLAPGCLDAFPLLKAFVERLSARP 104 (126)
T ss_pred HHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHHHhChHhhhcChHHHHHHHHHHhCc
Confidence 356788999999974 58999999999999999776432 2578999999999999999
No 28
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.11 E-value=5.2e-11 Score=76.81 Aligned_cols=58 Identities=28% Similarity=0.552 Sum_probs=50.1
Q ss_pred chHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC-----C-CCCChhHHHHHHHHhhcc
Q 034296 8 LHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK-----P-ADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 8 ~~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~-----~-~~~~P~L~rW~~~m~s~~ 65 (99)
.++.+.|+.+|+.|++++|++|+++|+|||+++..+... + .+++|+|.+|+++|.++|
T Consensus 43 ~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p 106 (113)
T cd03178 43 NEAKRLYGVLDKRLAGRDYLAGDEYSIADIAIFPWVRRLEWIGIDDLDDFPNVKRWLDRIAARP 106 (113)
T ss_pred HHHHHHHHHHHHHHccCCcccCCCCCeeeeeHHHHHHHHHhccccchhhchHHHHHHHHHhhCH
Confidence 356778899999999999999999999999998777532 2 467999999999999988
No 29
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.10 E-value=2e-10 Score=75.76 Aligned_cols=57 Identities=19% Similarity=0.477 Sum_probs=47.0
Q ss_pred hHHHHHHHHHHh-cCCCceeecCCCCHHHHHHHHHHhcC-----C-CCCChhHHHHHHHHhh--cc
Q 034296 9 HTESGLKSLDQY-LSGKSYISGNQLTKDDIKVYAAVLVK-----P-ADSFPNASRWYDSVSS--HI 65 (99)
Q Consensus 9 ~~~~~L~~Le~~-L~~~~yl~G~~~TiADi~l~~~l~~~-----~-~~~~P~L~rW~~~m~s--~~ 65 (99)
+..+.++.+|++ +++++|++|+++|+|||+++..+... + .+.+|+|.+|+++|.+ +|
T Consensus 49 ~~~~~l~~le~~l~~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~~~p 114 (126)
T cd03183 49 NLEESLDLLENYFLKDKPFLAGDEISIADLSAVCEIMQPEAAGYDVFEGRPKLAAWRKRVKEAGNP 114 (126)
T ss_pred HHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHhcCCcccccCchHHHHHHHHHHhcch
Confidence 356778999987 56578999999999999998776432 2 4789999999999999 66
No 30
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.10 E-value=1.1e-10 Score=78.32 Aligned_cols=57 Identities=14% Similarity=0.277 Sum_probs=47.4
Q ss_pred hHHHHHHHHHHhcCC-CceeecCCCCHHHHHHHHHHhcC----------C-CCCChhHHHHHHHHhhcc
Q 034296 9 HTESGLKSLDQYLSG-KSYISGNQLTKDDIKVYAAVLVK----------P-ADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 9 ~~~~~L~~Le~~L~~-~~yl~G~~~TiADi~l~~~l~~~----------~-~~~~P~L~rW~~~m~s~~ 65 (99)
.+.+.|..||++|++ ++|++|+++|+||+.+++.+... . .+++|+|.+|+++|.+++
T Consensus 34 ~l~~~l~~Le~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~P~l~~w~~rl~~rp 102 (121)
T cd03201 34 ALLDELEALEDHLKENGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSVPESLTSVKSYMKALFSRE 102 (121)
T ss_pred HHHHHHHHHHHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHCCc
Confidence 356788899999984 79999999999999998754311 1 268999999999999999
No 31
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.09 E-value=2.2e-10 Score=80.64 Aligned_cols=58 Identities=14% Similarity=0.296 Sum_probs=50.5
Q ss_pred chHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC-----CCCCChhHHHHHHHHhhcc
Q 034296 8 LHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK-----PADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 8 ~~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~-----~~~~~P~L~rW~~~m~s~~ 65 (99)
.+..+.|+.||++|++++|++|+++|+||++++..+... +.+.+|+|.+|+++|.++|
T Consensus 127 ~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p 189 (201)
T PRK10542 127 AQLEKKFQYVDEALADEQWICGQRFTIADAYLFTVLRWAYAVKLNLEGLEHIAAYMQRVAERP 189 (201)
T ss_pred HHHHHHHHHHHHHhcCCCeeeCCCCcHHhHHHHHHHHHhhccCCCcccchHHHHHHHHHHcCH
Confidence 346778999999999999999999999999998877543 3467999999999999998
No 32
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.08 E-value=2.1e-10 Score=76.09 Aligned_cols=57 Identities=21% Similarity=0.426 Sum_probs=48.7
Q ss_pred hHHHHHHHHHHhcCC--CceeecCCCCHHHHHHHHHHhc-----------CCCCCChhHHHHHHHHhhcc
Q 034296 9 HTESGLKSLDQYLSG--KSYISGNQLTKDDIKVYAAVLV-----------KPADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 9 ~~~~~L~~Le~~L~~--~~yl~G~~~TiADi~l~~~l~~-----------~~~~~~P~L~rW~~~m~s~~ 65 (99)
.+.+.|+.||+.|++ ++|++|+++|+||+.++..+.. .+.+++|+|.+|+++|.++|
T Consensus 36 ~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~r~~~~p 105 (124)
T cd03184 36 ELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWFERLEALKLLLGYEFPLDRFPKLKKWMDAMKEDP 105 (124)
T ss_pred HHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHHHHHHHHHhhccccCCcccChHHHHHHHHhccCh
Confidence 456788999999985 8999999999999999977642 12578999999999999998
No 33
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.06 E-value=1.6e-10 Score=75.50 Aligned_cols=57 Identities=30% Similarity=0.566 Sum_probs=49.3
Q ss_pred hHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC-----C---CCCChhHHHHHHHHhhcc
Q 034296 9 HTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK-----P---ADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 9 ~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~-----~---~~~~P~L~rW~~~m~s~~ 65 (99)
++.+.|+.||+.|++++|++|+++|+||++++..+... + ++.+|+|.+|+++|.+++
T Consensus 44 ~~~~~l~~le~~l~~~~~l~G~~~siaDi~l~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p 108 (123)
T cd03181 44 ELDRVLGVLEERLLKRTYLVGERLTLADIFVAGALLLGFTYVFDKEWRAKYPNVTRWFNTVVNQP 108 (123)
T ss_pred HHHHHHHHHHHHHccCceeccCCccHHHHHHHHHHHHHHHHHcCHHHHHhChHHHHHHHHHHcCH
Confidence 45678999999999999999999999999999777532 2 257999999999999998
No 34
>PLN02473 glutathione S-transferase
Probab=99.06 E-value=2.1e-10 Score=81.78 Aligned_cols=57 Identities=19% Similarity=0.387 Sum_probs=48.5
Q ss_pred hHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC----C----CCCChhHHHHHHHHhhcc
Q 034296 9 HTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK----P----ADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 9 ~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~----~----~~~~P~L~rW~~~m~s~~ 65 (99)
++.+.++.||++|++++|++|+++|+||++++..+... . .++||+|.+|+++|.++|
T Consensus 139 ~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p 203 (214)
T PLN02473 139 KFDKVLDVYENRLATNRYLGGDEFTLADLTHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARP 203 (214)
T ss_pred HHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHHHhccccHHHHhcCHHHHHHHHHHhcCh
Confidence 45668899999999889999999999999988776421 1 368999999999999998
No 35
>PRK10387 glutaredoxin 2; Provisional
Probab=99.05 E-value=5.2e-10 Score=79.24 Aligned_cols=56 Identities=18% Similarity=0.321 Sum_probs=48.5
Q ss_pred hHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC----CCCCChhHHHHHHHHhhcc
Q 034296 9 HTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK----PADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 9 ~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~----~~~~~P~L~rW~~~m~s~~ 65 (99)
+.++.|+.||++|++ +|++|+++|+||+.++..+... ..+.+|+|.+|++||.+++
T Consensus 146 ~~~~~l~~le~~L~~-~~l~G~~~s~ADi~l~~~l~~~~~~~~~~~~p~l~~w~~r~~~r~ 205 (210)
T PRK10387 146 EINADLRALDPLIVK-PNAVNGELSTDDIHLFPILRNLTLVKGIEWPPRVADYRDNMSKKT 205 (210)
T ss_pred HHHHHHHHHHHHhcC-ccccCCCCCHHHHHHHHHHhcceeecCCCCCHHHHHHHHHHHHHh
Confidence 456788999999987 9999999999999999998654 2345799999999999987
No 36
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.04 E-value=3.5e-10 Score=70.18 Aligned_cols=53 Identities=25% Similarity=0.619 Sum_probs=46.4
Q ss_pred hHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC-----C---CCCChhHHHHHHHH
Q 034296 9 HTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK-----P---ADSFPNASRWYDSV 61 (99)
Q Consensus 9 ~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~-----~---~~~~P~L~rW~~~m 61 (99)
+..+.++.||++|++++|+.|+++|+||+.++..+... . .+++|+|.+|+++|
T Consensus 40 ~~~~~~~~l~~~L~~~~~~~g~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~ 100 (100)
T cd00299 40 ELAAALAALEKLLAGRPYLAGDRFSLADIALAPVLARLDLLGPLLGLLDEYPRLAAWYDRL 100 (100)
T ss_pred HHHHHHHHHHHHHccCCCCCCCCcCHHHHHHHHHHHHHHHhhhhhhhhccCccHHHHHHhC
Confidence 56789999999999999999999999999999988643 2 46799999999975
No 37
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=99.02 E-value=5.1e-10 Score=80.25 Aligned_cols=57 Identities=9% Similarity=0.063 Sum_probs=49.2
Q ss_pred hHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC-----CC--CCChhHHHHHHHHhhcc
Q 034296 9 HTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK-----PA--DSFPNASRWYDSVSSHI 65 (99)
Q Consensus 9 ~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~-----~~--~~~P~L~rW~~~m~s~~ 65 (99)
.+.+.++.||++|++++|++|+++|+||++++..+... ++ ++||+|.+|+++|.++|
T Consensus 131 ~l~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~rp 194 (211)
T PRK09481 131 QLREELLAIAPVFGEKPYFMSEEFSLVDCYLAPLLWRLPVLGIELSGPGAKELKGYMTRVFERD 194 (211)
T ss_pred HHHHHHHHHHHHhccCCcccCCCccHHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHHHHhccH
Confidence 45677889999999999999999999999999887532 33 47999999999999998
No 38
>PLN02395 glutathione S-transferase
Probab=99.02 E-value=4.9e-10 Score=79.76 Aligned_cols=56 Identities=20% Similarity=0.281 Sum_probs=47.8
Q ss_pred HHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC--------CCCCChhHHHHHHHHhhcc
Q 034296 10 TESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK--------PADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 10 ~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~--------~~~~~P~L~rW~~~m~s~~ 65 (99)
+.+.++.||++|++++|++|+++|+||++++..+... .++++|+|.+|+++|.+++
T Consensus 139 ~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~rp 202 (215)
T PLN02395 139 LAKVLDVYEARLSKSKYLAGDFVSLADLAHLPFTEYLVGPIGKAYLIKDRKHVSAWWDDISSRP 202 (215)
T ss_pred HHHHHHHHHHHhcCCccccCCCcCHHHHHHHHHHHHHhcccchhhhhccCchHHHHHHHHHcCh
Confidence 4568889999999899999999999999998765321 2467999999999999988
No 39
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.02 E-value=4.2e-10 Score=80.44 Aligned_cols=58 Identities=17% Similarity=0.183 Sum_probs=49.1
Q ss_pred chHHHHHHHHHHhcCCC--ceeecCCCCHHHHHHHHHHhc----C--CCCCChhHHHHHHHHhhcc
Q 034296 8 LHTESGLKSLDQYLSGK--SYISGNQLTKDDIKVYAAVLV----K--PADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 8 ~~~~~~L~~Le~~L~~~--~yl~G~~~TiADi~l~~~l~~----~--~~~~~P~L~rW~~~m~s~~ 65 (99)
..+.+.++.||+.|+++ +|++|+++|+||++++..+.. . ++++||+|.+|+++|.++|
T Consensus 126 ~~~~~~l~~le~~L~~~~~~~l~Gd~~T~AD~~l~~~~~~~~~~~~~~l~~~P~l~~~~~r~~~~P 191 (205)
T PTZ00057 126 EELPKWSGYFENILKKNHCNYFVGDNLTYADLAVFNLYDDIETKYPNSLKNFPLLKAHNEFISNLP 191 (205)
T ss_pred HHHHHHHHHHHHHHHhCCCCeeeCCcccHHHHHHHHHHHHHHHhChhhhccChhHHHHHHHHHhCh
Confidence 34577889999999754 799999999999999977642 1 3678999999999999998
No 40
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.99 E-value=9.3e-10 Score=78.52 Aligned_cols=58 Identities=21% Similarity=0.410 Sum_probs=50.9
Q ss_pred chHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcCC-----CCCChhHHHHHHHHhhcc
Q 034296 8 LHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKP-----ADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 8 ~~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~~-----~~~~P~L~rW~~~m~s~~ 65 (99)
.++...+..+|..|++++|++|+++|+||+.++..+.... .+.+|+|.+|+++|.+++
T Consensus 134 ~~~~~~l~~le~~L~~~~~l~G~~~tiAD~~~~~~~~~~~~~~~~~~~~p~l~~w~~r~~~rp 196 (211)
T COG0625 134 AEIRALLALLEALLADGPYLAGDRFTIADIALAPLLWRLALLGEELADYPALKAWYERVLARP 196 (211)
T ss_pred HHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHhhhcCcccccChHHHHHHHHHHcCC
Confidence 3567889999999999999999999999999998887542 346999999999999887
No 41
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=98.98 E-value=4.9e-10 Score=74.44 Aligned_cols=57 Identities=18% Similarity=0.288 Sum_probs=47.5
Q ss_pred chHHHHHHHHHHhcC---CCceeecCCCCHHHHHHHHHHhc----------CCC-CCChhHHHHHHHHhhcc
Q 034296 8 LHTESGLKSLDQYLS---GKSYISGNQLTKDDIKVYAAVLV----------KPA-DSFPNASRWYDSVSSHI 65 (99)
Q Consensus 8 ~~~~~~L~~Le~~L~---~~~yl~G~~~TiADi~l~~~l~~----------~~~-~~~P~L~rW~~~m~s~~ 65 (99)
.+.++.++.||+.|+ +++|++| ++|+|||++++.+.. .++ +++|+|.+|+++|.++|
T Consensus 33 ~~~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~l~~~~~~~~~~~~~~~~~~~~~~~P~l~~W~~~~~~rp 103 (120)
T cd03203 33 AEAAAALDYIENALSKFDDGPFFLG-QFSLVDIAYVPFIERFQIFLSELFNYDITEGRPNLAAWIEEMNKIE 103 (120)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcCC-CccHHHHHHHHHHHHHHHHHHHhcCccccccCcHHHHHHHHHhcch
Confidence 355788899999997 4899999 999999999877631 133 58999999999999998
No 42
>PRK11752 putative S-transferase; Provisional
Probab=98.95 E-value=1.3e-09 Score=81.42 Aligned_cols=57 Identities=23% Similarity=0.419 Sum_probs=48.3
Q ss_pred hHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhc------------CCCCCChhHHHHHHHHhhcc
Q 034296 9 HTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLV------------KPADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 9 ~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~------------~~~~~~P~L~rW~~~m~s~~ 65 (99)
+..+.|+.||++|++++||+|+++|+|||+++..+.. .+.++||+|.+|+++|.++|
T Consensus 182 ~~~~~L~~le~~L~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~rv~~rP 250 (264)
T PRK11752 182 EAKRQLDVLDKQLAEHEYIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAKEIAERP 250 (264)
T ss_pred HHHHHHHHHHHHhccCCCCCCCccCHHHHHHHHHHHHHhhccccccccccCcccCHHHHHHHHHHHhCH
Confidence 3567889999999999999999999999999865421 12467999999999999998
No 43
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=98.93 E-value=1e-09 Score=70.07 Aligned_cols=54 Identities=22% Similarity=0.325 Sum_probs=45.5
Q ss_pred chHHHHHHHHHHhcCC--CceeecCCCCHHHHHHHHHHhcC------C-CCCChhHHHHHHHH
Q 034296 8 LHTESGLKSLDQYLSG--KSYISGNQLTKDDIKVYAAVLVK------P-ADSFPNASRWYDSV 61 (99)
Q Consensus 8 ~~~~~~L~~Le~~L~~--~~yl~G~~~TiADi~l~~~l~~~------~-~~~~P~L~rW~~~m 61 (99)
..+.+.++.||++|++ ++|+.|+++|+||+++++.+... . .+.||+|.+|+++|
T Consensus 42 ~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~ 104 (104)
T cd03192 42 EAIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVLDYLLYLDPKLLLKKYPKLKALRERV 104 (104)
T ss_pred HhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHHHHHHhhCchhhHHhChhHHHHHHhC
Confidence 3457888999999987 89999999999999999887532 2 46799999999985
No 44
>PLN02378 glutathione S-transferase DHAR1
Probab=98.92 E-value=1.8e-09 Score=77.81 Aligned_cols=64 Identities=16% Similarity=0.280 Sum_probs=51.0
Q ss_pred hHHHHHHHHHHhcC--CCceeecCCCCHHHHHHHHHHhcC----------C-CCCChhHHHHHHHHhhcc--CCCCCCC
Q 034296 9 HTESGLKSLDQYLS--GKSYISGNQLTKDDIKVYAAVLVK----------P-ADSFPNASRWYDSVSSHI--APSFPGK 72 (99)
Q Consensus 9 ~~~~~L~~Le~~L~--~~~yl~G~~~TiADi~l~~~l~~~----------~-~~~~P~L~rW~~~m~s~~--~~~~~~~ 72 (99)
...+.|..||++|+ +++|++|+++|+||+.++..+..+ + .++||+|.+|+++|.+++ ++.++.+
T Consensus 122 ~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~rpa~~~~~~~~ 200 (213)
T PLN02378 122 ALLVELEALENHLKSHDGPFIAGERVSAVDLSLAPKLYHLQVALGHFKSWSVPESFPHVHNYMKTLFSLDSFEKTKTEE 200 (213)
T ss_pred HHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHHHHHHHHHHHHHHhcCCCchhHhHHHHHHHHHHhcCCCeecccCCh
Confidence 44577899999997 578999999999999999875321 1 257999999999999999 4454444
No 45
>PRK10357 putative glutathione S-transferase; Provisional
Probab=98.89 E-value=3.2e-09 Score=75.01 Aligned_cols=56 Identities=14% Similarity=0.205 Sum_probs=48.0
Q ss_pred hHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC-----C---CCCChhHHHHHHHHhhcc
Q 034296 9 HTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK-----P---ADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 9 ~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~-----~---~~~~P~L~rW~~~m~s~~ 65 (99)
++.+.|+.||++|++++ ++|+++|+||+++++.+... + ..+||+|.+|+++|.+++
T Consensus 129 ~l~~~l~~le~~L~~~~-l~Gd~~t~ADi~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~i~~rp 192 (202)
T PRK10357 129 KINRSLDALEGYLVDGT-LKTDTVNLATIAIACAVGYLNFRRVAPGWCVDRPHLVKLVENLFQRE 192 (202)
T ss_pred HHHHHHHHHHHhhccCc-ccCCCcCHHHHHHHHHHHHHHhcccCcchhhcChHHHHHHHHHhcCh
Confidence 45678999999998888 99999999999999887521 1 357999999999999999
No 46
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.88 E-value=4.7e-09 Score=69.32 Aligned_cols=55 Identities=16% Similarity=0.151 Sum_probs=42.7
Q ss_pred HHHHHHHHHHhc---CCCceeecCCCCHHHHHHHHHHhcC---CCCCChhHHHHHHHHhhcc
Q 034296 10 TESGLKSLDQYL---SGKSYISGNQLTKDDIKVYAAVLVK---PADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 10 ~~~~L~~Le~~L---~~~~yl~G~~~TiADi~l~~~l~~~---~~~~~P~L~rW~~~m~s~~ 65 (99)
..+.++.+|..| ++++|++|+ +|+||++++..+... ..+..|+|.+|+++|.++|
T Consensus 46 ~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~~~~~~~~~P~l~~~~~rv~~rP 106 (114)
T cd03194 46 IARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVTRFRTYGLPLSPAAQAYVDALLAHP 106 (114)
T ss_pred HHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHCCH
Confidence 345566666655 477899999 999999999877532 3333499999999999988
No 47
>PLN02907 glutamate-tRNA ligase
Probab=98.86 E-value=4.7e-09 Score=88.51 Aligned_cols=57 Identities=25% Similarity=0.568 Sum_probs=49.1
Q ss_pred hHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC--------CCCCChhHHHHHHHHhhcc
Q 034296 9 HTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK--------PADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 9 ~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~--------~~~~~P~L~rW~~~m~s~~ 65 (99)
+.+..++.||++|++++||+|+++|+|||+++..+... ..++||||.||+++|.+++
T Consensus 94 ~l~~~L~~LE~~L~~rtYLvGd~lTLADIaL~~~L~~~~~~~~~~~~~~~yPnL~RW~erI~arP 158 (722)
T PLN02907 94 EFENACEYVDGYLASRTFLVGYSLTIADIAIWSGLAGSGQRWESLRKSKKYQNLVRWFNSISAEY 158 (722)
T ss_pred HHHHHHHHHHHHhccCCeecCCCCCHHHHHHHHHHHhhhhhhhcccccccCHHHHHHHHHHHhCC
Confidence 45678999999999999999999999999999876321 2468999999999999876
No 48
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.86 E-value=2.6e-09 Score=70.37 Aligned_cols=58 Identities=9% Similarity=0.059 Sum_probs=46.4
Q ss_pred HHHHHHHHHHhcC-CCceeecCCCCHHHHHHHHHHhcC---CCC-CChhHHHHHHHHhhcc-CCCC
Q 034296 10 TESGLKSLDQYLS-GKSYISGNQLTKDDIKVYAAVLVK---PAD-SFPNASRWYDSVSSHI-APSF 69 (99)
Q Consensus 10 ~~~~L~~Le~~L~-~~~yl~G~~~TiADi~l~~~l~~~---~~~-~~P~L~rW~~~m~s~~-~~~~ 69 (99)
..+.++.+|.+|+ +++||+| ++|+||++++..+... +++ . |+|.+|.++|.++| +..+
T Consensus 47 ~~~~~~~le~~l~~~~~~l~G-~fSiAD~~l~~~~~~~~~~g~~l~-p~l~ay~~r~~~rPa~~~~ 110 (114)
T cd03195 47 AEKLIAVAEALLPPGAANLFG-EWCIADTDLALMLNRLVLNGDPVP-ERLRDYARRQWQRPSVQAW 110 (114)
T ss_pred HHHHHHHHHHHHhcCCCcccC-CccHHHHHHHHHHHHHHHcCCCCC-HHHHHHHHHHHCCHHHHHH
Confidence 4677888999995 6589999 5999999999888653 222 3 99999999999999 4433
No 49
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.85 E-value=3.2e-09 Score=74.56 Aligned_cols=54 Identities=15% Similarity=0.290 Sum_probs=41.6
Q ss_pred HHHHHHHHHH----hcCCCceeecCCCCHHHHHHHHHHhcC-------CCCCChhHHHHHHHHhh
Q 034296 10 TESGLKSLDQ----YLSGKSYISGNQLTKDDIKVYAAVLVK-------PADSFPNASRWYDSVSS 63 (99)
Q Consensus 10 ~~~~L~~Le~----~L~~~~yl~G~~~TiADi~l~~~l~~~-------~~~~~P~L~rW~~~m~s 63 (99)
.+...+.+|+ ..++++|++|+++|||||.+|..+... ++.+||+|.+|+++|++
T Consensus 81 r~~L~~a~~~w~~~~~~~~~FlaGd~ptIADisvyg~l~s~e~~~~~~Dl~~~p~I~~W~eRm~~ 145 (149)
T cd03197 81 REWLYDALNTWVAALGKDRQFHGGSKPNLADLAVYGVLRSVEGHPAFKDMVEETKIGEWYERMDA 145 (149)
T ss_pred HHHHHHHHHHHHHHhcCCCCccCCCCCCHHHHHHHHHHHHHHHhccccchhhCcCHHHHHHHHHH
Confidence 3444444443 334678999999999999999998632 56689999999999986
No 50
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=98.83 E-value=4.7e-09 Score=78.10 Aligned_cols=63 Identities=21% Similarity=0.414 Sum_probs=52.3
Q ss_pred HHHHHHHHHHhcC------------------CCceeecCCCCHHHHHHHHHHhcC----------C-CCCChhHHHHHHH
Q 034296 10 TESGLKSLDQYLS------------------GKSYISGNQLTKDDIKVYAAVLVK----------P-ADSFPNASRWYDS 60 (99)
Q Consensus 10 ~~~~L~~Le~~L~------------------~~~yl~G~~~TiADi~l~~~l~~~----------~-~~~~P~L~rW~~~ 60 (99)
+.+.++.||++|. +++|+.|+++|+||++++..+..+ + .++||+|.+|+++
T Consensus 128 l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd~~tlaD~~l~p~l~~l~~~~~~~~~~~i~~~~p~l~~w~~~ 207 (236)
T TIGR00862 128 LLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFDIPAEFTGVWRYLSN 207 (236)
T ss_pred HHHHHHHHHHHHhccccccccccccccccccCCCcccCCccchhhHHHHHHHHHHHHHHHHHhCcCccccCchHHHHHHH
Confidence 6788999999996 579999999999999999887422 3 5789999999999
Q ss_pred Hhhcc--CCCCCCC
Q 034296 61 VSSHI--APSFPGK 72 (99)
Q Consensus 61 m~s~~--~~~~~~~ 72 (99)
|.+++ ...+|.+
T Consensus 208 ~~~~~sf~~t~p~~ 221 (236)
T TIGR00862 208 AYAREEFTNTCPDD 221 (236)
T ss_pred HhccchHHhhCCCh
Confidence 99998 4445544
No 51
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=98.78 E-value=1.3e-08 Score=73.23 Aligned_cols=56 Identities=23% Similarity=0.484 Sum_probs=47.1
Q ss_pred hHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcCC---CCCCh-hHHHHHHHHhhcc
Q 034296 9 HTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKP---ADSFP-NASRWYDSVSSHI 65 (99)
Q Consensus 9 ~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~~---~~~~P-~L~rW~~~m~s~~ 65 (99)
.+++.|+.||++|++++|+.| ++|+||+.++..+.... .-.+| ||.+|++||++++
T Consensus 145 ~~~~~l~~le~~L~~~~~l~g-~~TiADi~l~~~l~~~~~~~~~~~p~~l~~w~~Ri~ar~ 204 (209)
T TIGR02182 145 EINADLEELDKLIDGPNAVNG-ELSEDDILVFPLLRNLTLVAGINWPSRVADYLDNMSKKS 204 (209)
T ss_pred HHHHHHHHHHHHHhCccccCC-CCCHHHHHHHHHhcCeeeecCCCCChHHHHHHHHHHHHh
Confidence 457789999999999999955 69999999999987653 12477 9999999999876
No 52
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.77 E-value=8.2e-09 Score=65.83 Aligned_cols=51 Identities=24% Similarity=0.322 Sum_probs=42.6
Q ss_pred chHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC-------C-CCCChhHHHHHHHH
Q 034296 8 LHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK-------P-ADSFPNASRWYDSV 61 (99)
Q Consensus 8 ~~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~-------~-~~~~P~L~rW~~~m 61 (99)
.++++.|..||++|++++| +++|+|||.+++.+... + .++||||.+|+++|
T Consensus 40 ~~~~~~l~~le~~L~~~~~---d~~TlADi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~rm 98 (98)
T cd03205 40 GKIERALDALEAELAKLPL---DPLDLADIAVACALGYLDFRHPDLDWRAAHPALAAWYARF 98 (98)
T ss_pred HHHHHHHHHHHHhhhhCCC---CCCCHHHHHHHHHHHHHHhHccCcchhhhChHHHHHHHhC
Confidence 3567789999999999998 89999999999887422 2 46899999999986
No 53
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.77 E-value=9.1e-09 Score=69.44 Aligned_cols=54 Identities=19% Similarity=0.330 Sum_probs=45.1
Q ss_pred hHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhc---C-----C----CCCChhHHHHHHHHh
Q 034296 9 HTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLV---K-----P----ADSFPNASRWYDSVS 62 (99)
Q Consensus 9 ~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~---~-----~----~~~~P~L~rW~~~m~ 62 (99)
...+.++.|++.|++++|++|++||.+|+.+|..+.. . . .++||||.+|.+||.
T Consensus 61 ~~~~~l~aLs~~Lg~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~~~~~~~pnL~~y~~Ri~ 126 (126)
T cd03211 61 EVDQCCQALSQRLGTQPYFFGDQPTELDALVFGHLFTILTTQLPNDELAEKVKKYSNLLAFCRRIE 126 (126)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHhcC
Confidence 3467889999999999999999999999999977532 1 1 457999999999983
No 54
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.76 E-value=1.5e-08 Score=74.39 Aligned_cols=58 Identities=22% Similarity=0.561 Sum_probs=51.3
Q ss_pred chHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC--------CCCCChhHHHHHHHHhhcc
Q 034296 8 LHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK--------PADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 8 ~~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~--------~~~~~P~L~rW~~~m~s~~ 65 (99)
.++.+.+..+|.+|.++.|++|+++|+||+.+...+... +.+++|++.||+++++++|
T Consensus 136 ~~~~~~~~~~e~~l~~~~yl~g~~~tlADl~~~~~~~~~~~~~~~~~~~~~~p~v~~W~~~~~~~P 201 (226)
T KOG0867|consen 136 AKLRKALDNLERFLKTQVYLAGDQLTLADLSLASTLSQFQGKFATEKDFEKYPKVARWYERIQKRP 201 (226)
T ss_pred HHHHHHHHHHHHHHccCCcccCCcccHHHHHHhhHHHHHhHhhhhhhhhhhChHHHHHHHHHHhCc
Confidence 456788999999999999999999999999999887653 3468999999999999976
No 55
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=98.75 E-value=1.1e-08 Score=76.98 Aligned_cols=56 Identities=20% Similarity=0.371 Sum_probs=47.2
Q ss_pred HHHHHHHHHHhcCC-CceeecCCCCHHHHHHHHHHhcC----------C-CCCChhHHHHHHHHhhcc
Q 034296 10 TESGLKSLDQYLSG-KSYISGNQLTKDDIKVYAAVLVK----------P-ADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 10 ~~~~L~~Le~~L~~-~~yl~G~~~TiADi~l~~~l~~~----------~-~~~~P~L~rW~~~m~s~~ 65 (99)
+.+.+..||++|++ ++|++|+++|+||++++..+... + .++||+|.+|+++|.+++
T Consensus 176 l~~~l~~LE~~L~~~g~yl~Gd~~SlADi~l~p~L~~l~~~~~~~~~~~i~~~~P~L~~w~~ri~~rp 243 (265)
T PLN02817 176 LLDELTSFDDYIKENGPFINGEKISAADLSLGPKLYHLEIALGHYKNWSVPDSLPFVKSYMKNIFSME 243 (265)
T ss_pred HHHHHHHHHHHHhcCCCeeCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHhcch
Confidence 46778899999974 68999999999999999876321 2 367999999999999998
No 56
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.73 E-value=1.5e-08 Score=69.41 Aligned_cols=56 Identities=25% Similarity=0.337 Sum_probs=46.4
Q ss_pred hHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhc-----CC-------CCCChhHHHHHHHHhhc
Q 034296 9 HTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLV-----KP-------ADSFPNASRWYDSVSSH 64 (99)
Q Consensus 9 ~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~-----~~-------~~~~P~L~rW~~~m~s~ 64 (99)
+..+.++.||+.|++++|++|+++|.+|+.++..+.. .+ +.++|||.+|.+||.+.
T Consensus 68 ~a~~~l~~l~~~L~~~~~~~Gd~~t~~D~~~~~~l~~~~~~~~~~~~l~~~~~~~pnL~~~~~ri~~~ 135 (137)
T cd03212 68 DAKECLNLLSQRLGESQFFFGDTPTSLDALVFGYLAPLLKAPLPNNKLQNHLKQCPNLCRFCDRILSL 135 (137)
T ss_pred HHHHHHHHHHHHHCCCCcCCCCCCcHHHHHHHHHHHHHHhccCCChHHHHHHHHCcHHHHHHHHHHHh
Confidence 3456788999999999999999999999999877532 22 46899999999999863
No 57
>PRK15113 glutathione S-transferase; Provisional
Probab=98.46 E-value=4.2e-07 Score=65.23 Aligned_cols=56 Identities=7% Similarity=-0.013 Sum_probs=44.8
Q ss_pred hHHHHHHHHHHhcCC-CceeecCCCCHHHHHHHHHHhcC---CCCCChhHHHHHHHHhhcc
Q 034296 9 HTESGLKSLDQYLSG-KSYISGNQLTKDDIKVYAAVLVK---PADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 9 ~~~~~L~~Le~~L~~-~~yl~G~~~TiADi~l~~~l~~~---~~~~~P~L~rW~~~m~s~~ 65 (99)
+..+.+..||++|++ ..|++|+ +|+||++++..+... ...-.|+|.+|+++|.++|
T Consensus 141 ~~~~~l~~le~~L~~~~~~l~G~-~TlADi~l~~~l~~~~~~~~~~~p~l~~~~~r~~~rp 200 (214)
T PRK15113 141 AAEKLFAVAERLLAPGQPNLFGE-WCIADTDLALMLNRLVLHGDEVPERLADYATFQWQRA 200 (214)
T ss_pred HHHHHHHHHHHHHhcCCCEeeCC-ccHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCH
Confidence 346788899999975 4799996 999999999887543 2222399999999999998
No 58
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.11 E-value=5e-06 Score=62.13 Aligned_cols=57 Identities=19% Similarity=0.332 Sum_probs=48.7
Q ss_pred hHHHHHHHHHHhcC-CCceeecCCCCHHHHHHHHHHhcC-------------CCCCChhHHHHHHHHhhcc
Q 034296 9 HTESGLKSLDQYLS-GKSYISGNQLTKDDIKVYAAVLVK-------------PADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 9 ~~~~~L~~Le~~L~-~~~yl~G~~~TiADi~l~~~l~~~-------------~~~~~P~L~rW~~~m~s~~ 65 (99)
+..+.|+.||+.|. +++|+.|++++..|+.++..+... +.+++|.|.+|.++|.+++
T Consensus 133 e~~e~l~~lE~el~k~k~~fgG~~~G~vDi~~~p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~~~~ 203 (231)
T KOG0406|consen 133 ELREALKVLEEELGKGKDFFGGETIGFVDIAIGPSFERWLAVLEKFGGVKFIIEEETPKLIKWIKRMKEDE 203 (231)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCCcCHhhhhHHhhHHHHHHHHHHhcCcccCCCCCCccHHHHHHHHhcCh
Confidence 36778999999998 899999999999999999655421 2468999999999999988
No 59
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=98.09 E-value=3.9e-06 Score=64.22 Aligned_cols=59 Identities=15% Similarity=0.223 Sum_probs=48.5
Q ss_pred HHHHHHHHHHhcCC----CceeecCCCCHHHHHHHHHHhcC---C-----C--CCChhHHHHHHHHhhcc-CCC
Q 034296 10 TESGLKSLDQYLSG----KSYISGNQLTKDDIKVYAAVLVK---P-----A--DSFPNASRWYDSVSSHI-APS 68 (99)
Q Consensus 10 ~~~~L~~Le~~L~~----~~yl~G~~~TiADi~l~~~l~~~---~-----~--~~~P~L~rW~~~m~s~~-~~~ 68 (99)
+...|.++|..|.. .+||+|+.||+||+++...++.. + + .+.|||..|+.+++.|+ |..
T Consensus 210 l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~Lg~e~~yw~~gsrpnle~Yf~rvrrR~sf~k 283 (325)
T KOG4420|consen 210 LAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFLGLEKKYWEDGSRPNLESYFERVRRRFSFRK 283 (325)
T ss_pred HHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHHHHcccHHHhcccCCCccHHHHHHHHHhhhHHHH
Confidence 45667778888887 78999999999999999998753 2 2 37899999999999998 443
No 60
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.02 E-value=5.5e-06 Score=63.74 Aligned_cols=55 Identities=25% Similarity=0.463 Sum_probs=47.4
Q ss_pred HHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC-------------CCCCChhHHHHHHHHhhcc
Q 034296 11 ESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK-------------PADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 11 ~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~-------------~~~~~P~L~rW~~~m~s~~ 65 (99)
=..|+.||..|+++.||+|+++|-||+-+|..+... .+.+||||..|+..+=+.|
T Consensus 211 F~~Ld~lE~~L~~~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~rI~dypnL~~yLr~LYq~p 278 (324)
T COG0435 211 FEALDKLEQILSERRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCNLRRIRDYPNLWGYLRDLYQLP 278 (324)
T ss_pred HHHHHHHHHHhhcCeeeccccchHhhhhhhheeEeecceEEeeeecccchhhcCchHHHHHHHHhcCc
Confidence 357888999999999999999999999999998653 2467999999999887766
No 61
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=97.94 E-value=6.4e-06 Score=62.74 Aligned_cols=55 Identities=20% Similarity=0.488 Sum_probs=47.9
Q ss_pred HHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC---------C-C-CCChhHHHHHHHHhhc
Q 034296 10 TESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK---------P-A-DSFPNASRWYDSVSSH 64 (99)
Q Consensus 10 ~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~---------~-~-~~~P~L~rW~~~m~s~ 64 (99)
.++.|+.+++.|++++||+|+++|-+|+.+|.++.++ + + .++|||..|.+||+..
T Consensus 208 l~rDlr~i~~~Lg~KkflfGdkit~~DatvFgqLa~v~YP~~~~i~d~le~d~p~l~eYceRIr~~ 273 (281)
T KOG4244|consen 208 LHRDLRAISDYLGDKKFLFGDKITPADATVFGQLAQVYYPFRSHISDLLEGDFPNLLEYCERIRKE 273 (281)
T ss_pred HHHHHHHHHHHhCCCccccCCCCCcceeeehhhhhheeccCCCcHHHHHhhhchHHHHHHHHHHHH
Confidence 3678888999999999999999999999999998754 1 2 4899999999999874
No 62
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=97.81 E-value=1.6e-05 Score=59.33 Aligned_cols=64 Identities=42% Similarity=0.789 Sum_probs=58.6
Q ss_pred ccccccchHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcCC-CCCChhHHHHHHHHhhcc
Q 034296 2 AITFSDLHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKP-ADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 2 ~~~~~~~~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~~-~~~~P~L~rW~~~m~s~~ 65 (99)
.|.|.+......++.+|.+|.+++|+.|..++.+|+.+|..+..-+ -..++|..+||+++.++.
T Consensus 1 ~m~ftdl~~~~glk~l~~sLA~ks~~~g~~~s~edv~vf~al~~ep~s~~~v~~~~w~~~l~a~~ 65 (231)
T KOG1668|consen 1 PMAFTDLKSPAGLKKLNKSLAEKSYIEGYQLSKEDVVVFAALGVEPQSARLVNAERWYSKLEALL 65 (231)
T ss_pred CCcccccCchhhhhhhhHhhhcccCCCCCCcccccceeehhcccCcchhhhhHHHHHHHHHHHHH
Confidence 4889999999999999999999999999999999999999997665 357999999999999877
No 63
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.81 E-value=4.9e-05 Score=55.89 Aligned_cols=59 Identities=22% Similarity=0.272 Sum_probs=49.6
Q ss_pred cchHHHHHHHHHHhcC--CCceeecCCCCHHHHHHHHHHhcC----C---CCCChhHHHHHHHHhhcc
Q 034296 7 DLHTESGLKSLDQYLS--GKSYISGNQLTKDDIKVYAAVLVK----P---ADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 7 ~~~~~~~L~~Le~~L~--~~~yl~G~~~TiADi~l~~~l~~~----~---~~~~P~L~rW~~~m~s~~ 65 (99)
-+...+.++.+++.|+ ++.||+||++|.||+.++..+... + .+.+|+|.++.++|.++|
T Consensus 125 ~Pa~~~~~~~~~~~L~~~~sgflvGd~lT~aDl~i~e~l~~l~~~~~~~~~~~~P~L~a~~~kv~~~p 192 (206)
T KOG1695|consen 125 LPAKPKYFKILEKILKKNKSGFLVGDKLTWADLVIAEHLDTLEELLDPSALDHFPKLKAFKERVSSIP 192 (206)
T ss_pred ccchHHHHHHHHHHHHhCCCCeeecCcccHHHHHHHHHHHHHHHhcCchhhccChHHHHHHHHHhcCc
Confidence 3456788999999997 567999999999999999887532 2 356899999999999988
No 64
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.75 E-value=2.5e-05 Score=57.03 Aligned_cols=57 Identities=18% Similarity=0.344 Sum_probs=50.2
Q ss_pred hHHHHHHHHHHhcCC--CceeecCCCCHHHHHHHHHHhcC-----CCCCChhHHHHHHHHhhcc
Q 034296 9 HTESGLKSLDQYLSG--KSYISGNQLTKDDIKVYAAVLVK-----PADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 9 ~~~~~L~~Le~~L~~--~~yl~G~~~TiADi~l~~~l~~~-----~~~~~P~L~rW~~~m~s~~ 65 (99)
.+.+++..||+.|.. ..|-+||++|+||+++...++.+ +++.||-|.|-.+.+.+.+
T Consensus 136 ~ItkGF~ALEklL~~~aGkycvGDevtiADl~L~pqv~nA~rf~vdl~PYPti~ri~e~l~elp 199 (217)
T KOG0868|consen 136 FITKGFTALEKLLKSHAGKYCVGDEVTIADLCLPPQVYNANRFHVDLTPYPTITRINEELAELP 199 (217)
T ss_pred HHHHhHHHHHHHHHHccCCcccCceeehhhhccchhhhhhhhccccCCcCchHHHHHHHHHhCH
Confidence 356788999998864 57999999999999999999754 6889999999999999988
No 65
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.71 E-value=1.5e-05 Score=60.99 Aligned_cols=53 Identities=23% Similarity=0.543 Sum_probs=43.7
Q ss_pred HHHHHHHHHhcCCCc--eeecCCCCHHHHHHHHHHhcC-------------C-CCCChhHHHHHHHHhh
Q 034296 11 ESGLKSLDQYLSGKS--YISGNQLTKDDIKVYAAVLVK-------------P-ADSFPNASRWYDSVSS 63 (99)
Q Consensus 11 ~~~L~~Le~~L~~~~--yl~G~~~TiADi~l~~~l~~~-------------~-~~~~P~L~rW~~~m~s 63 (99)
=+.|+.+|+.|+++. |+.|+++|-|||.+|..+-.. . .++||+|..|++.+=.
T Consensus 209 fe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~ir~~Yp~l~~~lk~iY~ 277 (319)
T KOG2903|consen 209 FEALDRCEDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTIRDEYPNLHNWLKNIYW 277 (319)
T ss_pred HHHHHHHHHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecchhhhhccCcHHHHHHHHHHh
Confidence 356778889999877 999999999999999887542 1 3589999999998855
No 66
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=97.46 E-value=8.9e-05 Score=54.93 Aligned_cols=56 Identities=20% Similarity=0.338 Sum_probs=46.6
Q ss_pred HHHHHHHHHHhcCC---CceeecCCCCHHHHHHHHHHhcC----------C-CCCChhHHHHHHHHhhcc
Q 034296 10 TESGLKSLDQYLSG---KSYISGNQLTKDDIKVYAAVLVK----------P-ADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 10 ~~~~L~~Le~~L~~---~~yl~G~~~TiADi~l~~~l~~~----------~-~~~~P~L~rW~~~m~s~~ 65 (99)
+-+.|+.||++|+. ++||.||++|.||+.+..-++.+ + .+++++|.||++++=++.
T Consensus 128 Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLlPKL~~i~va~k~yk~~~IP~~lt~V~rYl~~~ya~d 197 (221)
T KOG1422|consen 128 LLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLLPKLHHIKVAAKHYKNFEIPASLTGVWRYLKNAYARD 197 (221)
T ss_pred HHHHHHHHHHHhcCccCCccccCCeeeeehhhhchhHHHHHHHHHHhcCCCCchhhhHHHHHHHHHHhHH
Confidence 45667899999985 78999999999999999777632 2 468999999999998776
No 67
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=96.90 E-value=0.0011 Score=49.59 Aligned_cols=56 Identities=16% Similarity=0.306 Sum_probs=47.4
Q ss_pred HHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC------------CCCCChhHHHHHHHHhhcc
Q 034296 10 TESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK------------PADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 10 ~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~------------~~~~~P~L~rW~~~m~s~~ 65 (99)
..+..+.|...|+.++|+.|++||-.|..+|..++.. .+++|+||.++-.||.+.-
T Consensus 182 vdkc~~aLsa~L~~q~yf~g~~P~elDAlvFGHlytilTt~Lpn~ela~~lkkys~LlefcrrIeq~y 249 (257)
T KOG3027|consen 182 VDKCCRALSAQLGSQPYFTGDQPTELDALVFGHLYTILTTRLPNMELANILKKYSNLLEFCRRIEQQY 249 (257)
T ss_pred HHHHHHHHHHHhcCCCccCCCCccHHHHHHHhhhHHhhhhcCCcHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 3556778899999999999999999999999988743 1468999999999998765
No 68
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=96.88 E-value=0.0022 Score=44.25 Aligned_cols=57 Identities=19% Similarity=0.335 Sum_probs=41.8
Q ss_pred chHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcCC----CCCChhHHHHHHHHhhcc
Q 034296 8 LHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKP----ADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 8 ~~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~~----~~~~P~L~rW~~~m~s~~ 65 (99)
.+++..|+.||..|.......| ++|+-||.+|..++... +.=.|+|..|+++|.+..
T Consensus 62 ~~l~~~L~~Le~ll~~~~~~n~-~LS~dDi~lFp~LR~Ltivkgi~~P~~V~~Y~~~~s~~t 122 (132)
T PF04399_consen 62 AELNADLEELEPLLASPNAVNG-ELSIDDIILFPILRSLTIVKGIQWPPKVRAYMDRMSKAT 122 (132)
T ss_dssp HHHHHHHHHHHHH-SCTTBTTS-S--HHHHHHHHHHHHHCTCTTS---HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCC-CCCHHHHHHHHHHhhhhhccCCcCCHHHHHHHHHHHHHc
Confidence 3567788889988887767666 99999999999998652 333468999999998765
No 69
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=96.47 E-value=0.011 Score=40.62 Aligned_cols=56 Identities=18% Similarity=0.241 Sum_probs=42.4
Q ss_pred hHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcCC----CCCChhHHHHHHHHhhcc
Q 034296 9 HTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKP----ADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 9 ~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~~----~~~~P~L~rW~~~m~s~~ 65 (99)
+++..|+.|+..|.+.+.+ +..+|+-||.+|..++... +.=.|+|.+|+++|.+.+
T Consensus 64 ~l~~~L~~l~~ll~~~~~~-n~~ls~DDi~lFp~LR~Lt~vkgi~~P~~V~~Y~~~~s~~t 123 (128)
T cd03199 64 ALNALLEELDPLILSSEAV-NGQLSTDDIILFPILRNLTLVKGLVFPPKVKAYLERMSALT 123 (128)
T ss_pred HHHHHHHHHHHHHcCcccc-CCcCCHHHHHHHHHHhhhhhhcCCCCCHHHHHHHHHHHHHh
Confidence 4566778888887554444 5589999999999998752 333368999999998864
No 70
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=96.33 E-value=0.0024 Score=53.31 Aligned_cols=51 Identities=29% Similarity=0.661 Sum_probs=43.5
Q ss_pred hHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC-------C-CCCChhHHHHHH
Q 034296 9 HTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK-------P-ADSFPNASRWYD 59 (99)
Q Consensus 9 ~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~-------~-~~~~P~L~rW~~ 59 (99)
++...+..|+.+|.-++||+|+.+|+||++++.++..- . ...+-+|.|||+
T Consensus 92 ~~s~~~~~ld~~l~~~t~lvg~sls~Ad~aiw~~l~~n~~~~~~lk~~k~~~~v~Rw~~ 150 (712)
T KOG1147|consen 92 EISSSLSELDKFLVLRTFLVGNSLSIADFAIWGALHSNGMRQEQLKAKKDYQNVERWYD 150 (712)
T ss_pred HHHHHHHHHHhhhhHHHHhhccchhHHHHHHHHHHhcccchHHHHHhhCCchhhhhhcC
Confidence 45678889999999999999999999999999999753 1 235779999998
No 71
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=96.19 E-value=0.0057 Score=47.66 Aligned_cols=56 Identities=16% Similarity=0.318 Sum_probs=41.7
Q ss_pred hHHHHHHHHHH---hc-CCCceeecCCCCHHHHHHHHHHhcC-------CCCCChhHHHHHHHHhhc
Q 034296 9 HTESGLKSLDQ---YL-SGKSYISGNQLTKDDIKVYAAVLVK-------PADSFPNASRWYDSVSSH 64 (99)
Q Consensus 9 ~~~~~L~~Le~---~L-~~~~yl~G~~~TiADi~l~~~l~~~-------~~~~~P~L~rW~~~m~s~ 64 (99)
..+...+..|+ .| .+++|+.|++|++||+.+|..+..+ +.-.-.+|..||.+|+..
T Consensus 289 ~Re~lydA~d~Wvaalgknr~flGG~kPnLaDLsvfGvl~sm~gc~afkd~~q~t~I~eW~~rmeal 355 (370)
T KOG3029|consen 289 EREHLYDAADQWVAALGKNRPFLGGKKPNLADLSVFGVLRSMEGCQAFKDCLQNTSIGEWYYRMEAL 355 (370)
T ss_pred HHHHHHHHHHHHHHHhCCCCCccCCCCCchhhhhhhhhhhHhhhhhHHHHHHhcchHHHHHHHHHHH
Confidence 34445555553 44 5799999999999999999999865 122346899999999864
No 72
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.09 E-value=0.016 Score=45.21 Aligned_cols=56 Identities=18% Similarity=0.310 Sum_probs=47.2
Q ss_pred HHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcC-----C-------CCCChhHHHHHHHHhhcc
Q 034296 10 TESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVK-----P-------ADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 10 ~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~-----~-------~~~~P~L~rW~~~m~s~~ 65 (99)
..+.++.|.+.|+++.|+.||++|--|+.+|..+... + +..++||.|+.+++.+.-
T Consensus 168 Aska~~~LS~~Lgs~kffFgd~psslDa~lfs~la~~~~~~Lp~~~Lq~~l~~~~NL~~~~~~i~s~~ 235 (313)
T KOG3028|consen 168 ASKALNLLSTLLGSKKFFFGDKPSSLDALLFSYLAILLQVALPNDSLQVHLLAHKNLVRYVERIRSLY 235 (313)
T ss_pred HHHHHHHHHHHhcCceEeeCCCCchHHHHHHHHHHHHHhccCCchhHHHHHHhcchHHHHHHHHHHHH
Confidence 3567888999999999999999999999999887641 1 234899999999999866
No 73
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=94.68 E-value=0.078 Score=36.01 Aligned_cols=55 Identities=5% Similarity=-0.005 Sum_probs=35.1
Q ss_pred HHHHHHHHHHhcCC-CceeecCCCCHHHHHHHHHHhcC---CCCCChhHHHHHHHHhhcc
Q 034296 10 TESGLKSLDQYLSG-KSYISGNQLTKDDIKVYAAVLVK---PADSFPNASRWYDSVSSHI 65 (99)
Q Consensus 10 ~~~~L~~Le~~L~~-~~yl~G~~~TiADi~l~~~l~~~---~~~~~P~L~rW~~~m~s~~ 65 (99)
.++.+...+..|.+ ++||+| +.||||..+..++..+ ..+-.+++..|.++.-++|
T Consensus 48 a~kL~~~a~~ll~~g~~~LFG-ewsIAD~dlA~ml~Rl~~~gd~vP~~l~~Ya~~qwqrp 106 (117)
T PF14834_consen 48 AQKLIAVAERLLADGGPNLFG-EWSIADADLALMLNRLVTYGDPVPERLADYAERQWQRP 106 (117)
T ss_dssp HHHHHHHHHHHTTT--SSTTS-S--HHHHHHHHHHHHHHTTT----HHHHHHHHHHHT-H
T ss_pred HHHHHHHHHHHhccCCCCccc-cchHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHCCH
Confidence 46667777877764 789999 7999999999998754 1122346777777666554
No 74
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=93.95 E-value=0.096 Score=37.16 Aligned_cols=49 Identities=16% Similarity=0.178 Sum_probs=37.7
Q ss_pred HHHHHHHHHHhcCCC---ceeecCC-CCHHHHHHHHHHhcCCCCCCh--hHHHHH
Q 034296 10 TESGLKSLDQYLSGK---SYISGNQ-LTKDDIKVYAAVLVKPADSFP--NASRWY 58 (99)
Q Consensus 10 ~~~~L~~Le~~L~~~---~yl~G~~-~TiADi~l~~~l~~~~~~~~P--~L~rW~ 58 (99)
..+.+..|++.|++. .|+.|+. +|-.|+.++..+...-..+.| .|..|+
T Consensus 113 a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~l~p~LP~~~l~~~L 167 (168)
T PF11801_consen 113 AMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLALLLVPELPDPFLRDHL 167 (168)
T ss_pred HHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhcccCCcHHHHHHh
Confidence 466788889999988 9999987 999999999998765333343 455543
No 75
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=79.25 E-value=6.1 Score=29.18 Aligned_cols=57 Identities=23% Similarity=0.433 Sum_probs=43.6
Q ss_pred chHHHHHHHHHHhcCCCceeecCCCCHHHHHHHHHHhcCCC--C-CCh-hHHHHHHHHhhcc
Q 034296 8 LHTESGLKSLDQYLSGKSYISGNQLTKDDIKVYAAVLVKPA--D-SFP-NASRWYDSVSSHI 65 (99)
Q Consensus 8 ~~~~~~L~~Le~~L~~~~yl~G~~~TiADi~l~~~l~~~~~--~-~~P-~L~rW~~~m~s~~ 65 (99)
.+++..|+.|+..+.+.+ -....+|+-||.+|..+..... . ++| .+..|.++|.+.+
T Consensus 145 ~~i~~dl~~l~~Li~~~s-~~n~~l~~ddi~vFplLRnlt~v~gi~wps~v~dy~~~msekt 205 (215)
T COG2999 145 KRIQADLRALDKLIVGPS-AVNGELSEDDILVFPLLRNLTLVAGIQWPSRVADYRDNMSEKT 205 (215)
T ss_pred HHHHHHHHHHHHHhcCcc-hhccccchhhhhhhHHhccceecccCCCcHHHHHHHHHHHHhh
Confidence 356778888888887766 3334899999999999987631 1 455 7999999998866
No 76
>PHA03308 transcriptional regulator ICP4; Provisional
Probab=29.78 E-value=19 Score=32.04 Aligned_cols=9 Identities=56% Similarity=2.114 Sum_probs=6.8
Q ss_pred cCCccceec
Q 034296 90 AKPVCCCWR 98 (99)
Q Consensus 90 ~~~~~~~~~ 98 (99)
-.|.||||.
T Consensus 1415 rspmcccws 1423 (1463)
T PHA03308 1415 RSPMCCCWS 1423 (1463)
T ss_pred CCceeeecc
Confidence 457899994
No 77
>COG2442 Uncharacterized conserved protein [Function unknown]
Probab=25.81 E-value=34 Score=21.46 Aligned_cols=35 Identities=23% Similarity=0.249 Sum_probs=24.9
Q ss_pred hcCCCceeecCCCCHHHHHHHHHHhcCC---CCCChhH
Q 034296 20 YLSGKSYISGNQLTKDDIKVYAAVLVKP---ADSFPNA 54 (99)
Q Consensus 20 ~L~~~~yl~G~~~TiADi~l~~~l~~~~---~~~~P~L 54 (99)
..++++-+.|.+++.-||.-.-.....+ ++.||.|
T Consensus 19 i~gGkP~I~GtRI~V~~Il~~l~~G~s~eeil~dyp~L 56 (79)
T COG2442 19 ICGGKPCIRGTRIPVWDILEMLAAGESIEEILADYPDL 56 (79)
T ss_pred ccCCcceEeCceecHHHHHHHHHCCCCHHHHHHhCCCC
Confidence 4468999999999999998776644321 3567743
No 78
>PF14786 Death_2: Tube Death domain; PDB: 1D2Z_B.
Probab=25.39 E-value=1.5e+02 Score=20.65 Aligned_cols=38 Identities=16% Similarity=0.184 Sum_probs=17.6
Q ss_pred CChhHHHHHHHHhhcc---------CCCCCCCCccccccCCCCchhh
Q 034296 50 SFPNASRWYDSVSSHI---------APSFPGKAVGVRVDGKGAPVDA 87 (99)
Q Consensus 50 ~~P~L~rW~~~m~s~~---------~~~~~~~~~~~~~~~~~~~~~~ 87 (99)
+.|.|.-.++-+..-. .+-+.+++..+-..||++|||-
T Consensus 90 eRPTl~~Ll~LLvkael~rAADyva~~~Lke~~p~RP~~GPaA~i~~ 136 (137)
T PF14786_consen 90 ERPTLGHLLQLLVKAELFRAADYVAVDILKEEPPARPDDGPAAPIDL 136 (137)
T ss_dssp TS-BHHHHHHHHHHTT-HHHHHHHHHHTT--------SSSTTS---B
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCC
Confidence 4788777777665433 2455566666699999999983
No 79
>PF00392 GntR: Bacterial regulatory proteins, gntR family; InterPro: IPR000524 Many bacterial transcription regulation proteins bind DNA through a helix-turn-helix (HTH) motif, which can be classified into subfamilies on the basis of sequence similarities. The HTH GntR family has many members distributed among diverse bacterial groups that regulate various biological processes. It was named GntR after the Bacillus subtilis repressor of the gluconate operon []. Family members include GntR, HutC, KorA, NtaR, FadR, ExuR, FarR, DgoR and PhnF. The crystal structure of the FadR protein has been determined []. In general, these proteins contain a DNA-binding HTH domain at the N terminus, and an effector-binding or oligomerisation domain at the C terminus (IPR011711 from INTERPRO). The DNA-binding domain is well conserved in structure for the whole of the GntR family, consisting of a 3-helical bundle core with a small beta-sheet (wing); the GntR winged helix structure is similar to that found in several other transcriptional regulator families. The regions outside the DNA-binding domain are more variable and are consequently used to define GntR subfamilies []. This entry represents the N-terminal DNA-binding domain of the GntR family.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 1HW1_B 1H9T_A 1HW2_A 1H9G_A 1E2X_A 3IHU_A 3C7J_A 2RA5_A 3BY6_C 3IC7_A ....
Probab=23.02 E-value=71 Score=18.27 Aligned_cols=48 Identities=13% Similarity=0.117 Sum_probs=31.4
Q ss_pred HHHHHHHHHhcCCCceeecCCC-CHHHHHHHHHHhcCCCCCChhHHHHHHHHhhc
Q 034296 11 ESGLKSLDQYLSGKSYISGNQL-TKDDIKVYAAVLVKPADSFPNASRWYDSVSSH 64 (99)
Q Consensus 11 ~~~L~~Le~~L~~~~yl~G~~~-TiADi~l~~~l~~~~~~~~P~L~rW~~~m~s~ 64 (99)
+...+.|.+.+....|-.|+++ |..+++--..+. .+.+.+=++.+.+.
T Consensus 3 ~~i~~~l~~~I~~g~~~~g~~lps~~~la~~~~vs------r~tvr~al~~L~~~ 51 (64)
T PF00392_consen 3 EQIYDQLRQAILSGRLPPGDRLPSERELAERYGVS------RTTVREALRRLEAE 51 (64)
T ss_dssp HHHHHHHHHHHHTTSS-TTSBE--HHHHHHHHTS-------HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCCCCCEeCCHHHHHHHhccC------CcHHHHHHHHHHHC
Confidence 4556778888888889999999 999988665543 34455555555553
No 80
>COG4967 PilV Tfp pilus assembly protein PilV [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=21.26 E-value=47 Score=23.66 Aligned_cols=28 Identities=25% Similarity=0.115 Sum_probs=21.9
Q ss_pred CCCCccccccCCCCchhhhccCCcccee
Q 034296 70 PGKAVGVRVDGKGAPVDAAAAKPVCCCW 97 (99)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (99)
+.+..+.-+.+++++.+++.+++-||||
T Consensus 104 ~~el~~~~~~~~~~~~~a~~~~~~~~~~ 131 (162)
T COG4967 104 AAELSRWSVHCSNAAPDAANAGYSQCVD 131 (162)
T ss_pred hhhhccchhhcccccccccccCcceeec
Confidence 3455555678889999999999999987
No 81
>PF08127 Propeptide_C1: Peptidase family C1 propeptide; InterPro: IPR012599 This domain is found at the N-terminal of cathepsin B and cathepsin B-like peptidases that belong to MEROPS peptidase subfamily C1A. Cathepsin B are lysosomal cysteine proteinases belonging to the papain superfamily and are unique in their ability to act as both an endo- and an exopeptidases. They are synthesized as inactive zymogens. Activation of the peptidases occurs with the removal of the propeptide [, ]. ; GO: 0004197 cysteine-type endopeptidase activity, 0050790 regulation of catalytic activity; PDB: 1MIR_A 1PBH_A 2PBH_A 3PBH_A.
Probab=20.74 E-value=1.6e+02 Score=16.04 Aligned_cols=20 Identities=5% Similarity=0.283 Sum_probs=11.7
Q ss_pred HHHHHHHHHhcCCCceeecCCC
Q 034296 11 ESGLKSLDQYLSGKSYISGNQL 32 (99)
Q Consensus 11 ~~~L~~Le~~L~~~~yl~G~~~ 32 (99)
++.++++|+. +.+|-+|-.|
T Consensus 3 de~I~~IN~~--~~tWkAG~NF 22 (41)
T PF08127_consen 3 DEFIDYINSK--NTTWKAGRNF 22 (41)
T ss_dssp HHHHHHHHHC--T-SEEE----
T ss_pred HHHHHHHHcC--CCcccCCCCC
Confidence 4677888875 7789999765
Done!