BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034297
(99 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LA16|ALFL7_ARATH PHD finger protein ALFIN-LIKE 7 OS=Arabidopsis thaliana GN=AL7 PE=1
SV=1
Length = 252
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/62 (91%), Positives = 61/62 (98%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAKQP 60
MQEKDW+SLVAVHSDSWL++VAFYFGARFGFGKNERK+LFQMINDLPTIFEVVTGNAKQ
Sbjct: 85 MQEKDWISLVAVHSDSWLISVAFYFGARFGFGKNERKRLFQMINDLPTIFEVVTGNAKQS 144
Query: 61 KD 62
KD
Sbjct: 145 KD 146
>sp|Q8S8M9|ALFL6_ARATH PHD finger protein ALFIN-LIKE 6 OS=Arabidopsis thaliana GN=AL6 PE=2
SV=1
Length = 256
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/73 (80%), Positives = 66/73 (90%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAKQP 60
MQEKDW+SLVAVHSDSWLL+VAFYFGARFGFGKNERK+LFQMIN+LPTIFEVV+GNAKQ
Sbjct: 85 MQEKDWVSLVAVHSDSWLLSVAFYFGARFGFGKNERKRLFQMINELPTIFEVVSGNAKQS 144
Query: 61 KDPYLLNPFSGSR 73
KD + N S S+
Sbjct: 145 KDLSVNNNNSKSK 157
>sp|Q40359|ALFIN_MEDSA PHD finger protein Alfin1 OS=Medicago sativa GN=ALFIN-1 PE=1 SV=1
Length = 257
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/62 (88%), Positives = 59/62 (95%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAKQP 60
MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKN+RK+LFQMINDLPT+FE+ TG AKQ
Sbjct: 86 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNDRKRLFQMINDLPTVFELATGTAKQS 145
Query: 61 KD 62
KD
Sbjct: 146 KD 147
>sp|Q6YTY3|ALFL9_ORYSJ PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. japonica
GN=Os07g0608400 PE=2 SV=1
Length = 278
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/58 (82%), Positives = 55/58 (94%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAK 58
MQEKDWLS+VAVHSD+WLL+VAFYFGARFGF KN+RK+LF MINDLPTIFEVV+G +K
Sbjct: 83 MQEKDWLSMVAVHSDAWLLSVAFYFGARFGFDKNDRKRLFGMINDLPTIFEVVSGKSK 140
>sp|B8B8C5|ALFL9_ORYSI PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. indica
GN=OsI_26819 PE=3 SV=1
Length = 277
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/58 (82%), Positives = 55/58 (94%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAK 58
MQEKDWLS+VAVHSD+WLL+VAFYFGARFGF KN+RK+LF MINDLPTIFEVV+G +K
Sbjct: 83 MQEKDWLSMVAVHSDAWLLSVAFYFGARFGFDKNDRKRLFGMINDLPTIFEVVSGKSK 140
>sp|Q2R837|ALFL8_ORYSJ PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. japonica
GN=Os11g0244800 PE=2 SV=1
Length = 254
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/59 (81%), Positives = 53/59 (89%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAKQ 59
M EKDWLSLVAVHSD+WLLAVAFYFGARFGF K RK+LF MIN+LPTI+EVVTG AK+
Sbjct: 83 MDEKDWLSLVAVHSDTWLLAVAFYFGARFGFDKESRKRLFSMINNLPTIYEVVTGTAKK 141
>sp|B8BJV8|ALFL8_ORYSI PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. indica
GN=OsI_35671 PE=3 SV=1
Length = 254
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/59 (81%), Positives = 53/59 (89%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAKQ 59
M EKDWLSLVAVHSD+WLLAVAFYFGARFGF K RK+LF MIN+LPTI+EVVTG AK+
Sbjct: 83 MDEKDWLSLVAVHSDTWLLAVAFYFGARFGFDKESRKRLFSMINNLPTIYEVVTGTAKK 141
>sp|A2WXR5|ALFL6_ORYSI PHD finger protein ALFIN-LIKE 6 OS=Oryza sativa subsp. indica
GN=OsI_04717 PE=3 SV=1
Length = 272
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 46/59 (77%), Positives = 53/59 (89%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAKQ 59
M EKDWL+LVAVHSDSWLL+VAFYFGARFGF + R++LF MIN+LPTIFEVVTG AK+
Sbjct: 103 MNEKDWLALVAVHSDSWLLSVAFYFGARFGFDREARRRLFNMINNLPTIFEVVTGAAKK 161
>sp|Q7F2Z1|ALFL6_ORYSJ PHD finger protein ALFIN-LIKE 6 OS=Oryza sativa subsp. japonica
GN=Os01g0887700 PE=2 SV=1
Length = 272
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 46/59 (77%), Positives = 53/59 (89%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAKQ 59
M EKDWL+LVAVHSDSWLL+VAFYFGARFGF + R++LF MIN+LPTIFEVVTG AK+
Sbjct: 103 MNEKDWLALVAVHSDSWLLSVAFYFGARFGFDREARRRLFNMINNLPTIFEVVTGAAKK 161
>sp|Q60DW3|ALFL5_ORYSJ PHD finger protein ALFIN-LIKE 5 OS=Oryza sativa subsp. japonica
GN=Os05g0419100 PE=2 SV=1
Length = 258
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 52/59 (88%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAKQ 59
M EKDWL+LVAVHSDSWLLAVAFYF ARFGF K R++LF MIN+LPTIFEVVTG AK+
Sbjct: 87 MNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKEARRRLFNMINNLPTIFEVVTGAAKK 145
>sp|A2Y4R8|ALFL5_ORYSI PHD finger protein ALFIN-LIKE 5 OS=Oryza sativa subsp. indica
GN=OsI_19996 PE=3 SV=1
Length = 258
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 52/59 (88%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAKQ 59
M EKDWL+LVAVHSDSWLLAVAFYF ARFGF K R++LF MIN+LPTIFEVVTG AK+
Sbjct: 87 MNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKEARRRLFNMINNLPTIFEVVTGAAKK 145
>sp|Q5XEM9|ALFL5_ARATH PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis thaliana GN=AL5 PE=2
SV=1
Length = 260
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 44/63 (69%), Positives = 58/63 (92%), Gaps = 1/63 (1%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNA-KQ 59
MQE++WLSLVAVHSD+WLL+V+FYFG+RFGF + +RK+LF MIN++PT++EVVTGNA KQ
Sbjct: 86 MQERNWLSLVAVHSDAWLLSVSFYFGSRFGFDRADRKRLFSMINEVPTVYEVVTGNAEKQ 145
Query: 60 PKD 62
K+
Sbjct: 146 TKE 148
>sp|Q6Z7F4|ALFL7_ORYSJ PHD finger protein ALFIN-LIKE 7 OS=Oryza sativa subsp. japonica
GN=Os02g0564100 PE=2 SV=1
Length = 267
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/59 (76%), Positives = 52/59 (88%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAKQ 59
M EKDWLSLVAVHSD+WLL+VAFYFGARFGF K R++LF MIN LPT++EVVTG AK+
Sbjct: 102 MIEKDWLSLVAVHSDAWLLSVAFYFGARFGFDKEARRRLFTMINGLPTVYEVVTGIAKK 160
>sp|B8ADZ3|ALFL7_ORYSI PHD finger protein ALFIN-LIKE 7 OS=Oryza sativa subsp. indica
GN=OsI_07694 PE=3 SV=1
Length = 267
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/59 (76%), Positives = 52/59 (88%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAKQ 59
M EKDWLSLVAVHSD+WLL+VAFYFGARFGF K R++LF MIN LPT++EVVTG AK+
Sbjct: 102 MIEKDWLSLVAVHSDAWLLSVAFYFGARFGFDKEARRRLFTMINGLPTVYEVVTGIAKK 160
>sp|Q9M2B4|ALFL3_ARATH PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana GN=AL3 PE=2
SV=1
Length = 250
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/58 (74%), Positives = 52/58 (89%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAK 58
+ EK+WLSLVA+HSD+WLL+V+FYFG+RF F K ERK+LF MIND+PTIFEVVTG AK
Sbjct: 86 LSEKEWLSLVAIHSDAWLLSVSFYFGSRFSFHKEERKRLFNMINDVPTIFEVVTGMAK 143
>sp|A2XTW9|ALFL4_ORYSI PHD finger protein ALFIN-LIKE 4 OS=Oryza sativa subsp. indica
GN=OsI_16049 PE=3 SV=1
Length = 256
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 49/55 (89%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTG 55
MQEKDWLSL+AVHSDSWLL+VAFYFGARFGF K R++LF M + LPT+FEVV+G
Sbjct: 90 MQEKDWLSLIAVHSDSWLLSVAFYFGARFGFDKKARERLFMMTSSLPTVFEVVSG 144
>sp|Q7XUW3|ALFL4_ORYSJ PHD finger protein ALFIN-LIKE 4 OS=Oryza sativa subsp. japonica
GN=Os04g0444900 PE=2 SV=2
Length = 256
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 49/55 (89%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTG 55
MQEKDWLSL+AVHSDSWLL+VAFYFGARFGF K R++LF M + LPT+FEVV+G
Sbjct: 90 MQEKDWLSLIAVHSDSWLLSVAFYFGARFGFDKKARERLFMMTSSLPTVFEVVSG 144
>sp|Q9SRM4|ALFL2_ARATH PHD finger protein ALFIN-LIKE 2 OS=Arabidopsis thaliana GN=AL2 PE=2
SV=1
Length = 246
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 48/55 (87%), Gaps = 2/55 (3%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTG 55
MQ KDWLSLVAVHSD WLL+V+FYFGAR +NERK+LF +INDLPT+F+VVTG
Sbjct: 86 MQRKDWLSLVAVHSDCWLLSVSFYFGAR--LNRNERKRLFSLINDLPTLFDVVTG 138
>sp|Q9FFF5|ALFL1_ARATH PHD finger protein ALFIN-LIKE 1 OS=Arabidopsis thaliana GN=AL1 PE=1
SV=1
Length = 241
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 47/55 (85%), Gaps = 2/55 (3%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTG 55
MQ KDWLSLVAVHSD WLL+V+ YFGAR +NERK+LF +INDLPT+FEVVTG
Sbjct: 84 MQRKDWLSLVAVHSDCWLLSVSSYFGAR--LNRNERKRLFSLINDLPTLFEVVTG 136
>sp|Q75IR6|ALFL1_ORYSJ PHD finger protein ALFIN-LIKE 1 OS=Oryza sativa subsp. japonica
GN=Os05g0163100 PE=2 SV=1
Length = 258
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 52/62 (83%), Gaps = 3/62 (4%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAKQP 60
M +DWL+LVAVHSDSWL++VAFY+ AR +N+RK+LF M+NDLPT++EVV+G ++Q
Sbjct: 99 MNRRDWLALVAVHSDSWLVSVAFYYAAR--LNRNDRKRLFGMMNDLPTVYEVVSG-SRQS 155
Query: 61 KD 62
K+
Sbjct: 156 KE 157
>sp|A2Y0Q2|ALFL1_ORYSI PHD finger protein ALFIN-LIKE 1 OS=Oryza sativa subsp. indica
GN=OsI_18576 PE=3 SV=1
Length = 258
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 52/62 (83%), Gaps = 3/62 (4%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAKQP 60
M +DWL+LVAVHSDSWL++VAFY+ AR +N+RK+LF M+NDLPT++EVV+G ++Q
Sbjct: 99 MNRRDWLALVAVHSDSWLVSVAFYYAAR--LNRNDRKRLFGMMNDLPTVYEVVSG-SRQS 155
Query: 61 KD 62
K+
Sbjct: 156 KE 157
>sp|O81488|ALFL4_ARATH PHD finger protein ALFIN-LIKE 4 OS=Arabidopsis thaliana GN=AL4 PE=1
SV=2
Length = 255
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 55/63 (87%), Gaps = 1/63 (1%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNA-KQ 59
M EKDWLSLVAVHSD+WLLAVAF+FGARFGF K +RK+LF M+NDLPTIFEVV G A KQ
Sbjct: 85 MAEKDWLSLVAVHSDAWLLAVAFFFGARFGFDKADRKRLFNMVNDLPTIFEVVAGTAKKQ 144
Query: 60 PKD 62
KD
Sbjct: 145 GKD 147
>sp|Q84TV4|ALFL3_ORYSJ PHD finger protein ALFIN-LIKE 3 OS=Oryza sativa subsp. japonica
GN=Os03g0818300 PE=2 SV=1
Length = 247
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 43/53 (81%), Gaps = 2/53 (3%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVV 53
M +DWLSLVAVHSDSWL++VAF+F AR NERK+LF MINDLPT++E +
Sbjct: 89 MNRRDWLSLVAVHSDSWLVSVAFFFAAR--LNGNERKRLFNMINDLPTVYEAL 139
>sp|B8AMA8|ALFL3_ORYSI PHD finger protein ALFIN-LIKE 3 OS=Oryza sativa subsp. indica
GN=OsI_14081 PE=3 SV=2
Length = 247
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 43/53 (81%), Gaps = 2/53 (3%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVV 53
M +DWLSLVAVHSDSWL++VAF+F AR NERK+LF MINDLPT++E +
Sbjct: 89 MNRRDWLSLVAVHSDSWLVSVAFFFAAR--LNGNERKRLFNMINDLPTVYEAL 139
>sp|Q8H383|ALFL2_ORYSJ PHD finger protein ALFIN-LIKE 2 OS=Oryza sativa subsp. japonica
GN=Os07g0233300 PE=2 SV=1
Length = 244
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 43/54 (79%), Gaps = 2/54 (3%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVT 54
M +DWLSLVAVHSDSWLL+VAF+FGAR NERK+LF +IND PT+ E ++
Sbjct: 87 MHRRDWLSLVAVHSDSWLLSVAFFFGAR--LNGNERKRLFSLINDHPTVLEALS 138
>sp|B8B8I3|ALFL2_ORYSI PHD finger protein ALFIN-LIKE 2 OS=Oryza sativa subsp. indica
GN=OsI_25444 PE=3 SV=1
Length = 244
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 43/54 (79%), Gaps = 2/54 (3%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVT 54
M +DWLSLVAVHSDSWLL+VAF+FGAR NERK+LF +IND PT+ E ++
Sbjct: 87 MHRRDWLSLVAVHSDSWLLSVAFFFGAR--LNGNERKRLFSLINDHPTVLEALS 138
>sp|Q8CAL5|GPC5_MOUSE Glypican-5 OS=Mus musculus GN=Gpc5 PE=2 SV=1
Length = 572
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 41 QMINDLPTIFEVVTGNAKQPKDPYLLNPFSGSRILRNFSGRC-------GSSWRWLQRNL 93
Q+I+ L + +++ G + +P LL P SG +L N SG C GS ++R L
Sbjct: 457 QIIDKLKHVIQLLRGRSPKPNKWELLQPGSGGGMLENSSGDCDDEDGCGGSGSGEVKRTL 516
Query: 94 KL 95
K+
Sbjct: 517 KI 518
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.448
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,405,402
Number of Sequences: 539616
Number of extensions: 1422331
Number of successful extensions: 3512
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3477
Number of HSP's gapped (non-prelim): 27
length of query: 99
length of database: 191,569,459
effective HSP length: 68
effective length of query: 31
effective length of database: 154,875,571
effective search space: 4801142701
effective search space used: 4801142701
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)