BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034317
(98 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225446831|ref|XP_002283566.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic [Vitis
vinifera]
gi|147799091|emb|CAN74831.1| hypothetical protein VITISV_023674 [Vitis vinifera]
Length = 270
Score = 201 bits (511), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 98/98 (100%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 173 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 232
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 233 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 270
>gi|255548299|ref|XP_002515206.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223545686|gb|EEF47190.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 267
Score = 201 bits (510), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 98/98 (100%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
>gi|102139977|gb|ABF70112.1| chlorophyll A-B binding protein (CAB), putative [Musa balbisiana]
Length = 267
Score = 201 bits (510), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 98/98 (100%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
>gi|224068679|ref|XP_002302798.1| predicted protein [Populus trichocarpa]
gi|222844524|gb|EEE82071.1| predicted protein [Populus trichocarpa]
Length = 266
Score = 201 bits (510), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 98/98 (100%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 266
>gi|102139745|gb|ABF69952.1| chlorophyll A-B binding protein (CAB), putative [Musa acuminata]
Length = 265
Score = 200 bits (509), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 98/98 (100%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|226358409|gb|ACO51067.1| chloroplast chlorophyll A-B binding protein [Gossypium hirsutum]
Length = 264
Score = 200 bits (509), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 98/98 (100%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 167 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 227 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
>gi|225463428|ref|XP_002274942.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic
isoform 1 [Vitis vinifera]
gi|359483839|ref|XP_003633024.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic
isoform 2 [Vitis vinifera]
gi|147776663|emb|CAN67709.1| hypothetical protein VITISV_003096 [Vitis vinifera]
Length = 264
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/98 (100%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 167 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 227 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
>gi|225463432|ref|XP_002275075.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic [Vitis
vinifera]
Length = 264
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/98 (100%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 167 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 227 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
>gi|147857734|emb|CAN78667.1| hypothetical protein VITISV_031287 [Vitis vinifera]
Length = 264
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/98 (100%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 167 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 227 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
>gi|353167261|gb|AEQ67395.1| chloroplast chlorophyll A/B binding protein [Canarium album]
Length = 264
Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/98 (100%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 167 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 227 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
>gi|9587207|gb|AAF89207.1|AF279250_1 LHCII type I chlorophyll a/b-binding protein [Vigna radiata]
Length = 264
Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 167 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 227 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
>gi|356559635|ref|XP_003548104.1| PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like
[Glycine max]
Length = 264
Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 167 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 227 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
>gi|358248490|ref|NP_001240146.1| chlorophyll a-b binding protein 21, chloroplastic-like [Glycine
max]
gi|506629|gb|AAA50172.1| photosystem II type I chlorophyll a/b-binding protein [Glycine max]
gi|255636158|gb|ACU18421.1| unknown [Glycine max]
Length = 264
Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 167 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 227 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
>gi|188572008|gb|ACD64978.1| chloroplast chlorophyll a/b-binding protein [Ophiopogon japonicus]
Length = 264
Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/98 (98%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAF+ELKVKEIKNGRLAMFSMFGF
Sbjct: 167 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFSELKVKEIKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 227 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
>gi|356559639|ref|XP_003548106.1| PREDICTED: chlorophyll a-b binding protein 21, chloroplastic
isoform 1 [Glycine max]
gi|356559641|ref|XP_003548107.1| PREDICTED: chlorophyll a-b binding protein 21, chloroplastic
isoform 2 [Glycine max]
gi|356559643|ref|XP_003548108.1| PREDICTED: chlorophyll a-b binding protein 21, chloroplastic
isoform 3 [Glycine max]
Length = 264
Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 167 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 227 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
>gi|305377032|dbj|BAJ15879.1| chlorophyll a/b binding protein-like protein [Torenia fournieri]
Length = 129
Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/98 (100%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 32 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 91
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 92 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 129
>gi|237651899|gb|ACR08639.1| chloroplast chlorophyll A/B binding protein [Mangifera indica]
Length = 264
Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/98 (98%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 167 MGAVEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 227 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
>gi|3928140|emb|CAA10284.1| chlorophyll a/b binding protein [Cicer arietinum]
Length = 266
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHL+DPVNNNAWAYATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHLSDPVNNNAWAYATNFVPGK 266
>gi|379069812|gb|AFC91647.1| chloroplast chlorophyll A/B binding protein [Hevea brasiliensis]
Length = 265
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/98 (98%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|255557387|ref|XP_002519724.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223541141|gb|EEF42697.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 265
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|255567270|ref|XP_002524616.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223536169|gb|EEF37824.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 265
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|693920|gb|AAA80593.1| chlorophyll a/b binding protein [Solanum tuberosum]
Length = 265
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/98 (98%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|302584050|gb|ADL57411.1| chloroplast LHCII type I chlorophyll a-b binding precursor protein
[Ipomoea nil]
Length = 179
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGE+TDPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 82 MGAVEGYRIAGGPLGEITDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 141
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 142 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 179
>gi|449527933|ref|XP_004170962.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like [Cucumis sativus]
Length = 265
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|449433646|ref|XP_004134608.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like [Cucumis sativus]
Length = 265
Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|449433636|ref|XP_004134603.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like isoform 1 [Cucumis sativus]
gi|449433638|ref|XP_004134604.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like isoform 2 [Cucumis sativus]
gi|449433640|ref|XP_004134605.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like isoform 3 [Cucumis sativus]
Length = 265
Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|104763696|gb|ABF74606.1| chloroplast chlorophyll a/b-binding protein [Agave tequilana]
Length = 186
Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/98 (98%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 89 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 148
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 149 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 186
>gi|115821|sp|P14275.1|CB2C_SOLLC RecName: Full=Chlorophyll a-b binding protein 1C, chloroplastic;
AltName: Full=LHCII type I CAB-1C; Short=LHCP; Flags:
Precursor
Length = 265
Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
>gi|224928|prf||1204205C protein 1C,chlorophyll binding
Length = 165
Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 68 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 127
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 128 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 165
>gi|115438250|ref|NP_001043493.1| Os01g0600900 [Oryza sativa Japonica Group]
gi|82654918|sp|P12331.2|CB22_ORYSJ RecName: Full=Chlorophyll a-b binding protein 2, chloroplastic;
AltName: Full=LHCII type I CAB-2; Short=LHCP; Flags:
Precursor
gi|53793541|dbj|BAD52990.1| putative a/b-binding protein precursor [Oryza sativa Japonica
Group]
gi|113533024|dbj|BAF05407.1| Os01g0600900 [Oryza sativa Japonica Group]
gi|125526713|gb|EAY74827.1| hypothetical protein OsI_02717 [Oryza sativa Indica Group]
gi|125605334|gb|EAZ44370.1| hypothetical protein OsJ_28992 [Oryza sativa Japonica Group]
gi|215767332|dbj|BAG99560.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768322|dbj|BAH00551.1| unnamed protein product [Oryza sativa Japonica Group]
gi|385718790|gb|AFI71822.1| chlorophyll a/b-binding protein [Oryza sativa]
Length = 261
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/98 (98%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 164 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 223
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 224 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 261
>gi|94404555|gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
cathayensis]
Length = 267
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
>gi|289920|gb|AAA18529.1| chlorophyll A/B binding protein [Gossypium hirsutum]
Length = 264
Score = 198 bits (504), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/98 (98%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLG ADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 167 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGFADDPEAFAELKVKEIKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 227 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
>gi|3036953|dbj|BAA25395.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 267
Score = 198 bits (504), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYR+AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENL DHLADPVNNNAWAYATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLVDHLADPVNNNAWAYATNFVPGK 267
>gi|3036951|dbj|BAA25394.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 267
Score = 198 bits (504), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
>gi|449479523|ref|XP_004155624.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like [Cucumis sativus]
Length = 153
Score = 198 bits (504), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 56 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 115
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 116 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 153
>gi|3293555|gb|AAC25775.1| chlorophyll a/b binding protein [Medicago sativa]
Length = 266
Score = 198 bits (504), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 266
>gi|449455992|ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Cucumis sativus]
gi|449525484|ref|XP_004169747.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Cucumis sativus]
Length = 267
Score = 198 bits (504), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGE+TDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
>gi|388503990|gb|AFK40061.1| unknown [Medicago truncatula]
Length = 266
Score = 198 bits (504), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 266
>gi|3417451|dbj|BAA32346.1| light-harvesting chlorophyll a/b-binding protein of photosystem II
[Cryptomeria japonica]
Length = 266
Score = 198 bits (504), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGE+TDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRVAGGPLGEITDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
+VQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 229 YVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 266
>gi|255646685|gb|ACU23816.1| unknown [Glycine max]
Length = 263
Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 166 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 225
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 226 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 263
>gi|413968348|gb|AFW90512.1| chlorophyll a/b-binding protein [Phaseolus vulgaris]
Length = 263
Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGE+TDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 166 MGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 225
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 226 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 263
>gi|359806638|ref|NP_001241277.1| uncharacterized protein LOC100805310 [Glycine max]
gi|255647962|gb|ACU24438.1| unknown [Glycine max]
Length = 263
Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 166 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 225
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 226 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 263
>gi|115768|sp|P08221.1|CB21_CUCSA RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|167523|gb|AAA33124.1| chlorophyll a/b-binding protein, partial [Cucumis sativus]
Length = 255
Score = 198 bits (503), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 158 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 217
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 218 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 255
>gi|351724927|ref|NP_001235283.1| chlorophyll a/b-binding protein [Glycine max]
gi|1053216|gb|AAA80688.1| chlorophyll a/b-binding protein [Glycine max]
Length = 263
Score = 198 bits (503), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 166 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 225
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 226 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 263
>gi|115825|sp|P07369.1|CB2G_SOLLC RecName: Full=Chlorophyll a-b binding protein 3C, chloroplastic;
AltName: Full=LHCII type I CAB-3C; Short=LHCP; Flags:
Precursor
gi|224932|prf||1204205G protein 3C,chlorophyll binding
Length = 267
Score = 198 bits (503), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 267
>gi|388507164|gb|AFK41648.1| unknown [Lotus japonicus]
Length = 160
Score = 198 bits (503), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 63 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 122
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHL+DPVNNNAWAYATNFVPGK
Sbjct: 123 FVQAIVTGKGPLENLADHLSDPVNNNAWAYATNFVPGK 160
>gi|9587205|gb|AAF89206.1|AF279249_1 LHCII type I chlorophyll a/b-binding protein [Vigna radiata]
Length = 264
Score = 198 bits (503), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFS+FGF
Sbjct: 167 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSIFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 227 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
>gi|21419|emb|CAA78379.1| chlorophyll a/b-binding protein PS II-Type I [Solanum tuberosum]
Length = 267
Score = 198 bits (503), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 267
>gi|115478691|ref|NP_001062939.1| Os09g0346500 [Oryza sativa Japonica Group]
gi|82654917|sp|P12330.2|CB21_ORYSJ RecName: Full=Chlorophyll a-b binding protein 1, chloroplastic;
AltName: Full=LHCII type I CAB-1; Short=LHCP; Flags:
Precursor
gi|50252362|dbj|BAD28469.1| putative chlorophyll a-b binding protein, chloroplast precursor
(LHCII type I CAB) (LHCP) [Oryza sativa Japonica Group]
gi|50252884|dbj|BAD29115.1| putative chlorophyll a-b binding protein, chloroplast precursor
(LHCII type I CAB) (LHCP) [Oryza sativa Japonica Group]
gi|113631172|dbj|BAF24853.1| Os09g0346500 [Oryza sativa Japonica Group]
gi|215737437|dbj|BAG96567.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737443|dbj|BAG96573.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737483|dbj|BAG96613.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765877|dbj|BAG87574.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201978|gb|EEC84405.1| hypothetical protein OsI_30987 [Oryza sativa Indica Group]
Length = 265
Score = 198 bits (503), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|255647011|gb|ACU23974.1| unknown [Glycine max]
Length = 264
Score = 198 bits (503), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+K+GRLAMFSMFGF
Sbjct: 167 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKHGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 227 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
>gi|115823|sp|P14276.1|CB2E_SOLLC RecName: Full=Chlorophyll a-b binding protein 3A, chloroplastic;
AltName: Full=LHCII type I CAB-3A; Short=LHCP; Flags:
Precursor
Length = 267
Score = 198 bits (503), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADH+ADPVNNNAWA+ATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 267
>gi|82076|pir||E24039 chlorophyll a/b-binding protein 3A precursor - tomato (fragments)
gi|224930|prf||1204205E protein 3A,chlorophyll binding
Length = 167
Score = 198 bits (503), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 70 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 129
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADH+ADPVNNNAWA+ATNFVPGK
Sbjct: 130 FVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 167
>gi|242053513|ref|XP_002455902.1| hypothetical protein SORBIDRAFT_03g027040 [Sorghum bicolor]
gi|241927877|gb|EES01022.1| hypothetical protein SORBIDRAFT_03g027040 [Sorghum bicolor]
Length = 265
Score = 198 bits (503), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|115824|sp|P14277.1|CB2F_SOLLC RecName: Full=Chlorophyll a-b binding protein 3B, chloroplastic;
AltName: Full=LHCII type I CAB-3B; Short=LHCP; Flags:
Precursor
Length = 267
Score = 198 bits (503), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADH+ADPVNNNAWA+ATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 267
>gi|82077|pir||F24039 chlorophyll a/b-binding protein 3B precursor - tomato (fragments)
gi|224931|prf||1204205F protein 3B,chlorophyll binding
Length = 167
Score = 198 bits (503), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 70 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 129
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADH+ADPVNNNAWA+ATNFVPGK
Sbjct: 130 FVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 167
>gi|449459364|ref|XP_004147416.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like
[Cucumis sativus]
Length = 265
Score = 198 bits (503), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHL DPVNNNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK 265
>gi|82074|pir||A24039 chlorophyll a/b-binding protein 1A precursor - tomato (fragments)
gi|224926|prf||1204205A protein 1A,chlorophyll binding
Length = 165
Score = 197 bits (502), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 68 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 127
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 128 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 165
>gi|3036949|dbj|BAA25393.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 266
Score = 197 bits (502), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 266
>gi|449461699|ref|XP_004148579.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
[Cucumis sativus]
gi|449518125|ref|XP_004166094.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
[Cucumis sativus]
Length = 265
Score = 197 bits (502), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGE+TDP+YPGGSFDPLGLADDPEAF+ELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|115808|sp|P04783.1|CB25_PETSP RecName: Full=Chlorophyll a-b binding protein 91R, chloroplastic;
AltName: Full=LHCII type I CAB-91R; Short=LHCP; Flags:
Precursor
gi|20487|emb|CAA26209.1| unnamed protein product [Petunia sp.]
Length = 267
Score = 197 bits (502), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267
>gi|3036942|dbj|BAA25388.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 265
Score = 197 bits (502), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|148514657|gb|ABQ81856.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 265
Score = 197 bits (502), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|115820|sp|P15194.1|CB2B_PINSY RecName: Full=Chlorophyll a-b binding protein type 2 member 1B,
chloroplastic; AltName: Full=Chlorophyll a-b binding
protein type II 1B; Short=CAB; AltName: Full=LHCP;
Flags: Precursor
gi|20665|emb|CAA32658.1| unnamed protein product [Pinus sylvestris]
Length = 274
Score = 197 bits (502), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 177 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 236
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 237 FVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 274
>gi|326496044|dbj|BAJ90643.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326503592|dbj|BAJ86302.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 265
Score = 197 bits (502), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEVKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
>gi|3036955|dbj|BAA25396.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 267
Score = 197 bits (502), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
>gi|693914|gb|AAA80589.1| chlorophyll a/b binding protein [Solanum tuberosum]
Length = 265
Score = 197 bits (502), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
>gi|115439621|ref|NP_001044090.1| Os01g0720500 [Oryza sativa Japonica Group]
gi|18461220|dbj|BAB84417.1| putative chlorophyll a/b-binding protein 3C precursor [Oryza sativa
Japonica Group]
gi|113533621|dbj|BAF06004.1| Os01g0720500 [Oryza sativa Japonica Group]
gi|125527527|gb|EAY75641.1| hypothetical protein OsI_03546 [Oryza sativa Indica Group]
gi|125571846|gb|EAZ13361.1| hypothetical protein OsJ_03282 [Oryza sativa Japonica Group]
gi|215678907|dbj|BAG96337.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215679047|dbj|BAG96477.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215764952|dbj|BAG86649.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 197 bits (502), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|3036948|dbj|BAA25392.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 267
Score = 197 bits (502), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
>gi|115805|sp|P27495.1|CB24_TOBAC RecName: Full=Chlorophyll a-b binding protein 40, chloroplastic;
AltName: Full=LHCII type I CAB-40; Short=LHCP; Flags:
Precursor
gi|19829|emb|CAA36958.1| unnamed protein product [Nicotiana tabacum]
Length = 267
Score = 197 bits (502), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
>gi|226502967|ref|NP_001142284.1| uncharacterized protein LOC100274453 [Zea mays]
gi|194708004|gb|ACF88086.1| unknown [Zea mays]
gi|195613594|gb|ACG28627.1| chlorophyll a-b binding protein 2 [Zea mays]
gi|413950532|gb|AFW83181.1| light harvesting chlorophyll a/b binding protein1 isoform 1 [Zea
mays]
gi|413950533|gb|AFW83182.1| light harvesting chlorophyll a/b binding protein1 isoform 2 [Zea
mays]
Length = 264
Score = 197 bits (502), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 167 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 227 FVQAIVTGKGPVENLADHLADPVNNNAWAYATNFVPGK 264
>gi|115816|sp|P14274.1|CB2A_SOLLC RecName: Full=Chlorophyll a-b binding protein 1A, chloroplastic;
AltName: Full=LHCII type I CAB-1A; Short=LHCP; Flags:
Precursor
Length = 265
Score = 197 bits (502), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
>gi|115784|sp|P08222.1|CB22_CUCSA RecName: Full=Chlorophyll a-b binding protein of LHCII type 1;
AltName: Full=Chlorophyll a-b binding protein of LHCII
type I; Short=CAB; Short=LHCP
gi|167525|gb|AAA33125.1| chlorophyll a/b-binding protein, partial [Cucumis sativus]
Length = 206
Score = 197 bits (501), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 109 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 168
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 169 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 206
>gi|356532722|ref|XP_003534920.1| PREDICTED: chlorophyll a-b binding protein 3, chloroplastic-like
[Glycine max]
Length = 125
Score = 197 bits (501), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 28 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 87
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 88 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 125
>gi|242088861|ref|XP_002440263.1| hypothetical protein SORBIDRAFT_09g028720 [Sorghum bicolor]
gi|241945548|gb|EES18693.1| hypothetical protein SORBIDRAFT_09g028720 [Sorghum bicolor]
Length = 265
Score = 197 bits (501), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|242053511|ref|XP_002455901.1| hypothetical protein SORBIDRAFT_03g027030 [Sorghum bicolor]
gi|241927876|gb|EES01021.1| hypothetical protein SORBIDRAFT_03g027030 [Sorghum bicolor]
Length = 266
Score = 197 bits (501), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 266
>gi|224083006|ref|XP_002306927.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa]
gi|118487931|gb|ABK95787.1| unknown [Populus trichocarpa]
gi|118489514|gb|ABK96559.1| unknown [Populus trichocarpa x Populus deltoides]
gi|118489848|gb|ABK96723.1| unknown [Populus trichocarpa x Populus deltoides]
gi|118489863|gb|ABK96730.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222856376|gb|EEE93923.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa]
Length = 264
Score = 197 bits (501), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 167 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHL+DPVNNNAWAYATNFVPGK
Sbjct: 227 FVQAIVTGKGPLENLADHLSDPVNNNAWAYATNFVPGK 264
>gi|3036945|dbj|BAA25390.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 265
Score = 197 bits (501), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 265
>gi|20182|emb|CAA32109.1| chlorophyll a/b-binding preprotein (AA -28 to 235) [Oryza sativa]
Length = 263
Score = 197 bits (501), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 166 MGAVEGYRIAGGPLGEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 225
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 226 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 263
>gi|3036946|dbj|BAA25391.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 265
Score = 197 bits (501), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|413948509|gb|AFW81158.1| light harvesting chlorophyll a/b binding protein3 [Zea mays]
Length = 302
Score = 197 bits (501), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 205 MGAIEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 264
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 265 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 302
>gi|226510115|ref|NP_001148439.1| chlorophyll a-b binding protein 2 [Zea mays]
gi|195619284|gb|ACG31472.1| chlorophyll a-b binding protein 2 [Zea mays]
gi|414881723|tpg|DAA58854.1| TPA: chlorophyll a-b binding protein 2 [Zea mays]
Length = 264
Score = 197 bits (501), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 167 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADH+ADPVNNNAWAYATNFVPGK
Sbjct: 227 FVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPGK 264
>gi|115798|sp|P04781.1|CB23_PETSP RecName: Full=Chlorophyll a-b binding protein 22R, chloroplastic;
AltName: Full=LHCII type I CAB-22R; Short=LHCP; Flags:
Precursor
gi|20479|emb|CAA26213.1| unnamed protein product [Petunia sp.]
Length = 267
Score = 197 bits (500), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267
>gi|2196770|gb|AAB61236.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
Length = 267
Score = 197 bits (500), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYR+AGGPLGEVTDPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 267
>gi|385298939|gb|AFI60242.1| light harvesting chlorophyll a/b binding protein, partial [Panicum
virgatum]
Length = 260
Score = 197 bits (500), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 163 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 222
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 223 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 260
>gi|115812|sp|P27491.1|CB27_TOBAC RecName: Full=Chlorophyll a-b binding protein 7, chloroplastic;
AltName: Full=LHCII type I CAB-7; Short=LHCP; Flags:
Precursor
gi|19837|emb|CAA41187.1| chlorophyll a /b binding protein [Nicotiana tabacum]
Length = 267
Score = 197 bits (500), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYR+AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPL+NL DHLADPVNNNAWAYATNFVPGK
Sbjct: 230 FVQAIVTGKGPLDNLVDHLADPVNNNAWAYATNFVPGK 267
>gi|2804572|dbj|BAA24493.1| chlorophyll a/b-binding protein [Fagus crenata]
Length = 264
Score = 197 bits (500), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 167 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENLADHLADPV NNAWAYATNFVPGK
Sbjct: 227 FVQAIVTGKGPIENLADHLADPVTNNAWAYATNFVPGK 264
>gi|374095596|gb|AEY85026.1| light-harvesting complex II protein [Cajanus cajan]
Length = 262
Score = 197 bits (500), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 165 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 224
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHL+DPVN+NAWAYATNFVPGK
Sbjct: 225 FVQAIVTGKGPLENLADHLSDPVNSNAWAYATNFVPGK 262
>gi|219879136|gb|ACL50948.1| putative chloroplast chlorophyll a/b binding protein [Solanum
nigrum]
Length = 249
Score = 197 bits (500), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 152 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 211
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 212 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 249
>gi|115788|sp|P07371.1|CB22_PEA RecName: Full=Chlorophyll a-b binding protein AB80, chloroplastic;
AltName: Full=LHCII type I CAB-AB80; Short=LHCP; Flags:
Precursor
gi|169053|gb|AAA63413.1| cab precursor [Pisum sativum]
gi|169055|gb|AAA33651.1| polypeptide 15 precursor [Pisum sativum]
gi|223990|prf||1006296A protein,chlorophyll a/b binding
Length = 269
Score = 197 bits (500), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 172 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 231
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 232 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 269
>gi|693922|gb|AAA80594.1| chlorophyll a/b binding protein [Solanum tuberosum]
Length = 265
Score = 197 bits (500), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 265
>gi|297306780|dbj|BAJ08392.1| light harvesting chlorophyll a/b-binding protein Lhcb1 [Hordeum
vulgare subsp. vulgare]
Length = 266
Score = 197 bits (500), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
>gi|357148841|ref|XP_003574911.1| PREDICTED: uncharacterized protein LOC100846020 [Brachypodium
distachyon]
Length = 560
Score = 197 bits (500), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 93/98 (94%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGE+ DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 163 MGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 222
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 223 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 260
>gi|115814|sp|P27490.1|CB28_PEA RecName: Full=Chlorophyll a-b binding protein 8, chloroplastic;
AltName: Full=LHCII type I CAB-8; Flags: Precursor
gi|20669|emb|CAA39883.1| chlorophyll a/b binding protein [Pisum sativum]
Length = 268
Score = 197 bits (500), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 171 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 230
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHL+DPVNNNAW+YATNFVPGK
Sbjct: 231 FVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK 268
>gi|81074613|gb|ABB55370.1| chlorophyll a-b binding protein 3C-like [Solanum tuberosum]
Length = 267
Score = 197 bits (500), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 267
>gi|115804|sp|P04782.1|CB24_PETSP RecName: Full=Chlorophyll a-b binding protein 25, chloroplastic;
AltName: Full=LHCII type I CAB-25; Short=LHCP; Flags:
Precursor
gi|20483|emb|CAA26211.1| unnamed protein product [Petunia sp.]
Length = 266
Score = 197 bits (500), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
>gi|225461832|ref|XP_002285646.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic [Vitis
vinifera]
gi|147833686|emb|CAN73057.1| hypothetical protein VITISV_007597 [Vitis vinifera]
Length = 267
Score = 197 bits (500), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRI GGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRIGGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
>gi|115792|sp|P27493.1|CB22_TOBAC RecName: Full=Chlorophyll a-b binding protein 21, chloroplastic;
AltName: Full=LHCII type I CAB-21; Short=LHCP; Flags:
Precursor
gi|19823|emb|CAA36957.1| unnamed protein product [Nicotiana tabacum]
Length = 265
Score = 197 bits (500), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|414881722|tpg|DAA58853.1| TPA: hypothetical protein ZEAMMB73_924562 [Zea mays]
Length = 259
Score = 197 bits (500), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 162 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 221
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADH+ADPVNNNAWAYATNFVPGK
Sbjct: 222 FVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPGK 259
>gi|226263|prf||1503276A chlorophyll a/b binding protein
Length = 245
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPL LADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 148 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLALADDPEAFAELKVKELKNGRLAMFSMFGF 207
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 208 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 245
>gi|194703220|gb|ACF85694.1| unknown [Zea mays]
gi|195616570|gb|ACG30115.1| chlorophyll a-b binding protein 1 [Zea mays]
gi|195623468|gb|ACG33564.1| chlorophyll a-b binding protein 1 [Zea mays]
gi|413948507|gb|AFW81156.1| light harvesting chlorophyll a/b binding protein3 isoform 1 [Zea
mays]
gi|413948508|gb|AFW81157.1| light harvesting chlorophyll a/b binding protein3 isoform 2 [Zea
mays]
Length = 265
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGAIEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|168296|gb|AAA33396.1| light-harvesting chlorophyll a/b protein precursor [Lemna gibba]
Length = 266
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
>gi|194700378|gb|ACF84273.1| unknown [Zea mays]
gi|195619060|gb|ACG31360.1| chlorophyll a-b binding protein 2 [Zea mays]
Length = 266
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADH+ADPVNNNAWAYATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPGK 266
>gi|109157229|pdb|2BHW|A Chain A, Pea Light-Harvesting Complex Ii At 2.5 Angstrom Resolution
gi|109157230|pdb|2BHW|B Chain B, Pea Light-Harvesting Complex Ii At 2.5 Angstrom Resolution
gi|109157231|pdb|2BHW|C Chain C, Pea Light-Harvesting Complex Ii At 2.5 Angstrom Resolution
Length = 232
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 135 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 194
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 195 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 232
>gi|283549609|emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 precursor [Spinacia
oleracea]
Length = 267
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWSFATNFVPGK 267
>gi|157786302|gb|ABN49454.2| chloroplast chlorophyll a/b binding protein [Pisum sativum]
Length = 266
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHL+DPVNNNAW+YATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK 266
>gi|47169444|pdb|1VCR|A Chain A, An Icosahedral Assembly Of Light-Harvesting Chlorophyll AB
Protein Complex From Pea Thylakoid Membranes
Length = 232
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 135 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 194
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 195 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 232
>gi|149392733|gb|ABR26169.1| chlorophyll a-b binding protein [Oryza sativa Indica Group]
Length = 144
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 47 MGAVEGYRIAGGPLGEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 106
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 107 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 144
>gi|115779|sp|P12471.1|CB21_SOYBN RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor
gi|169933|gb|AAA33949.1| chlorophyll a/b-binding protein precursor, partial [Glycine max]
Length = 245
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPL LADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 148 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLALADDPEAFAELKVKEIKNGRLAMFSMFGF 207
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLA+PVNNNAWAYATNFVPGK
Sbjct: 208 FVQAIVTGKGPLENLADHLAEPVNNNAWAYATNFVPGK 245
>gi|346987809|gb|AEO51755.1| chloroplast chlorophyll A/B binding protein [Dimocarpus longan]
Length = 263
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLG+VTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGR AMFSMFGF
Sbjct: 166 MGAVEGYRIAGGPLGKVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRSAMFSMFGF 225
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 226 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 263
>gi|326523787|dbj|BAJ93064.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHL+DPVNNNAWA+ATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHLSDPVNNNAWAFATNFVPGK 266
>gi|4512125|gb|AAD21625.1| putative chlorophyll a/b-binding protein [Phalaenopsis hybrid
cultivar]
Length = 277
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGE+TDPLYPG SFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 180 MGAVEGYRIAGGPLGEITDPLYPGNSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 239
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 240 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 277
>gi|693918|gb|AAA80592.1| chlorophyll a/b binding protein [Solanum tuberosum]
Length = 265
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV +PLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVVNPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 265
>gi|133917261|emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [Spinacia oleracea]
Length = 267
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWSFATNFVPGK 267
>gi|38096045|gb|AAR10886.1| chlorophyll a/b binding protein [Trifolium pratense]
Length = 266
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
>gi|556367|gb|AAA50310.1| light-harvesting chlorophyll a/b-binding protein [Prunus persica]
Length = 267
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/98 (93%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGE+TDPLYPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRVAGGPLGEITDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 230 FVQAIVTGKGPIENLADHLADPVNNNAWSYATNFVPGK 267
>gi|224114357|ref|XP_002316737.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa]
gi|222859802|gb|EEE97349.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa]
Length = 264
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGE+TDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 167 MGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNF PGK
Sbjct: 227 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFAPGK 264
>gi|224284929|gb|ACN40194.1| unknown [Picea sitchensis]
Length = 274
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/98 (94%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGE+TDP+YPGGSFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 177 MGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF 236
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 237 FVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 274
>gi|688315|gb|AAC78690.1| chlorophyll a/b-binding protein [Pinus thunbergii]
Length = 274
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 177 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGF 236
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADPVNNNAWAYATNFVPGK
Sbjct: 237 FVQAIVTGKGPIENLTDHLADPVNNNAWAYATNFVPGK 274
>gi|357132518|ref|XP_003567877.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 1 [Brachypodium distachyon]
gi|357132520|ref|XP_003567878.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 2 [Brachypodium distachyon]
gi|357132522|ref|XP_003567879.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 3 [Brachypodium distachyon]
gi|357132524|ref|XP_003567880.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 4 [Brachypodium distachyon]
gi|357132526|ref|XP_003567881.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 5 [Brachypodium distachyon]
Length = 263
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 166 MGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 225
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 226 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 263
>gi|53793542|dbj|BAD52991.1| a/b-binding protein precursor-like [Oryza sativa Japonica Group]
Length = 98
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/98 (98%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 1 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
>gi|14041685|emb|CAC38830.1| chlorophyll a/b binding protein [Pinus contorta]
Length = 274
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 177 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGF 236
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENLADHLADPV+NNAWAYATNFVPGK
Sbjct: 237 FVQAIVTGKGPIENLADHLADPVSNNAWAYATNFVPGK 274
>gi|115822|sp|P10707.1|CB2D_SOLLC RecName: Full=Chlorophyll a-b binding protein 1D; AltName:
Full=LHCII type I CAB-1D; Short=LHCP
gi|170428|gb|AAA34158.1| chlorophyll a/b-binding protein Cab-1D, partial [Solanum
lycopersicum]
gi|224929|prf||1204205D protein 1D,chlorophyll binding
Length = 116
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 19 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 78
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 79 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 116
>gi|413968456|gb|AFW90565.1| chlorophyll a-b binding protein 3C-like mRNA [Solanum tuberosum]
Length = 233
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 136 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 195
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 196 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 233
>gi|326497177|dbj|BAK02173.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/98 (94%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADH+ADPVNNNAWA+ATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 266
>gi|115781|sp|P27492.1|CB21_TOBAC RecName: Full=Chlorophyll a-b binding protein 16, chloroplastic;
AltName: Full=LHCII type I CAB-16; Short=LHCP; Flags:
Precursor
gi|19819|emb|CAA36955.1| unnamed protein product [Nicotiana tabacum]
Length = 266
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 266
>gi|116778744|gb|ABK20976.1| unknown [Picea sitchensis]
gi|116779697|gb|ABK21395.1| unknown [Picea sitchensis]
gi|116790882|gb|ABK25775.1| unknown [Picea sitchensis]
gi|148908056|gb|ABR17147.1| unknown [Picea sitchensis]
gi|148908517|gb|ABR17370.1| unknown [Picea sitchensis]
gi|224284311|gb|ACN39891.1| unknown [Picea sitchensis]
gi|224284945|gb|ACN40202.1| unknown [Picea sitchensis]
gi|224285575|gb|ACN40506.1| unknown [Picea sitchensis]
gi|224285579|gb|ACN40508.1| unknown [Picea sitchensis]
Length = 274
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/98 (94%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGE+TDP+YPGGSFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 177 MGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF 236
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 237 FVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 274
>gi|224927|prf||1204205B protein 1B,chlorophyll binding
Length = 265
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
>gi|158523323|gb|ABW70800.1| chloroplast light harvesting chlorophyll a/b binding protein
[Populus euphratica]
Length = 263
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSM GF
Sbjct: 166 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMLGF 225
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 226 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 263
>gi|693916|gb|AAA80591.1| chlorophyll a/b binding protein [Solanum tuberosum]
Length = 265
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
>gi|3036944|dbj|BAA25389.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 265
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 265
>gi|115819|sp|P07370.1|CB2B_SOLLC RecName: Full=Chlorophyll a-b binding protein 1B, chloroplastic;
AltName: Full=LHCII type I CAB-1B; Short=LHCP; Flags:
Precursor
gi|170402|gb|AAA34147.1| chlorophyll a/b-binding protein Cab-1B [Solanum lycopersicum]
Length = 265
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
>gi|224381552|gb|ACN41907.1| chlorophyll A/B binding protein [Gardenia jasminoides]
Length = 264
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLAD PEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 167 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADVPEAFAELKVKEIKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 227 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
>gi|467794|emb|CAA47950.1| chlorophyll a/b binding protein [Pinus contorta]
Length = 274
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 177 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGF 236
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENLADHLADPV+NNAWAYATNFVPGK
Sbjct: 237 FVQAIVTGKGPIENLADHLADPVSNNAWAYATNFVPGK 274
>gi|31753114|gb|AAH53854.1| Unknown (protein for IMAGE:5194336), partial [Homo sapiens]
gi|111494016|gb|AAI11385.1| Unknown (protein for IMAGE:5198300), partial [Homo sapiens]
Length = 287
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/98 (94%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 190 MGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 249
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHL+DPVNNNAWA+ATNFVPGK
Sbjct: 250 FVQAIVTGKGPLENLADHLSDPVNNNAWAFATNFVPGK 287
>gi|357118764|ref|XP_003561119.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 1 [Brachypodium distachyon]
gi|357118766|ref|XP_003561120.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 2 [Brachypodium distachyon]
gi|357118768|ref|XP_003561121.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 3 [Brachypodium distachyon]
Length = 266
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/98 (94%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
>gi|218172|dbj|BAA00536.1| type I light-harvesting chlorophyll a/b-binding protein [Oryza
sativa Japonica Group]
gi|227611|prf||1707316A chlorophyll a/b binding protein 1
Length = 265
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGG+FDPLGLADDPEAFAELKVKEIK GRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKKGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|224085884|ref|XP_002307725.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa]
gi|118485884|gb|ABK94788.1| unknown [Populus trichocarpa]
gi|222857174|gb|EEE94721.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa]
Length = 264
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 167 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHL+DPVNNNAWAYATNF PGK
Sbjct: 227 FVQAIVTGKGPLENLADHLSDPVNNNAWAYATNFAPGK 264
>gi|238858956|dbj|BAH70299.1| chlorophyll a/b binding protein [Vicia cinerea]
Length = 266
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/98 (94%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHL+DPVNNNAW+YATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK 266
>gi|326506218|dbj|BAJ86427.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/98 (94%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADH+ DPVNNNAWA+ATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHITDPVNNNAWAFATNFVPGK 266
>gi|242045502|ref|XP_002460622.1| hypothetical protein SORBIDRAFT_02g032040 [Sorghum bicolor]
gi|241923999|gb|EER97143.1| hypothetical protein SORBIDRAFT_02g032040 [Sorghum bicolor]
Length = 262
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/97 (97%), Positives = 96/97 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 165 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 224
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG
Sbjct: 225 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 261
>gi|414881719|tpg|DAA58850.1| TPA: chlorophyll a-b binding protein 48, Precursor [Zea mays]
Length = 264
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 167 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENLADHL DPVNNNAWAYATNFVPGK
Sbjct: 227 FVQAIVTGKGPIENLADHLTDPVNNNAWAYATNFVPGK 264
>gi|2196772|gb|AAB61237.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
Length = 267
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/98 (94%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYR+AGGPLGEVTDPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNF PGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFAPGK 267
>gi|170409|gb|AAA34150.1| chlorophyll a/b-binding protein Cab-1A, partial [Solanum
lycopersicum]
gi|170414|gb|AAA34152.1| chlorophyll a/b-binding protein Cab-1C, partial [Solanum
lycopersicum]
Length = 116
Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 19 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 78
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 79 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 116
>gi|115774|sp|P04779.1|CB21_PETSP RecName: Full=Chlorophyll a-b binding protein 13, chloroplastic;
AltName: Full=LHCII type I CAB-13; Short=LHCP; Flags:
Precursor
gi|20471|emb|CAA26210.1| unnamed protein product [Petunia sp.]
Length = 266
Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAEL+VKEIKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
>gi|359480215|ref|XP_002273106.2| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
[Vitis vinifera]
Length = 263
Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRI GGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 166 MGAVEGYRIGGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 225
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 226 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 263
>gi|359754901|gb|AEV59640.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis campestris subsp. johannensis]
gi|359754909|gb|AEV59644.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis splendens]
Length = 239
Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 142 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 201
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 202 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 239
>gi|115780|sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor
gi|14240|emb|CAA32526.1| chlorophyll a/b binding protein precursor [Spinacia oleracea]
gi|193783447|emb|CAJ77389.3| major chlorophyll a/b binding protein LHCb1.3 [Spinacia oleracea]
Length = 267
Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAW +ATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWNFATNFVPGK 267
>gi|326499874|dbj|BAJ90772.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/98 (94%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADH+ DPVNNNAWA+ATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHITDPVNNNAWAFATNFVPGK 266
>gi|302566696|gb|ADL41158.1| chloroplast light-harvesting chlorophyll a/b binding protein
[Triticum aestivum]
Length = 266
Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/98 (94%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHL+DPVNNNAWA+ATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHLSDPVNNNAWAFATNFVPGK 266
>gi|12582|emb|CAA48410.1| light harvesting chlorophyll a /b binding protein [Hedera helix]
Length = 193
Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 96 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGF 155
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 156 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 193
>gi|115800|sp|P09756.1|CB23_SOYBN RecName: Full=Chlorophyll a-b binding protein 3, chloroplastic;
AltName: Full=LHCII type I CAB-3; Short=LHCP; Flags:
Precursor
gi|18552|emb|CAA31419.1| chlorophyll a/b binding preprotein (AA - 32 to 231) [Glycine max]
Length = 263
Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 166 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 225
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLA PVNNNAWAYATNFVPGK
Sbjct: 226 FVQAIVTGKGPLENLADHLAGPVNNNAWAYATNFVPGK 263
>gi|326493298|dbj|BAJ85110.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326493328|dbj|BAJ85125.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 91/98 (92%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEVKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADH+ADP+NNNAWA+ATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHIADPINNNAWAFATNFVPGK 266
>gi|357159898|ref|XP_003578592.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
isoform 1 [Brachypodium distachyon]
gi|357159901|ref|XP_003578593.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
isoform 2 [Brachypodium distachyon]
gi|357159904|ref|XP_003578594.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
isoform 3 [Brachypodium distachyon]
gi|357159907|ref|XP_003578595.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
isoform 4 [Brachypodium distachyon]
gi|357159910|ref|XP_003578596.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
isoform 5 [Brachypodium distachyon]
Length = 265
Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 93/98 (94%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHL+DPVNNNAWA+ATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLSDPVNNNAWAFATNFVPGK 265
>gi|326509659|dbj|BAJ87045.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 91/98 (92%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEVKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADH+ADP+NNNAWA+ATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHIADPINNNAWAFATNFVPGK 266
>gi|115817|sp|P15193.1|CB2A_PINSY RecName: Full=Chlorophyll a-b binding protein type 2 member 1A,
chloroplastic; AltName: Full=Chlorophyll a-b binding
protein type II 1A; Short=CAB; AltName: Full=LHCP;
Flags: Precursor
gi|20661|emb|CAA32657.1| unnamed protein product [Pinus sylvestris]
Length = 278
Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 92/98 (93%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYR+AGGPLGEVTDP+YPGG+FDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 181 MGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGF 240
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 FVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 278
>gi|8954293|gb|AAD27879.2|AF139467_1 LHCII type I chlorophyll a/b binding protein [Vigna radiata]
Length = 263
Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFS+FGF
Sbjct: 166 MGAVEGYRIAGGPLGEVTDPTYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSVFGF 225
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 226 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 263
>gi|359754911|gb|AEV59645.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis lambertii]
Length = 237
Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 140 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 199
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 200 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 237
>gi|359754899|gb|AEV59639.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis arctobia]
Length = 239
Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 142 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 201
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 202 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 239
>gi|357159913|ref|XP_003578597.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
isoform 6 [Brachypodium distachyon]
Length = 264
Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 93/98 (94%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 167 MGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHL+DPVNNNAWA+ATNFVPGK
Sbjct: 227 FVQAIVTGKGPLENLADHLSDPVNNNAWAFATNFVPGK 264
>gi|305377030|dbj|BAJ15878.1| chlorophyll a/b binding protein-like protein [Torenia fournieri]
Length = 125
Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/98 (98%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 28 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 87
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLAD LADPVNNNAWAYATNFVPGK
Sbjct: 88 FVQAIVTGKGPLENLADGLADPVNNNAWAYATNFVPGK 125
>gi|217944|dbj|BAA03104.1| light-harvesting chlorophyll a/b-binding protein (LHCP) precursor
[Lactuca sativa]
Length = 266
Score = 195 bits (495), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPV NNAW+YATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHLADPVANNAWSYATNFVPGK 266
>gi|56809379|gb|AAW31511.1| light-harvesting chlorophyll-a/b binding protein Lhcb1 [Pisum
sativum]
Length = 266
Score = 195 bits (495), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 93/98 (94%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHL+DPVNNNAW+YATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK 266
>gi|159138421|gb|ABW89213.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138423|gb|ABW89214.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138425|gb|ABW89215.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138429|gb|ABW89217.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138433|gb|ABW89219.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138437|gb|ABW89221.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138439|gb|ABW89222.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138441|gb|ABW89223.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138443|gb|ABW89224.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138445|gb|ABW89225.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138447|gb|ABW89226.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138451|gb|ABW89228.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138453|gb|ABW89229.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138455|gb|ABW89230.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138457|gb|ABW89231.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
Length = 116
Score = 195 bits (495), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 19 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 78
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPV NNAW+YATNFVPGK
Sbjct: 79 FVQAIVTGKGPLENLADHLADPVANNAWSYATNFVPGK 116
>gi|170404|gb|AAA34148.1| chlorophyll a/b-binding protein Cab-3C [Solanum lycopersicum]
Length = 267
Score = 195 bits (495), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLG ADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGPADDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 267
>gi|115795|sp|P12469.1|CB23_NICPL RecName: Full=Chlorophyll a-b binding protein C, chloroplastic;
AltName: Full=LHCII type I CAB-C; Short=LHCP; Flags:
Precursor
gi|170210|gb|AAA34055.1| chlorophyll a/b-binding protein-C [Nicotiana plumbaginifolia]
Length = 267
Score = 195 bits (495), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AG PLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
>gi|115785|sp|P08963.1|CB22_HORVU RecName: Full=Chlorophyll a-b binding protein 2, chloroplastic;
AltName: Full=LHCII type I CAB-2; Short=LHCP; Flags:
Precursor
gi|18943|emb|CAA31232.1| LHC precursor protein (AA -34 to 230) [Hordeum vulgare]
Length = 264
Score = 195 bits (495), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADD EAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 167 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDAEAFAELKVKEIKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 227 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 264
>gi|115810|sp|P27496.1|CB25_TOBAC RecName: Full=Chlorophyll a-b binding protein 50, chloroplastic;
AltName: Full=LHCII type I CAB-50; Short=LHCP; Flags:
Precursor
gi|19833|emb|CAA36956.1| unnamed protein product [Nicotiana tabacum]
Length = 267
Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/98 (94%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVK IKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKHIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267
>gi|73665920|gb|AAZ79657.1| putative chlorophyll a/b-binding protein [Fagus sylvatica]
Length = 260
Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/97 (96%), Positives = 96/97 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 164 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 223
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGP+ENLADHLADPV NNAWAYATNFVPG
Sbjct: 224 FVQAIVTGKGPIENLADHLADPVTNNAWAYATNFVPG 260
>gi|1657859|gb|AAB18209.1| chlorophyll a/b-binding protein WCAB precursor [Triticum aestivum]
Length = 266
Score = 194 bits (494), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 92/98 (93%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGE+ DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADH+ADPVNNNAWA+ATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 266
>gi|224284623|gb|ACN40044.1| unknown [Picea sitchensis]
Length = 278
Score = 194 bits (494), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 92/98 (93%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYR+AGGPLGEVTDP+YPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 181 MGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF 240
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 278
>gi|116782449|gb|ABK22510.1| unknown [Picea sitchensis]
gi|116782855|gb|ABK22691.1| unknown [Picea sitchensis]
gi|116791804|gb|ABK26115.1| unknown [Picea sitchensis]
gi|148908337|gb|ABR17282.1| unknown [Picea sitchensis]
Length = 278
Score = 194 bits (494), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 92/98 (93%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYR+AGGPLGEVTDP+YPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 181 MGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF 240
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 278
>gi|226502080|ref|NP_001147639.1| chlorophyll a-b binding protein 1, chloroplastic precursor [Zea
mays]
gi|195612774|gb|ACG28217.1| chlorophyll a-b binding protein 2 [Zea mays]
Length = 262
Score = 194 bits (494), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/97 (96%), Positives = 96/97 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 165 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 224
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGPLENLADH+ADPVNNNAWAYATNFVPG
Sbjct: 225 FVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPG 261
>gi|326520097|dbj|BAK03973.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 194 bits (494), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/98 (94%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGE+ DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
>gi|170421|gb|AAA34155.1| chlorophyll a/b-binding protein Cab-3A, partial [Solanum
lycopersicum]
gi|170426|gb|AAA34157.1| chlorophyll a/b-binding protein Cab-3B, partial [Solanum
lycopersicum]
Length = 116
Score = 194 bits (494), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 19 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 78
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADH+ADPVNNNAWA+ATNFVPGK
Sbjct: 79 FVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 116
>gi|148514659|gb|ABQ81857.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 265
Score = 194 bits (494), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTG GP+ENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGNGPIENLADHLADPVNNNAWAYATNFVPGK 265
>gi|162461878|ref|NP_001105427.1| light harvesting chlorophyll a /b binding protein [Zea mays]
gi|22230|emb|CAA37474.1| light harvesting chlorophyll a /b binding protein [Zea mays]
Length = 265
Score = 194 bits (494), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+K GRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKKGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADH+ADPVNNNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPGK 265
>gi|349443|gb|AAA60965.1| light-harvesting chlorophyll a/b binding protein of photosystem II
[Ginkgo biloba]
Length = 270
Score = 194 bits (494), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 92/98 (93%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGE+TDP+YPGGSFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 173 MGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF 232
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 233 FVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 270
>gi|169197|gb|AAA33702.1| Major Cab protein [Petunia x hybrida]
Length = 125
Score = 194 bits (494), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 28 MGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 87
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 88 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 125
>gi|115771|sp|P12329.1|CB21_MAIZE RecName: Full=Chlorophyll a-b binding protein 1, chloroplastic;
AltName: Full=LHCII type I CAB-1; Short=LHCP; Flags:
Precursor
gi|22224|emb|CAA32900.1| unnamed protein product [Zea mays]
gi|194699340|gb|ACF83754.1| unknown [Zea mays]
gi|195607416|gb|ACG25538.1| chlorophyll a-b binding protein 2 [Zea mays]
gi|195613460|gb|ACG28560.1| chlorophyll a-b binding protein 2 [Zea mays]
gi|414886622|tpg|DAA62636.1| TPA: light harvesting chlorophyll a/b binding protein2 [Zea mays]
Length = 262
Score = 194 bits (494), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/97 (96%), Positives = 96/97 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 165 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 224
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGPLENLADH+ADPVNNNAWAYATNFVPG
Sbjct: 225 FVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPG 261
>gi|326510047|dbj|BAJ87240.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 194 bits (494), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/98 (94%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADH+ DPVNNNAWA+ATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHIVDPVNNNAWAFATNFVPGK 266
>gi|357152998|ref|XP_003576305.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
isoform 1 [Brachypodium distachyon]
gi|357153000|ref|XP_003576306.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
isoform 2 [Brachypodium distachyon]
gi|357153003|ref|XP_003576307.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
isoform 3 [Brachypodium distachyon]
Length = 266
Score = 194 bits (494), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/98 (94%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEVKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADH+ DPVNNNAWA+ATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHITDPVNNNAWAFATNFVPGK 266
>gi|375152106|gb|AFA36511.1| light harvesting chlorophyll a/b-binding protein Lhcb1, partial
[Lolium perenne]
Length = 155
Score = 194 bits (493), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/98 (94%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 58 MGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 117
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 118 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 155
>gi|242045514|ref|XP_002460628.1| hypothetical protein SORBIDRAFT_02g032090 [Sorghum bicolor]
gi|241924005|gb|EER97149.1| hypothetical protein SORBIDRAFT_02g032090 [Sorghum bicolor]
Length = 160
Score = 194 bits (493), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 63 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 122
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG
Sbjct: 123 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGN 160
>gi|285804077|gb|ADC35579.1| chloroplast chlorophyll a/b binding protein [Lycoris radiata]
Length = 265
Score = 194 bits (493), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLAD LADPVNNNAW YATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADPLADPVNNNAWPYATNFVPGK 265
>gi|20178|emb|CAA32108.1| chlorophyll a/b-binding preprotein (AA -31 to 235) [Oryza sativa]
Length = 266
Score = 194 bits (493), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGG+FDPLGLADDPEA AELKVK+IKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRIAGGPLGEVVDPLYPGGAFDPLGLADDPEACAELKVKKIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 266
>gi|357118770|ref|XP_003561122.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 4 [Brachypodium distachyon]
Length = 233
Score = 194 bits (493), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 93/98 (94%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 136 MGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 195
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 196 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 233
>gi|671737|emb|CAA52749.1| Chloropyll a/b binding protein [Amaranthus hypochondriacus]
Length = 186
Score = 194 bits (493), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDP+AFAELKVKEIKNG LAMFSMFGF
Sbjct: 89 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPDAFAELKVKEIKNGMLAMFSMFGF 148
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 149 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 186
>gi|607150|emb|CAA57408.1| light harvesting chlorophyll a /b-binding protein Lhcb1*2-1 [Picea
abies]
Length = 274
Score = 194 bits (493), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 92/98 (93%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGE+TDP+YPGGSFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 177 MGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF 236
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENLADHLADPV NNAWAYATNFVPGK
Sbjct: 237 FVQAIVTGKGPIENLADHLADPVTNNAWAYATNFVPGK 274
>gi|607152|emb|CAA57409.1| light harvesting chlorophyll a /b-binding protein Lhcb1*2-2 [Picea
abies]
Length = 275
Score = 194 bits (493), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 92/98 (93%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGE+TDP+YPGGSFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 178 MGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF 237
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENLADHLADPV NNAWAYATNFVPGK
Sbjct: 238 FVQAIVTGKGPIENLADHLADPVTNNAWAYATNFVPGK 275
>gi|47168888|pdb|1RWT|A Chain A, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168889|pdb|1RWT|B Chain B, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168890|pdb|1RWT|C Chain C, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168891|pdb|1RWT|D Chain D, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168892|pdb|1RWT|E Chain E, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168893|pdb|1RWT|F Chain F, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168894|pdb|1RWT|G Chain G, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168895|pdb|1RWT|H Chain H, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168896|pdb|1RWT|I Chain I, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168897|pdb|1RWT|J Chain J, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
Length = 232
Score = 194 bits (493), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 135 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 194
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAW +ATNFVPGK
Sbjct: 195 FVQAIVTGKGPLENLADHLADPVNNNAWNFATNFVPGK 232
>gi|47026929|gb|AAT08685.1| chloroplast chlorophyll a/b-binding protein [Hyacinthus orientalis]
Length = 156
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAM SMFGF
Sbjct: 59 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMLSMFGF 118
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 119 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 156
>gi|223974123|gb|ACN31249.1| unknown [Zea mays]
Length = 233
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/97 (96%), Positives = 96/97 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 136 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 195
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGPLENLADH+ADPVNNNAWAYATNFVPG
Sbjct: 196 FVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPG 232
>gi|359754907|gb|AEV59643.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis splendens]
Length = 236
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/97 (96%), Positives = 96/97 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 140 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 199
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPG
Sbjct: 200 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 236
>gi|87621681|gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pachysandra
terminalis]
Length = 267
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 95/98 (96%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRIAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAY TNFV GK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWAYPTNFVSGK 267
>gi|122831060|gb|ABM66819.1| chloroplast light-harvesting chlorophyll a/b binding protein
[Bambusa oldhamii]
Length = 265
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 95/98 (96%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAY NFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAYVPNFVPGK 265
>gi|2196774|gb|AAB61238.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
Length = 267
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/98 (93%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAIEGYRVAGGPLGEVIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNF PGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFAPGK 267
>gi|262410738|gb|ACY66805.1| chlorophyll a/b-binding protein [Pinus massoniana]
Length = 274
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/98 (93%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRL MFSMFGF
Sbjct: 177 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLTMFSMFGF 236
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+E+LADHLADPVNNNAWAY TNFVPGK
Sbjct: 237 FVQAIVTGKGPIEDLADHLADPVNNNAWAYGTNFVPGK 274
>gi|159138427|gb|ABW89216.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138431|gb|ABW89218.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138435|gb|ABW89220.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
Length = 116
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 95/98 (96%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 19 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 78
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPV NNAW+YATNFVPG
Sbjct: 79 FVQAIVTGKGPLENLADHLADPVANNAWSYATNFVPGN 116
>gi|169201|gb|AAA33704.1| Major Cab protein [Petunia x hybrida]
Length = 129
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/96 (96%), Positives = 95/96 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 34 MGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 93
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVP
Sbjct: 94 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVP 129
>gi|317454924|gb|ADV19258.1| chlorophyll a/b-binding protein-like protein [Helleborus
orientalis]
Length = 232
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 135 MGAVEGYRIAGGPLGEVEDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 194
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FV AIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 195 FVXAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 232
>gi|162463409|ref|NP_001105545.1| chlorophyll a-b binding protein M9, chloroplastic precursor [Zea
mays]
gi|115815|sp|P27497.1|CB29_MAIZE RecName: Full=Chlorophyll a-b binding protein M9, chloroplastic;
AltName: Full=LHCII type I CAB-M9; Short=LHCP; Flags:
Precursor
gi|22355|emb|CAA39376.1| light-harvesting chlorophyll a/b binding protein [Zea mays]
Length = 265
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/98 (92%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYR+AGGPLGEV DPLYPGG+FDPLGLADDPEAFA++KVKE+KNGRLAMFSMFGF
Sbjct: 168 MGAIEGYRVAGGPLGEVVDPLYPGGTFDPLGLADDPEAFADVKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|227139|prf||1615137B chlorophyll a/b binding protein P27
Length = 233
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/98 (92%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYR+AGGPLGEVTDP+YPGG+FDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 136 MGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGF 195
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENLADH+ADPVNNNAWAYATNFVPGK
Sbjct: 196 FVQAIVTGKGPIENLADHIADPVNNNAWAYATNFVPGK 233
>gi|326488085|dbj|BAJ89881.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/98 (92%), Positives = 95/98 (96%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENL DH+ DPVNNNAWA+ATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLGDHITDPVNNNAWAFATNFVPGK 266
>gi|224284588|gb|ACN40027.1| unknown [Picea sitchensis]
Length = 278
Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/98 (92%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYR+AGGPLGEVTDP+YPGG+FDPLG ADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 181 MGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGWADDPDAFAELKVKELKNGRLAMFSMFGF 240
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 278
>gi|159138449|gb|ABW89227.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
Length = 116
Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 95/98 (96%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDP AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 19 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPXAFAELKVKEIKNGRLAMFSMFGF 78
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPV NNAW+YATNFVPGK
Sbjct: 79 FVQAIVTGKGPLENLADHLADPVANNAWSYATNFVPGK 116
>gi|116785761|gb|ABK23849.1| unknown [Picea sitchensis]
Length = 278
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/98 (92%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYR+AGGPLGEVTDP+YPGG+FDPLG ADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 181 MGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGWADDPDAFAELKVKELKNGRLAMFSMFGF 240
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 278
>gi|168019112|ref|XP_001762089.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686806|gb|EDQ73193.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/97 (93%), Positives = 95/97 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEVTDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 166 MGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 225
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGPLENL+DHLADPV NNAWAYATNFVPG
Sbjct: 226 FVQAIVTGKGPLENLSDHLADPVANNAWAYATNFVPG 262
>gi|116791684|gb|ABK26071.1| unknown [Picea sitchensis]
gi|148908641|gb|ABR17429.1| unknown [Picea sitchensis]
Length = 278
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/98 (92%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYR+AGGPLGEVTDP+YPGG+FDPLG ADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 181 MGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGWADDPDAFAELKVKELKNGRLAMFSMFGF 240
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 278
>gi|115791|sp|P09755.1|CB22_SOYBN RecName: Full=Chlorophyll a-b binding protein 2, chloroplastic;
AltName: Full=LHCII type I CAB-2; Short=LHCP; Flags:
Precursor
gi|18548|emb|CAA31418.1| chlorophyll a/b binding preprotein (AA -33 to 223) [Glycine max]
Length = 256
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/98 (93%), Positives = 94/98 (95%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEA AELKVKE+KNGRLAMFSMFGF
Sbjct: 159 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEALAELKVKELKNGRLAMFSMFGF 218
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYAT PGK
Sbjct: 219 FVQAIVTGKGPLENLADHLADPVNNNAWAYATKLCPGK 256
>gi|607148|emb|CAA57407.1| light harvesting chlorophyll a /b-binding protein Lhcb1*1 [Picea
abies]
Length = 278
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/98 (92%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYR+AGGPLGEVTDP+YPGG+FDPLG ADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 181 MGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGWADDPDAFAELKVKELKNGRLAMFSMFGF 240
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 278
>gi|115818|sp|P24006.1|CB2A_PYRPY RecName: Full=Chlorophyll a-b binding protein 1A, chloroplastic;
AltName: Full=LHCII type II CAB-1A; Short=LHCP; Flags:
Precursor
gi|218019|dbj|BAA00449.1| light harvesting a/b binding protein [Pyrus pyrifolia var. culta]
Length = 278
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/98 (91%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYR+AGGPLGEVTDP+YPGG+FDPLGLADDP+AFA++KVKEIKNGRLAMFSMFGF
Sbjct: 181 MGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFADVKVKEIKNGRLAMFSMFGF 240
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 FVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 278
>gi|357496387|ref|XP_003618482.1| Chlorophyll a/b-binding protein [Medicago truncatula]
gi|355493497|gb|AES74700.1| Chlorophyll a/b-binding protein [Medicago truncatula]
Length = 265
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/98 (93%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPL+NLADH+ADPVNNNAWA+ATNFVPGK
Sbjct: 228 FVQAIVTGKGPLKNLADHIADPVNNNAWAFATNFVPGK 265
>gi|116781997|gb|ABK22330.1| unknown [Picea sitchensis]
Length = 278
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/98 (92%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYR+AGGPLGEVTDP+YPGG+FDPLG ADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 181 MGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGWADDPDAFAELKVKELKNGRLAMFSMFGF 240
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 278
>gi|115807|sp|P12470.1|CB25_NICPL RecName: Full=Chlorophyll a-b binding protein E, chloroplastic;
AltName: Full=LHCII type I CAB-E; Short=LHCP; Flags:
Precursor
gi|170212|gb|AAA34056.1| chlorophyll a/b-binding protein-E [Nicotiana plumbaginifolia]
Length = 266
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/98 (93%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AG PLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQA+VTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 229 FVQALVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 266
>gi|116784226|gb|ABK23263.1| unknown [Picea sitchensis]
gi|116792001|gb|ABK26194.1| unknown [Picea sitchensis]
gi|224285000|gb|ACN40229.1| unknown [Picea sitchensis]
gi|224285305|gb|ACN40377.1| unknown [Picea sitchensis]
Length = 278
Score = 192 bits (488), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/98 (92%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYR+AGGPLGEVTDP+YPGG+FDPLG ADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 181 MGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGWADDPDAFAELKVKELKNGRLAMFSMFGF 240
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 278
>gi|2645999|gb|AAB87573.1| chlorophyll a/b binding protein of LHCII type I precursor [Panax
ginseng]
Length = 266
Score = 192 bits (488), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLAD LADPVNNNAWAYATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADPLADPVNNNAWAYATNFVPGK 266
>gi|6716783|gb|AAF26741.1|AF220527_1 chlorophyll a/b binding protein precursor [Euphorbia esula]
Length = 268
Score = 192 bits (487), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 93/98 (94%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 171 MGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 230
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHL DPVNNNAWA+ATNFVPGK
Sbjct: 231 FVQAIVTGKGPLENLADHLFDPVNNNAWAFATNFVPGK 268
>gi|169199|gb|AAA33703.1| Major Cab protein [Petunia x hybrida]
Length = 136
Score = 192 bits (487), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 93/98 (94%), Positives = 95/98 (96%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPL PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 39 MGAVEGYRVAGGPLGEVIDPLCPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 98
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP ENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 99 FVQAIVTGKGPFENLADHLADPVNNNAWSYATNFVPGK 136
>gi|1661160|gb|AAB18404.1| chlorophyll a/b binding protein [Oryza sativa Indica Group]
Length = 265
Score = 192 bits (487), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/98 (93%), Positives = 94/98 (95%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGS DPLGLADDPEAFAELKVKEIKNGRLAM SMFGF
Sbjct: 168 MGAVEGYRVAGGPLGEVVDPLYPGGSLDPLGLADDPEAFAELKVKEIKNGRLAMLSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLEN+ DHLADPVNNNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENITDHLADPVNNNAWAYATNFVPGK 265
>gi|167997433|ref|XP_001751423.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697404|gb|EDQ83740.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 244
Score = 191 bits (486), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 90/97 (92%), Positives = 93/97 (95%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEVTDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 147 MGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 206
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGPLENL DHLADPV NNAWAYATNF PG
Sbjct: 207 FVQAIVTGKGPLENLNDHLADPVANNAWAYATNFTPG 243
>gi|357497757|ref|XP_003619167.1| Chlorophyll a-b binding protein 3C-like protein [Medicago
truncatula]
gi|355494182|gb|AES75385.1| Chlorophyll a-b binding protein 3C-like protein [Medicago
truncatula]
Length = 229
Score = 191 bits (486), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 95/98 (96%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAF ELKVKEIKNGRLAMFSMFGF
Sbjct: 132 MGAVEGYRIAGGPLGEVIDPLYPGGSFDPLGLADDPEAFVELKVKEIKNGRLAMFSMFGF 191
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFV GK
Sbjct: 192 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVLGK 229
>gi|1165248|gb|AAA85589.1| chlorophyll a/b binding protein of PS II, partial [Picea abies]
Length = 131
Score = 191 bits (486), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/98 (92%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYR+AGGPLGEVTDP+YPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 34 MGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF 93
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPL NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 94 FVQAIVTGKGPLXNLADHLADPVNNNAWAYATNFVPGK 131
>gi|359754905|gb|AEV59642.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis maydelliana]
Length = 238
Score = 191 bits (485), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 93/97 (95%), Positives = 95/97 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAE KVKE+KNGRLAMFSMFGF
Sbjct: 142 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAEXKVKELKNGRLAMFSMFGF 201
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPG
Sbjct: 202 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 238
>gi|115786|sp|P06671.1|CB22_MAIZE RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor
gi|22357|emb|CAA68451.1| LHCP [Zea mays]
Length = 265
Score = 191 bits (484), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 92/98 (93%), Positives = 94/98 (95%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAF ELKVKE+K GRLAM SMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFGELKVKELKKGRLAMLSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADH+ADPVNNNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPGK 265
>gi|168009155|ref|XP_001757271.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691394|gb|EDQ77756.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 265
Score = 191 bits (484), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 90/97 (92%), Positives = 94/97 (96%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGE+TDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRVAGGPLGEITDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGPLENL DHLADPV NNAWAYATNFVPG
Sbjct: 228 FVQAIVTGKGPLENLNDHLADPVANNAWAYATNFVPG 264
>gi|133917263|emb|CAJ77391.1| major chlorophyll a/b binding protein LHCb1.1 [Spinacia oleracea]
gi|283549607|emb|CAX64457.1| major chlorophyll a/b binding protein LHCb1.1 precursor [Spinacia
oleracea]
Length = 267
Score = 191 bits (484), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 92/97 (94%), Positives = 95/97 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGPLENLADHLADPVNNNAW +ATNFVPG
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWNFATNFVPG 266
>gi|146403796|gb|ABQ32304.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Artemisia annua]
Length = 254
Score = 190 bits (483), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 93/98 (94%), Positives = 95/98 (96%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 157 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 216
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLAD LADPV NNAW+YATNFVPGK
Sbjct: 217 FVQAIVTGKGPLENLADRLADPVANNAWSYATNFVPGK 254
>gi|388503040|gb|AFK39586.1| unknown [Medicago truncatula]
Length = 265
Score = 190 bits (483), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 92/98 (93%), Positives = 95/98 (96%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGP GEV DPLYPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPPGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENLADHLADPVNNNAWAYATNF PGK
Sbjct: 228 FVQAIVTGKGPIENLADHLADPVNNNAWAYATNFAPGK 265
>gi|302767620|ref|XP_002967230.1| light-harvesting complex [Selaginella moellendorffii]
gi|300165221|gb|EFJ31829.1| light-harvesting complex [Selaginella moellendorffii]
Length = 263
Score = 190 bits (483), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 91/98 (92%), Positives = 95/98 (96%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 166 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGF 225
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENL+DHLADPV NNAWAYATNF PG
Sbjct: 226 FVQAIVTGKGPLENLSDHLADPVANNAWAYATNFTPGS 263
>gi|168044688|ref|XP_001774812.1| predicted protein [Physcomitrella patens subsp. patens]
gi|41529316|dbj|BAD08519.1| light-harvesting chlorophyll a/b-binding protein 2 [Physcomitrella
patens subsp. patens]
gi|162673836|gb|EDQ60353.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 267
Score = 190 bits (483), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 91/97 (93%), Positives = 94/97 (96%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEVTDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGPLENL DHLADPV NNAWAYATNFVPG
Sbjct: 230 FVQAIVTGKGPLENLNDHLADPVANNAWAYATNFVPG 266
>gi|302754140|ref|XP_002960494.1| light-harvesting complex [Selaginella moellendorffii]
gi|300171433|gb|EFJ38033.1| light-harvesting complex [Selaginella moellendorffii]
Length = 272
Score = 190 bits (482), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 91/98 (92%), Positives = 95/98 (96%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 175 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGF 234
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENL+DHLADPV NNAWAYATNF PG
Sbjct: 235 FVQAIVTGKGPLENLSDHLADPVANNAWAYATNFTPGS 272
>gi|169061|gb|AAA33655.1| chlorophyll a/b-binding protein [Pisum sativum]
Length = 194
Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/98 (93%), Positives = 95/98 (96%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+ PEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 97 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEIPEAFAELKVKELKNGRLAMFSMFGF 156
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENLADHLADPVNNNAWAYATNF PGK
Sbjct: 157 FVQAIVTGKGPIENLADHLADPVNNNAWAYATNFAPGK 194
>gi|168045248|ref|XP_001775090.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168045296|ref|XP_001775114.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673541|gb|EDQ60062.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673565|gb|EDQ60086.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/97 (93%), Positives = 94/97 (96%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEVTDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 166 MGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 225
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGPLENL DHLADPV NNAWAYATNFVPG
Sbjct: 226 FVQAIVTGKGPLENLNDHLADPVANNAWAYATNFVPG 262
>gi|168053792|ref|XP_001779318.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669234|gb|EDQ55825.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/97 (92%), Positives = 93/97 (95%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEVTDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 166 MGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 225
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGPLENL DHLADPV NNAWAYATNF PG
Sbjct: 226 FVQAIVTGKGPLENLNDHLADPVANNAWAYATNFTPG 262
>gi|168018669|ref|XP_001761868.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168018837|ref|XP_001761952.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686923|gb|EDQ73309.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687007|gb|EDQ73393.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 267
Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/97 (92%), Positives = 93/97 (95%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEVTDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGPLENL DHLADPV NNAWAYATNF PG
Sbjct: 230 FVQAIVTGKGPLENLNDHLADPVANNAWAYATNFTPG 266
>gi|47026843|gb|AAT08647.1| chloroplast chlorophyll A-B binding protein 3C [Hyacinthus
orientalis]
Length = 220
Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/95 (96%), Positives = 94/95 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 126 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 185
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFV 95
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFV
Sbjct: 186 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFV 220
>gi|167997791|ref|XP_001751602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697583|gb|EDQ83919.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 267
Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/97 (92%), Positives = 93/97 (95%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEVTDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGPLENL DHLADPV NNAWAYATNF PG
Sbjct: 230 FVQAIVTGKGPLENLNDHLADPVANNAWAYATNFTPG 266
>gi|168043963|ref|XP_001774452.1| predicted protein [Physcomitrella patens subsp. patens]
gi|4757371|dbj|BAA77273.1| chlorophyll a/b-binding protein precursor [Physcomitrella patens]
gi|162674164|gb|EDQ60676.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 268
Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/97 (92%), Positives = 94/97 (96%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLG+VTDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 171 MGAVEGYRVAGGPLGDVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 230
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGPLENL DHLADPV NNAWAYATNFVPG
Sbjct: 231 FVQAIVTGKGPLENLNDHLADPVANNAWAYATNFVPG 267
>gi|167997439|ref|XP_001751426.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168066892|ref|XP_001785364.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168066898|ref|XP_001785367.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663036|gb|EDQ49825.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663039|gb|EDQ49828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697407|gb|EDQ83743.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 267
Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/97 (92%), Positives = 93/97 (95%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEVTDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGPLENL DHLADPV NNAWAYATNF PG
Sbjct: 230 FVQAIVTGKGPLENLNDHLADPVANNAWAYATNFTPG 266
>gi|167997305|ref|XP_001751359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697340|gb|EDQ83676.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 267
Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/97 (92%), Positives = 93/97 (95%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEVTDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGPLENL DHLADPV NNAWAYATNF PG
Sbjct: 230 FVQAIVTGKGPLENLNDHLADPVANNAWAYATNFTPG 266
>gi|298573438|gb|ADI88502.1| protoporphyrin IX magnesium chelatase [Pteris vittata]
Length = 266
Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/98 (91%), Positives = 94/98 (95%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRVAGGPLGEVEDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL+DHLADP NNAWAYATNF PGK
Sbjct: 229 FVQAIVTGKGPIENLSDHLADPTVNNAWAYATNFTPGK 266
>gi|14423661|sp|P92919.1|CB23_APIGR RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Allergen=Api g 3; Flags: Precursor
gi|1769849|emb|CAA99993.1| chlorophyll a/b binding protein [Apium graveolens]
Length = 264
Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/98 (91%), Positives = 95/98 (96%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGE+ DPLYPGGSFDPLGLA+DPE AELKVKE+KNGRLAMFSMFGF
Sbjct: 167 MGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLAEDPERSAELKVKELKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 227 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 264
>gi|168003066|ref|XP_001754234.1| predicted protein [Physcomitrella patens subsp. patens]
gi|41529314|dbj|BAD08518.1| light-harvesting chlorophyll a/b-binding protein 1 [Physcomitrella
patens subsp. patens]
gi|162694788|gb|EDQ81135.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 267
Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/97 (92%), Positives = 94/97 (96%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLG+VTDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRVAGGPLGDVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGPLENL DHLADPV NNAWAYATNFVPG
Sbjct: 230 FVQAIVTGKGPLENLNDHLADPVANNAWAYATNFVPG 266
>gi|224034127|gb|ACN36139.1| unknown [Zea mays]
Length = 191
Score = 189 bits (479), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/98 (91%), Positives = 93/98 (94%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 63 MGAIEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 122
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATN P
Sbjct: 123 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNLCPAS 160
>gi|168003213|ref|XP_001754307.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694409|gb|EDQ80757.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 267
Score = 188 bits (478), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/97 (92%), Positives = 94/97 (96%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLG+VTDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRVAGGPLGDVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGPLENL DHLADPV NNAWAYATNFVPG
Sbjct: 230 FVQAIVTGKGPLENLNDHLADPVANNAWAYATNFVPG 266
>gi|115799|sp|P15195.1|CB23_POLMU RecName: Full=Chlorophyll a-b binding protein type 1 member F3,
chloroplastic; AltName: Full=Chlorophyll a-b binding
protein type I F3; Short=CAB-F3; AltName: Full=LHCP;
Flags: Precursor
gi|169440|gb|AAA68425.1| chlorophyll a/b-binding protein F3 [Polystichum munitum]
Length = 265
Score = 188 bits (478), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/98 (90%), Positives = 94/98 (95%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL+DHLADP NNAWAYATNF PGK
Sbjct: 228 FVQAIVTGKGPIENLSDHLADPAVNNAWAYATNFTPGK 265
>gi|168025870|ref|XP_001765456.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683306|gb|EDQ69717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 266
Score = 188 bits (478), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/97 (91%), Positives = 93/97 (95%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLG+VTDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRVAGGPLGDVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGPLENL DHLADPV NNAWAYATNF PG
Sbjct: 229 FVQAIVTGKGPLENLNDHLADPVANNAWAYATNFTPG 265
>gi|115773|sp|P04159.1|CB21_PEA RecName: Full=Chlorophyll a-b binding protein AB96; AltName:
Full=LHCII type I CAB-AB96; Short=LHCP; AltName:
Full=Major 15
gi|169051|gb|AAA33650.1| polypeptide 15 precursor, partial [Pisum sativum]
Length = 228
Score = 188 bits (477), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 92/98 (93%), Positives = 95/98 (96%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+ PEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 131 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEVPEAFAELKVKELKNGRLAMFSMFGF 190
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FV AIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 191 FVPAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 228
>gi|110224742|emb|CAL07971.1| chlorophyll a/b-binding protein, photosystem II [Platanus x
acerifolia]
Length = 235
Score = 188 bits (477), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 92/95 (96%), Positives = 94/95 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLG+VT PLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 141 MGAVEGYRVAGGPLGKVTGPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 200
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFV 95
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFV
Sbjct: 201 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFV 235
>gi|63003222|dbj|BAD97888.1| CAB homologue1 [Lemna paucicostata]
Length = 231
Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 91/94 (96%), Positives = 93/94 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 138 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 197
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 94
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNF
Sbjct: 198 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 231
>gi|168006129|ref|XP_001755762.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693081|gb|EDQ79435.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 265
Score = 187 bits (476), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 89/97 (91%), Positives = 93/97 (95%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLG+VTDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRVAGGPLGDVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGPLENL DHLADPV NNAWAYATNF PG
Sbjct: 228 FVQAIVTGKGPLENLNDHLADPVANNAWAYATNFTPG 264
>gi|357496383|ref|XP_003618480.1| Chlorophyll a/b binding protein [Medicago truncatula]
gi|355493495|gb|AES74698.1| Chlorophyll a/b binding protein [Medicago truncatula]
Length = 180
Score = 187 bits (476), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 91/98 (92%), Positives = 95/98 (96%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIA GPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 83 MGAVEGYRIADGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 142
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVT KGPLENLADH+ADPVN+NAWA+ATNFVPGK
Sbjct: 143 FVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPGK 180
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/45 (91%), Positives = 43/45 (95%)
Query: 54 MFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
MFSMFGFFVQAIVTGKGPLENLADH+ DPVNNNAWA+ATNFVPG
Sbjct: 1 MFSMFGFFVQAIVTGKGPLENLADHITDPVNNNAWAFATNFVPGN 45
>gi|359754903|gb|AEV59641.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis maydelliana]
Length = 235
Score = 187 bits (476), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 91/94 (96%), Positives = 93/94 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 142 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 201
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 94
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNF
Sbjct: 202 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 235
>gi|115789|sp|P04780.1|CB22_PETSP RecName: Full=Chlorophyll a-b binding protein 22L, chloroplastic;
AltName: Full=LHCII type I CAB-22L; Short=LHCP; Flags:
Precursor
gi|20475|emb|CAA26212.1| unnamed protein product [Petunia sp.]
Length = 267
Score = 187 bits (475), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 89/98 (90%), Positives = 93/98 (94%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLG V DPLYPGGSFDPLGLA+DPEAFAELKVKE KNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRVAGGPLGVVVDPLYPGGSFDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
F+QAIVTGKGPLENLADHL DPVNNNAW+YATNFVP K
Sbjct: 230 FIQAIVTGKGPLENLADHLVDPVNNNAWSYATNFVPRK 267
>gi|115782|sp|P04784.1|CB21_WHEAT RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor
gi|170674|gb|AAA34260.1| chlorophyll a/b-binding protein precursor [Triticum aestivum]
Length = 266
Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/98 (90%), Positives = 94/98 (95%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGE+ DPLYPGGSFDPLGLA+ P+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLE+LADH+ADPVNNNAW ATNFVPGK
Sbjct: 229 FVQAIVTGKGPLEDLADHIADPVNNNAWLIATNFVPGK 266
>gi|116779839|gb|ABK21446.1| unknown [Picea sitchensis]
Length = 266
Score = 184 bits (466), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 87/98 (88%), Positives = 92/98 (93%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 169 MGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADP NNNAWAYATNFVPGK
Sbjct: 229 FVQAIVTGKGPIENLFDHLADPANNNAWAYATNFVPGK 266
>gi|20939|emb|CAA43907.1| chlorophyll a/b-binding protein [Pinus thunbergii]
Length = 266
Score = 184 bits (466), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 88/98 (89%), Positives = 92/98 (93%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 229 FVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 266
>gi|115778|sp|P13851.1|CB21_SINAL RecName: Full=Chlorophyll a-b binding protein 1, chloroplastic;
AltName: Full=LHCII type I CAB-1; Short=LHCP; Flags:
Precursor
gi|21138|emb|CAA34459.1| unnamed protein product [Sinapis alba]
gi|21140|emb|CAA33903.1| chlorophyll a/b-binding polypeptide [Sinapis alba]
Length = 266
Score = 184 bits (466), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 92/99 (92%), Positives = 94/99 (94%), Gaps = 1/99 (1%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MGAVEGYR+AG GPLGE D LYPGGSFDPLGLA DPEAFAELKVKEIKNGRLAMFSMFG
Sbjct: 168 MGAVEGYRVAGEGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFG 227
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 228 FFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
>gi|115770|sp|P12328.1|CB21_LEMGI RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|168290|gb|AAA33392.1| chlorophyll a/b apoprotein [Lemna gibba]
Length = 264
Score = 184 bits (466), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 87/98 (88%), Positives = 93/98 (94%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 167 MGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENLADH+ADPV NNAWA+ATNFVPGK
Sbjct: 227 FVQAIVTGKGPIENLADHIADPVANNAWAFATNFVPGK 264
>gi|116782134|gb|ABK22382.1| unknown [Picea sitchensis]
gi|116783875|gb|ABK23122.1| unknown [Picea sitchensis]
gi|116792700|gb|ABK26462.1| unknown [Picea sitchensis]
gi|148905950|gb|ABR16136.1| unknown [Picea sitchensis]
gi|224285016|gb|ACN40237.1| unknown [Picea sitchensis]
Length = 266
Score = 184 bits (466), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 87/98 (88%), Positives = 92/98 (93%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 169 MGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADP NNNAWAYATNFVPGK
Sbjct: 229 FVQAIVTGKGPIENLFDHLADPANNNAWAYATNFVPGK 266
>gi|543938|sp|Q00827.1|CB48_MAIZE RecName: Full=Chlorophyll a-b binding protein 48, chloroplastic;
AltName: Full=LHCII type I CAB-48; Short=LHCP; Flags:
Precursor
gi|22228|emb|CAA44888.1| chlorophyll a/b binding protein precursor [Zea mays]
Length = 264
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/98 (90%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGY +AGG LGEV DPLY GGSFDPLGL DDPE FAELKVKEIKNGRLAMFSMFGF
Sbjct: 167 MGAVEGYHVAGGRLGEVVDPLYLGGSFDPLGLGDDPERFAELKVKEIKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENLADHL DPVNNNAWAYATNFVPGK
Sbjct: 227 FVQAIVTGKGPIENLADHLTDPVNNNAWAYATNFVPGK 264
>gi|18266039|gb|AAL67432.1|AF458406_1 chlorophyll a/b binding protein [Brassica oleracea]
Length = 266
Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/99 (92%), Positives = 94/99 (94%), Gaps = 1/99 (1%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MGAVEGYR+AG GPLGE D LYPGGSFDPLGLA DPEAFAELKVKEIKNGRLAMFSMFG
Sbjct: 168 MGAVEGYRVAGEGPLGEAEDLLYPGGSFDPLGLAADPEAFAELKVKEIKNGRLAMFSMFG 227
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 228 FFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
>gi|1262847|gb|AAB19040.1| type 2 light-harvesting chlorophyll a/b-binding polypeptide,
partial [Pinus palustris]
Length = 246
Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 88/98 (89%), Positives = 92/98 (93%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 149 MGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 208
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 209 FVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 246
>gi|21592428|gb|AAM64379.1| putative photosystem II type I chlorophyll a b binding protein
[Arabidopsis thaliana]
Length = 266
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/99 (91%), Positives = 94/99 (94%), Gaps = 1/99 (1%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MGAVEGYR+AG GPLGE D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFG
Sbjct: 168 MGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFG 227
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 228 FFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
>gi|18403549|ref|NP_565787.1| light-harvesting complex II chlorophyll a/b binding protein 1
[Arabidopsis thaliana]
gi|11908034|gb|AAG41446.1|AF326864_1 putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|12642854|gb|AAK00369.1|AF339687_1 putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|16366|emb|CAA45789.1| photosystem II type I chlorophyll a /b binding protein [Arabidopsis
thaliana]
gi|3128229|gb|AAC26709.1| putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|20197164|gb|AAM14951.1| putative photosystem II type I chlorophyll a b binding protein
[Arabidopsis thaliana]
gi|21539563|gb|AAM53334.1| putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|25083751|gb|AAN72114.1| putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|330253879|gb|AEC08973.1| light-harvesting complex II chlorophyll a/b binding protein 1
[Arabidopsis thaliana]
Length = 266
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/99 (91%), Positives = 94/99 (94%), Gaps = 1/99 (1%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MGAVEGYR+AG GPLGE D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFG
Sbjct: 168 MGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFG 227
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 228 FFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
>gi|974850|emb|CAA61432.1| LHCII type I protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/98 (87%), Positives = 92/98 (93%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGE+ DPLYPGG FDPLGLA+ P+AF LKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRVAGGPLGEIVDPLYPGGRFDPLGLAERPQAFDALKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
VQAIVTGKGPLENLADH+ADPVNNNAWA+ATNFVPGK
Sbjct: 229 LVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 266
>gi|18403546|ref|NP_565786.1| light-harvesting complex II chlorophyll a/b binding protein 1
[Arabidopsis thaliana]
gi|13926260|gb|AAK49602.1|AF372886_1 At2g34420/T31E10.24 [Arabidopsis thaliana]
gi|16226426|gb|AAL16165.1|AF428397_1 At2g34420/T31E10.24 [Arabidopsis thaliana]
gi|16930391|gb|AAL31882.1|AF419548_1 At2g34420/T31E10.24 [Arabidopsis thaliana]
gi|16930467|gb|AAL31919.1|AF419587_1 At2g34420/T31E10.24 [Arabidopsis thaliana]
gi|16364|emb|CAA45790.1| photosystem II type I chlorophyll a /b binding protein [Arabidopsis
thaliana]
gi|3128230|gb|AAC26710.1| photosystem II type I chlorophyll a/b binding protein [Arabidopsis
thaliana]
gi|14517452|gb|AAK62616.1| At2g34420/T31E10.24 [Arabidopsis thaliana]
gi|15027899|gb|AAK76480.1| putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|17473689|gb|AAL38301.1| photosystem II type I chlorophyll a/b binding protein [Arabidopsis
thaliana]
gi|19310503|gb|AAL84985.1| At2g34420/T31E10.24 [Arabidopsis thaliana]
gi|19310521|gb|AAL84994.1| At2g34420/T31E10.24 [Arabidopsis thaliana]
gi|20148517|gb|AAM10149.1| photosystem II type I chlorophyll a/b binding protein [Arabidopsis
thaliana]
gi|20197168|gb|AAM14954.1| photosystem II type I chlorophyll a b binding protein [Arabidopsis
thaliana]
gi|23296426|gb|AAN13114.1| putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|110739111|dbj|BAF01472.1| photosystem II type I chlorophyll a/b binding protein [Arabidopsis
thaliana]
gi|330253878|gb|AEC08972.1| light-harvesting complex II chlorophyll a/b binding protein 1
[Arabidopsis thaliana]
Length = 265
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/99 (91%), Positives = 94/99 (94%), Gaps = 1/99 (1%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MGAVEGYR+AG GPLGE D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFG
Sbjct: 167 MGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFG 226
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 227 FFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
>gi|15220615|ref|NP_174286.1| chlorophyll a-b binding protein 1 [Arabidopsis thaliana]
gi|115783|sp|P04778.1|CB1C_ARATH RecName: Full=Chlorophyll a-b binding protein 1, chloroplastic;
AltName: Full=Chlorophyll a-b protein 140;
Short=CAB-140; AltName: Full=LHCII type I CAB-1; Flags:
Precursor
gi|9972353|gb|AAG10603.1|AC008030_3 Putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|16226883|gb|AAL16289.1|AF428359_1 At1g29930/F1N18_23 [Arabidopsis thaliana]
gi|16376|emb|CAA27543.1| chlorophyll a/b binding protein (LHCP AB 140) [Arabidopsis
thaliana]
gi|15010744|gb|AAK74031.1| At1g29930/F1N18_23 [Arabidopsis thaliana]
gi|15293003|gb|AAK93612.1| putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|16648807|gb|AAL25594.1| At1g29930/F1N18_23 [Arabidopsis thaliana]
gi|20258873|gb|AAM14108.1| putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|332193030|gb|AEE31151.1| chlorophyll a-b binding protein 1 [Arabidopsis thaliana]
Length = 267
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/99 (90%), Positives = 94/99 (94%), Gaps = 1/99 (1%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MGAVEGYR+AG GPLGE D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFG
Sbjct: 169 MGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFG 228
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FFVQAIVTGKGP+ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 229 FFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 267
>gi|109389998|gb|ABG29728.1| chloroplast chlorophyll a/b binding protein [Brassica napus]
Length = 267
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/99 (91%), Positives = 93/99 (93%), Gaps = 1/99 (1%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MGAVEGYR+AG GPLGE D LYPGGSFDPLGLA DPEAFAELKVKEIKNGRLAMFSMFG
Sbjct: 169 MGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFG 228
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FF QAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 229 FFAQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 267
>gi|374412428|gb|AEZ49172.1| chlorophyll a/b binding protein of LHCII type I [Wolffia
australiana]
Length = 264
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/97 (89%), Positives = 92/97 (94%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 167 MGFIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGPLENL+DHLADPV NNAW+YATNFVPG
Sbjct: 227 FVQAIVTGKGPLENLSDHLADPVANNAWSYATNFVPG 263
>gi|116779784|gb|ABK21429.1| unknown [Picea sitchensis]
gi|116782287|gb|ABK22448.1| unknown [Picea sitchensis]
gi|116785934|gb|ABK23914.1| unknown [Picea sitchensis]
gi|116786318|gb|ABK24064.1| unknown [Picea sitchensis]
gi|116791776|gb|ABK26103.1| unknown [Picea sitchensis]
gi|116793629|gb|ABK26818.1| unknown [Picea sitchensis]
gi|148909078|gb|ABR17641.1| unknown [Picea sitchensis]
gi|224284321|gb|ACN39896.1| unknown [Picea sitchensis]
gi|224284480|gb|ACN39974.1| unknown [Picea sitchensis]
gi|224284600|gb|ACN40033.1| unknown [Picea sitchensis]
gi|224285740|gb|ACN40585.1| unknown [Picea sitchensis]
gi|224285871|gb|ACN40649.1| unknown [Picea sitchensis]
Length = 266
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/98 (88%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADP NNAWAYATNFVPGK
Sbjct: 229 FVQAIVTGKGPIENLFDHLADPTANNAWAYATNFVPGK 266
>gi|18397286|ref|NP_564339.1| chlorophyll a-b binding protein 2/3 [Arabidopsis thaliana]
gi|18397288|ref|NP_564340.1| chlorophyll a-b binding protein 2/3 [Arabidopsis thaliana]
gi|317374860|sp|P0CJ48.1|CB1A_ARATH RecName: Full=Chlorophyll a-b binding protein 2, chloroplastic;
AltName: Full=Chlorophyll a-b protein 165;
Short=CAB-165; AltName: Full=LHCII type I CAB-2; Flags:
Precursor
gi|317374942|sp|Q8VZ87.2|CB1B_ARATH RecName: Full=Chlorophyll a-b binding protein 3, chloroplastic;
AltName: Full=Chlorophyll a-b protein 180;
Short=CAB-180; AltName: Full=LHCII type I CAB-3; Flags:
Precursor
gi|9972354|gb|AAG10604.1|AC008030_4 chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|9972355|gb|AAG10605.1|AC008030_5 chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|16368|emb|CAA27540.1| chlorophyll a/b binding protein (LHCP AB 65) [Arabidopsis thaliana]
gi|16372|emb|CAA27541.1| chlorophyll a/b binding protein (LHCP AB 180) [Arabidopsis
thaliana]
gi|15529226|gb|AAK97707.1| At1g29920/F1N18_80 [Arabidopsis thaliana]
gi|15809862|gb|AAL06859.1| At1g29920/F1N18_80 [Arabidopsis thaliana]
gi|16974375|gb|AAL31113.1| At1g29920/F1N18_80 [Arabidopsis thaliana]
gi|17065476|gb|AAL32892.1| chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|20148487|gb|AAM10134.1| chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|21555860|gb|AAM63949.1| photosystem II type I chlorophyll a /b binding protein, putative
[Arabidopsis thaliana]
gi|22135932|gb|AAM91548.1| photosystem II type I chlorophyll a/b binding protein, putative
[Arabidopsis thaliana]
gi|23397170|gb|AAN31868.1| putative photosystem II type I chlorophyll a /b binding protein
[Arabidopsis thaliana]
gi|332193028|gb|AEE31149.1| chlorophyll a-b binding protein 2/3 [Arabidopsis thaliana]
gi|332193029|gb|AEE31150.1| chlorophyll a-b binding protein 2/3 [Arabidopsis thaliana]
Length = 267
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/99 (90%), Positives = 94/99 (94%), Gaps = 1/99 (1%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MGAVEGYR+AG GPLGE D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFG
Sbjct: 169 MGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFG 228
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FFVQAIVTGKGP+ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 229 FFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 267
>gi|116780878|gb|ABK21859.1| unknown [Picea sitchensis]
gi|116780908|gb|ABK21874.1| unknown [Picea sitchensis]
gi|116786305|gb|ABK24058.1| unknown [Picea sitchensis]
gi|116788326|gb|ABK24837.1| unknown [Picea sitchensis]
gi|116791751|gb|ABK26095.1| unknown [Picea sitchensis]
gi|224284118|gb|ACN39796.1| unknown [Picea sitchensis]
gi|224284899|gb|ACN40179.1| unknown [Picea sitchensis]
Length = 266
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/98 (88%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADP NNAWAYATNFVPGK
Sbjct: 229 FVQAIVTGKGPIENLFDHLADPTANNAWAYATNFVPGK 266
>gi|148909129|gb|ABR17665.1| unknown [Picea sitchensis]
Length = 266
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/98 (88%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADP NNAWAYATNFVPGK
Sbjct: 229 FVQAIVTGKGPIENLFDHLADPTANNAWAYATNFVPGK 266
>gi|116789194|gb|ABK25154.1| unknown [Picea sitchensis]
Length = 240
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/98 (88%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 143 MGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 202
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADP NNAWAYATNFVPGK
Sbjct: 203 FVQAIVTGKGPIENLFDHLADPTANNAWAYATNFVPGK 240
>gi|116779526|gb|ABK21323.1| unknown [Picea sitchensis]
Length = 266
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/98 (88%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADP NNAWAYATNFVPGK
Sbjct: 229 FVQAIVTGKGPIENLFDHLADPTANNAWAYATNFVPGK 266
>gi|116783114|gb|ABK22798.1| unknown [Picea sitchensis]
Length = 253
Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/98 (88%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 156 MGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 215
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADP NNAWAYATNFVPGK
Sbjct: 216 FVQAIVTGKGPIENLFDHLADPTANNAWAYATNFVPGK 253
>gi|297826903|ref|XP_002881334.1| chlorophyll A-B-binding protein 2 precursor [Arabidopsis lyrata
subsp. lyrata]
gi|297327173|gb|EFH57593.1| chlorophyll A-B-binding protein 2 precursor [Arabidopsis lyrata
subsp. lyrata]
Length = 245
Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 91/99 (91%), Positives = 94/99 (94%), Gaps = 1/99 (1%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MGAVEGYR+AG GPLGE D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFG
Sbjct: 147 MGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFG 206
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 207 FFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 245
>gi|227138|prf||1615137A chlorophyll a/b binding protein P25
Length = 226
Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/98 (89%), Positives = 92/98 (93%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 129 MGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 188
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 189 FVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 226
>gi|297823231|ref|XP_002879498.1| LHB1B1 [Arabidopsis lyrata subsp. lyrata]
gi|297325337|gb|EFH55757.1| LHB1B1 [Arabidopsis lyrata subsp. lyrata]
Length = 266
Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/99 (90%), Positives = 94/99 (94%), Gaps = 1/99 (1%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MGAVEGYR+AG GPLGE D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFG
Sbjct: 168 MGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFG 227
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FFVQAIVTGKGPLENL+DHLADPVNNNAWA+ATNFVPGK
Sbjct: 228 FFVQAIVTGKGPLENLSDHLADPVNNNAWAFATNFVPGK 266
>gi|12324161|gb|AAG52048.1|AC022455_2 chlorophyll A-B-binding protein 2 precursor, 5' partial; 1-750
[Arabidopsis thaliana]
Length = 249
Score = 181 bits (460), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 90/99 (90%), Positives = 94/99 (94%), Gaps = 1/99 (1%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MGAVEGYR+AG GPLGE D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFG
Sbjct: 151 MGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFG 210
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FFVQAIVTGKGP+ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 211 FFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 249
>gi|1345698|sp|P27518.2|CB21_GOSHI RecName: Full=Chlorophyll a-b binding protein 151, chloroplastic;
AltName: Full=LHCII type II CAB-151; Short=LHCP; Flags:
Precursor
gi|452314|emb|CAA38025.1| chlorophyll ab binding protein [Gossypium hirsutum]
Length = 265
Score = 181 bits (459), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 87/98 (88%), Positives = 92/98 (93%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE DP+YPGG+FDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPIENLFDHLADPVANNAWAYATNFVPGK 265
>gi|255581778|ref|XP_002531690.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223528666|gb|EEF30681.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 265
Score = 181 bits (459), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 87/98 (88%), Positives = 92/98 (93%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE DP+YPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 265
>gi|16374|emb|CAA27542.1| chlorophyll a/b binding protein (LHCP AB 180) [Arabidopsis
thaliana]
Length = 233
Score = 181 bits (459), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 90/99 (90%), Positives = 94/99 (94%), Gaps = 1/99 (1%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MGAVEGYR+AG GPLGE D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFG
Sbjct: 135 MGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFG 194
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FFVQAIVTGKGP+ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 195 FFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 233
>gi|222618804|gb|EEE54936.1| hypothetical protein OsJ_02493 [Oryza sativa Japonica Group]
Length = 207
Score = 181 bits (458), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 90/98 (91%), Positives = 90/98 (91%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 110 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 169
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP LADPVNNNAWAYATNFVPGK
Sbjct: 170 FVQAIVTGKGPPREPRRPLADPVNNNAWAYATNFVPGK 207
>gi|511153|emb|CAA84525.1| chlorophyll a,b binding protein type I [Solanum tuberosum]
Length = 265
Score = 181 bits (458), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 86/98 (87%), Positives = 92/98 (93%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE D +YPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL+DH+ADPV NNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPIENLSDHIADPVANNAWAYATNFVPGK 265
>gi|116782415|gb|ABK22497.1| unknown [Picea sitchensis]
gi|116786586|gb|ABK24164.1| unknown [Picea sitchensis]
gi|116791880|gb|ABK26145.1| unknown [Picea sitchensis]
gi|148908679|gb|ABR17447.1| unknown [Picea sitchensis]
gi|148909254|gb|ABR17727.1| unknown [Picea sitchensis]
gi|224284476|gb|ACN39972.1| unknown [Picea sitchensis]
gi|224285327|gb|ACN40388.1| unknown [Picea sitchensis]
Length = 266
Score = 181 bits (458), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 86/98 (87%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE DPLYPGG+FDPLGLADDPE+FAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPESFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADP NNAWAYATNFVPGK
Sbjct: 229 FVQAIVTGKGPIENLYDHLADPTANNAWAYATNFVPGK 266
>gi|148908677|gb|ABR17446.1| unknown [Picea sitchensis]
Length = 160
Score = 181 bits (458), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 87/98 (88%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 63 MGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 122
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADP NNAWAYATNFVPGK
Sbjct: 123 FVQAIVTGKGPIENLFDHLADPTANNAWAYATNFVPGK 160
>gi|20218821|emb|CAC84495.1| putative chlorophyll A-B binding protein type I [Pinus pinaster]
Length = 195
Score = 181 bits (458), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 87/98 (88%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 98 MGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 157
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADP NNAWAYATNFVPGK
Sbjct: 158 FVQAIVTGKGPIENLYDHLADPTANNAWAYATNFVPGK 195
>gi|386784577|gb|AFJ25031.1| chlorophyll a/b binding protein [Lonicera japonica]
Length = 265
Score = 181 bits (458), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 87/98 (88%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYRI GGPLGE D LYPGG+FDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGLIEGYRIGGGPLGEGLDSLYPGGAFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPVENLYDHLADPVANNAWAYATNFVPGK 265
>gi|224131818|ref|XP_002321186.1| light-harvesting complex II protein Lhcb2 [Populus trichocarpa]
gi|222861959|gb|EEE99501.1| light-harvesting complex II protein Lhcb2 [Populus trichocarpa]
Length = 265
Score = 180 bits (457), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 85/98 (86%), Positives = 92/98 (93%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE DP+YPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAI+TGKGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 228 FVQAIITGKGPIENLLDHLADPVANNAWAYATNFVPGK 265
>gi|126566046|gb|ABO20852.1| chlorophyll a/b binding protein of LHCII type I [Lilium
longiflorum]
Length = 264
Score = 180 bits (457), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 86/98 (87%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYRI GGPLGE DPLYPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 167 MGFIEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADP NNAWAYATNFVPGK
Sbjct: 227 FVQAIVTGKGPVENLYDHLADPATNNAWAYATNFVPGK 264
>gi|340002459|gb|AEK26372.1| chloroplast photosystem II chlorophyll a/b binding protein [Sedum
alfredii]
Length = 265
Score = 180 bits (457), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 86/98 (87%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE D +YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGLIEGYRVGGGPLGEGLDKIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPVENLFDHLADPVANNAWAYATNFVPGK 265
>gi|17473828|gb|AAL38341.1| chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|21387019|gb|AAM47913.1| chlorophyll a/b-binding protein [Arabidopsis thaliana]
Length = 267
Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/99 (89%), Positives = 93/99 (93%), Gaps = 1/99 (1%)
Query: 1 MGAVEGYRIAGG-PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MGAVEGYR+AG PLGE D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFG
Sbjct: 169 MGAVEGYRVAGNEPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFG 228
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FFVQAIVTGKGP+ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 229 FFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 267
>gi|77157635|dbj|BAE46383.1| chlorophyll a/b binding protein [Panax ginseng]
Length = 265
Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/98 (88%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE D +YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGFVEGYRVGGGPLGEGLDKIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 265
>gi|224064850|ref|XP_002301582.1| light-harvesting complex II protein Lhcb2 [Populus trichocarpa]
gi|118486872|gb|ABK95270.1| unknown [Populus trichocarpa]
gi|118488008|gb|ABK95825.1| unknown [Populus trichocarpa]
gi|222843308|gb|EEE80855.1| light-harvesting complex II protein Lhcb2 [Populus trichocarpa]
Length = 265
Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/98 (87%), Positives = 92/98 (93%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE DP+YPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPVENLLDHLADPVANNAWAYATNFVPGK 265
>gi|115832|sp|P20866.1|CB2_PHYPA RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor
gi|169020|gb|AAA33636.1| major chlorophyll binding protein [Physcomitrella patens]
Length = 269
Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/97 (89%), Positives = 90/97 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEVTDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 171 MGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 230
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGPLENL DHLADPV NNAWAYA PG
Sbjct: 231 FVQAIVTGKGPLENLNDHLADPVANNAWAYAPTSPPG 267
>gi|375152320|gb|AFA36618.1| chlorophyll a/b binding protein, partial [Lolium perenne]
Length = 91
Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/91 (95%), Positives = 90/91 (98%)
Query: 8 RIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT 67
RIAGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVT
Sbjct: 1 RIAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVT 60
Query: 68 GKGPLENLADHLADPVNNNAWAYATNFVPGK 98
GKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 61 GKGPLENLADHLADPVNNNAWAFATNFVPGK 91
>gi|297845914|ref|XP_002890838.1| hypothetical protein ARALYDRAFT_473204 [Arabidopsis lyrata subsp.
lyrata]
gi|297336680|gb|EFH67097.1| hypothetical protein ARALYDRAFT_473204 [Arabidopsis lyrata subsp.
lyrata]
Length = 262
Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/99 (89%), Positives = 93/99 (93%), Gaps = 1/99 (1%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MGAVEGYR+AG GPLGE D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFG
Sbjct: 164 MGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFG 223
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FFVQAIVTGKGP+ENLADHLADPV NNAWA+ATNFVPGK
Sbjct: 224 FFVQAIVTGKGPIENLADHLADPVTNNAWAFATNFVPGK 262
>gi|1006704|emb|CAA89823.1| light-harvesting chlorophyll a/b binding protein of photosystem II
[Pseudotsuga menziesii]
Length = 234
Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/98 (87%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 137 MGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 196
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADP NNAWAYATNFVPGK
Sbjct: 197 FVQAIVTGKGPIENLFDHLADPTANNAWAYATNFVPGK 234
>gi|297851414|ref|XP_002893588.1| hypothetical protein ARALYDRAFT_473203 [Arabidopsis lyrata subsp.
lyrata]
gi|297339430|gb|EFH69847.1| hypothetical protein ARALYDRAFT_473203 [Arabidopsis lyrata subsp.
lyrata]
Length = 262
Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/99 (89%), Positives = 93/99 (93%), Gaps = 1/99 (1%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MGAVEGYR+AG GPLGE D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFG
Sbjct: 164 MGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFG 223
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FFVQAIVTGKGP+ENLADHLADPV NNAWA+ATNFVPGK
Sbjct: 224 FFVQAIVTGKGPIENLADHLADPVTNNAWAFATNFVPGK 262
>gi|115806|sp|P14279.1|CB25_SOLLC RecName: Full=Chlorophyll a-b binding protein 5, chloroplastic;
AltName: Full=LHCII type I CAB-5; Short=LHCP; Flags:
Precursor
gi|170392|gb|AAA34142.1| chlorophyll a/b-binding protein precursor, partial [Solanum
lycopersicum]
Length = 237
Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/98 (87%), Positives = 92/98 (93%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE D +YPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 140 MGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 199
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL+DH+ADPV NNAWAYATNFVPGK
Sbjct: 200 FVQAIVTGKGPIENLSDHIADPVANNAWAYATNFVPGK 237
>gi|339716018|gb|AEJ88256.1| putative light harvesting chlorophyll a/b-binding protein
[Wolffia australiana]
Length = 92
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/92 (94%), Positives = 89/92 (96%)
Query: 7 YRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 66
YR+AGGPLGEV DPLYPGGSFDPL LA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV
Sbjct: 1 YRVAGGPLGEVVDPLYPGGSFDPLNLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 60
Query: 67 TGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
TGKGPLENLADHLADPVNNNAWAYATNFVPG
Sbjct: 61 TGKGPLENLADHLADPVNNNAWAYATNFVPGN 92
>gi|56122690|gb|AAV74408.1| chloroplast chlorophyll A/B binding protein [Manihot esculenta]
Length = 243
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/98 (88%), Positives = 92/98 (93%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE DP+YPGG+FDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 146 MGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGF 205
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 206 FVQAIVTGKGPIENLFDHLADPVANNAWAYATNFVPGK 243
>gi|2765356|emb|CAA74179.1| chlorophyll a/b-binding protein [Beta vulgaris subsp. vulgaris]
Length = 264
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/98 (86%), Positives = 92/98 (93%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE D LYPGG+FDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 167 MGLIEGYRVGGGPLGEGLDKLYPGGAFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL+DHLADPV NNAWA+ATNFVPGK
Sbjct: 227 FVQAIVTGKGPIENLSDHLADPVANNAWAFATNFVPGK 264
>gi|31323256|gb|AAP44089.1| chlorophyll a/b binding protein [Brassica oleracea]
Length = 273
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/99 (90%), Positives = 92/99 (92%), Gaps = 1/99 (1%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MGAVEGYR+ G GPLGE D LYPGGSFDPLGLA DP AFAELKVKEIKNGRLAMFSMFG
Sbjct: 169 MGAVEGYRVPGDGPLGEAEDLLYPGGSFDPLGLATDPVAFAELKVKEIKNGRLAMFSMFG 228
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 229 FFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 267
>gi|373882292|gb|AEY78525.1| chlorophyll a/b-binding protein [Tagetes erecta]
Length = 265
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/98 (86%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE D +YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGLIEGYRVGGGPLGEGLDKIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHL+DPV NNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPIENLFDHLSDPVANNAWAYATNFVPGK 265
>gi|115802|sp|P27494.1|CB23_TOBAC RecName: Full=Chlorophyll a-b binding protein 36, chloroplastic;
AltName: Full=LHCII type I CAB-36; Short=LHCP; Flags:
Precursor
gi|19827|emb|CAA41188.1| chlorophyll a/b binding protein [Nicotiana tabacum]
Length = 265
Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/98 (86%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE D +YPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGLIEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 265
>gi|449453598|ref|XP_004144543.1| PREDICTED: chlorophyll a-b binding protein 151, chloroplastic-like
[Cucumis sativus]
gi|449511798|ref|XP_004164056.1| PREDICTED: chlorophyll a-b binding protein 151, chloroplastic-like
[Cucumis sativus]
Length = 265
Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/98 (86%), Positives = 92/98 (93%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE DP+YPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 265
>gi|5714656|gb|AAD48017.1|AF165529_1 chlorophyll a/b binding protein [Rumex palustris]
Length = 264
Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/98 (87%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE D LYPGG+FDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 167 MGFVEGYRVGGGPLGEDLDKLYPGGAFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 227 FVQAIVTGKGPVENLVDHIADPVANNAWAYATNFVPGK 264
>gi|225447576|ref|XP_002271687.1| PREDICTED: chlorophyll a-b binding protein 151, chloroplastic
[Vitis vinifera]
gi|147794485|emb|CAN71610.1| hypothetical protein VITISV_000630 [Vitis vinifera]
Length = 265
Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/98 (87%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE D +YPGG+FDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGFVEGYRVGGGPLGEGLDAIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPIENLVDHLADPVANNAWAYATNFVPGK 265
>gi|398599|emb|CAA52750.1| chlorophyll a/b binding protein [Amaranthus hypochondriacus]
Length = 264
Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/98 (85%), Positives = 92/98 (93%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE D +YPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 167 MGLIEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL+DHLADPV NNAWAYATNFVPGK
Sbjct: 227 FVQAIVTGKGPIENLSDHLADPVANNAWAYATNFVPGK 264
>gi|102140026|gb|ABF70157.1| chlorophyll A-B binding protein (CAB), putative [Musa acuminata]
Length = 264
Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/98 (87%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE D +YPGG+FDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 167 MGFVEGYRVGGGPLGEGLDAIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 227 FVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 264
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 12 GPLGEVTDPLYPGGSF------DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 65
GP E T P Y G F D GL+ DPE FA+ + E+ +GR AM G I
Sbjct: 58 GPFSEQT-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPEI 116
Query: 66 VTGKG 70
+ G
Sbjct: 117 LAKNG 121
>gi|407970998|ref|NP_001234739.1| chlorophyll a-b binding protein 4, chloroplastic [Solanum
lycopersicum]
gi|115803|sp|P14278.1|CB24_SOLLC RecName: Full=Chlorophyll a-b binding protein 4, chloroplastic;
AltName: Full=LHCII type I CAB-4; Short=LHCP; Flags:
Precursor
gi|170390|gb|AAA34141.1| chlorophyll a/b-binding protein precursor [Solanum lycopersicum]
Length = 265
Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 85/98 (86%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE D +YPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL+DH+ DPV NNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPIENLSDHINDPVANNAWAYATNFVPGK 265
>gi|454250|emb|CAA82853.1| light-harvesting chlorophyll a/b binding protein [Trifolium repens]
Length = 167
Score = 178 bits (451), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 86/98 (87%), Positives = 92/98 (93%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYRI GGPLGE DPLYPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 70 MGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF 129
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP++NL DHLADPV NNAWAYATNFVPG+
Sbjct: 130 FVQAIVTGKGPVQNLYDHLADPVANNAWAYATNFVPGQ 167
>gi|3560529|gb|AAC34983.1| light harvesting chlorophyll A/B binding protein [Prunus persica]
Length = 265
Score = 178 bits (451), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 86/98 (87%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKE+KNGRLAM SMFGF
Sbjct: 168 MGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKELKNGRLAMTSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPVENLYDHVADPVANNAWAYATNFVPGK 265
>gi|53748425|emb|CAH59405.1| light harvesting protein 1 [Plantago major]
Length = 229
Score = 177 bits (450), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 85/94 (90%), Positives = 89/94 (94%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 132 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGF 191
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 94
FVQAIVTGKGPLENLADHLADPVNNNAWA+
Sbjct: 192 FVQAIVTGKGPLENLADHLADPVNNNAWAFCHKL 225
>gi|118489455|gb|ABK96530.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 265
Score = 177 bits (450), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 85/98 (86%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE DP+YPGG+FDPLGLADDP+AFAELKVKE+KNGRLA FSMFGF
Sbjct: 168 MGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLATFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPVENLLDHLADPVANNAWAYATNFVPGK 265
>gi|115811|sp|P12062.1|CB26_PETSP RecName: Full=Chlorophyll a-b binding protein 37, chloroplastic;
AltName: Full=LHCII type I CAB-37; Short=LHCP; Flags:
Precursor
gi|20512|emb|CAA28639.1| chlorophyll a/b binding protein [Petunia x hybrida]
Length = 265
Score = 177 bits (450), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 85/98 (86%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE D +YPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 228 FVQAIVTGKGPIENLYDHVADPVANNAWAFATNFVPGK 265
>gi|146150146|gb|ABQ02464.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 263
Score = 177 bits (449), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 84/98 (85%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE D +YPGG+FDPLGLADDP+ FAELKVKE+KN RLAMFSMFGF
Sbjct: 166 MGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNSRLAMFSMFGF 225
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENLADH+ADPVNNNAWAYATNFVPGK
Sbjct: 226 FVQAIVTGKGPIENLADHVADPVNNNAWAYATNFVPGK 263
>gi|115776|sp|P14584.1|CB21_RAPSA RecName: Full=Chlorophyll a-b binding of LHCII type 1 protein;
AltName: Full=Chlorophyll a-b binding of LHCII type I
protein; Short=CAB; Short=LHCP
gi|21100|emb|CAA34640.1| chlorophyll a/b binding protein (124 AA) [Raphanus sativus]
Length = 124
Score = 177 bits (449), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 89/99 (89%), Positives = 91/99 (91%), Gaps = 1/99 (1%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MGAVEGYR+AG GPLGE D LYPGGSFDPL DPEAFAELKVKEIKNGRLAMFSMFG
Sbjct: 26 MGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLASLTDPEAFAELKVKEIKNGRLAMFSMFG 85
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 86 FFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 124
>gi|217072028|gb|ACJ84374.1| unknown [Medicago truncatula]
Length = 265
Score = 177 bits (449), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 84/98 (85%), Positives = 92/98 (93%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE DPLYPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP++NL DH+ADPV NNAWAYATNFVPG+
Sbjct: 228 FVQAIVTGKGPVQNLYDHVADPVANNAWAYATNFVPGQ 265
>gi|357495319|ref|XP_003617948.1| Chlorophyll a/b binding protein [Medicago truncatula]
gi|355519283|gb|AET00907.1| Chlorophyll a/b binding protein [Medicago truncatula]
Length = 265
Score = 177 bits (449), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 84/98 (85%), Positives = 92/98 (93%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE DPLYPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP++NL DH+ADPV NNAWAYATNFVPG+
Sbjct: 228 FVQAIVTGKGPVQNLYDHVADPVANNAWAYATNFVPGQ 265
>gi|312281813|dbj|BAJ33772.1| unnamed protein product [Thellungiella halophila]
Length = 266
Score = 177 bits (449), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 84/98 (85%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYRI GGPLGE DPLYPGG+FDPL LA+DPEAF+ELKVKE+KNGRLAMFSMFGF
Sbjct: 169 MGLIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADPV NNAW+YATNFVPGK
Sbjct: 229 FVQAIVTGKGPIENLFDHLADPVANNAWSYATNFVPGK 266
>gi|397789256|gb|AFO67217.1| putative chlorophyll a/b binding protein [Aralia elata]
Length = 265
Score = 177 bits (449), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 86/98 (87%), Positives = 90/98 (91%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLG D +YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGFVEGYRVGGGPLGWGLDKIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 265
>gi|126362926|gb|ABO10493.1| light-harvesting chlorophyll a/b binding protein [Bambusa oldhamii]
Length = 263
Score = 177 bits (448), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 85/98 (86%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYRI GGPLGE D +YPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGF
Sbjct: 166 MGFVEGYRIGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGF 225
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DH+ADPVNNNAWAYATNFVPGK
Sbjct: 226 FVQAIVTGKGPIENLFDHVADPVNNNAWAYATNFVPGK 263
>gi|297815030|ref|XP_002875398.1| LHCB2:4 [Arabidopsis lyrata subsp. lyrata]
gi|297321236|gb|EFH51657.1| LHCB2:4 [Arabidopsis lyrata subsp. lyrata]
Length = 266
Score = 177 bits (448), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 84/98 (85%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYRI GGPLGE DPLYPGG+FDPL LA+DPEAF+ELKVKE+KNGRLAMFSMFGF
Sbjct: 169 MGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 229 FVQAIVTGKGPIENLFDHIADPVANNAWAYATNFVPGK 266
>gi|15224465|ref|NP_178582.1| photosystem II light harvesting complex protein 2.2 [Arabidopsis
thaliana]
gi|4741946|gb|AAD28770.1|AF134123_1 Lhcb2 protein [Arabidopsis thaliana]
gi|4585935|gb|AAD25595.1| putative chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|15809901|gb|AAL06878.1| At2g05070/F1O13.20 [Arabidopsis thaliana]
gi|17064974|gb|AAL32641.1| putative chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|17978863|gb|AAL47403.1| At2g05070/F1O13.20 [Arabidopsis thaliana]
gi|20260048|gb|AAM13371.1| putative chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|330250799|gb|AEC05893.1| photosystem II light harvesting complex protein 2.2 [Arabidopsis
thaliana]
Length = 265
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/98 (85%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYRI GGPLGE DPLYPGG+FDPL LA+DPEAF+ELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADPV NNAW+YATNFVPGK
Sbjct: 228 FVQAIVTGKGPIENLFDHLADPVANNAWSYATNFVPGK 265
>gi|365268967|gb|AEW70716.1| light harvesting chlorophyll a-b binding protein 2-1 [Phyllostachys
edulis]
Length = 263
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/98 (85%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE D +YPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGF
Sbjct: 166 MGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGF 225
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DH+ADPVNNNAWAYATNFVPGK
Sbjct: 226 FVQAIVTGKGPIENLFDHVADPVNNNAWAYATNFVPGK 263
>gi|16805332|gb|AAL29886.1|M97171_1 chlorophyll a/b binding protein type II [Glycine max]
Length = 265
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/98 (84%), Positives = 92/98 (93%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE DP+YPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP++NL DH+ADPV NNAWAYATNFVPG+
Sbjct: 228 FVQAIVTGKGPIQNLYDHVADPVANNAWAYATNFVPGQ 265
>gi|297835814|ref|XP_002885789.1| Lhcb2 protein [Arabidopsis lyrata subsp. lyrata]
gi|297331629|gb|EFH62048.1| Lhcb2 protein [Arabidopsis lyrata subsp. lyrata]
Length = 265
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/98 (85%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYRI GGPLGE DPLYPGG+FDPL LA+DPEAF+ELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADPV NNAW+YATNFVPGK
Sbjct: 228 FVQAIVTGKGPIENLFDHLADPVANNAWSYATNFVPGK 265
>gi|4741948|gb|AAD28771.1|AF134124_1 Lhcb2 protein [Arabidopsis thaliana]
Length = 265
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/98 (85%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYRI GGPLGE DPLYPGG+FDPL LA+DPEAF+ELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADPV NNAW+YATNFVPGK
Sbjct: 228 FVQAIVTGKGPIENLFDHLADPVANNAWSYATNFVPGK 265
>gi|4741944|gb|AAD28769.1|AF134122_1 Lhcb2 protein [Arabidopsis thaliana]
Length = 265
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/98 (85%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYRI GGPLGE DPLYPGG+FDPL LA+DPEAF+ELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADPV NNAW+YATNFVPGK
Sbjct: 228 FVQAIVTGKGPIENLFDHLADPVANNAWSYATNFVPGK 265
>gi|358248712|ref|NP_001240183.1| uncharacterized protein LOC100793702 [Glycine max]
gi|255635740|gb|ACU18219.1| unknown [Glycine max]
Length = 265
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/98 (84%), Positives = 92/98 (93%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE DP+YPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP++NL DH+ADPV NNAWAYATNFVPG+
Sbjct: 228 FVQAIVTGKGPIQNLYDHVADPVANNAWAYATNFVPGQ 265
>gi|15232249|ref|NP_189406.1| photosystem II light harvesting complex protein 2.3 [Arabidopsis
thaliana]
gi|4741950|gb|AAD28772.1|AF134125_1 Lhcb2 protein [Arabidopsis thaliana]
gi|13899125|gb|AAK48984.1|AF370557_1 light harvesting chlorophyll a/b-binding protein [Arabidopsis
thaliana]
gi|9294474|dbj|BAB02693.1| light harvesting chlorophyll a/b-binding protein [Arabidopsis
thaliana]
gi|30023746|gb|AAP13406.1| At3g27700 [Arabidopsis thaliana]
gi|332643831|gb|AEE77352.1| photosystem II light harvesting complex protein 2.3 [Arabidopsis
thaliana]
Length = 266
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/98 (85%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYRI GGPLGE DPLYPGG+FDPL LA+DPEAF+ELKVKE+KNGRLAMFSMFGF
Sbjct: 169 MGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 229 FVQAIVTGKGPIENLFDHIADPVANNAWAYATNFVPGK 266
>gi|359806053|ref|NP_001241179.1| uncharacterized protein LOC100815789 [Glycine max]
gi|255638947|gb|ACU19775.1| unknown [Glycine max]
Length = 265
Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/98 (84%), Positives = 92/98 (93%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE DP+YPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP++NL DH+ADPV NNAWAYATNFVPG+
Sbjct: 228 FVQAIVTGKGPIQNLYDHVADPVANNAWAYATNFVPGQ 265
>gi|115790|sp|P15192.1|CB22_PINSY RecName: Full=Chlorophyll a-b binding protein type 2 member 2;
AltName: Full=Chlorophyll a-b binding protein type II 2;
Short=CAB; AltName: Full=LHCP
gi|169376|gb|AAA33776.1| chlorophyll a/b-binding protein [Pinus sylvestris]
Length = 150
Score = 176 bits (446), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/98 (87%), Positives = 90/98 (91%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE DPLYPG +FDPLGLADDPEA AELKVKEIKNGRLAMFSMFGF
Sbjct: 53 MGLIEGYRVGGGPLGEGLDPLYPGDAFDPLGLADDPEAKAELKVKEIKNGRLAMFSMFGF 112
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 113 FVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 150
>gi|388515841|gb|AFK45982.1| unknown [Lotus japonicus]
Length = 265
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 82/98 (83%), Positives = 92/98 (93%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE DPLYPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP++NL DH+ADPV NNAWA+ATNFVPG+
Sbjct: 228 FVQAIVTGKGPIQNLYDHVADPVANNAWAFATNFVPGQ 265
>gi|227206230|dbj|BAH57170.1| AT3G27690 [Arabidopsis thaliana]
Length = 160
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/98 (85%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYRI GGPLGE DPLYPGG+FDPL LA+DPEAF+ELKVKE+KNGRLAMFSMFGF
Sbjct: 63 MGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGF 122
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 123 FVQAIVTGKGPIENLFDHIADPVANNAWAYATNFVPGK 160
>gi|115775|sp|P10049.1|CB21_PINTH RecName: Full=Chlorophyll a-b binding protein type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|20935|emb|CAA31773.1| chlorophylla/b-binding preprotein (AA -37 to 229) [Pinus
thunbergii]
Length = 266
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/98 (86%), Positives = 89/98 (90%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GG LGE DPL PGG+FDPLGLADDPEA AELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGLIEGYRVGGGTLGEGLDPLLPGGAFDPLGLADDPEACAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 229 FVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 266
>gi|413968458|gb|AFW90566.1| chlorophyll a/b-binding protein [Solanum tuberosum]
Length = 271
Score = 175 bits (444), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/96 (86%), Positives = 89/96 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE D +YPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP+ENL+DH+ DPV NNAWAYATNFVP
Sbjct: 228 FVQAIVTGKGPIENLSDHINDPVANNAWAYATNFVP 263
>gi|56809381|gb|AAW31512.1| light-harvesting chlorophyll-a/b binding protein Lhcb2 [Pisum
sativum]
Length = 265
Score = 175 bits (443), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 82/98 (83%), Positives = 92/98 (93%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE DPLYPGG+FDPLGLADDP++FAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDSFAELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP++NL DH+ADPV NNAWA+ATNFVPG+
Sbjct: 228 FVQAIVTGKGPIQNLYDHVADPVANNAWAFATNFVPGQ 265
>gi|115797|sp|P27520.1|CB215_PEA RecName: Full=Chlorophyll a-b binding protein 215, chloroplastic;
AltName: Full=LHCII type II CAB-215; Short=LHCP; Flags:
Precursor
gi|20658|emb|CAA40365.1| chlorophyll a/b-binding protein [Pisum sativum]
Length = 265
Score = 175 bits (443), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 82/98 (83%), Positives = 92/98 (93%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE DPLYPGG+FDPLGLADDP++FAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDSFAELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP++NL DH+ADPV NNAWA+ATNFVPG+
Sbjct: 228 FVQAIVTGKGPIQNLYDHVADPVANNAWAFATNFVPGQ 265
>gi|15224471|ref|NP_178585.1| photosystem II light harvesting complex protein 2.1 [Arabidopsis
thaliana]
gi|4874296|gb|AAD31358.1| putative chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|15450349|gb|AAK96468.1| At2g05100/F15L11.2 [Arabidopsis thaliana]
gi|15450494|gb|AAK96540.1| At2g05100/F15L11.2 [Arabidopsis thaliana]
gi|25054901|gb|AAN71932.1| putative chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|330250800|gb|AEC05894.1| photosystem II light harvesting complex protein 2.1 [Arabidopsis
thaliana]
Length = 265
Score = 174 bits (442), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/97 (85%), Positives = 90/97 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYRI GGPLGE DPLYPGG+FDPL LA+DPEAF+ELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGP+ENL DHLADPV NNAW+YATNFVPG
Sbjct: 228 FVQAIVTGKGPIENLFDHLADPVANNAWSYATNFVPG 264
>gi|9587203|gb|AAF89205.1|AF279248_1 LHCII type II chlorophyll a/b-binding protein [Vigna radiata]
Length = 265
Score = 174 bits (442), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 82/98 (83%), Positives = 92/98 (93%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE DP+YPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFS+FGF
Sbjct: 168 MGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSVFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP++NL DH+ADPV NNAWAYATNFVPG+
Sbjct: 228 FVQAIVTGKGPIQNLYDHVADPVANNAWAYATNFVPGQ 265
>gi|62176932|emb|CAG25596.1| putative chlorophyll a/b binding protein [Triticum durum]
Length = 250
Score = 174 bits (442), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/87 (96%), Positives = 86/87 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 164 MGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 223
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNA 87
FVQAIVTGKGPLENLADH+ADPVNNNA
Sbjct: 224 FVQAIVTGKGPLENLADHIADPVNNNA 250
>gi|388514477|gb|AFK45300.1| unknown [Medicago truncatula]
Length = 265
Score = 174 bits (442), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/98 (84%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE DPLYPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVT KGP++NL DH+ADPV NNAWAYATNFVPG+
Sbjct: 228 FVQAIVTDKGPVQNLYDHVADPVANNAWAYATNFVPGQ 265
>gi|297815028|ref|XP_002875397.1| LHCB2:4 [Arabidopsis lyrata subsp. lyrata]
gi|297321235|gb|EFH51656.1| LHCB2:4 [Arabidopsis lyrata subsp. lyrata]
Length = 266
Score = 174 bits (441), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 83/98 (84%), Positives = 90/98 (91%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYRI GGPLGE DPLYPGG+FDPL LA+DPEAF+ELKVKE+KNGRLAMF MFGF
Sbjct: 169 MGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFPMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 229 FVQAIVTGKGPIENLFDHIADPVANNAWAYATNFVPGK 266
>gi|90288037|gb|ABD92879.1| chloroplast chlorophyll a/b binding protein [Pachysandra
terminalis]
Length = 264
Score = 174 bits (441), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/98 (85%), Positives = 89/98 (90%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE D +YPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 167 MGFIEGYRVGGGPLGEGLDSIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLAD NNAWAYATNFVPGK
Sbjct: 227 FVQAIVTGKGPIENLFDHLADLAANNAWAYATNFVPGK 264
>gi|146150144|gb|ABQ02463.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 263
Score = 174 bits (441), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 83/98 (84%), Positives = 90/98 (91%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE D +YPGG+FDPLGLADDP+ FAELKVKE+KNG LAMFSMFGF
Sbjct: 166 MGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGSLAMFSMFGF 225
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DH+ADPVNNNAWAYATNFVPGK
Sbjct: 226 FVQAIVTGKGPIENLFDHVADPVNNNAWAYATNFVPGK 263
>gi|115453971|ref|NP_001050586.1| Os03g0592500 [Oryza sativa Japonica Group]
gi|122246902|sp|Q10HD0.1|CB23_ORYSJ RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor
gi|152013384|sp|A2XJ35.1|CB23_ORYSI RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor
gi|50839002|gb|AAT81763.1| chlorophyll a/b binding protein [Oryza sativa Japonica Group]
gi|108709618|gb|ABF97413.1| Chlorophyll a-b binding protein, chloroplast precursor, putative,
expressed [Oryza sativa Japonica Group]
gi|113549057|dbj|BAF12500.1| Os03g0592500 [Oryza sativa Japonica Group]
gi|125544706|gb|EAY90845.1| hypothetical protein OsI_12453 [Oryza sativa Indica Group]
gi|125586998|gb|EAZ27662.1| hypothetical protein OsJ_11611 [Oryza sativa Japonica Group]
gi|385718838|gb|AFI71846.1| chlorophyll a/b binbing protein [Oryza sativa]
Length = 263
Score = 174 bits (440), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 83/98 (84%), Positives = 90/98 (91%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE D +YPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGF
Sbjct: 166 MGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGF 225
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 226 FVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 263
>gi|413968514|gb|AFW90594.1| chloroplast chlorophyll a/b binding protein [Solanum tuberosum]
Length = 276
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/96 (89%), Positives = 86/96 (89%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFS FGF
Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSTFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGPLENLADHLADPVNNNA P
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNACPTPQTLSP 263
>gi|149392272|gb|ABR25974.1| chloroplast chlorophyll a-b binding protein precursor [Oryza sativa
Indica Group]
Length = 253
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/98 (84%), Positives = 90/98 (91%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE D +YPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGF
Sbjct: 156 MGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGF 215
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 216 FVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 253
>gi|108709619|gb|ABF97414.1| Chlorophyll a-b binding protein, chloroplast precursor, putative,
expressed [Oryza sativa Japonica Group]
Length = 219
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/98 (84%), Positives = 90/98 (91%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE D +YPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGF
Sbjct: 122 MGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGF 181
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 182 FVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 219
>gi|914283|gb|AAB34067.1| light-harvesting complex b type 2, Lhcb2 [Ginkgo biloba, 3-4 week
old seedlings, Peptide Partial, 130 aa]
Length = 130
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/98 (87%), Positives = 92/98 (93%), Gaps = 1/98 (1%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYRIAG P G + DPLYPGG+FDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 34 MGFVEGYRIAGDPSGGL-DPLYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF 92
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADPVNNNAWA+ATNFVPGK
Sbjct: 93 FVQAIVTGKGPIENLYDHLADPVNNNAWAFATNFVPGK 130
>gi|29123378|gb|AAO62942.1| chlorophyll a/b binding protein [Nicotiana tabacum]
Length = 265
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/98 (83%), Positives = 89/98 (90%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE D +YPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGLIEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL D + DPV NNAWA+ATNFVPGK
Sbjct: 228 FVQAIVTGKGPIENLFDQINDPVANNAWAFATNFVPGK 265
>gi|3126854|gb|AAC15992.1| chlorophyll a/b binding protein [Oryza sativa Japonica Group]
Length = 263
Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 82/98 (83%), Positives = 89/98 (90%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE D +YP G+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGF
Sbjct: 166 MGFVEGYRVGGGPLGEGLDKVYPSGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGF 225
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 226 FVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 263
>gi|218174|dbj|BAA00537.1| type II light-harvesting chlorophyll a/b-binding protein [Oryza
sativa Japonica Group]
Length = 263
Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 81/98 (82%), Positives = 89/98 (90%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE D +YPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGF
Sbjct: 166 MGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGF 225
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DH+ DPV NNAW+YATNFVPGK
Sbjct: 226 FVQAIVTGKGPIENLFDHVTDPVANNAWSYATNFVPGK 263
>gi|346987813|gb|AEO51757.1| chloroplast chlorophyll A/B binding protein [Dimocarpus longan]
Length = 265
Score = 171 bits (433), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/98 (86%), Positives = 89/98 (90%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYRI GGPLGE DPLYPGG+FDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIV GKGP+ENL+D LA PV NNAWAYA NFVPGK
Sbjct: 228 FVQAIVPGKGPIENLSDPLAAPVANNAWAYAPNFVPGK 265
>gi|227612|prf||1707316B chlorophyll a/b binding protein 2
Length = 263
Score = 170 bits (431), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 81/98 (82%), Positives = 88/98 (89%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE D +YPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGF
Sbjct: 166 MGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGF 225
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIV GKGP+ENL DH+ DPV NNAWAYATNFVPGK
Sbjct: 226 FVQAIVRGKGPIENLFDHVTDPVANNAWAYATNFVPGK 263
>gi|168812218|gb|ACA30285.1| putative chlorophyll A-B binding protein type I [Cupressus
sempervirens]
Length = 134
Score = 170 bits (431), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 82/94 (87%), Positives = 86/94 (91%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAM SMFGF
Sbjct: 41 MGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMSSMFGF 100
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 94
FVQAIVTGKGP+ENL DHLADP NNAWAYATNF
Sbjct: 101 FVQAIVTGKGPIENLYDHLADPSTNNAWAYATNF 134
>gi|226492741|ref|NP_001148271.1| chlorophyll a-b binding protein [Zea mays]
gi|195617084|gb|ACG30372.1| chlorophyll a-b binding protein [Zea mays]
gi|238006080|gb|ACR34075.1| unknown [Zea mays]
gi|414871640|tpg|DAA50197.1| TPA: type II light-harvesting chlorophyll a /b-binding protein
isoform 1 [Zea mays]
gi|414871641|tpg|DAA50198.1| TPA: type II light-harvesting chlorophyll a /b-binding protein
isoform 2 [Zea mays]
gi|414871644|tpg|DAA50201.1| TPA: light harvesting chlorophyll binding protein9 isoform 1 [Zea
mays]
gi|414871645|tpg|DAA50202.1| TPA: light harvesting chlorophyll binding protein9 isoform 2 [Zea
mays]
Length = 260
Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/97 (83%), Positives = 88/97 (90%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE D +YPGG+FDPLGLADDP+ AELKVKE+KNGRLAMFSMFGF
Sbjct: 163 MGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTAAELKVKELKNGRLAMFSMFGF 222
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPG
Sbjct: 223 FVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPG 259
>gi|195618248|gb|ACG30954.1| chlorophyll a-b binding protein [Zea mays]
Length = 260
Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 81/97 (83%), Positives = 88/97 (90%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE D +YPGG+FDPLGLADDP+ AELKVKE+KNGRLAMFSMFGF
Sbjct: 163 MGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTAAELKVKELKNGRLAMFSMFGF 222
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPG
Sbjct: 223 FVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPG 259
>gi|242038937|ref|XP_002466863.1| hypothetical protein SORBIDRAFT_01g015400 [Sorghum bicolor]
gi|241920717|gb|EER93861.1| hypothetical protein SORBIDRAFT_01g015400 [Sorghum bicolor]
Length = 262
Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 81/97 (83%), Positives = 88/97 (90%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE D +YPGG+FDPLGLADDP+ AELKVKE+KNGRLAMFSMFGF
Sbjct: 165 MGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTAAELKVKELKNGRLAMFSMFGF 224
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPG
Sbjct: 225 FVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPG 261
>gi|3386569|gb|AAC28490.1| photosystem II type II chlorophyll a/b binding protein [Sorghum
bicolor]
Length = 191
Score = 168 bits (425), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 81/98 (82%), Positives = 88/98 (89%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE D +YPGG+FDPLGLADDP+ AELKVKE+KNGRLAMFSMFGF
Sbjct: 94 MGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTAAELKVKELKNGRLAMFSMFGF 153
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPG
Sbjct: 154 FVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGN 191
>gi|77799163|gb|ABB03724.1| putative chloroplast chlorophyll A-B binding protein type II
[Sorghum bicolor]
Length = 113
Score = 168 bits (425), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 81/97 (83%), Positives = 88/97 (90%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE D +YPGG+FDPLGLADDP+ AELKVKE+KNGRLAMFSMFGF
Sbjct: 16 MGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTAAELKVKELKNGRLAMFSMFGF 75
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPG
Sbjct: 76 FVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPG 112
>gi|357121229|ref|XP_003562323.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Brachypodium distachyon]
Length = 263
Score = 167 bits (424), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 79/98 (80%), Positives = 88/98 (89%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE D +YPGG+FDPLGLADDP+ AELKVKE+KNGRLAMFSMFGF
Sbjct: 166 MGFIEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPDTAAELKVKELKNGRLAMFSMFGF 225
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DH+ADPVNNNAWA+ATNF PG
Sbjct: 226 FVQAIVTGKGPVENLFDHVADPVNNNAWAFATNFAPGS 263
>gi|302810440|ref|XP_002986911.1| light-harvesting complex [Selaginella moellendorffii]
gi|300145316|gb|EFJ11993.1| light-harvesting complex [Selaginella moellendorffii]
Length = 267
Score = 167 bits (424), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 79/98 (80%), Positives = 86/98 (87%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+ GGPLGE D +YPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
F QAIVTGKGP+ENL DHL +P NNAWAYATNF PG
Sbjct: 230 FTQAIVTGKGPIENLLDHLDNPTVNNAWAYATNFTPGS 267
>gi|13265505|gb|AAG40044.2|AF324693_1 At2g34430 [Arabidopsis thaliana]
Length = 268
Score = 167 bits (423), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 83/96 (86%), Positives = 87/96 (90%), Gaps = 1/96 (1%)
Query: 4 VEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 62
+ R+ G GPLGE D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFV
Sbjct: 173 LRATRVPGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFV 232
Query: 63 QAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
QAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 233 QAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 268
>gi|326510279|dbj|BAJ87356.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 219
Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/98 (80%), Positives = 88/98 (89%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE D +YPGG+FDPLGLADDP+ AELKVKE+KNGRLAMFSMFGF
Sbjct: 122 MGFIEGYRVGGGPLGEGLDIIYPGGAFDPLGLADDPDTAAELKVKELKNGRLAMFSMFGF 181
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DH+ADPVNNNAWA+ATNF PG
Sbjct: 182 FVQAIVTGKGPVENLFDHIADPVNNNAWAFATNFAPGS 219
>gi|20269804|gb|AAM18057.1|AF495473_1 major light-harvesting complex II protein m1 [Chlamydomonas
reinhardtii]
gi|15430558|dbj|BAB64414.1| light-harvesting chlorophyll-a/b binding protein LhcII-4
[Chlamydomonas reinhardtii]
gi|15430566|dbj|BAB64418.1| light-harvesting chlorophyll-a/b binding protein LhcII-4
[Chlamydomonas reinhardtii]
gi|27542565|gb|AAO16493.1| light-harvesting complex II protein [Chlamydomonas reinhardtii]
Length = 256
Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/96 (83%), Positives = 87/96 (90%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYR+ GGPLGE D LYPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 160 MGAIEGYRVNGGPLGEGLDKLYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 219
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGPL+NL+DHLA+P NNA+AYAT F P
Sbjct: 220 FVQAIVTGKGPLQNLSDHLANPGTNNAFAYATKFTP 255
>gi|351066141|gb|AEQ39045.1| putative light-harvesting complex II chlorophyll-a/b binding
protein [Wolffia arrhiza]
Length = 84
Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/84 (96%), Positives = 82/84 (97%)
Query: 15 GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 74
GEVTDPLYPGGSFDPL LA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN
Sbjct: 1 GEVTDPLYPGGSFDPLNLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 60
Query: 75 LADHLADPVNNNAWAYATNFVPGK 98
LADHLADPVNNNAWAYATNFVPG
Sbjct: 61 LADHLADPVNNNAWAYATNFVPGN 84
>gi|125620170|gb|ABN46977.1| chlorophyll a/b-binding protein [Nelumbo nucifera]
Length = 269
Score = 166 bits (419), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/96 (83%), Positives = 86/96 (89%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYRI+GGPLGE TDPLYPGG+FDPL LADDPE FA LKVKEIKNGRLAMF+M GF
Sbjct: 171 MGAIEGYRISGGPLGEPTDPLYPGGNFDPLHLADDPEEFAILKVKEIKNGRLAMFAMLGF 230
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
+VQAIVTGKGPLENL DHLADP NNAWA+AT F P
Sbjct: 231 YVQAIVTGKGPLENLYDHLADPFKNNAWAFATAFDP 266
>gi|53627206|gb|AAU89254.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus merkusii]
Length = 256
Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/83 (96%), Positives = 83/83 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 174 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGF 233
Query: 61 FVQAIVTGKGPLENLADHLADPV 83
FVQAIVTGKGP+ENLADHLADPV
Sbjct: 234 FVQAIVTGKGPIENLADHLADPV 256
>gi|53627202|gb|AAU89252.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus radiata]
Length = 256
Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/83 (96%), Positives = 83/83 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 174 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGF 233
Query: 61 FVQAIVTGKGPLENLADHLADPV 83
FVQAIVTGKGP+ENLADHLADPV
Sbjct: 234 FVQAIVTGKGPIENLADHLADPV 256
>gi|53627220|gb|AAU89261.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus monophylla]
Length = 256
Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/83 (96%), Positives = 83/83 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 174 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGF 233
Query: 61 FVQAIVTGKGPLENLADHLADPV 83
FVQAIVTGKGP+ENLADHLADPV
Sbjct: 234 FVQAIVTGKGPIENLADHLADPV 256
>gi|87313225|gb|ABD37909.1| light-harvesting chlorophyll-a/b binding protein LhcbM1
[Chlamydomonas incerta]
Length = 249
Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/96 (82%), Positives = 87/96 (90%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYR+ GGPLGE D LYPGGSFDPLGLADDP+ F+ELKVKEIKNGRLAMFSMFGF
Sbjct: 153 MGAIEGYRVNGGPLGEGLDKLYPGGSFDPLGLADDPDTFSELKVKEIKNGRLAMFSMFGF 212
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGPL+NL+DHLA+P NNA+AYAT F P
Sbjct: 213 FVQAIVTGKGPLQNLSDHLANPGTNNAFAYATKFTP 248
>gi|53627226|gb|AAU89264.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus nelsonii]
Length = 256
Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/83 (96%), Positives = 83/83 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 174 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGF 233
Query: 61 FVQAIVTGKGPLENLADHLADPV 83
FVQAIVTGKGP+ENLADHLADPV
Sbjct: 234 FVQAIVTGKGPIENLADHLADPV 256
>gi|53627222|gb|AAU89262.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus remota]
Length = 256
Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/83 (96%), Positives = 83/83 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 174 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGF 233
Query: 61 FVQAIVTGKGPLENLADHLADPV 83
FVQAIVTGKGP+ENLADHLADPV
Sbjct: 234 FVQAIVTGKGPIENLADHLADPV 256
>gi|53627224|gb|AAU89263.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus longaeva]
Length = 253
Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/83 (96%), Positives = 83/83 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 171 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGF 230
Query: 61 FVQAIVTGKGPLENLADHLADPV 83
FVQAIVTGKGP+ENLADHLADPV
Sbjct: 231 FVQAIVTGKGPIENLADHLADPV 253
>gi|302833824|ref|XP_002948475.1| hypothetical protein VOLCADRAFT_73821 [Volvox carteri f.
nagariensis]
gi|300266162|gb|EFJ50350.1| hypothetical protein VOLCADRAFT_73821 [Volvox carteri f.
nagariensis]
Length = 257
Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 80/96 (83%), Positives = 87/96 (90%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYR+ GGPLGE D LYPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 160 MGAIEGYRVNGGPLGEGLDKLYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 219
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGPL+NL+DHLA+P NNA+AYAT F P
Sbjct: 220 FVQAIVTGKGPLQNLSDHLANPGVNNAFAYATKFTP 255
>gi|53627210|gb|AAU89256.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus chiapensis]
Length = 256
Score = 164 bits (414), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 79/83 (95%), Positives = 83/83 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 174 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF 233
Query: 61 FVQAIVTGKGPLENLADHLADPV 83
FVQAIVTGKGP+ENLADHLADPV
Sbjct: 234 FVQAIVTGKGPIENLADHLADPV 256
>gi|53627212|gb|AAU89257.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus flexilis]
gi|53627214|gb|AAU89258.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus lambertiana]
gi|53627216|gb|AAU89259.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus monticola]
gi|53627218|gb|AAU89260.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus strobus]
Length = 256
Score = 164 bits (414), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 79/83 (95%), Positives = 83/83 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 174 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF 233
Query: 61 FVQAIVTGKGPLENLADHLADPV 83
FVQAIVTGKGP+ENLADHLADPV
Sbjct: 234 FVQAIVTGKGPIENLADHLADPV 256
>gi|145079054|tpg|DAA05896.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm13 [Acetabularia acetabulum]
Length = 255
Score = 163 bits (413), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 76/97 (78%), Positives = 85/97 (87%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+E YR+ GGPLGE DPLYPG FDPLGLADDP+ FAELK+KEIKNGRLAMFSMFGF
Sbjct: 157 MGAIEAYRVNGGPLGEGLDPLYPGDKFDPLGLADDPDTFAELKIKEIKNGRLAMFSMFGF 216
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQA+VTGKGP+EN A+H+ADP + NAW YAT FVPG
Sbjct: 217 FVQAVVTGKGPIENWAEHVADPFSVNAWNYATKFVPG 253
>gi|53627200|gb|AAU89251.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus ponderosa]
Length = 256
Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/83 (95%), Positives = 82/83 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLG VTDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 174 MGAVEGYRIAGGPLGXVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGF 233
Query: 61 FVQAIVTGKGPLENLADHLADPV 83
FVQAIVTGKGP+ENLADHLADPV
Sbjct: 234 FVQAIVTGKGPIENLADHLADPV 256
>gi|302854483|ref|XP_002958749.1| hypothetical protein VOLCADRAFT_108288 [Volvox carteri f.
nagariensis]
gi|300255924|gb|EFJ40205.1| hypothetical protein VOLCADRAFT_108288 [Volvox carteri f.
nagariensis]
Length = 2775
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 77/94 (81%), Positives = 83/94 (88%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 2673 MGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 2732
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 94
FVQAIVTGKGP+ENL DHLA+P NNA+A+AT F
Sbjct: 2733 FVQAIVTGKGPIENLNDHLANPAVNNAFAFATKF 2766
>gi|53627208|gb|AAU89255.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus roxburghii]
Length = 256
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/83 (95%), Positives = 82/83 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPL LADDP+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 174 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLRLADDPDAFAELKVKEIKNGRLAMFSMFGF 233
Query: 61 FVQAIVTGKGPLENLADHLADPV 83
FVQAIVTGKGP+ENLADHLADPV
Sbjct: 234 FVQAIVTGKGPIENLADHLADPV 256
>gi|53627204|gb|AAU89253.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus contorta]
Length = 256
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/83 (95%), Positives = 82/83 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPL EVTDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 174 MGAVEGYRIAGGPLREVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGF 233
Query: 61 FVQAIVTGKGPLENLADHLADPV 83
FVQAIVTGKGP+ENLADHLADPV
Sbjct: 234 FVQAIVTGKGPIENLADHLADPV 256
>gi|2570513|gb|AAB82142.1| chlorophyll a-b binding protein [Oryza sativa Indica Group]
Length = 263
Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 77/98 (78%), Positives = 84/98 (85%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE D +YPGG+FD LGLA+DP+ FAE KVKE NGRLAMFSM GF
Sbjct: 166 MGFVEGYRVGGGPLGEGLDKVYPGGAFDHLGLAEDPDTFAEFKVKEFNNGRLAMFSMLGF 225
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+EN DH+ADPV NNAWAYATNFVPGK
Sbjct: 226 FVQAIVTGKGPIENFFDHVADPVANNAWAYATNFVPGK 263
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 12 GPLGEVTDPLYPGGSF------DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 65
GP E T P Y G F D GL+ DPE FA + E+ + R AM G F I
Sbjct: 57 GPFSEQT-PSYLTGKFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCFFPEI 115
Query: 66 VTGKG 70
++ G
Sbjct: 116 LSKNG 120
>gi|145079233|tpg|DAA05905.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm12 [Acetabularia acetabulum]
Length = 255
Score = 160 bits (406), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 74/97 (76%), Positives = 85/97 (87%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+E YR+ GGPLGE DPLYPG FDPLGLADDP+ FAELK+KEIKNGRLAMFSMFGF
Sbjct: 157 MGAIEAYRVNGGPLGEGLDPLYPGDKFDPLGLADDPDTFAELKIKEIKNGRLAMFSMFGF 216
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
+VQA+VTGKGP+EN A+H+A+P + NAW YAT FVPG
Sbjct: 217 YVQAVVTGKGPIENWAEHVANPFSVNAWNYATKFVPG 253
>gi|87313209|gb|ABD37901.1| light-harvesting chlorophyll-a/b binding protein LhcbM4
[Acutodesmus obliquus]
Length = 255
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/97 (79%), Positives = 83/97 (85%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGP GE DPLYPG +FDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 158 MGLVEGYRVNGGPAGEGLDPLYPGEAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 217
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTG+GP+ NL HL+DP NNAW YAT FVPG
Sbjct: 218 FVQAIVTGQGPIANLDAHLSDPSGNNAWNYATKFVPG 254
>gi|302840684|ref|XP_002951894.1| hypothetical protein VOLCADRAFT_81675 [Volvox carteri f.
nagariensis]
gi|300262795|gb|EFJ46999.1| hypothetical protein VOLCADRAFT_81675 [Volvox carteri f.
nagariensis]
Length = 255
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/96 (81%), Positives = 84/96 (87%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 158 MGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 217
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP+ENL DHLA+P NNA+A+AT F P
Sbjct: 218 FVQAIVTGKGPIENLNDHLANPAVNNAFAFATKFTP 253
>gi|302832904|ref|XP_002948016.1| hypothetical protein VOLCADRAFT_79865 [Volvox carteri f.
nagariensis]
gi|300266818|gb|EFJ51004.1| hypothetical protein VOLCADRAFT_79865 [Volvox carteri f.
nagariensis]
Length = 254
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/96 (81%), Positives = 84/96 (87%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 157 MGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 216
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP+ENL DHLA+P NNA+A+AT F P
Sbjct: 217 FVQAIVTGKGPIENLNDHLANPAVNNAFAFATKFTP 252
>gi|302856312|ref|XP_002959561.1| hypothetical protein VOLCADRAFT_78398 [Volvox carteri f.
nagariensis]
gi|302856626|ref|XP_002959664.1| hypothetical protein VOLCADRAFT_108699 [Volvox carteri f.
nagariensis]
gi|300254677|gb|EFJ39271.1| hypothetical protein VOLCADRAFT_108699 [Volvox carteri f.
nagariensis]
gi|300254888|gb|EFJ39374.1| hypothetical protein VOLCADRAFT_78398 [Volvox carteri f.
nagariensis]
Length = 254
Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/96 (81%), Positives = 84/96 (87%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 157 MGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 216
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP+ENL DHLA+P NNA+A+AT F P
Sbjct: 217 FVQAIVTGKGPIENLNDHLANPAVNNAFAFATKFTP 252
>gi|302854172|ref|XP_002958596.1| hypothetical protein VOLCADRAFT_84524 [Volvox carteri f.
nagariensis]
gi|300256057|gb|EFJ40333.1| hypothetical protein VOLCADRAFT_84524 [Volvox carteri f.
nagariensis]
Length = 254
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/96 (81%), Positives = 84/96 (87%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 157 MGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 216
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP+ENL DHLA+P NNA+A+AT F P
Sbjct: 217 FVQAIVTGKGPIENLNDHLANPAVNNAFAFATKFTP 252
>gi|302854487|ref|XP_002958751.1| hypothetical protein VOLCADRAFT_84624 [Volvox carteri f.
nagariensis]
gi|302854497|ref|XP_002958756.1| hypothetical protein VOLCADRAFT_78096 [Volvox carteri f.
nagariensis]
gi|300255926|gb|EFJ40207.1| hypothetical protein VOLCADRAFT_84624 [Volvox carteri f.
nagariensis]
gi|300255931|gb|EFJ40212.1| hypothetical protein VOLCADRAFT_78096 [Volvox carteri f.
nagariensis]
Length = 98
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/96 (81%), Positives = 84/96 (87%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 1 MGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 60
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP+ENL DHLA+P NNA+A+AT F P
Sbjct: 61 FVQAIVTGKGPIENLNDHLANPAVNNAFAFATKFTP 96
>gi|302851938|ref|XP_002957491.1| hypothetical protein VOLCADRAFT_84135 [Volvox carteri f.
nagariensis]
gi|300257133|gb|EFJ41385.1| hypothetical protein VOLCADRAFT_84135 [Volvox carteri f.
nagariensis]
Length = 254
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/96 (81%), Positives = 84/96 (87%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 157 MGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 216
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP+ENL DHLA+P NNA+A+AT F P
Sbjct: 217 FVQAIVTGKGPIENLNDHLANPAVNNAFAFATKFTP 252
>gi|53627198|gb|AAU89250.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus echinata]
Length = 253
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/80 (96%), Positives = 80/80 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 174 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGF 233
Query: 61 FVQAIVTGKGPLENLADHLA 80
FVQAIVTGKGP+ENLADHLA
Sbjct: 234 FVQAIVTGKGPIENLADHLA 253
>gi|159491492|ref|XP_001703699.1| light-harvesting complex II chlorophyll a-b binding protein M3
[Chlamydomonas reinhardtii]
gi|15430554|dbj|BAB64412.1| light-harvesting chlorophyll-a/b binding protein LhcII-1.3
[Chlamydomonas reinhardtii]
gi|15430562|dbj|BAB64416.1| light-harvesting chlorophyll-a/b binding protein LhcII-1.3
[Chlamydomonas reinhardtii]
gi|158270548|gb|EDO96390.1| light-harvesting complex II chlorophyll a-b binding protein M3
[Chlamydomonas reinhardtii]
Length = 257
Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/96 (79%), Positives = 84/96 (87%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 160 MGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 219
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP++NL DHL++P NNA+A+AT F P
Sbjct: 220 FVQAIVTGKGPIQNLDDHLSNPTVNNAFAFATKFTP 255
>gi|115826|sp|P22686.1|CB2_CHLMO RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|18063|emb|CAA38635.1| chlorophyll a/b-binding protein [Chlamydomonas moewusii]
Length = 256
Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/96 (80%), Positives = 83/96 (86%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMFS FGF
Sbjct: 159 MGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGF 218
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP++NLADHLADP NNA+A AT F P
Sbjct: 219 FVQAIVTGKGPIQNLADHLADPGTNNAFAAATKFTP 254
>gi|67772801|gb|AAY81729.1| chloroplast putative light harvesting chlorophyll a/b binding
protein, partial [Pinus gerardiana]
Length = 253
Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/80 (96%), Positives = 80/80 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 174 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGF 233
Query: 61 FVQAIVTGKGPLENLADHLA 80
FVQAIVTGKGP+ENLADHLA
Sbjct: 234 FVQAIVTGKGPIENLADHLA 253
>gi|449527137|ref|XP_004170569.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like,
partial [Cucumis sativus]
Length = 79
Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/79 (96%), Positives = 78/79 (98%)
Query: 20 PLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
P+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHL
Sbjct: 1 PIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 60
Query: 80 ADPVNNNAWAYATNFVPGK 98
DPVNNNAWAYATNFVPGK
Sbjct: 61 TDPVNNNAWAYATNFVPGK 79
>gi|19423285|gb|AAL88456.1|AF479777_1 major light-harvesting complex II protein m10 [Chlamydomonas
reinhardtii]
Length = 256
Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/96 (79%), Positives = 84/96 (87%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 159 MGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 218
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP++NL DHL++P NNA+A+AT F P
Sbjct: 219 FVQAIVTGKGPIQNLDDHLSNPTVNNAFAFATKFTP 254
>gi|74272671|gb|ABA01131.1| chloroplast light-harvesting chlorophyll-a/b binding protein
[Chlamydomonas incerta]
Length = 257
Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/96 (79%), Positives = 84/96 (87%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 160 MGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 219
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP++NL DHL++P NNA+A+AT F P
Sbjct: 220 FVQAIVTGKGPVQNLDDHLSNPTVNNAFAFATKFTP 255
>gi|159474462|ref|XP_001695344.1| chloropyll a-b binding protein of LHCII [Chlamydomonas reinhardtii]
gi|158275827|gb|EDP01602.1| chloropyll a-b binding protein of LHCII [Chlamydomonas reinhardtii]
Length = 254
Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/96 (79%), Positives = 84/96 (87%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 157 MGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 216
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP++NL DHLA+P NNA+A+AT F P
Sbjct: 217 FVQAIVTGKGPVQNLDDHLANPTVNNAFAFATKFTP 252
>gi|159474480|ref|XP_001695353.1| chloropyll a-b binding protein of LHCII type I, chloroplast
precursor [Chlamydomonas reinhardtii]
gi|158275836|gb|EDP01611.1| chloropyll a-b binding protein of LHCII type I, chloroplast
precursor [Chlamydomonas reinhardtii]
Length = 253
Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/96 (79%), Positives = 84/96 (87%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 156 MGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 215
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP++NL DHLA+P NNA+A+AT F P
Sbjct: 216 FVQAIVTGKGPVQNLDDHLANPTVNNAFAFATKFTP 251
>gi|145079118|tpg|DAA05899.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm9 [Acetabularia acetabulum]
Length = 229
Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/96 (78%), Positives = 82/96 (85%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +E YR+ GGPLGE DPL+PG FDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 133 MGLIEAYRVNGGPLGEGLDPLHPGDKFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 192
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
+VQAIVTGKGP+EN ADH+ADP N AW YAT FVP
Sbjct: 193 YVQAIVTGKGPIENWADHVADPFNVTAWNYATKFVP 228
>gi|209778997|gb|ACI87809.1| putative chloroplast chlorophyll a/b-binding protein [Cupressus
sempervirens]
Length = 85
Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 77/85 (90%), Positives = 79/85 (92%)
Query: 14 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 73
L E DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+E
Sbjct: 1 LAEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIE 60
Query: 74 NLADHLADPVNNNAWAYATNFVPGK 98
NL DHLADP NNAWAYATNFVPGK
Sbjct: 61 NLYDHLADPSTNNAWAYATNFVPGK 85
>gi|19423289|gb|AAL88458.1|AF479779_1 major light-harvesting complex II protein m7 [Chlamydomonas
reinhardtii]
Length = 258
Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/96 (79%), Positives = 84/96 (87%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 161 MGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 220
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP++NL DHL++P NNA+A+AT F P
Sbjct: 221 FVQAIVTGKGPIQNLDDHLSNPTVNNAFAFATKFTP 256
>gi|87313235|gb|ABD37914.1| light-harvesting chlorophyll-a/b binding protein LhcbM9
[Chlamydomonas incerta]
Length = 254
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/96 (78%), Positives = 84/96 (87%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGF
Sbjct: 157 MGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGF 216
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP++NL DHLA+P NNA+A+AT F P
Sbjct: 217 FVQAIVTGKGPVQNLDDHLANPTVNNAFAFATKFTP 252
>gi|159474708|ref|XP_001695467.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
gi|158275950|gb|EDP01725.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
Length = 254
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/96 (79%), Positives = 84/96 (87%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 157 MGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 216
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP++NL DHLA+P NNA+A+AT F P
Sbjct: 217 FVQAIVTGKGPVQNLDDHLANPGVNNAFAFATKFTP 252
>gi|225690804|gb|ACO06088.1| chlorophyll a-b binding protein [Triticum aestivum]
Length = 263
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/98 (76%), Positives = 84/98 (85%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPL E D +YPGG+FDPLGLADDP+ AELKVKE+KNGRLAMFSMFGF
Sbjct: 166 MGFIEGYRVGGGPLDEGLDIIYPGGAFDPLGLADDPDTAAELKVKELKNGRLAMFSMFGF 225
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL D L DP NNNAWA+AT+F PG
Sbjct: 226 FVQAIVTGKGPVENLFDQLRDPGNNNAWAFATHFCPGS 263
>gi|3928891|gb|AAC79711.1| chlorophyll a/b binding protein [Acetabularia acetabulum]
Length = 251
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/96 (76%), Positives = 83/96 (86%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELK+KEIKNGRLAMFSMFGF
Sbjct: 154 MGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKIKEIKNGRLAMFSMFGF 213
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
+VQAIVTGKGP+EN A+H+ADP NA++YAT F P
Sbjct: 214 YVQAIVTGKGPVENWAEHIADPFTANAFSYATKFTP 249
>gi|115828|sp|P20865.1|CB2_DUNSA RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|167987|gb|AAA33278.1| major chlorophyll binding protein [Dunaliella salina]
Length = 273
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/96 (78%), Positives = 82/96 (85%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGP GE DPLYPG +FDPLGLADDP+ FAELKVKEIKNGRLAMF+ GF
Sbjct: 177 MGLVEGYRVNGGPAGEGLDPLYPGEAFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGF 236
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP+ENL DHLA+P NNA+AYAT F P
Sbjct: 237 FVQAIVTGKGPIENLTDHLANPAENNAFAYATKFTP 272
>gi|302842321|ref|XP_002952704.1| light-harvesting chlorophyll a/b-binding protein [Volvox carteri f.
nagariensis]
gi|300262048|gb|EFJ46257.1| light-harvesting chlorophyll a/b-binding protein [Volvox carteri f.
nagariensis]
Length = 251
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/96 (79%), Positives = 83/96 (86%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG E YR GGPLGE DPL+PGG+FDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 154 MGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 213
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP+ENL+DHLA+P NA+AYAT F P
Sbjct: 214 FVQAIVTGKGPIENLSDHLANPSAVNAFAYATKFTP 249
>gi|302840162|ref|XP_002951637.1| hypothetical protein VOLCADRAFT_109135 [Volvox carteri f.
nagariensis]
gi|300263246|gb|EFJ47448.1| hypothetical protein VOLCADRAFT_109135 [Volvox carteri f.
nagariensis]
Length = 251
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/96 (79%), Positives = 83/96 (86%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG E YR GGPLGE DPL+PGG+FDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 154 MGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 213
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP+ENL+DHLA+P NA+AYAT F P
Sbjct: 214 FVQAIVTGKGPIENLSDHLANPSAVNAFAYATKFTP 249
>gi|302842165|ref|XP_002952626.1| hypothetical protein VOLCADRAFT_81918 [Volvox carteri f.
nagariensis]
gi|300261970|gb|EFJ46179.1| hypothetical protein VOLCADRAFT_81918 [Volvox carteri f.
nagariensis]
Length = 251
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/96 (79%), Positives = 83/96 (86%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG E YR GGPLGE DPL+PGG+FDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 154 MGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 213
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP+ENL+DHLA+P NA+AYAT F P
Sbjct: 214 FVQAIVTGKGPIENLSDHLANPSAVNAFAYATKFTP 249
>gi|302849646|ref|XP_002956352.1| hypothetical protein VOLCADRAFT_77072 [Volvox carteri f.
nagariensis]
gi|300258258|gb|EFJ42496.1| hypothetical protein VOLCADRAFT_77072 [Volvox carteri f.
nagariensis]
Length = 250
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/96 (79%), Positives = 83/96 (86%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG E YR GGPLGE DPL+PGG+FDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 153 MGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 212
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP+ENL+DHLA+P NA+AYAT F P
Sbjct: 213 FVQAIVTGKGPIENLSDHLANPSAVNAFAYATKFTP 248
>gi|55668304|gb|AAV54188.1| chloroplast major light-harvesting complex II protein m9
[Haematococcus pluvialis]
Length = 152
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/96 (78%), Positives = 83/96 (86%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGP GE DPLYPG +FDPLGLADDP+ FAELKVKEIKNGRLAMFS FGF
Sbjct: 56 MGLVEGYRMNGGPAGEGLDPLYPGEAFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGF 115
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP++NL DHLA+P NNA+A+AT F P
Sbjct: 116 FVQAIVTGKGPIQNLTDHLANPAENNAFAFATKFTP 151
>gi|302835026|ref|XP_002949075.1| hypothetical protein VOLCADRAFT_80470 [Volvox carteri f.
nagariensis]
gi|300265820|gb|EFJ50010.1| hypothetical protein VOLCADRAFT_80470 [Volvox carteri f.
nagariensis]
Length = 252
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/96 (79%), Positives = 83/96 (86%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG E YR GGPLGE DPL+PGG+FDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 155 MGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 214
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP+ENL+DHLA+P NA+AYAT F P
Sbjct: 215 FVQAIVTGKGPIENLSDHLANPSAVNAFAYATKFTP 250
>gi|115827|sp|P14273.1|CB2_CHLRE RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|20269802|gb|AAM18056.1|AF495472_1 major light-harvesting complex II protein m6 [Chlamydomonas
reinhardtii]
gi|167409|gb|AAA33082.1| chlorophyll a/b-binding protein [Chlamydomonas reinhardtii]
Length = 253
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/96 (78%), Positives = 83/96 (86%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLA FSMFGF
Sbjct: 156 MGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLASFSMFGF 215
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP++NL DHLA+P NNA+A+AT F P
Sbjct: 216 FVQAIVTGKGPVQNLDDHLANPTVNNAFAFATKFTP 251
>gi|145079419|tpg|DAA05914.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm2 [Acetabularia acetabulum]
Length = 248
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/96 (76%), Positives = 83/96 (86%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELK+KEIKNGRLAMFSMFGF
Sbjct: 151 MGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKIKEIKNGRLAMFSMFGF 210
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
+VQAIVTGKGP+EN A+H+ADP NA++YAT F P
Sbjct: 211 YVQAIVTGKGPVENWAEHVADPFTANAFSYATKFTP 246
>gi|302842163|ref|XP_002952625.1| hypothetical protein VOLCADRAFT_102070 [Volvox carteri f.
nagariensis]
gi|300261969|gb|EFJ46178.1| hypothetical protein VOLCADRAFT_102070 [Volvox carteri f.
nagariensis]
Length = 270
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/96 (79%), Positives = 83/96 (86%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG E YR GGPLGE DPL+PGG+FDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 173 MGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 232
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP+ENL+DHLA+P NA+AYAT F P
Sbjct: 233 FVQAIVTGKGPIENLSDHLANPSAVNAFAYATKFTP 268
>gi|145079101|tpg|DAA05898.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm1 [Acetabularia acetabulum]
Length = 198
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/96 (76%), Positives = 83/96 (86%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELK+KEIKNGRLAMFSMFGF
Sbjct: 101 MGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKIKEIKNGRLAMFSMFGF 160
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
+VQAIVTGKGP+EN A+H+ADP NA++YAT F P
Sbjct: 161 YVQAIVTGKGPVENWAEHVADPFTANAFSYATKFTP 196
>gi|53627228|gb|AAU89265.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Picea sitchensis]
Length = 253
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/80 (92%), Positives = 79/80 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGE+TDP+YPGGSFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 174 MGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF 233
Query: 61 FVQAIVTGKGPLENLADHLA 80
F QAIVTGKGP+ENLADHLA
Sbjct: 234 FXQAIVTGKGPIENLADHLA 253
>gi|168998334|gb|ACA42563.1| hypothetical protein [Camellia sinensis]
Length = 81
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/98 (82%), Positives = 81/98 (82%), Gaps = 17/98 (17%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDPLYP ELKVKEIKNGRLAMFSMFGF
Sbjct: 1 MGAVEGYRIAGGPLGEVTDPLYP-----------------ELKVKEIKNGRLAMFSMFGF 43
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 44 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 81
>gi|302854499|ref|XP_002958757.1| hypothetical protein VOLCADRAFT_108301 [Volvox carteri f.
nagariensis]
gi|300255932|gb|EFJ40213.1| hypothetical protein VOLCADRAFT_108301 [Volvox carteri f.
nagariensis]
Length = 112
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/94 (79%), Positives = 81/94 (86%)
Query: 3 AVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 62
A GYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGFFV
Sbjct: 17 AAHGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFV 76
Query: 63 QAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
QAIVTGKGP+ENL DHLA+P NNA+A+AT F P
Sbjct: 77 QAIVTGKGPIENLNDHLANPAVNNAFAFATKFTP 110
>gi|115831|sp|P15773.1|CB2_MALDO RecName: Full=Chlorophyll a-b binding protein AB10, chloroplastic;
AltName: Full=LHCII type I CAB-AB10; Short=LHCP; Flags:
Precursor
gi|19541|emb|CAA35690.1| unnamed protein product [Malus x domestica]
Length = 268
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/97 (82%), Positives = 84/97 (86%), Gaps = 1/97 (1%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIA GPLGEVTDPLYPG SFD LGLA+D EAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 172 MGAVEGYRIARGPLGEVTDPLYPG-SFDSLGLAEDTEAFAELKVKELKNGRLAMFSMFGF 230
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIV+ K LENLADHL VNNNA + TNFVPG
Sbjct: 231 FVQAIVSRKDRLENLADHLGWTVNNNALSNVTNFVPG 267
>gi|67772803|gb|AAY81730.1| chloroplast putative light harvesting chlorophyll a/b binding
protein, partial [Pinus krempfii]
Length = 250
Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 74/78 (94%), Positives = 78/78 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGF
Sbjct: 173 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF 232
Query: 61 FVQAIVTGKGPLENLADH 78
FVQAIVTGKGP+ENLADH
Sbjct: 233 FVQAIVTGKGPIENLADH 250
>gi|384253340|gb|EIE26815.1| major light-harvesting complex II protein m10 [Coccomyxa
subellipsoidea C-169]
Length = 250
Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/96 (78%), Positives = 83/96 (86%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGP GE D LYPG +FDPLGLADDP+ FAEL+VKEIKNGRLAMFSMFGF
Sbjct: 154 MGLIEGYRVNGGPAGEGLDALYPGEAFDPLGLADDPDTFAELRVKEIKNGRLAMFSMFGF 213
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP+ENLADHLA+P NN +A AT FVP
Sbjct: 214 FVQAIVTGKGPIENLADHLANPSVNNGFAAATKFVP 249
>gi|169193|gb|AAA33700.1| Major Cab protein [Petunia x hybrida]
Length = 76
Score = 154 bits (389), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/76 (98%), Positives = 76/76 (100%)
Query: 23 PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 82
PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP
Sbjct: 1 PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 60
Query: 83 VNNNAWAYATNFVPGK 98
VNNNAW+YATNFVPGK
Sbjct: 61 VNNNAWSYATNFVPGK 76
>gi|145079335|tpg|DAA05910.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm6 [Acetabularia acetabulum]
Length = 244
Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 73/96 (76%), Positives = 82/96 (85%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +E YR+ GGPLGE D L+PG FDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 148 MGLIEAYRVNGGPLGEGLDVLHPGEKFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 207
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
+VQAIVTGKGP+EN A+H+ADP + NAW YAT FVP
Sbjct: 208 YVQAIVTGKGPIENWAEHVADPFSVNAWNYATKFVP 243
>gi|159471686|ref|XP_001693987.1| light-harvesting protein of photosystem II [Chlamydomonas
reinhardtii]
gi|15430556|dbj|BAB64413.1| light-harvesting chlorophyll-a/b binding protein LhcII-3
[Chlamydomonas reinhardtii]
gi|15430564|dbj|BAB64417.1| light-harvesting chlorophyll-a/b binding protein LhcII-3
[Chlamydomonas reinhardtii]
gi|158277154|gb|EDP02923.1| light-harvesting protein of photosystem II [Chlamydomonas
reinhardtii]
Length = 249
Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/96 (78%), Positives = 82/96 (85%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG E YR GGPLGE DPL+PGG+FDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 152 MGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 211
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP++NL DHLA+P NA+AYAT F P
Sbjct: 212 FVQAIVTGKGPIQNLDDHLANPTAVNAFAYATKFTP 247
>gi|145079356|tpg|DAA05911.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm5 [Acetabularia acetabulum]
Length = 244
Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 73/96 (76%), Positives = 82/96 (85%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +E YR+ GGPLGE D L+PG FDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 148 MGLIEAYRVNGGPLGEGLDVLHPGEKFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 207
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
+VQAIVTGKGP+EN A+H+ADP + NAW YAT FVP
Sbjct: 208 YVQAIVTGKGPIENWAEHVADPFSVNAWNYATKFVP 243
>gi|87313227|gb|ABD37910.1| light-harvesting chlorophyll-a/b binding protein LhcbM2a
[Chlamydomonas incerta]
Length = 246
Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/96 (78%), Positives = 82/96 (85%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG E YR GGPLGE DPL+PGG+FDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 149 MGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 208
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP++NL DHLA+P NA+AYAT F P
Sbjct: 209 FVQAIVTGKGPIQNLDDHLANPTAVNAFAYATKFTP 244
>gi|4139216|gb|AAD03731.1| light harvesting complex II protein precursor [Chlamydomonas
reinhardtii]
Length = 254
Score = 154 bits (388), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 75/96 (78%), Positives = 83/96 (86%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNG LAMFSMFGF
Sbjct: 157 MGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGALAMFSMFGF 216
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP++NL DHLA+P NNA+A+AT F P
Sbjct: 217 FVQAIVTGKGPVQNLDDHLANPGVNNAFAFATKFTP 252
>gi|159471942|ref|XP_001694115.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
gi|12658406|gb|AAK01125.1|AF330793_1 light-harvesting complex II protein precursor [Chlamydomonas
reinhardtii]
gi|158277282|gb|EDP03051.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
Length = 249
Score = 154 bits (388), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 75/96 (78%), Positives = 82/96 (85%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG E YR GGPLGE DPL+PGG+FDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 152 MGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 211
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP++NL DHLA+P NA+AYAT F P
Sbjct: 212 FVQAIVTGKGPIQNLDDHLANPTAVNAFAYATKFTP 247
>gi|87313229|gb|ABD37911.1| light-harvesting chlorophyll-a/b binding protein LhcbM2b
[Chlamydomonas incerta]
Length = 229
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/96 (78%), Positives = 82/96 (85%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG E YR GGPLGE DPL+PGG+FDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 132 MGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 191
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP++NL DHLA+P NA+AYAT F P
Sbjct: 192 FVQAIVTGKGPIQNLDDHLANPTAVNAFAYATKFTP 227
>gi|2407314|gb|AAB70556.1| chlorophyll a/b binding protein [Tetraselmis sp. RG-15]
Length = 251
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/97 (74%), Positives = 83/97 (85%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG E +R+ GGPLGE D L+PGG+FDPLGLADDP+ F+ELKVKEIKNGRLAMFSMFGF
Sbjct: 154 MGGAEAFRVNGGPLGEDLDKLHPGGAFDPLGLADDPDTFSELKVKEIKNGRLAMFSMFGF 213
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGP+EN A+H+ADP +N + YAT FVPG
Sbjct: 214 FVQAIVTGKGPVENWAEHIADPSGSNGFVYATKFVPG 250
>gi|145079437|tpg|DAA05915.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm7 [Acetabularia acetabulum]
Length = 244
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/96 (75%), Positives = 82/96 (85%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +E YR+ GGPLG+ D L+PG FDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 148 MGLIEAYRVNGGPLGKGLDVLHPGEKFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 207
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
+VQAIVTGKGP+EN A+H+ADP + NAW YAT FVP
Sbjct: 208 YVQAIVTGKGPIENWAEHVADPFSVNAWNYATKFVP 243
>gi|1262849|gb|AAB19041.1| type 1 light-harvesting chlorophyll a/b-binding polypeptide,
partial [Pinus palustris]
Length = 95
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/93 (82%), Positives = 79/93 (84%)
Query: 6 GYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 65
G G G P P GSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAI
Sbjct: 3 GLPYCGRSSGRGDRPHLPRGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAI 62
Query: 66 VTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
VTGKGP+ENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 63 VTGKGPIENLADHLADPVNNNAWAYATNFVPGK 95
>gi|87313211|gb|ABD37902.1| light-harvesting chlorophyll-a/b binding protein LhcbM5
[Acutodesmus obliquus]
Length = 250
Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/92 (79%), Positives = 79/92 (85%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGP GE DPLYPG +FDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 159 MGLVEGYRVNGGPAGEGLDPLYPGEAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 218
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYAT 92
FVQAIVTG+GP+ NL HL+DP NNAW YAT
Sbjct: 219 FVQAIVTGQGPIANLDAHLSDPSGNNAWNYAT 250
>gi|159474706|ref|XP_001695466.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
gi|19423287|gb|AAL88457.1|AF479778_1 major light-harvesting complex II protein m9 [Chlamydomonas
reinhardtii]
gi|158275949|gb|EDP01724.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
Length = 254
Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/96 (76%), Positives = 83/96 (86%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+G VEGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMFS FGF
Sbjct: 157 LGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSSFGF 216
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP++NL DHL++P NNA+A+AT + P
Sbjct: 217 FVQAIVTGKGPIQNLDDHLSNPGVNNAFAFATKYTP 252
>gi|87313181|gb|ABD37887.1| light-harvesting chlorophyll-a/b binding protein LhcbM3 [Mesostigma
viride]
gi|87313183|gb|ABD37888.1| light-harvesting chlorophyll-a/b binding protein LhcbM5 [Mesostigma
viride]
gi|87313185|gb|ABD37889.1| light-harvesting chlorophyll-a/b binding protein LhcbM4 [Mesostigma
viride]
gi|145079700|tpg|DAA05924.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm4 [Mesostigma viride]
gi|145079723|tpg|DAA05925.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm2 [Mesostigma viride]
gi|145079757|tpg|DAA05931.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm3 [Mesostigma viride]
Length = 267
Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/93 (77%), Positives = 80/93 (86%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE D +YPGGSFDPLGL DDP+ AELKVKEIKNGRLAMFSMFG+
Sbjct: 164 MGLVEGYRVGGGPLGEAGDKMYPGGSFDPLGLGDDPDTLAELKVKEIKNGRLAMFSMFGY 223
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATN 93
F+QAIVTGKGP+ENL HLADP NN +AYAT+
Sbjct: 224 FIQAIVTGKGPVENLDAHLADPFVNNGFAYATS 256
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 12 GPLGEVTDPL---YPGG-SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 62
GP +V L YPG +D +GL+ DPE FA + E+ + R AM G F+
Sbjct: 55 GPFTDVPSYLTGEYPGDYGWDTVGLSADPETFAAYREIELMHARWAMLGTLGCFL 109
>gi|87313177|gb|ABD37885.1| light-harvesting chlorophyll-a/b binding protein LhcbM1 [Mesostigma
viride]
gi|87313179|gb|ABD37886.1| light-harvesting chlorophyll-a/b binding protein LhcbM2 [Mesostigma
viride]
gi|145079623|tpg|DAA05921.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm1 [Mesostigma viride]
Length = 267
Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/93 (77%), Positives = 80/93 (86%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE D +YPGGSFDPLGL DDP+ AELKVKEIKNGRLAMFSMFG+
Sbjct: 164 MGLVEGYRVGGGPLGEAGDKMYPGGSFDPLGLGDDPDTLAELKVKEIKNGRLAMFSMFGY 223
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATN 93
F+QAIVTGKGP+ENL HLADP NN +AYAT+
Sbjct: 224 FIQAIVTGKGPVENLDAHLADPFVNNGFAYATS 256
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 12 GPLGEVTDPL---YPGG-SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 62
GP +V L YPG +D +GL+ DPE FA + E+ + R AM G F+
Sbjct: 55 GPFTDVPSYLTGEYPGDYGWDTVGLSADPETFAAYREIELMHARWAMLGTLGCFL 109
>gi|115472785|ref|NP_001059991.1| Os07g0562700 [Oryza sativa Japonica Group]
gi|34393384|dbj|BAC83393.1| putative chlorophyll A-B binding protein of LHCII type III,
chloroplast precursor (CAB) [Oryza sativa Japonica
Group]
gi|113611527|dbj|BAF21905.1| Os07g0562700 [Oryza sativa Japonica Group]
gi|125600722|gb|EAZ40298.1| hypothetical protein OsJ_24743 [Oryza sativa Japonica Group]
gi|215678934|dbj|BAG96364.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215679381|dbj|BAG96521.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215692555|dbj|BAG87975.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737394|dbj|BAG96323.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737576|dbj|BAG96706.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737599|dbj|BAG96729.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767446|dbj|BAG99674.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767453|dbj|BAG99681.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 266
Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/100 (81%), Positives = 83/100 (83%), Gaps = 3/100 (3%)
Query: 1 MGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEGYRI G P +G+ D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 168 MGLVEGYRINGLPGVGDGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 226
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
GFFVQAIVTGKGPLENL DHLADPV NNAW YAT F PG
Sbjct: 227 GFFVQAIVTGKGPLENLLDHLADPVANNAWVYATKFTPGS 266
>gi|87313231|gb|ABD37913.1| light-harvesting chlorophyll-a/b binding protein LhcbM8
[Chlamydomonas incerta]
Length = 245
Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/96 (76%), Positives = 83/96 (86%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+G VEGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMFS FGF
Sbjct: 148 LGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSSFGF 207
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP++NL DHL++P NNA+A+AT + P
Sbjct: 208 FVQAIVTGKGPIQNLDDHLSNPGVNNAFAFATKYTP 243
>gi|125558806|gb|EAZ04342.1| hypothetical protein OsI_26482 [Oryza sativa Indica Group]
Length = 266
Score = 151 bits (381), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/100 (81%), Positives = 83/100 (83%), Gaps = 3/100 (3%)
Query: 1 MGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEGYRI G P +G+ D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 168 MGLVEGYRINGLPGVGDGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 226
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
GFFVQAIVTGKGPLENL DHLADPV NNAW YAT F PG
Sbjct: 227 GFFVQAIVTGKGPLENLLDHLADPVANNAWVYATKFTPGS 266
>gi|168053612|ref|XP_001779229.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669328|gb|EDQ55917.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 266
Score = 151 bits (381), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 80/99 (80%), Positives = 85/99 (85%), Gaps = 3/99 (3%)
Query: 1 MGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MGAVE YR G P +GE D LYPGG FDPLGLADDPE AELKVKE+KNGRLAMFSMF
Sbjct: 168 MGAVEAYRTNGLPGVGEGGD-LYPGGKYFDPLGLADDPETLAELKVKELKNGRLAMFSMF 226
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
GFFVQAIVTGKGPLENL DHLA+PV+NNAWA+ATNF PG
Sbjct: 227 GFFVQAIVTGKGPLENLLDHLANPVSNNAWAFATNFTPG 265
>gi|359495474|ref|XP_003634999.1| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
[Vitis vinifera]
Length = 269
Score = 150 bits (380), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 82/100 (82%), Positives = 84/100 (84%), Gaps = 3/100 (3%)
Query: 1 MGAVEGYRIAGGP-LGEVTDPLYPGG-SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEGYRI G P +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 171 MGLVEGYRINGLPGVGEGND-LYPGGPYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 229
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
GFFVQAIVTGKGPLENL DHL +PV NNAWAYAT FVPG
Sbjct: 230 GFFVQAIVTGKGPLENLLDHLDNPVANNAWAYATKFVPGS 269
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 66
+D GL+ DPEAFA + E+ +GR AM FG ++
Sbjct: 81 WDTAGLSADPEAFARNRALEVIHGRWAMLGAFGCITPEVL 120
>gi|209868185|gb|ACI90632.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus tabuliformis var. henryi]
gi|209868187|gb|ACI90633.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus hwangshanensis]
gi|209868189|gb|ACI90634.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus tabuliformis]
Length = 254
Score = 150 bits (380), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/76 (96%), Positives = 76/76 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 179 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGF 238
Query: 61 FVQAIVTGKGPLENLA 76
FVQAIVTGKGP+ENLA
Sbjct: 239 FVQAIVTGKGPIENLA 254
>gi|209868191|gb|ACI90635.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus yunnanensis]
Length = 254
Score = 150 bits (380), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/76 (96%), Positives = 76/76 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 179 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGF 238
Query: 61 FVQAIVTGKGPLENLA 76
FVQAIVTGKGP+ENLA
Sbjct: 239 FVQAIVTGKGPIENLA 254
>gi|384253059|gb|EIE26534.1| chlorophyll a/b-binding protein P25 [Coccomyxa subellipsoidea
C-169]
Length = 234
Score = 150 bits (380), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 77/97 (79%), Positives = 82/97 (84%), Gaps = 1/97 (1%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MGA+EGYR+ GGP GE D +YPGG FDPLGLADDP+ FAELKVKEIKNGRLAMFSMFG
Sbjct: 138 MGAIEGYRVYGGPGGEGLDKVYPGGDYFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFG 197
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FFVQAIVTGKGPLENL HLADP NN +A AT FVP
Sbjct: 198 FFVQAIVTGKGPLENLESHLADPSVNNGFAAATKFVP 234
>gi|359495476|ref|XP_002274150.2| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
[Vitis vinifera]
gi|147801944|emb|CAN77327.1| hypothetical protein VITISV_001096 [Vitis vinifera]
Length = 269
Score = 150 bits (380), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 82/100 (82%), Positives = 84/100 (84%), Gaps = 3/100 (3%)
Query: 1 MGAVEGYRIAGGP-LGEVTDPLYPGG-SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEGYRI G P +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 171 MGLVEGYRINGLPGVGEGND-LYPGGPYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 229
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
GFFVQAIVTGKGPLENL DHL +PV NNAWAYAT FVPG
Sbjct: 230 GFFVQAIVTGKGPLENLLDHLDNPVANNAWAYATKFVPGS 269
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 66
+D GL+ DPEAFA + E+ +GR AM FG ++
Sbjct: 81 WDTAGLSADPEAFARNRALEVIHGRWAMLGAFGCITPEVL 120
>gi|209868183|gb|ACI90631.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus bungeana]
Length = 254
Score = 150 bits (379), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/76 (96%), Positives = 76/76 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 179 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGF 238
Query: 61 FVQAIVTGKGPLENLA 76
FVQAIVTGKGP+ENLA
Sbjct: 239 FVQAIVTGKGPIENLA 254
>gi|209868193|gb|ACI90636.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus massoniana]
Length = 233
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/76 (96%), Positives = 76/76 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 158 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGF 217
Query: 61 FVQAIVTGKGPLENLA 76
FVQAIVTGKGP+ENLA
Sbjct: 218 FVQAIVTGKGPIENLA 233
>gi|384250359|gb|EIE23838.1| hypothetical protein COCSUDRAFT_28488 [Coccomyxa subellipsoidea
C-169]
Length = 275
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/96 (76%), Positives = 80/96 (83%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYR+ GGP GE D +YPG SFDPLGLADDP+ FAELKVKEIKNGRLAMFS FGF
Sbjct: 180 MGAIEGYRVNGGPAGEGLDKVYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSNFGF 239
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FVQAIVTGKGP+ NL DHLA+P NN +A AT F P
Sbjct: 240 FVQAIVTGKGPIANLNDHLANPTVNNGFAAATKFTP 275
>gi|302800774|ref|XP_002982144.1| light-harvesting complex [Selaginella moellendorffii]
gi|300150160|gb|EFJ16812.1| light-harvesting complex [Selaginella moellendorffii]
Length = 263
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/100 (81%), Positives = 83/100 (83%), Gaps = 3/100 (3%)
Query: 1 MGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEGYRI G P +GE D LYPGG FDPLG ADDPE AELKVKEIKNGRLAMFSMF
Sbjct: 165 MGLVEGYRINGLPDVGEGGD-LYPGGQYFDPLGFADDPETLAELKVKEIKNGRLAMFSMF 223
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
GFFVQAIVTGKGPLENL DHL +PV NNAWAYAT FVPG
Sbjct: 224 GFFVQAIVTGKGPLENLFDHLDNPVVNNAWAYATRFVPGS 263
>gi|302765457|ref|XP_002966149.1| light-harvesting complex [Selaginella moellendorffii]
gi|300165569|gb|EFJ32176.1| light-harvesting complex [Selaginella moellendorffii]
Length = 263
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/100 (81%), Positives = 83/100 (83%), Gaps = 3/100 (3%)
Query: 1 MGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEGYRI G P +GE D LYPGG FDPLG ADDPE AELKVKEIKNGRLAMFSMF
Sbjct: 165 MGLVEGYRINGLPDVGEGGD-LYPGGQYFDPLGFADDPETLAELKVKEIKNGRLAMFSMF 223
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
GFFVQAIVTGKGPLENL DHL +PV NNAWAYAT FVPG
Sbjct: 224 GFFVQAIVTGKGPLENLFDHLDNPVVNNAWAYATRFVPGS 263
>gi|115794|sp|P27489.1|CB23_SOLLC RecName: Full=Chlorophyll a-b binding protein 13, chloroplastic;
AltName: Full=LHCII type III CAB-13; Flags: Precursor
gi|19277|emb|CAA42818.1| LHCII type III [Solanum lycopersicum]
Length = 265
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/99 (80%), Positives = 83/99 (83%), Gaps = 3/99 (3%)
Query: 1 MGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEG+RI G P +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 167 MGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMF 225
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
GFFVQAIVTGKGPLENL DHL +PV NNAW YAT FVPG
Sbjct: 226 GFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPG 264
>gi|224117282|ref|XP_002317529.1| light-harvesting complex II protein Lhcb3 [Populus trichocarpa]
gi|222860594|gb|EEE98141.1| light-harvesting complex II protein Lhcb3 [Populus trichocarpa]
Length = 263
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/100 (80%), Positives = 83/100 (83%), Gaps = 3/100 (3%)
Query: 1 MGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEG+RI G P +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 165 MGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMF 223
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
GFFVQAIVTGKGPLENL DHL +PV NNAW YAT FVPG
Sbjct: 224 GFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS 263
>gi|224122902|ref|XP_002330392.1| light-harvesting complex II protein Lhcb3 [Populus trichocarpa]
gi|222871777|gb|EEF08908.1| light-harvesting complex II protein Lhcb3 [Populus trichocarpa]
Length = 263
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/100 (80%), Positives = 83/100 (83%), Gaps = 3/100 (3%)
Query: 1 MGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEG+RI G P +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 165 MGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPATFAELKVKEIKNGRLAMFSMF 223
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
GFFVQAIVTGKGPLENL DHL +PV NNAW YAT FVPG
Sbjct: 224 GFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS 263
>gi|20671|emb|CAA49149.1| chlorophyll a/b-binding protein [Pisum sativum]
gi|141448064|gb|ABO87611.1| chloroplast chlorophyll-a/b binding protein [Pisum sativum]
Length = 265
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/99 (80%), Positives = 83/99 (83%), Gaps = 3/99 (3%)
Query: 1 MGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEG+RI G P +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 167 MGLVEGFRINGLPDVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 225
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
GFFVQAIVTGKGPLENL DHL +PV NNAW YAT FVPG
Sbjct: 226 GFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPG 264
>gi|160713965|gb|ABX47018.1| chloroplast chlorophyll a/b binding protein cab-BO3 [Bambusa
oldhamii]
Length = 267
Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/100 (80%), Positives = 82/100 (82%), Gaps = 3/100 (3%)
Query: 1 MGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEGYRI G P +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 169 MGLVEGYRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 227
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
GFFVQAIVTGKGPLENL DHL +PV NNAW YAT F PG
Sbjct: 228 GFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 267
>gi|56809383|gb|AAW31513.1| light-harvesting chlorophyll-a/b binding protein Lhcb3 [Pisum
sativum]
Length = 265
Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/99 (80%), Positives = 83/99 (83%), Gaps = 3/99 (3%)
Query: 1 MGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEG+RI G P +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 167 MGLVEGFRINGLPDVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 225
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
GFFVQAIVTGKGPLENL DHL +PV NNAW YAT FVPG
Sbjct: 226 GFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPG 264
>gi|118489712|gb|ABK96657.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 224
Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/100 (80%), Positives = 83/100 (83%), Gaps = 3/100 (3%)
Query: 1 MGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEG+RI G P +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 126 MGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMF 184
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
GFFVQAIVTGKGPLENL DHL +PV NNAW YAT FVPG
Sbjct: 185 GFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS 224
>gi|145079271|tpg|DAA05907.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm4 [Acetabularia acetabulum]
Length = 219
Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/91 (76%), Positives = 78/91 (85%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +E YR+ GGPLGE D L+PG SFDPLGLADDP+ FAELK+KEIKNGRLAMFSMFGF
Sbjct: 129 MGLIEAYRVNGGPLGEGLDTLHPGESFDPLGLADDPDTFAELKIKEIKNGRLAMFSMFGF 188
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYA 91
+VQAIVTGKGP+EN ADH+ADP N AW YA
Sbjct: 189 YVQAIVTGKGPIENWADHVADPFNVTAWNYA 219
>gi|160713967|gb|ABX47019.1| chloroplast chlorophyll a/b binding protein cab-BO3-1 [Bambusa
oldhamii]
Length = 267
Score = 148 bits (373), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/100 (79%), Positives = 82/100 (82%), Gaps = 3/100 (3%)
Query: 1 MGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEGYRI G P +GE D LYPGG FDPLGLADDP FAEL+VKEIKNGRLAMFSMF
Sbjct: 169 MGLVEGYRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELRVKEIKNGRLAMFSMF 227
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
GFFVQAIVTGKGPLENL DHL +PV NNAW YAT F PG
Sbjct: 228 GFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 267
>gi|156890564|gb|ABU96692.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 267
Score = 148 bits (373), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/100 (79%), Positives = 82/100 (82%), Gaps = 3/100 (3%)
Query: 1 MGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEGYRI G P +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 169 MGLVEGYRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 227
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
GFFVQAIVTGKGPLENL DH+ +PV NNAW YAT F PG
Sbjct: 228 GFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS 267
>gi|914284|gb|AAB34068.1| light-harvesting complex b type 3, Lhcb3 [Ginkgo biloba, 3-4 week
old seedlings, Peptide Partial, 132 aa]
Length = 132
Score = 148 bits (373), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/99 (79%), Positives = 84/99 (84%), Gaps = 3/99 (3%)
Query: 1 MGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEG+RI G P +GE D LYPGG FDPLGLADDP+ FAELKVKE+KNGRLAMFSMF
Sbjct: 34 MGLVEGFRINGLPGVGEGGD-LYPGGQYFDPLGLADDPDTFAELKVKEVKNGRLAMFSMF 92
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
GFFVQAIVTGKGPLENL DHL +PV NNAW YAT FVPG
Sbjct: 93 GFFVQAIVTGKGPLENLLDHLDNPVANNAWEYATKFVPG 131
>gi|356502352|ref|XP_003519983.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
[Glycine max]
Length = 104
Score = 147 bits (371), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 72/84 (85%), Positives = 75/84 (89%)
Query: 9 IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 68
IAGGPLGEV DP+Y GS DPLGLADDPE FAELKVKE KN RLAMFSMFGFFVQAIVTG
Sbjct: 9 IAGGPLGEVIDPIYLEGSIDPLGLADDPEVFAELKVKEFKNRRLAMFSMFGFFVQAIVTG 68
Query: 69 KGPLENLADHLADPVNNNAWAYAT 92
KG LENL +HLA+PVNNNAWAYAT
Sbjct: 69 KGSLENLTNHLANPVNNNAWAYAT 92
>gi|159478875|ref|XP_001697526.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
gi|19749357|gb|AAD03732.2| light harvesting complex II protein precursor [Chlamydomonas
reinhardtii]
gi|158274405|gb|EDP00188.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
Length = 268
Score = 147 bits (370), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 73/97 (75%), Positives = 81/97 (83%), Gaps = 1/97 (1%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MGA+EGYR+ GGP GE D L+PGG F DPLGLA+DP+AFAELKVKEIKNGRLAMFSMFG
Sbjct: 171 MGAIEGYRVNGGPAGEGLDKLHPGGQFFDPLGLAEDPDAFAELKVKEIKNGRLAMFSMFG 230
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FFVQAIVTGKGPL NL +HLA P +NA+ YA F P
Sbjct: 231 FFVQAIVTGKGPLANLDEHLASPFTSNAFTYAQKFTP 267
>gi|48375048|gb|AAT42191.1| chloroplast chlorophyll a-b binding protein [Nicotiana tabacum]
Length = 199
Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/98 (78%), Positives = 80/98 (81%), Gaps = 1/98 (1%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MG VEG+RI G P + LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFG
Sbjct: 101 MGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFG 160
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FFVQAIVTGKGPLENL DHL +PV NNAW YAT FVPG
Sbjct: 161 FFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPG 198
>gi|87313205|gb|ABD37899.1| light-harvesting chlorophyll-a/b binding protein LhcbM2
[Acutodesmus obliquus]
Length = 249
Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/100 (74%), Positives = 79/100 (79%), Gaps = 3/100 (3%)
Query: 1 MGAVEGYRIAGGP---LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 57
MGA E YR GG GE D LYPGG+FDPLGLADDP+ AELKVKEIKNGRLAMFSM
Sbjct: 149 MGAAESYRANGGAPGGFGEDLDSLYPGGAFDPLGLADDPDTLAELKVKEIKNGRLAMFSM 208
Query: 58 FGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FGFFVQAIVTG+GP+ NL HL+DP NNAW YAT FVPG
Sbjct: 209 FGFFVQAIVTGQGPIANLDAHLSDPSGNNAWNYATKFVPG 248
>gi|147860827|emb|CAN83151.1| hypothetical protein VITISV_031291 [Vitis vinifera]
Length = 244
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/99 (77%), Positives = 80/99 (80%), Gaps = 1/99 (1%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MG VEG+RI G P + LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFG
Sbjct: 146 MGLVEGFRINGLPGVGDGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFG 205
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FFVQAIVTGKGPLENL DHL +PV NNAW YAT FVPG
Sbjct: 206 FFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS 244
>gi|312281753|dbj|BAJ33742.1| unnamed protein product [Thellungiella halophila]
Length = 265
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/99 (79%), Positives = 83/99 (83%), Gaps = 3/99 (3%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEG+RI G +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 167 MGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 225
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
GFFVQAIVTGKGPLENL DH+ DPV NNAWA+AT FVPG
Sbjct: 226 GFFVQAIVTGKGPLENLLDHIDDPVANNAWAFATKFVPG 264
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Query: 16 EVTDPLYPGGSF------DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 66
V P Y G F D GL+ DPEAFA+ + E+ +GR AM FG ++
Sbjct: 60 SVQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVL 116
>gi|255569585|ref|XP_002525758.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223534908|gb|EEF36594.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 268
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/100 (79%), Positives = 82/100 (82%), Gaps = 3/100 (3%)
Query: 1 MGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEG+RI G P +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 170 MGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 228
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
GFFVQAIVTGKGPLENL DHL +PV NNAW YAT F PG
Sbjct: 229 GFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFSPGS 268
>gi|388520661|gb|AFK48392.1| unknown [Lotus japonicus]
Length = 270
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/100 (79%), Positives = 82/100 (82%), Gaps = 3/100 (3%)
Query: 1 MGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEG+RI G P +GE + LYPG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 172 MGLVEGFRINGLPGVGEGNN-LYPGDQYFDPLGLADDPATFAELKVKEIKNGRLAMFSMF 230
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
GFFVQAIVTGKGPLENL DHL DPV NNAW YAT FVPG
Sbjct: 231 GFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFVPGS 270
>gi|225461315|ref|XP_002284493.1| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
[Vitis vinifera]
Length = 266
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/99 (77%), Positives = 80/99 (80%), Gaps = 1/99 (1%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MG VEG+RI G P + LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFG
Sbjct: 168 MGLVEGFRINGLPGVGDGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFG 227
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FFVQAIVTGKGPLENL DHL +PV NNAW YAT FVPG
Sbjct: 228 FFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS 266
>gi|384246503|gb|EIE19993.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
Length = 254
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/98 (72%), Positives = 80/98 (81%), Gaps = 1/98 (1%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+G EGYR+ GGP GE+TDPLYPGG+FDPLGLADDP+ FAELKVKEIKNGRLA F+ GF
Sbjct: 156 LGLAEGYRVNGGPAGEITDPLYPGGAFDPLGLADDPDTFAELKVKEIKNGRLAQFAALGF 215
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAY-ATNFVPG 97
FVQAIVTGKGP++NL DHLADP N + A FVPG
Sbjct: 216 FVQAIVTGKGPIQNLEDHLADPFAVNGFTIGAQKFVPG 253
>gi|374434016|gb|AEZ52400.1| LHCII type III chlorophyll a/b binding protein [Wolffia
australiana]
Length = 264
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/100 (78%), Positives = 81/100 (81%), Gaps = 3/100 (3%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEG+RI G +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 166 MGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 224
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
GFF+QAIVTGKGPLENL DHL DPV NNAW YAT F PG
Sbjct: 225 GFFIQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS 264
>gi|169124051|gb|ACA47401.1| chloroplast chlorophyll-a/b binding protein [Medicago falcata]
Length = 266
Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/100 (78%), Positives = 83/100 (83%), Gaps = 3/100 (3%)
Query: 1 MGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEG+RI G P +GE + LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 168 MGLVEGFRINGLPGVGEGNN-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 226
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
GFFVQAIVTGKGPLENL DH+ +PV NNAW YAT FVPG
Sbjct: 227 GFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFVPGS 266
>gi|357452427|ref|XP_003596490.1| Chlorophyll a/b-binding protein [Medicago truncatula]
gi|355485538|gb|AES66741.1| Chlorophyll a/b-binding protein [Medicago truncatula]
Length = 264
Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/100 (78%), Positives = 83/100 (83%), Gaps = 3/100 (3%)
Query: 1 MGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEG+RI G P +GE + LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 166 MGLVEGFRINGLPGVGEGNN-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 224
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
GFFVQAIVTGKGPLENL DH+ +PV NNAW YAT FVPG
Sbjct: 225 GFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFVPGS 264
>gi|359806176|ref|NP_001241200.1| uncharacterized protein LOC100790960 [Glycine max]
gi|255635333|gb|ACU18020.1| unknown [Glycine max]
Length = 267
Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/100 (79%), Positives = 81/100 (81%), Gaps = 3/100 (3%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEGYRI G +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 169 MGLVEGYRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 227
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
GFFVQAIVTGKGPLENL DHL +PV NNAW YAT F PG
Sbjct: 228 GFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 267
>gi|302143082|emb|CBI20377.3| unnamed protein product [Vitis vinifera]
Length = 231
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/99 (77%), Positives = 80/99 (80%), Gaps = 1/99 (1%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MG VEG+RI G P + LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMFG
Sbjct: 133 MGLVEGFRINGLPGVGDGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFG 192
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FFVQAIVTGKGPLENL DHL +PV NNAW YAT FVPG
Sbjct: 193 FFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS 231
>gi|307106007|gb|EFN54254.1| hypothetical protein CHLNCDRAFT_59709 [Chlorella variabilis]
Length = 243
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 67/88 (76%), Positives = 75/88 (85%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGP GE+TDP+YPG +FDPLGLADDP+ AELKVKEIKNGRLAM SMFGF
Sbjct: 148 MGLIEGYRVNGGPAGEITDPIYPGEAFDPLGLADDPDTLAELKVKEIKNGRLAMVSMFGF 207
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAW 88
F+QAIVTGKGP+ENL DHLA P N W
Sbjct: 208 FIQAIVTGKGPIENLNDHLAAPGETNFW 235
>gi|359807444|ref|NP_001240880.1| uncharacterized protein LOC100779387 [Glycine max]
gi|255646132|gb|ACU23552.1| unknown [Glycine max]
Length = 268
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/100 (79%), Positives = 81/100 (81%), Gaps = 3/100 (3%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEGYRI G +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 170 MGLVEGYRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 228
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
GFFVQAIVTGKGPLENL DHL +PV NNAW YAT F PG
Sbjct: 229 GFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFSPGS 268
>gi|449463148|ref|XP_004149296.1| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
[Cucumis sativus]
gi|449532805|ref|XP_004173369.1| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
[Cucumis sativus]
Length = 264
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/100 (79%), Positives = 81/100 (81%), Gaps = 3/100 (3%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEG+RI G +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 166 MGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 224
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
GFFVQAIVTGKGPLENL DHL DPV NNAW YAT F PG
Sbjct: 225 GFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS 264
>gi|302854015|ref|XP_002958519.1| hypothetical protein VOLCADRAFT_110088 [Volvox carteri f.
nagariensis]
gi|300256166|gb|EFJ40439.1| hypothetical protein VOLCADRAFT_110088 [Volvox carteri f.
nagariensis]
Length = 270
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/97 (74%), Positives = 83/97 (85%), Gaps = 1/97 (1%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MGA+EG+R+ GGP GE D L+PGG FDPL LA+DP+AFAELKVKEIKNGRLAMFSMFG
Sbjct: 172 MGAIEGFRVNGGPAGEGLDKLHPGGPWFDPLALAEDPDAFAELKVKEIKNGRLAMFSMFG 231
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FFVQAIVTG+GP+ENL HLA+P NNA+A+AT F P
Sbjct: 232 FFVQAIVTGQGPIENLESHLANPGVNNAFAFATKFTP 268
>gi|302854495|ref|XP_002958755.1| hypothetical protein VOLCADRAFT_69853 [Volvox carteri f.
nagariensis]
gi|300255930|gb|EFJ40211.1| hypothetical protein VOLCADRAFT_69853 [Volvox carteri f.
nagariensis]
Length = 88
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/86 (82%), Positives = 76/86 (88%)
Query: 11 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 70
GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 1 GGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 60
Query: 71 PLENLADHLADPVNNNAWAYATNFVP 96
P+ENL DHLA+P NNA+A+AT F P
Sbjct: 61 PIENLNDHLANPAVNNAFAFATKFTP 86
>gi|307103588|gb|EFN51847.1| hypothetical protein CHLNCDRAFT_59790 [Chlorella variabilis]
Length = 251
Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/97 (74%), Positives = 79/97 (81%), Gaps = 1/97 (1%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MGA E YR AG GP+ D LYPGG+FDPLGLADDP+ AELKVKE+KNGRLAMFSMFG
Sbjct: 153 MGAAEAYRYAGEGPVETSGDSLYPGGAFDPLGLADDPDTLAELKVKELKNGRLAMFSMFG 212
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FFVQA++TGK PLENLADHLADP N +A AT FVP
Sbjct: 213 FFVQALITGKSPLENLADHLADPSTANGFAVATKFVP 249
>gi|6644196|gb|AAF20948.1|AF207690_1 chlorophyll a/b-binding protein [Daucus carota]
Length = 264
Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 78/100 (78%), Positives = 81/100 (81%), Gaps = 3/100 (3%)
Query: 1 MGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VE +RI G P +GE D LYPGG FDPLGLADDP AELKVKEIKNGRLAMFSMF
Sbjct: 166 MGLVESFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTLAELKVKEIKNGRLAMFSMF 224
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
GFFVQAIVTGKGPLENL DHL +PV NNAW YAT FVPG
Sbjct: 225 GFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS 264
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
Query: 12 GPLGEVTDPLYPGGSF------DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 65
GP T P Y G F D GL+ DPEAFA+ + E+ +GR AM FG +
Sbjct: 56 GPFSAQT-PSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEV 114
Query: 66 V 66
+
Sbjct: 115 L 115
>gi|242045970|ref|XP_002460856.1| hypothetical protein SORBIDRAFT_02g036380 [Sorghum bicolor]
gi|241924233|gb|EER97377.1| hypothetical protein SORBIDRAFT_02g036380 [Sorghum bicolor]
Length = 268
Score = 144 bits (363), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 78/100 (78%), Positives = 81/100 (81%), Gaps = 3/100 (3%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEG+RI G +GE + LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 170 MGLVEGFRINGLDGVGEGNN-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 228
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
GFFVQAIVTGKGPLENL DHL DPV NNAW YAT F PG
Sbjct: 229 GFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS 268
>gi|226509520|ref|NP_001150523.1| chlorophyll a-b binding protein of LHCII type III [Zea mays]
gi|195613464|gb|ACG28562.1| chlorophyll a-b binding protein of LHCII type III [Zea mays]
gi|195639878|gb|ACG39407.1| chlorophyll a-b binding protein of LHCII type III [Zea mays]
Length = 272
Score = 144 bits (363), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 78/100 (78%), Positives = 81/100 (81%), Gaps = 3/100 (3%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEG+RI G +GE + LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 174 MGLVEGFRINGLDGVGEGNN-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 232
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
GFFVQAIVTGKGPLENL DHL DPV NNAW YAT F PG
Sbjct: 233 GFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS 272
>gi|414887113|tpg|DAA63127.1| TPA: chlorophyll a-b binding protein of LHCII type III isoform 1
[Zea mays]
gi|414887114|tpg|DAA63128.1| TPA: chlorophyll a-b binding protein of LHCII type III isoform 2
[Zea mays]
Length = 269
Score = 144 bits (363), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 78/100 (78%), Positives = 81/100 (81%), Gaps = 3/100 (3%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEG+RI G +GE + LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 171 MGLVEGFRINGLDGVGEGNN-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 229
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
GFFVQAIVTGKGPLENL DHL DPV NNAW YAT F PG
Sbjct: 230 GFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS 269
>gi|15239602|ref|NP_200238.1| light-harvesting chlorophyll B-binding protein 3 [Arabidopsis
thaliana]
gi|4741952|gb|AAD28773.1|AF134126_1 Lhcb3 protein [Arabidopsis thaliana]
gi|5002210|gb|AAD37362.1|AF143691_1 type III chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|13605754|gb|AAK32870.1|AF361858_1 AT5g54270/MDK4_9 [Arabidopsis thaliana]
gi|13926339|gb|AAK49633.1|AF372917_1 AT5g54270/MDK4_9 [Arabidopsis thaliana]
gi|9759500|dbj|BAB10750.1| Lhcb3 chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|16323262|gb|AAL15365.1| AT5g54270/MDK4_9 [Arabidopsis thaliana]
gi|332009094|gb|AED96477.1| light-harvesting chlorophyll B-binding protein 3 [Arabidopsis
thaliana]
Length = 265
Score = 144 bits (363), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 78/99 (78%), Positives = 82/99 (82%), Gaps = 3/99 (3%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEG+RI G +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 167 MGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 225
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
GFFVQAIVTGKGPLENL DHL +PV NNAWA+AT F PG
Sbjct: 226 GFFVQAIVTGKGPLENLLDHLDNPVANNAWAFATKFAPG 264
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Query: 16 EVTDPLYPGGSF------DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 66
V P Y G F D GL+ DPEAFA+ + E+ +GR AM FG ++
Sbjct: 60 SVQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVL 116
>gi|297792877|ref|XP_002864323.1| light-harvesting chlorophyll binding protein 3 [Arabidopsis lyrata
subsp. lyrata]
gi|297310158|gb|EFH40582.1| light-harvesting chlorophyll binding protein 3 [Arabidopsis lyrata
subsp. lyrata]
Length = 265
Score = 144 bits (363), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 78/99 (78%), Positives = 82/99 (82%), Gaps = 3/99 (3%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEG+RI G +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 167 MGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 225
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
GFFVQAIVTGKGPLENL DHL +PV NNAWA+AT F PG
Sbjct: 226 GFFVQAIVTGKGPLENLLDHLDNPVANNAWAFATKFAPG 264
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Query: 16 EVTDPLYPGGSF------DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 66
V P Y G F D GL+ DPEAFA+ + E+ +GR AM FG ++
Sbjct: 60 SVQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVL 116
>gi|371721828|gb|AEX55237.1| chloroplast chlorophyll a/b binding protein cab-BO3 [Allium
sativum]
Length = 261
Score = 144 bits (362), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 78/100 (78%), Positives = 81/100 (81%), Gaps = 3/100 (3%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MGAVEG+RI G +G D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 163 MGAVEGFRINGLDGVGNGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 221
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
GFFVQAIVTGKGPLEN DHL +PV NNAW YAT FVPG
Sbjct: 222 GFFVQAIVTGKGPLENWLDHLDNPVANNAWVYATKFVPGS 261
>gi|115793|sp|P27523.1|CB23_HORVU RecName: Full=Chlorophyll a-b binding protein of LHCII type III,
chloroplastic; Short=CAB; Flags: Precursor
gi|19023|emb|CAA44881.1| type III LHCII CAB precursor protein [Hordeum vulgare]
Length = 268
Score = 144 bits (362), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 78/100 (78%), Positives = 81/100 (81%), Gaps = 3/100 (3%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEG+RI G +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 170 MGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 228
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
GFFVQAIVTGKGPLENL DHL DPV NNAW +AT F PG
Sbjct: 229 GFFVQAIVTGKGPLENLFDHLDDPVANNAWVFATKFAPGS 268
>gi|209778961|gb|ACI87791.1| putative chloroplast chlorophyll a/b-binding protein [Cupressus
sempervirens]
Length = 124
Score = 144 bits (362), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 69/79 (87%), Positives = 73/79 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 46 MGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 105
Query: 61 FVQAIVTGKGPLENLADHL 79
FVQAIVTGKGP+ENL DH
Sbjct: 106 FVQAIVTGKGPIENLYDHF 124
>gi|357122389|ref|XP_003562898.1| PREDICTED: chlorophyll a-b binding protein of LHCII type III,
chloroplastic-like [Brachypodium distachyon]
Length = 267
Score = 144 bits (362), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 78/100 (78%), Positives = 81/100 (81%), Gaps = 3/100 (3%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEG+RI G +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 169 MGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 227
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
GFFVQAIVTGKGPLENL DHL DPV NNAW +AT F PG
Sbjct: 228 GFFVQAIVTGKGPLENLFDHLDDPVANNAWVFATKFAPGS 267
>gi|227202590|dbj|BAH56768.1| AT5G54270 [Arabidopsis thaliana]
Length = 162
Score = 144 bits (362), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 78/99 (78%), Positives = 82/99 (82%), Gaps = 3/99 (3%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEG+RI G +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 64 MGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 122
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
GFFVQAIVTGKGPLENL DHL +PV NNAWA+AT F PG
Sbjct: 123 GFFVQAIVTGKGPLENLLDHLDNPVANNAWAFATKFAPG 161
>gi|307105157|gb|EFN53408.1| hypothetical protein CHLNCDRAFT_137219 [Chlorella variabilis]
Length = 258
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/98 (74%), Positives = 78/98 (79%), Gaps = 1/98 (1%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
+G E YR AG GP+ D LYPGG FDPLGL DDPEA AELKVKEIKNGRLA S+FG
Sbjct: 158 VGTAEAYRYAGEGPVDTSGDKLYPGGFFDPLGLGDDPEALAELKVKEIKNGRLAQVSVFG 217
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FFVQA+VTGKGPLENL DHLADP NNN +AYA FVPG
Sbjct: 218 FFVQALVTGKGPLENLDDHLADPWNNNGFAYAAKFVPG 255
>gi|384253398|gb|EIE26873.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
Length = 250
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/97 (76%), Positives = 79/97 (81%), Gaps = 1/97 (1%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MG E YR AG GP E D LYPGG FDPLGLADDP+ F+ELKVKEIKNGRLAMFSMFG
Sbjct: 154 MGGAEAYRAAGEGPGLEGLDSLYPGGPFDPLGLADDPDTFSELKVKEIKNGRLAMFSMFG 213
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FFVQAIVTGKGP+ENL+DHLADP NN +A AT F P
Sbjct: 214 FFVQAIVTGKGPIENLSDHLADPGVNNGFAAATKFAP 250
>gi|405617|emb|CAA43804.1| LHCII Type III chlorophyll a/b binding protein [Brassica napus]
Length = 221
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/99 (79%), Positives = 82/99 (82%), Gaps = 3/99 (3%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEG RI G +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 123 MGLVEGLRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 181
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
GFFVQAIVTGKGPLENL DHL +PV NNAWA+AT FVPG
Sbjct: 182 GFFVQAIVTGKGPLENLLDHLDNPVANNAWAFATKFVPG 220
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 16 EVTDPLYPGGSF------DPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
V P Y G F D GL+ DPEAFA+ + E+ +GR AM FG
Sbjct: 16 SVQTPSYLTGEFPGEYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFG 65
>gi|452341|emb|CAA48641.1| type II light-harvesting chlorophyll a /b-binding protein [Zea
mays]
Length = 229
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/97 (81%), Positives = 87/97 (89%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGY + GGPLGE D +YPGG+F+PLGLADDP+ AELKVKE+KNGRLAMFSMFGF
Sbjct: 132 MGFVEGYGVGGGPLGEGLDKVYPGGAFEPLGLADDPDTAAELKVKELKNGRLAMFSMFGF 191
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPG
Sbjct: 192 FVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPG 228
>gi|156890566|gb|ABU96693.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 267
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/100 (77%), Positives = 80/100 (80%), Gaps = 3/100 (3%)
Query: 1 MGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEGYRI G P +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 169 MGLVEGYRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 227
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FFVQAIVTGKG LENL DH+ +PV NNAW YAT F PG
Sbjct: 228 RFFVQAIVTGKGSLENLLDHIDNPVANNAWVYATKFAPGS 267
>gi|4689380|gb|AAD27877.1|AF139465_1 LHCII type III chlorophyll a/b binding protein [Vigna radiata]
Length = 269
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/100 (77%), Positives = 81/100 (81%), Gaps = 3/100 (3%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEG+RI G +GE + LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 171 MGLVEGFRINGLDGVGEGNN-LYPGGQYFDPLGLADDPATFAELKVKEIKNGRLAMFSMF 229
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
GFFVQAIVTGKGPLENL DHL +PV NNAW YAT F PG
Sbjct: 230 GFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 269
>gi|302844283|ref|XP_002953682.1| hypothetical protein VOLCADRAFT_106034 [Volvox carteri f.
nagariensis]
gi|300261091|gb|EFJ45306.1| hypothetical protein VOLCADRAFT_106034 [Volvox carteri f.
nagariensis]
Length = 143
Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/95 (72%), Positives = 76/95 (80%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ G P GE DPLY G SFDPLGLADDP+ F EL VKE KNGRLAMFSMFGF
Sbjct: 46 MGLVEGYRVNGSPAGEGLDPLYHGESFDPLGLADDPDTFTELMVKETKNGRLAMFSMFGF 105
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFV 95
F+QAIVTG P+ENL DHLA+P NNA+A+AT V
Sbjct: 106 FMQAIVTGNDPIENLNDHLANPGVNNAFAFATKLV 140
>gi|157965837|gb|ABW06955.1| chloroplast light-harvesting complex II protein precursor [Euglena
gracilis]
Length = 613
Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/98 (70%), Positives = 79/98 (80%), Gaps = 2/98 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG E YR+ GGPLGE +D LYPGG+FDPLGLADDPE FAELKVKE+KNGRLAMF+MFGF
Sbjct: 19 MGLAEAYRVNGGPLGEDSDALYPGGAFDPLGLADDPETFAELKVKELKNGRLAMFAMFGF 78
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWA--YATNFVP 96
+VQA+VTG+GP+EN A H+ADP N N Y T F P
Sbjct: 79 YVQALVTGEGPVENWAAHVADPFNVNGLTAVYVTQFAP 116
Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/98 (70%), Positives = 79/98 (80%), Gaps = 2/98 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG E YR+ GGPLGE +D LYPGG+FDPLGLADDPE FAELKVKE+KNGRLAMF+MFGF
Sbjct: 259 MGLAEAYRVNGGPLGEDSDALYPGGAFDPLGLADDPETFAELKVKELKNGRLAMFAMFGF 318
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWA--YATNFVP 96
+VQA+VTG+GP+EN A H+ADP N N Y T F P
Sbjct: 319 YVQALVTGEGPVENWAAHVADPFNVNGLTAVYVTQFAP 356
Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/98 (70%), Positives = 79/98 (80%), Gaps = 2/98 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG E YR+ GGPLGE +D LYPGG+FDPLGLADDPE FAELKVKE+KNGRLAMF+MFGF
Sbjct: 499 MGLAEAYRVNGGPLGEDSDALYPGGAFDPLGLADDPETFAELKVKELKNGRLAMFAMFGF 558
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWA--YATNFVP 96
+VQA+VTG+GP+EN A H+ADP N N Y T F P
Sbjct: 559 YVQALVTGEGPVENWAAHVADPFNVNGLTAVYVTQFAP 596
>gi|18254|emb|CAA49209.1| a/b binding protein [Pyrobotrys stellata]
Length = 254
Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/94 (73%), Positives = 77/94 (81%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG EGYRI GGPLGE DPLYPGG+FDPLGLADDP+ AELKVKE+KNGR+AM +MFGF
Sbjct: 160 MGWAEGYRINGGPLGEGLDPLYPGGAFDPLGLADDPDTLAELKVKELKNGRMAMAAMFGF 219
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 94
VQAIVT KGPLENLADHLA P NN ++ A +
Sbjct: 220 LVQAIVTQKGPLENLADHLAAPGTNNVFSNAATY 253
>gi|145078830|tpg|DAA05886.1| TPA_inf: chloroplast light-harvesting complex II protein
precursor Lhcbm6 [Euglena gracilis]
Length = 825
Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/98 (70%), Positives = 79/98 (80%), Gaps = 2/98 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG E YR+ GGPLGE +D LYPGG+FDPLGLADDPE FAELKVKE+KNGRLAMF+MFGF
Sbjct: 2 MGLAEAYRVNGGPLGEDSDALYPGGAFDPLGLADDPETFAELKVKELKNGRLAMFAMFGF 61
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWA--YATNFVP 96
+VQA+VTG+GP+EN A H+ADP N N Y T F P
Sbjct: 62 YVQALVTGEGPVENWAAHVADPFNVNGLTAVYVTQFAP 99
Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/98 (70%), Positives = 79/98 (80%), Gaps = 2/98 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG E YR+ GGPLGE +D LYPGG+FDPLGLADDPE FAELKVKE+KNGRLAMF+MFGF
Sbjct: 242 MGLAEAYRVNGGPLGEDSDALYPGGAFDPLGLADDPETFAELKVKELKNGRLAMFAMFGF 301
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWA--YATNFVP 96
+VQA+VTG+GP+EN A H+ADP N N Y T F P
Sbjct: 302 YVQALVTGEGPVENWAAHVADPFNVNGLTAVYVTQFAP 339
Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/98 (70%), Positives = 79/98 (80%), Gaps = 2/98 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG E YR+ GGPLGE +D LYPGG+FDPLGLADDPE FAELKVKE+KNGRLAMF+MFGF
Sbjct: 482 MGLAEAYRVNGGPLGEDSDALYPGGAFDPLGLADDPETFAELKVKELKNGRLAMFAMFGF 541
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWA--YATNFVP 96
+VQA+VTG+GP+EN A H+ADP N N Y T F P
Sbjct: 542 YVQALVTGEGPVENWAAHVADPFNVNGLTAVYVTQFAP 579
Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/98 (70%), Positives = 79/98 (80%), Gaps = 2/98 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG E YR+ GGPLGE +D LYPGG+FDPLGLADDPE FAELKVKE+KNGRLAMF+MFGF
Sbjct: 722 MGLAEAYRVNGGPLGEDSDALYPGGAFDPLGLADDPETFAELKVKELKNGRLAMFAMFGF 781
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWA--YATNFVP 96
+VQA+VTG+GP+EN A H+ADP N N Y T F P
Sbjct: 782 YVQALVTGEGPVENWAAHVADPFNVNGLTAVYVTQFAP 819
>gi|195616522|gb|ACG30091.1| chlorophyll a-b binding protein 2 [Zea mays]
Length = 241
Score = 141 bits (355), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 74/98 (75%), Positives = 75/98 (76%), Gaps = 23/98 (23%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIA DDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 167 MGAVEGYRIA-----------------------DDPEAFAELKVKEIKNGRLAMFSMFGF 203
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 204 FVQAIVTGKGPVENLADHLADPVNNNAWAYATNFVPGK 241
>gi|90191871|gb|ABD91647.1| major light-harvesting chlorophyll a/b protein 2.2 [Dunaliella
salina]
gi|90191875|gb|ABD91649.1| major light-harvesting chlorophyll a/b protein 2.2 [Dunaliella
salina]
Length = 253
Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 72/99 (72%), Positives = 77/99 (77%), Gaps = 2/99 (2%)
Query: 1 MGAVEGYRIAGGPLG--EVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG E YR GG G + D LYPGG FDPLGLADDP+ FAELKVKEIKNGRLAMFS
Sbjct: 154 MGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAMFSCL 213
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
GFFVQAIVTGKGP++NL DHLADP NNA+A AT F PG
Sbjct: 214 GFFVQAIVTGKGPVQNLTDHLADPTVNNAFASATKFTPG 252
>gi|384252962|gb|EIE26437.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
Length = 245
Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/97 (75%), Positives = 77/97 (79%), Gaps = 1/97 (1%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MG E YR G GP E D LYPGG FDPLGLADDP+ FAELK KEIKNGRLAMFSMFG
Sbjct: 149 MGGAEAYRANGEGPGVEGLDSLYPGGPFDPLGLADDPDTFAELKTKEIKNGRLAMFSMFG 208
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FFVQAIVTGKGP+ENL+DHLADP NN +A AT F P
Sbjct: 209 FFVQAIVTGKGPIENLSDHLADPGVNNGFAAATKFAP 245
>gi|90191869|gb|ABD91646.1| major light-harvesting chlorophyll a/b protein 2.1 [Dunaliella
salina]
gi|90191873|gb|ABD91648.1| major light-harvesting chlorophyll a/b protein 2.1 [Dunaliella
salina]
Length = 253
Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 72/99 (72%), Positives = 77/99 (77%), Gaps = 2/99 (2%)
Query: 1 MGAVEGYRIAGGPLG--EVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG E YR GG G + D LYPGG FDPLGLADDP+ FAELKVKEIKNGRLAMFS
Sbjct: 154 MGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAMFSCL 213
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
GFFVQAIVTGKGP++NL DHLADP NNA+A AT F PG
Sbjct: 214 GFFVQAIVTGKGPVQNLTDHLADPTVNNAFASATKFTPG 252
>gi|359754897|gb|AEV59638.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis arctobia]
Length = 212
Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 69/71 (97%), Positives = 70/71 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 142 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 201
Query: 61 FVQAIVTGKGP 71
FVQAIVTGKGP
Sbjct: 202 FVQAIVTGKGP 212
>gi|123316054|gb|ABM74386.1| major light-harvesting chlorophyll a/b protein 3 [Dunaliella
salina]
gi|123316062|gb|ABM74387.1| major light-harvesting chlorophyll a/b protein 3 [Dunaliella
salina]
Length = 261
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/97 (75%), Positives = 79/97 (81%), Gaps = 1/97 (1%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MGA EG+R G P E D LYPGG FDPLGLADDP+ FAELKVKEIKNGRLAMF+ FG
Sbjct: 163 MGAAEGFRANGEAPGVEGLDTLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAMFACFG 222
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FFVQAIVTGKGP++NL DHLADP NNA+A AT FVP
Sbjct: 223 FFVQAIVTGKGPIQNLEDHLADPGVNNAFASATKFVP 259
>gi|87313207|gb|ABD37900.1| light-harvesting chlorophyll-a/b binding protein LhcbM3
[Acutodesmus obliquus]
Length = 248
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/101 (72%), Positives = 78/101 (77%), Gaps = 4/101 (3%)
Query: 1 MGAVEGYRIAGGP---LGEVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFS 56
MGA E YR GG GE D LYPGG F DPLGLADDP+ AELKVKE+KNGRLAMFS
Sbjct: 147 MGAAEAYRANGGAPGGFGEDLDSLYPGGKFFDPLGLADDPDTLAELKVKELKNGRLAMFS 206
Query: 57 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
MFGFFVQAIVTG+GP+ NL HLADP NNAW +AT FVPG
Sbjct: 207 MFGFFVQAIVTGQGPIANLDAHLADPSGNNAWNFATKFVPG 247
>gi|115829|sp|P27517.1|CB2_DUNTE RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|167985|gb|AAA62772.1| 28.5 kDa LHCII apoprotein [Dunaliella tertiolecta]
Length = 253
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/99 (71%), Positives = 76/99 (76%), Gaps = 2/99 (2%)
Query: 1 MGAVEGYRIAGGPLG--EVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG E YR GG G + D LYPGG FDPLGLADDP+ FAELKVKEIKNGRLAMFS
Sbjct: 154 MGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAMFSCL 213
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
GFFVQAIVTGKGP++NL DHLADP N A+A AT F PG
Sbjct: 214 GFFVQAIVTGKGPVQNLTDHLADPTVNKAFASATKFTPG 252
>gi|326511319|dbj|BAJ87673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 138 bits (347), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/73 (91%), Positives = 68/73 (93%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGE+ DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLE 73
FVQAIVTG P
Sbjct: 229 FVQAIVTGGEPCR 241
>gi|32307464|gb|AAP79137.1| chlorophyll a/b-binding protein II 1 [Bigelowiella natans]
Length = 346
Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/98 (69%), Positives = 76/98 (77%), Gaps = 2/98 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG E YR+ GGP GE D + PGG+FDPLGLADDP+ FAELKVKEIKNGRLAMFSM GF
Sbjct: 249 MGGAEAYRVNGGPAGEGLDAINPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMLGF 308
Query: 61 FVQAIVTGKGPLENLADHLADP--VNNNAWAYATNFVP 96
+VQAI TGKGP+EN A+H+ADP VN A AT F P
Sbjct: 309 YVQAISTGKGPVENWAEHIADPSGVNGLTLATATKFTP 346
>gi|8925552|gb|AAF81517.1|AF268319_1 light-harvesting complex protein LHCG4 [Bigelowiella natans]
gi|145078979|tpg|DAA05891.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm2 [Bigelowiella natans]
Length = 345
Score = 137 bits (345), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/98 (69%), Positives = 76/98 (77%), Gaps = 2/98 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG E YR+ GGP GE D + PGG+FDPLGLADDP+ FAELKVKEIKNGRLAMFSM GF
Sbjct: 248 MGGAEAYRVNGGPAGEGLDAINPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMLGF 307
Query: 61 FVQAIVTGKGPLENLADHLADP--VNNNAWAYATNFVP 96
+VQAI TGKGP+EN A+H+ADP VN A AT F P
Sbjct: 308 YVQAISTGKGPVENWAEHIADPSGVNGLTLATATKFTP 345
>gi|212721622|ref|NP_001132387.1| light harvesting complex mesophyll7 [Zea mays]
gi|194694246|gb|ACF81207.1| unknown [Zea mays]
Length = 185
Score = 137 bits (345), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 67/74 (90%), Positives = 69/74 (93%)
Query: 25 GSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 84
G P LADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADH+ADPVN
Sbjct: 112 GCVFPELLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVN 171
Query: 85 NNAWAYATNFVPGK 98
NNAWAYATNFVPGK
Sbjct: 172 NNAWAYATNFVPGK 185
>gi|237510764|gb|ACQ99368.1| chloroplast light-harvesting chlorophyll-a/b binding protein
[Ankistrodesmus convolutus]
Length = 248
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/99 (71%), Positives = 77/99 (77%), Gaps = 3/99 (3%)
Query: 1 MGAVEGYRIAGGPLG---EVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 57
MGA E +R GG G E D LYPG FDP+GLA+DP+ FAELKVKEIKNGRLAMFSM
Sbjct: 149 MGAAESFRFNGGAPGGFLEGNDRLYPGDQFDPMGLAEDPDTFAELKVKEIKNGRLAMFSM 208
Query: 58 FGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FGFFVQAIVTG+GP+ NL HLADP NNAWA AT FVP
Sbjct: 209 FGFFVQAIVTGQGPIANLDAHLADPSVNNAWAAATKFVP 247
>gi|157987283|gb|ABW07803.1| chlorophyll A-B binding protein [Solenostemon scutellarioides]
Length = 170
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/76 (85%), Positives = 71/76 (93%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE D +YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 91 MGLIEGYRVGGGPLGEGLDKVYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 150
Query: 61 FVQAIVTGKGPLENLA 76
FVQAIVTGKGP+ENL+
Sbjct: 151 FVQAIVTGKGPIENLS 166
>gi|49473448|gb|AAT66413.1| chloroplast light-harvesting complex II, partial [Chlorella
pyrenoidosa]
Length = 179
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/93 (73%), Positives = 73/93 (78%), Gaps = 3/93 (3%)
Query: 1 MGAVEGYRIAGGP---LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 57
MGA E YR GG GE D LYPGG+FDPLGLADDP+ AELKVKEIKNGRLAMFSM
Sbjct: 87 MGAAESYRANGGAPGGFGEDLDSLYPGGAFDPLGLADDPDTLAELKVKEIKNGRLAMFSM 146
Query: 58 FGFFVQAIVTGKGPLENLADHLADPVNNNAWAY 90
FGFFVQAIVTG+GP+ NL HL+DP NNAW Y
Sbjct: 147 FGFFVQAIVTGQGPIANLDAHLSDPTGNNAWNY 179
>gi|159484394|ref|XP_001700243.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
gi|158272559|gb|EDO98358.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
Length = 266
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/75 (88%), Positives = 70/75 (93%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYR+ GGPLGE D LYPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 160 MGAIEGYRVNGGPLGEGLDKLYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 219
Query: 61 FVQAIVTGKGPLENL 75
FVQAIVTGKGPL+NL
Sbjct: 220 FVQAIVTGKGPLQNL 234
>gi|260914751|gb|ACX54226.1| chlorophyll A/B binding protein [Jatropha curcas]
Length = 261
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/74 (87%), Positives = 70/74 (94%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE DP+YPGG+FDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLEN 74
FVQAIVTGKGP+EN
Sbjct: 228 FVQAIVTGKGPIEN 241
>gi|307106008|gb|EFN54255.1| hypothetical protein CHLNCDRAFT_56227 [Chlorella variabilis]
Length = 248
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/89 (73%), Positives = 72/89 (80%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGP GE D LYPG +FDPLGLADDP+ F+ELKVKE+KNGRLAM SMFGF
Sbjct: 149 MGLIEGYRVNGGPAGEGLDALYPGEAFDPLGLADDPDTFSELKVKELKNGRLAMVSMFGF 208
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWA 89
FVQ IVT KGP+ENL DHLA P N WA
Sbjct: 209 FVQGIVTKKGPIENLNDHLASPDATNFWA 237
>gi|8925556|gb|AAF81519.1|AF268321_1 light-harvesting complex protein LHCG12 [Bigelowiella natans]
gi|145079012|tpg|DAA05893.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm7 [Bigelowiella natans]
Length = 346
Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/98 (68%), Positives = 75/98 (76%), Gaps = 2/98 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG E YR+ GGP GE D + PGG+FDPLGLADDP+ FAELKVKEIKNGRLAMFSM GF
Sbjct: 249 MGGAEAYRVNGGPAGEGLDAINPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMLGF 308
Query: 61 FVQAIVTGKGPLENLADHLADP--VNNNAWAYATNFVP 96
+VQAI TGKGP+EN A+H+ADP VN AT F P
Sbjct: 309 YVQAIATGKGPVENWAEHIADPAGVNGLTNGIATKFTP 346
>gi|8925554|gb|AAF81518.1|AF268320_1 light-harvesting complex protein LHCG11 [Bigelowiella natans]
gi|145078995|tpg|DAA05892.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm3 [Bigelowiella natans]
Length = 333
Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/98 (68%), Positives = 75/98 (76%), Gaps = 2/98 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG E YR+ GGP GE D + PGG+FDPLGLADDP+ FAELKVKEIKNGRLAMFSM GF
Sbjct: 236 MGGAEAYRVNGGPAGEGLDAINPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMLGF 295
Query: 61 FVQAIVTGKGPLENLADHLADP--VNNNAWAYATNFVP 96
+VQAI TGKGP+EN A+H+ADP VN AT F P
Sbjct: 296 YVQAIATGKGPVENWAEHIADPAGVNGLTNGIATKFTP 333
>gi|307110329|gb|EFN58565.1| hypothetical protein CHLNCDRAFT_59584 [Chlorella variabilis]
Length = 249
Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 76/95 (80%), Gaps = 1/95 (1%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
M VEGYR+ GGP G D +YPGGSFDPLGLADDP+ F+ELKVKEIKNGRLAM SMFGF
Sbjct: 154 MSYVEGYRVNGGPAGTGLDAVYPGGSFDPLGLADDPDTFSELKVKEIKNGRLAMLSMFGF 213
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWA-YATNF 94
F+QAIVTG+GP+ENL HLAD NN ++ YA+
Sbjct: 214 FIQAIVTGEGPIENLNKHLADASANNFYSLYASTL 248
>gi|193875804|gb|ACF24538.1| light harvesting complex protein LHCII-3 [Gymnochlora stellata]
Length = 300
Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/96 (67%), Positives = 74/96 (77%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA E YR GGPLGE D LYPGG+FDPLG A DP AELKVKEIKNGRLAM +M G+
Sbjct: 205 MGASEAYRFNGGPLGEPADVLYPGGAFDPLGFAKDPSKAAELKVKEIKNGRLAMTAMLGY 264
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
+VQA+ TGKGP+ENL++HLADP NN +A A F P
Sbjct: 265 YVQALATGKGPIENLSEHLADPSKNNGFAVAGVFTP 300
>gi|384249593|gb|EIE23074.1| putative chlorophyll a/b-binding protein, chloroplast precursor
[Coccomyxa subellipsoidea C-169]
Length = 210
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/97 (72%), Positives = 74/97 (76%), Gaps = 1/97 (1%)
Query: 1 MGAVEGYRIAGGPLG-EVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MG+ E YR AG G + D LYPGG FDPL A DP+ AELKVKEIKNGRLAMFSMFG
Sbjct: 114 MGSAEAYRAAGSAPGVDGLDKLYPGGPFDPLEFASDPDTLAELKVKEIKNGRLAMFSMFG 173
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
FFVQAIVTGKGPLENL DHLA P NN +A AT FVP
Sbjct: 174 FFVQAIVTGKGPLENLNDHLASPYANNGFAAATKFVP 210
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 12 GPLGEVTDPLYPGGSF------DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 65
GPL T P Y G F D GL+ DPE FA + E+ + R AM G +
Sbjct: 5 GPLSSAT-PSYLNGEFPGDYGWDTAGLSADPETFARYREIEVIHARWAMLGALGCLTPEL 63
Query: 66 VTGKG 70
++ G
Sbjct: 64 LSQNG 68
>gi|297740654|emb|CBI30836.3| unnamed protein product [Vitis vinifera]
Length = 110
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/98 (72%), Positives = 71/98 (72%), Gaps = 27/98 (27%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV KEIKNGRLAMFSMFGF
Sbjct: 40 MGAVEGYRIAGGPLGEV---------------------------KEIKNGRLAMFSMFGF 72
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 73 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 110
>gi|297740653|emb|CBI30835.3| unnamed protein product [Vitis vinifera]
Length = 148
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/98 (72%), Positives = 71/98 (72%), Gaps = 27/98 (27%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV KEIKNGRLAMFSMFGF
Sbjct: 78 MGAVEGYRIAGGPLGEV---------------------------KEIKNGRLAMFSMFGF 110
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 111 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 148
>gi|163914163|dbj|BAF95850.1| putative chloroplast chlorophyll a/b binding protein [Vitis hybrid
cultivar]
Length = 234
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/67 (97%), Positives = 65/67 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRI GGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIGGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVT 67
FVQAIVT
Sbjct: 228 FVQAIVT 234
>gi|302143545|emb|CBI22106.3| unnamed protein product [Vitis vinifera]
Length = 147
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/98 (72%), Positives = 71/98 (72%), Gaps = 27/98 (27%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV KEIKNGRLAMFSMFGF
Sbjct: 77 MGAVEGYRIAGGPLGEV---------------------------KEIKNGRLAMFSMFGF 109
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 110 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 147
>gi|193875800|gb|ACF24536.1| light harvesting complex protein LHCII-1 [Gymnochlora stellata]
Length = 335
Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/86 (72%), Positives = 70/86 (81%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG E YR+ GGP GE D + PGG+FDPLGLADDP+ FAELKVKEIKNGRLAMFSM GF
Sbjct: 233 MGGAEAYRVNGGPAGEGLDAINPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMLGF 292
Query: 61 FVQAIVTGKGPLENLADHLADPVNNN 86
+VQAI TGKGP+EN A+H+ADP N
Sbjct: 293 YVQAIATGKGPVENWAEHIADPSGVN 318
>gi|116792703|gb|ABK26463.1| unknown [Picea sitchensis]
Length = 251
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/98 (69%), Positives = 71/98 (72%), Gaps = 27/98 (27%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYR+AGGPLGEV KE+KNGRLAMFSMFGF
Sbjct: 181 MGAIEGYRVAGGPLGEV---------------------------KELKNGRLAMFSMFGF 213
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 214 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 251
>gi|15637137|gb|AAL04435.1| chlorophyll a/b binding protein [Beta vulgaris]
Length = 168
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/69 (92%), Positives = 65/69 (94%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAM SMFGF
Sbjct: 93 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMSSMFGF 152
Query: 61 FVQAIVTGK 69
FVQAIV K
Sbjct: 153 FVQAIVLVK 161
>gi|297744047|emb|CBI37017.3| unnamed protein product [Vitis vinifera]
Length = 183
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/98 (71%), Positives = 70/98 (71%), Gaps = 27/98 (27%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRI GGPLGEV KEIKNGRLAMFSMFGF
Sbjct: 113 MGAVEGYRIGGGPLGEV---------------------------KEIKNGRLAMFSMFGF 145
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 146 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 183
>gi|510388|emb|CAA43633.1| light harvesting chlorophyll a /b binding protein of PSII [Euglena
gracilis]
Length = 1055
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/96 (68%), Positives = 72/96 (75%), Gaps = 2/96 (2%)
Query: 1 MGAVEGYRIAG--GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MGAVE YR AG G G DPLYPGG FDPLGLADDPEAF ELKVKE+KNGRLAM ++F
Sbjct: 957 MGAVEAYRSAGSVGDFGADLDPLYPGGPFDPLGLADDPEAFLELKVKEVKNGRLAMVAIF 1016
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 94
GFFVQ I+TGKGP+EN DHL DP NN + F
Sbjct: 1017 GFFVQGILTGKGPVENWVDHLTDPFVNNIFQLTPGF 1052
Score = 127 bits (320), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/96 (67%), Positives = 72/96 (75%), Gaps = 2/96 (2%)
Query: 1 MGAVEGYRIAG--GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MGAVE YR AG G G DPLYPGG FDPLGLADDPEAF ELKVKE+KNGRLAM ++F
Sbjct: 17 MGAVEAYRSAGSVGDFGADLDPLYPGGPFDPLGLADDPEAFLELKVKEVKNGRLAMVAIF 76
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 94
GF VQ I+TGKGP+EN DHL DP NN + + F
Sbjct: 77 GFSVQGILTGKGPVENWVDHLTDPFENNLFQLTSGF 112
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/96 (62%), Positives = 71/96 (73%), Gaps = 2/96 (2%)
Query: 1 MGAVEGYRIAGG--PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MGAVE YR GG G D LYPGG FDPLGLA+DP+A AELKVKE+KNGRLAM +M
Sbjct: 254 MGAVEAYRYGGGVGDFGRELDTLYPGGPFDPLGLANDPDALAELKVKELKNGRLAMVAML 313
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 94
GF+VQ +VT GP+ENL HLADP NN +++ + F
Sbjct: 314 GFYVQPLVTKAGPVENLTFHLADPSANNIFSFTSGF 349
Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/96 (62%), Positives = 71/96 (73%), Gaps = 2/96 (2%)
Query: 1 MGAVEGYRIAGG--PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MGAVE YR GG G D LYPGG FDPLGLA+DP+A AELKVKE+KNGRLAM +M
Sbjct: 715 MGAVEAYRYGGGVGDSGRELDTLYPGGPFDPLGLANDPDALAELKVKELKNGRLAMVAML 774
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 94
GF+VQ +VT GP+ENL HLADP NN +++ + F
Sbjct: 775 GFYVQPLVTKAGPVENLTFHLADPSANNIFSFTSGF 810
Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 67/90 (74%), Gaps = 1/90 (1%)
Query: 3 AVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
A E +R AG GPLG+ D YPGG FDPLGL+ DP AFAE KVKE+KNGRLAM +M G F
Sbjct: 482 AAETWREAGEGPLGKAQDKSYPGGVFDPLGLSKDPAAFAEAKVKEVKNGRLAMLAMLGLF 541
Query: 62 VQAIVTGKGPLENLADHLADPVNNNAWAYA 91
VQA VTG+ PLENL+ HLA+P N +YA
Sbjct: 542 VQAGVTGQSPLENLSAHLANPGVNFWTSYA 571
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 9 IAGGPLGEVTDPLYPGG-SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT 67
++GG + E Y G FD GLA DP+ F + E++NGR AM + G +++
Sbjct: 371 LSGGAVPEYLKGEYAGDYGFDTAGLAADPKLFQRYRDAELQNGRWAMLGVLGCLAPEVLS 430
>gi|310696692|gb|ADP06401.1| putative chlorophyll A/B binding protein [Hevea brasiliensis]
Length = 175
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/64 (98%), Positives = 64/64 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 112 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 171
Query: 61 FVQA 64
FVQA
Sbjct: 172 FVQA 175
>gi|157987285|gb|ABW07804.1| light-harvesting chlorphyll binding protein 3 [Solenostemon
scutellarioides]
Length = 193
Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 71/89 (79%), Positives = 74/89 (83%), Gaps = 3/89 (3%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEG+RI G +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 94 MGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 152
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNA 87
GFFVQAIVTGKGPLENL DHL +PV NNA
Sbjct: 153 GFFVQAIVTGKGPLENLLDHLDNPVANNA 181
>gi|169195|gb|AAA33701.1| Major Cab protein [Petunia x hybrida]
Length = 62
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/62 (96%), Positives = 61/62 (98%)
Query: 37 EAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 96
EAFAELKVKEIKNGRLA FSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVP
Sbjct: 1 EAFAELKVKEIKNGRLAAFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVP 60
Query: 97 GK 98
GK
Sbjct: 61 GK 62
>gi|13676406|dbj|BAB41192.1| type I chlorophyll a/b-binding protein b [Amaranthus tricolor]
Length = 154
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/62 (96%), Positives = 61/62 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 93 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGF 152
Query: 61 FV 62
FV
Sbjct: 153 FV 154
>gi|13676402|dbj|BAB41190.1| type I chlorophyll a/b-binding protein a [Amaranthus tricolor]
Length = 154
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/62 (96%), Positives = 61/62 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 93 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGF 152
Query: 61 FV 62
FV
Sbjct: 153 FV 154
>gi|145079253|tpg|DAA05906.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm8 [Acetabularia acetabulum]
Length = 220
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/72 (80%), Positives = 64/72 (88%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +E YR+ GGPLGE DPL+PG FDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 149 MGLIEAYRVNGGPLGEGLDPLHPGDKFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 208
Query: 61 FVQAIVTGKGPL 72
+VQAIVTGKGP+
Sbjct: 209 YVQAIVTGKGPI 220
>gi|157965839|gb|ABW06956.1| chloroplast light-harvesting complex II protein precursor [Euglena
gracilis]
Length = 468
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/100 (66%), Positives = 74/100 (74%), Gaps = 4/100 (4%)
Query: 1 MGAVEGYRIAGG--PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MGA E YR G G+ D LYPGG FDPLGLA+DP+ AELKVKEIKNGRLAMF+MF
Sbjct: 119 MGAAEAYRTGNGLGNFGKDLDSLYPGGPFDPLGLANDPDTLAELKVKEIKNGRLAMFAMF 178
Query: 59 GFFVQAIVTGKGPLENLADHLADP--VNNNAWAYATNFVP 96
GF+VQAIVTG+ PLENL+ HLA P VN AY T F+P
Sbjct: 179 GFYVQAIVTGESPLENLSAHLASPFTVNGLNAAYMTQFMP 218
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/101 (64%), Positives = 71/101 (70%), Gaps = 5/101 (4%)
Query: 1 MGAVEGYR---IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 57
MGAVE YR A G GE D LYPGG FDPLGLADDP+ FAELKVKEIKNGRLAM +M
Sbjct: 362 MGAVEAYRAGNTAPGQFGEDLDRLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAMVAM 421
Query: 58 FGFFVQAIVTGKGPLENLADHLADPVNNNAW--AYATNFVP 96
GF+ QAIVTG+GP+EN HL DP +N A T F P
Sbjct: 422 LGFYAQAIVTGEGPVENWLYHLQDPSAHNGLTAALVTQFAP 462
>gi|116793607|gb|ABK26807.1| unknown [Picea sitchensis]
Length = 125
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/64 (89%), Positives = 60/64 (93%)
Query: 35 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 94
D + ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWAYATNF
Sbjct: 62 DRVLYLELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNF 121
Query: 95 VPGK 98
VPGK
Sbjct: 122 VPGK 125
>gi|145078806|tpg|DAA05885.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm5 [Euglena gracilis]
Length = 695
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/100 (66%), Positives = 73/100 (73%), Gaps = 4/100 (4%)
Query: 1 MGAVEGYRIAGG--PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MGA E YR G G+ D LYPGG FDPLGLA+DP+ AELKVKEIKNGRLAMF+MF
Sbjct: 346 MGAAEAYRTGNGLGNFGKDLDSLYPGGPFDPLGLANDPDTLAELKVKEIKNGRLAMFAMF 405
Query: 59 GFFVQAIVTGKGPLENLADHLADP--VNNNAWAYATNFVP 96
GF+VQAIVTG+ PLENL+ HLA P VN AY T F P
Sbjct: 406 GFYVQAIVTGESPLENLSAHLASPFTVNGLNAAYMTQFTP 445
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/101 (64%), Positives = 71/101 (70%), Gaps = 5/101 (4%)
Query: 1 MGAVEGYR---IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 57
MGAVE YR A G GE D LYPGG FDPLGLADDP+ FAELKVKEIKNGRLAM +M
Sbjct: 589 MGAVEAYRAGNTAPGQFGEDLDRLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAMMAM 648
Query: 58 FGFFVQAIVTGKGPLENLADHLADPVNNNAW--AYATNFVP 96
GF+ QAIVTG+GP+EN HL DP +N A T F P
Sbjct: 649 LGFYAQAIVTGEGPVENWLYHLQDPSAHNGLTAALVTQFAP 689
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/101 (64%), Positives = 71/101 (70%), Gaps = 5/101 (4%)
Query: 1 MGAVEGYR---IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 57
MGAVE YR A G GE D LYPGG FDPLGLADDP+ FAELKVKEIKNGRLAM +M
Sbjct: 105 MGAVEAYRAGNTAPGQFGEDLDRLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAMVAM 164
Query: 58 FGFFVQAIVTGKGPLENLADHLADPVNNNAW--AYATNFVP 96
GF+ QAIVTG+GP+EN HL DP +N A T F P
Sbjct: 165 LGFYAQAIVTGEGPVENWLYHLQDPSAHNGLTAALVTQFAP 205
>gi|145079288|tpg|DAA05908.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm10 [Acetabularia acetabulum]
Length = 224
Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/68 (83%), Positives = 62/68 (91%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+E YR+ GGPLGE DPLYPGG FDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 157 MGAIEAYRVNGGPLGEGLDPLYPGGQFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 216
Query: 61 FVQAIVTG 68
+VQA+VTG
Sbjct: 217 YVQALVTG 224
>gi|157965835|gb|ABW06954.1| chloroplast light-harvesting complex II protein precursor [Euglena
gracilis]
Length = 545
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/96 (62%), Positives = 72/96 (75%), Gaps = 2/96 (2%)
Query: 1 MGAVEGYRIAGG--PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MGAVE YR GG G D LYPGG FDPLGLA+DP+A AELKVKE+KNGRLAM +M
Sbjct: 217 MGAVEAYRYGGGVGDFGRELDTLYPGGPFDPLGLANDPDALAELKVKELKNGRLAMVAML 276
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 94
GF+VQ +VT GP+ENL HLADP +NN +++ + F
Sbjct: 277 GFYVQPLVTKAGPVENLTFHLADPSSNNIFSFTSGF 312
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/96 (62%), Positives = 72/96 (75%), Gaps = 2/96 (2%)
Query: 1 MGAVEGYRIAGG--PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MGAVE YR GG G D LYPGG FDPLGLA+DP+A AELKVKE+KNGRLAM +M
Sbjct: 447 MGAVEAYRYGGGVGDFGRELDTLYPGGPFDPLGLANDPDALAELKVKELKNGRLAMVAML 506
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 94
GF+VQ +VT GP+ENL HLADP +NN +++ + F
Sbjct: 507 GFYVQPLVTKAGPVENLTFHLADPSSNNIFSFTSGF 542
Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 62/76 (81%)
Query: 19 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 78
D LYPGG FDPLGLA+DP+A AELKVKE+KNGRLAM +M GF+VQ +VT GP+ENL H
Sbjct: 2 DTLYPGGPFDPLGLANDPDALAELKVKELKNGRLAMVAMLGFYVQPLVTKAGPVENLTFH 61
Query: 79 LADPVNNNAWAYATNF 94
LADP +NN +++ + F
Sbjct: 62 LADPSSNNIFSFTSGF 77
>gi|145078761|tpg|DAA05883.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm4 [Euglena gracilis]
Length = 367
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/96 (62%), Positives = 72/96 (75%), Gaps = 2/96 (2%)
Query: 1 MGAVEGYRIAGG--PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MGAVE YR GG G D LYPGG FDPLGLA+DP+A AELKVKE+KNGRLAM +M
Sbjct: 165 MGAVEAYRYGGGVGDFGRELDTLYPGGPFDPLGLANDPDALAELKVKELKNGRLAMVAML 224
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 94
GF+VQ +VT GP+ENL HLADP +NN +++ + F
Sbjct: 225 GFYVQPLVTKAGPVENLTFHLADPSSNNIFSFTSGF 260
>gi|302142798|emb|CBI20093.3| unnamed protein product [Vitis vinifera]
Length = 84
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/93 (69%), Positives = 65/93 (69%), Gaps = 27/93 (29%)
Query: 6 GYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 65
GYRI GGPLGEV KEIKNGRLAMFSMFGFFVQAI
Sbjct: 19 GYRIGGGPLGEV---------------------------KEIKNGRLAMFSMFGFFVQAI 51
Query: 66 VTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
VTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 52 VTGKGPLENLADHLADPVNNNAWAYATNFVPGK 84
>gi|307103850|gb|EFN52107.1| hypothetical protein CHLNCDRAFT_32733 [Chlorella variabilis]
Length = 255
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/98 (68%), Positives = 74/98 (75%), Gaps = 4/98 (4%)
Query: 1 MGAVEGYRIAG-GP--LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 57
MGAVE YR G GP GE D LYPGG+FDPLGLADDP+ AELKVKE+KNGRLAM SM
Sbjct: 157 MGAVEIYRANGEGPSGFGEGQDNLYPGGAFDPLGLADDPDTLAELKVKELKNGRLAMMSM 216
Query: 58 FGFFVQAIVTGKGPLENLADHLADPVNNNAWA-YATNF 94
GFFVQAIVTGKGPL+NL HL +P N +A YA+
Sbjct: 217 LGFFVQAIVTGKGPLDNLLTHLEEPGEFNFYANYASTL 254
>gi|115769|sp|P12327.1|CB21_EUGGR RecName: Full=Chlorophyll a-b binding protein of LHCII type 1;
AltName: Full=Chlorophyll a-b binding protein of LHCII
type I; Short=CAB; Short=LHCP
gi|829262|emb|CAA29821.1| chlorophyll a/b protein (128 AA) [Euglena gracilis]
Length = 127
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/100 (65%), Positives = 70/100 (70%), Gaps = 4/100 (4%)
Query: 1 MGAVEGYR---IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 57
MGAVEGYR A G GE D LYPGG FDPLGLADDP+ F ELKVKEIKNGRLAM M
Sbjct: 22 MGAVEGYRAGNTAPGQFGEDLDRLYPGGPFDPLGLADDPDTFPELKVKEIKNGRLAMSGM 81
Query: 58 FGFFVQAIVTGKGPLENLADHLADP-VNNNAWAYATNFVP 96
GF+ QAIVTG+GP+EN HL DP +N A T F P
Sbjct: 82 LGFYAQAIVTGEGPVENWLYHLQDPSAHNGLTALVTQFAP 121
>gi|323388125|gb|ADX60322.1| chlorophyll a-b binding protein of LHCII [Furcellaria
lumbricalis]
Length = 86
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 66/79 (83%)
Query: 16 EVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
E DPLYPG +FDPLGLADDP+ FAELK KEIKNGRLA FSMFG+FVQA+ TGKGP++N
Sbjct: 1 EGLDPLYPGEAFDPLGLADDPDTFAELKTKEIKNGRLAQFSMFGYFVQALQTGKGPVQNW 60
Query: 76 ADHLADPVNNNAWAYATNF 94
++H+ADP N N + YAT F
Sbjct: 61 SEHVADPWNVNGFNYATKF 79
>gi|145079190|tpg|DAA05903.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm11 [Acetabularia acetabulum]
Length = 224
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/68 (80%), Positives = 61/68 (89%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+E YR+ GGPLGE DPLYPG FDPLGLADDP+ FAELK+KEIKNGRLAMFSMFGF
Sbjct: 157 MGAIEAYRVNGGPLGEGLDPLYPGDKFDPLGLADDPDTFAELKIKEIKNGRLAMFSMFGF 216
Query: 61 FVQAIVTG 68
+VQA+VTG
Sbjct: 217 YVQAVVTG 224
>gi|145078711|tpg|DAA05881.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm1 [Euglena gracilis]
Length = 642
Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/96 (62%), Positives = 71/96 (73%), Gaps = 2/96 (2%)
Query: 1 MGAVEGYRIAGG--PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MGAVE YR GG G D LYPGG FDPLGLA+DP+A AELKVKE+KNGRLAM +M
Sbjct: 50 MGAVEAYRYGGGVGDFGRELDTLYPGGPFDPLGLANDPDALAELKVKELKNGRLAMVAML 109
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 94
GF+VQ +VT GP+ENL HLADP NN +++ + F
Sbjct: 110 GFYVQPLVTKAGPVENLTFHLADPSANNIFSFTSGF 145
Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/96 (62%), Positives = 71/96 (73%), Gaps = 2/96 (2%)
Query: 1 MGAVEGYRIAGG--PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MGAVE YR GG G D LYPGG FDPLGLA+DP+A AELKVKE+KNGRLAM +M
Sbjct: 511 MGAVEAYRYGGGVGDFGRELDTLYPGGPFDPLGLANDPDALAELKVKELKNGRLAMVAML 570
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 94
GF+VQ +VT GP+ENL HLADP NN +++ + F
Sbjct: 571 GFYVQPLVTKAGPVENLTFHLADPSANNIFSFTSGF 606
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 67/90 (74%), Gaps = 1/90 (1%)
Query: 3 AVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
A E +R AG GPLG+ D YPGG FDPLGL+ DP AFAE KVKE+KNGRLAM +M G F
Sbjct: 278 AAETWREAGEGPLGKAQDKSYPGGVFDPLGLSKDPAAFAEAKVKEVKNGRLAMLAMLGLF 337
Query: 62 VQAIVTGKGPLENLADHLADPVNNNAWAYA 91
VQA VTG+ PLENL+ HLA+P N +YA
Sbjct: 338 VQAGVTGQSPLENLSAHLANPGVNFWTSYA 367
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 9 IAGGPLGEVTDPLYPGG-SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT 67
++GG + E Y G FD GLA DP+ F + E++NGR AM + G +++
Sbjct: 167 LSGGAVPEYLKGEYAGDYGFDTAGLAADPKLFQRYRDAELQNGRWAMLGVLGCLAPEVLS 226
>gi|117663141|gb|ABK55743.1| chloroplast type III LHCII CAB precursor protein [Cucumis
sativus]
Length = 84
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/84 (79%), Positives = 69/84 (82%), Gaps = 3/84 (3%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
M VEG+RI G +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 2 MVLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 60
Query: 59 GFFVQAIVTGKGPLENLADHLADP 82
GFFVQAIVTGKGPLENL DHL DP
Sbjct: 61 GFFVQAIVTGKGPLENLLDHLDDP 84
>gi|296085004|emb|CBI28419.3| unnamed protein product [Vitis vinifera]
Length = 172
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/59 (93%), Positives = 56/59 (94%)
Query: 40 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 114 VELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLVDHLADPVANNAWAYATNFVPGK 172
>gi|15487754|gb|AAL00920.1|AF398742_1 ASCAB9 [Centromadia pungens]
Length = 171
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 66/85 (77%), Gaps = 2/85 (2%)
Query: 2 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMFSMF FF
Sbjct: 74 GGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSMFAFF 131
Query: 62 VQAIVTGKGPLENLADHLADPVNNN 86
+QA VTG+GP+ENLA HL+DP NN
Sbjct: 132 IQAYVTGQGPVENLASHLSDPFGNN 156
>gi|15487728|gb|AAL00907.1|AF398729_1 ASCAB9-A [Dubautia raillardioides]
Length = 171
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 66/85 (77%), Gaps = 2/85 (2%)
Query: 2 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMFSMF FF
Sbjct: 74 GGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSMFAFF 131
Query: 62 VQAIVTGKGPLENLADHLADPVNNN 86
+QA VTG+GP+ENLA HL+DP NN
Sbjct: 132 IQAYVTGQGPVENLASHLSDPFGNN 156
>gi|168000216|ref|XP_001752812.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168000420|ref|XP_001752914.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695975|gb|EDQ82316.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696077|gb|EDQ82418.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 227
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/87 (67%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
+G E YR PLG D L+PGG+FDPLGLA DP+ FA LKVKEIKNGRLAMFSM G
Sbjct: 126 VGGAEYYRSTNKSPLGSDLDRLHPGGAFDPLGLAKDPDQFALLKVKEIKNGRLAMFSMLG 185
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNN 86
FFVQA VTG+GP+ENL+ HL+DP NN
Sbjct: 186 FFVQAYVTGEGPVENLSAHLSDPFGNN 212
>gi|156046250|gb|ABU42593.1| ASCAB9 [Dubautia arborea]
Length = 171
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 66/85 (77%), Gaps = 2/85 (2%)
Query: 2 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMFSMF FF
Sbjct: 74 GGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSMFAFF 131
Query: 62 VQAIVTGKGPLENLADHLADPVNNN 86
+QA VTG+GP+ENLA HL+DP NN
Sbjct: 132 IQAYVTGQGPVENLASHLSDPFGNN 156
>gi|15487738|gb|AAL00912.1|AF398734_1 ASCAB9-C [Argyroxiphium sandwicense]
gi|15487744|gb|AAL00915.1|AF398737_1 ASCAB9-C [Dubautia laxa]
Length = 171
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 66/85 (77%), Gaps = 2/85 (2%)
Query: 2 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMFSMF FF
Sbjct: 74 GGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSMFAFF 131
Query: 62 VQAIVTGKGPLENLADHLADPVNNN 86
+QA VTG+GP+ENLA HL+DP NN
Sbjct: 132 IQAYVTGQGPVENLASHLSDPFGNN 156
>gi|15487716|gb|AAL00901.1|AF398723_1 ASCAB9-A [Argyroxiphium caliginis]
gi|15487720|gb|AAL00903.1|AF398725_1 ASCAB9-A [Dubautia laevigata]
gi|15487726|gb|AAL00906.1|AF398728_1 ASCAB9-A [Dubautia plantaginea]
gi|15487730|gb|AAL00908.1|AF398730_1 ASCAB9-A [Dubautia sherffiana]
gi|15487732|gb|AAL00909.1|AF398731_1 ASCAB9-A [Wilkesia gymnoxiphium]
gi|15487734|gb|AAL00910.1|AF398732_1 ASCAB9-B [Argyroxiphium caliginis]
gi|15487736|gb|AAL00911.1|AF398733_1 ASCAB9-B [Argyroxiphium sandwicense]
gi|15487740|gb|AAL00913.1|AF398735_1 ASCAB9-B [Dubautia laevigata]
gi|15487742|gb|AAL00914.1|AF398736_1 ASCAB9-C [Dubautia latifolia]
gi|15487746|gb|AAL00916.1|AF398738_1 ASCAB9-B [Dubautia plantaginea]
gi|15487748|gb|AAL00917.1|AF398739_1 ASCAB9-C [Dubautia scabra]
gi|15487750|gb|AAL00918.1|AF398740_1 ASCAB9-B [Wilkesia gymnoxiphium]
gi|15487758|gb|AAL00922.1|AF398744_1 ASCAB9 [Harmonia nutans]
gi|15487760|gb|AAL00923.1|AF398745_1 ASCAB9 [Osmadenia tenella]
gi|15487764|gb|AAL00925.1|AF398747_1 ASCAB9 [Anisocarpus scabridus]
gi|156046244|gb|ABU42590.1| ASCAB9 [Dubautia arborea]
gi|156046246|gb|ABU42591.1| ASCAB9 [Dubautia arborea]
Length = 171
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 66/85 (77%), Gaps = 2/85 (2%)
Query: 2 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMFSMF FF
Sbjct: 74 GGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSMFAFF 131
Query: 62 VQAIVTGKGPLENLADHLADPVNNN 86
+QA VTG+GP+ENLA HL+DP NN
Sbjct: 132 IQAYVTGQGPVENLASHLSDPFGNN 156
>gi|15487752|gb|AAL00919.1|AF398741_1 ASCAB9-C [Wilkesia gymnoxiphium]
Length = 171
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 66/85 (77%), Gaps = 2/85 (2%)
Query: 2 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMFSMF FF
Sbjct: 74 GGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSMFAFF 131
Query: 62 VQAIVTGKGPLENLADHLADPVNNN 86
+QA VTG+GP+ENLA HL+DP NN
Sbjct: 132 IQAYVTGQGPVENLASHLSDPFGNN 156
>gi|156046252|gb|ABU42594.1| ASCAB9 [Dubautia arborea]
Length = 171
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 66/85 (77%), Gaps = 2/85 (2%)
Query: 2 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMFSMF FF
Sbjct: 74 GGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSMFAFF 131
Query: 62 VQAIVTGKGPLENLADHLADPVNNN 86
+QA VTG+GP+ENLA H++DP NN
Sbjct: 132 IQAYVTGQGPVENLASHMSDPFGNN 156
>gi|77799148|gb|ABB03717.1| putative chloroplast chlorophyll A-B binding protein type I
[Sorghum bicolor]
Length = 61
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/55 (98%), Positives = 55/55 (100%)
Query: 44 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
VKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 7 VKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 61
>gi|356510907|ref|XP_003524175.1| PREDICTED: uncharacterized protein LOC100789010 [Glycine max]
Length = 320
Score = 114 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMF+M GF
Sbjct: 222 VGGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAMLGF 279
Query: 61 FVQAIVTGKGPLENLADHLADPVNNN 86
+ QA VTG+GP+ENLA HL+DP NN
Sbjct: 280 YFQAYVTGEGPVENLAKHLSDPFGNN 305
>gi|405615|emb|CAA43803.1| LHC II Type III chlorophyll a/b binding protein [Brassica napus]
Length = 267
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/99 (67%), Positives = 72/99 (72%), Gaps = 4/99 (4%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEG+RI +GE D LYPGG FD L L DD F ELKVKEIKNG LAMFSMF
Sbjct: 168 MGLVEGFRINRFDGVGEGND-LYPGGKYFDLLSLVDDQVTFVELKVKEIKNGMLAMFSMF 226
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNN-NAWAYATNFVP 96
GFFVQAIVTGK PLE+L DHL + V N NAWA+ T FVP
Sbjct: 227 GFFVQAIVTGKDPLESLLDHLDNFVANINAWAFTTKFVP 265
>gi|168068370|ref|XP_001786045.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662226|gb|EDQ49142.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 207
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/87 (66%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
+G E YR PLG D L+PGG+FDPLGLA DP+ FA LKVKEI NGRLAMFSM G
Sbjct: 106 VGGSEYYRSTNKSPLGSDLDRLHPGGAFDPLGLAKDPDQFALLKVKEIMNGRLAMFSMLG 165
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNN 86
FFV+A VTG+GP+ENLA HL+DP NN
Sbjct: 166 FFVKAYVTGEGPVENLAAHLSDPFGNN 192
>gi|15487718|gb|AAL00902.1|AF398724_1 ASCAB9-A [Argyroxiphium sandwicense]
Length = 171
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 66/85 (77%), Gaps = 2/85 (2%)
Query: 2 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMFSMF FF
Sbjct: 74 GGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSMFAFF 131
Query: 62 VQAIVTGKGPLENLADHLADPVNNN 86
++A VTG+GP+ENLA HL+DP NN
Sbjct: 132 IKAYVTGQGPVENLASHLSDPFGNN 156
>gi|15487724|gb|AAL00905.1|AF398727_1 ASCAB9-A [Dubautia laxa]
Length = 171
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 66/85 (77%), Gaps = 2/85 (2%)
Query: 2 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMFSMF FF
Sbjct: 74 GGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSMFAFF 131
Query: 62 VQAIVTGKGPLENLADHLADPVNNN 86
++A VTG+GP+ENLA HL+DP NN
Sbjct: 132 IKAYVTGQGPVENLASHLSDPFGNN 156
>gi|156046248|gb|ABU42592.1| ASCAB9 [Dubautia arborea]
Length = 171
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 66/85 (77%), Gaps = 2/85 (2%)
Query: 2 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMFSMF FF
Sbjct: 74 GGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSMFAFF 131
Query: 62 VQAIVTGKGPLENLADHLADPVNNN 86
+QA VTG+GP+E+LA HL+DP NN
Sbjct: 132 IQAYVTGQGPVESLASHLSDPFGNN 156
>gi|15487756|gb|AAL00921.1|AF398743_1 ASCAB9 [Deinandra lobbii]
Length = 171
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
Query: 2 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMFSMF FF
Sbjct: 74 GGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSMFAFF 131
Query: 62 VQAIVTGKGPLENLADHLADPVNNN 86
+QA VTG+ P+ENLA HL+DP NN
Sbjct: 132 IQAYVTGQCPVENLASHLSDPFGNN 156
>gi|15487762|gb|AAL00924.1|AF398746_1 ASCAB9 [Carlquistia muirii]
Length = 171
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
Query: 2 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMFSMF FF
Sbjct: 74 GGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSMFAFF 131
Query: 62 VQAIVTGKGPLENLADHLADPVNNN 86
+QA V G+GP+ENLA HL+DP NN
Sbjct: 132 IQAYVAGQGPVENLASHLSDPFGNN 156
>gi|15487722|gb|AAL00904.1|AF398726_1 ASCAB9-A [Dubautia latifolia]
Length = 171
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
Query: 2 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
G E YRI G ++ D L+ GG FDPLGLA DP+ FA LKVKEIKNGRLAMFSMF FF
Sbjct: 74 GGAEYYRIINGL--DLEDKLHHGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSMFAFF 131
Query: 62 VQAIVTGKGPLENLADHLADPVNNN 86
+QA VTG+GP+ENLA HL+DP NN
Sbjct: 132 IQAYVTGQGPVENLASHLSDPFGNN 156
>gi|162461137|ref|NP_001105374.1| chlorophyll a/b-binding apoprotein CP26 precursor [Zea mays]
gi|733456|gb|AAA64415.1| chlorophyll a/b-binding apoprotein CP26 precursor [Zea mays]
Length = 283
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 66/86 (76%), Gaps = 2/86 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSMF F
Sbjct: 185 VGGAEYYRITNGL--DLEDKLHPGGPFDPLGLASDPDQAAILKVKEIKNGRLAMFSMFAF 242
Query: 61 FVQAIVTGKGPLENLADHLADPVNNN 86
F+QA VTG+GP+ENLA HL+DP NN
Sbjct: 243 FIQAYVTGEGPVENLAKHLSDPFGNN 268
>gi|194697528|gb|ACF82848.1| unknown [Zea mays]
Length = 283
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 66/86 (76%), Gaps = 2/86 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSMF F
Sbjct: 185 VGGAEYYRITNGL--DLEDKLHPGGPFDPLGLASDPDQAAILKVKEIKNGRLAMFSMFAF 242
Query: 61 FVQAIVTGKGPLENLADHLADPVNNN 86
F+QA VTG+GP+ENLA HL+DP NN
Sbjct: 243 FIQAYVTGEGPVENLAKHLSDPFGNN 268
>gi|338746088|emb|CCC15093.1| putative chloroplast light-harvesting complex II protein precursor
[Lepidodinium chlorophorum]
Length = 215
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/74 (68%), Positives = 60/74 (81%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG EGYR+AGGPLGEV D LYPG SFDPLG ++DPE+ EL+ KEIKNGRLAM +M G
Sbjct: 140 MGLSEGYRLAGGPLGEVGDALYPGASFDPLGFSEDPESLLELQTKEIKNGRLAMLAMLGM 199
Query: 61 FVQAIVTGKGPLEN 74
+ QA+VTGKGP+ N
Sbjct: 200 YTQALVTGKGPVSN 213
>gi|162461210|ref|NP_001105698.1| light harvesting chlorophyll a/b binding protein5 precursor [Zea
mays]
gi|733454|gb|AAA64414.1| chlorophyll a/b-binding apoprotein CP26 precursor [Zea mays]
gi|414591311|tpg|DAA41882.1| TPA: chlorophyll a/b-binding apoprotein CP26 Precursor [Zea mays]
Length = 283
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 66/86 (76%), Gaps = 2/86 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSMF F
Sbjct: 185 VGGAEYYRIINGL--DLEDKLHPGGPFDPLGLASDPDQAAILKVKEIKNGRLAMFSMFAF 242
Query: 61 FVQAIVTGKGPLENLADHLADPVNNN 86
F+QA VTG+GP+ENLA HL+DP NN
Sbjct: 243 FIQAYVTGEGPVENLAKHLSDPFGNN 268
>gi|302849997|ref|XP_002956527.1| hypothetical protein VOLCADRAFT_107271 [Volvox carteri f.
nagariensis]
gi|300258225|gb|EFJ42464.1| hypothetical protein VOLCADRAFT_107271 [Volvox carteri f.
nagariensis]
Length = 238
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 56/63 (88%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 157 MGLVEGYRVNGGPAGEGLDPLYPGKSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 216
Query: 61 FVQ 63
FVQ
Sbjct: 217 FVQ 219
>gi|223949713|gb|ACN28940.1| unknown [Zea mays]
Length = 159
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 66/86 (76%), Gaps = 2/86 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSMF F
Sbjct: 61 VGGAEYYRIINGL--DLEDKLHPGGPFDPLGLASDPDQAAILKVKEIKNGRLAMFSMFAF 118
Query: 61 FVQAIVTGKGPLENLADHLADPVNNN 86
F+QA VTG+GP+ENLA HL+DP NN
Sbjct: 119 FIQAYVTGEGPVENLAKHLSDPFGNN 144
>gi|116785086|gb|ABK23587.1| unknown [Picea sitchensis]
Length = 303
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+G E YR G + D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMFSM GF
Sbjct: 205 VGGAEYYRATNGL--DFEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSMLGF 262
Query: 61 FVQAIVTGKGPLENLADHLADPVNNN 86
FVQA VTG+GP+ENLA HL+DP NN
Sbjct: 263 FVQAYVTGEGPVENLAAHLSDPFGNN 288
>gi|87313233|gb|ABD37912.1| light-harvesting chlorophyll-a/b binding protein LhcbM5
[Chlamydomonas incerta]
Length = 232
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/68 (82%), Positives = 61/68 (89%), Gaps = 1/68 (1%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MGA+EGYR+ GGP GE D L+PGG F DPLGLA+DP+AFAELKVKEIKNGRLAMFSMFG
Sbjct: 165 MGAIEGYRVNGGPAGEGLDKLHPGGQFFDPLGLAEDPDAFAELKVKEIKNGRLAMFSMFG 224
Query: 60 FFVQAIVT 67
FFVQAIVT
Sbjct: 225 FFVQAIVT 232
>gi|116779208|gb|ABK21181.1| unknown [Picea sitchensis]
gi|116780325|gb|ABK21632.1| unknown [Picea sitchensis]
gi|116781512|gb|ABK22131.1| unknown [Picea sitchensis]
gi|116791342|gb|ABK25943.1| unknown [Picea sitchensis]
gi|116791754|gb|ABK26096.1| unknown [Picea sitchensis]
gi|148907198|gb|ABR16740.1| unknown [Picea sitchensis]
gi|224284432|gb|ACN39950.1| unknown [Picea sitchensis]
gi|224284582|gb|ACN40024.1| unknown [Picea sitchensis]
gi|224284686|gb|ACN40075.1| unknown [Picea sitchensis]
Length = 303
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+G E YR G + D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMFSM GF
Sbjct: 205 VGGAEYYRATNGL--DFEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSMLGF 262
Query: 61 FVQAIVTGKGPLENLADHLADPVNNN 86
FVQA VTG+GP+ENLA HL+DP NN
Sbjct: 263 FVQAYVTGEGPVENLAAHLSDPFGNN 288
>gi|224285421|gb|ACN40433.1| unknown [Picea sitchensis]
Length = 303
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+G E YR G + D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMFSM GF
Sbjct: 205 VGGAEYYRATNGL--DFEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSMLGF 262
Query: 61 FVQAIVTGKGPLENLADHLADPVNNN 86
FVQA VTG+GP+ENLA HL+DP NN
Sbjct: 263 FVQAYVTGEGPVENLAAHLSDPFGNN 288
>gi|116783956|gb|ABK23158.1| unknown [Picea sitchensis]
Length = 303
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+G E YR G + D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMFSM GF
Sbjct: 205 VGGAEYYRATNGL--DFEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSMLGF 262
Query: 61 FVQAIVTGKGPLENLADHLADPVNNN 86
FVQA VTG+GP+ENLA HL+DP NN
Sbjct: 263 FVQAYVTGEGPVENLAAHLSDPFGNN 288
>gi|169743370|gb|ACA66263.1| chloroplast chlorophyll a/b binding protein precursor
[Phyllostachys edulis]
Length = 261
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 66/86 (76%), Gaps = 2/86 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GF
Sbjct: 163 VGGAEYYRIINGL--DLEDKLHPGGPFDPLGLASDPDQAALLKVKEIKNGRLAMFSMLGF 220
Query: 61 FVQAIVTGKGPLENLADHLADPVNNN 86
F+QA VTG+GP+ENLA HL+DP NN
Sbjct: 221 FIQAYVTGEGPVENLAKHLSDPFGNN 246
>gi|224285677|gb|ACN40554.1| unknown [Picea sitchensis]
Length = 278
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+G E YR G + D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMFSM GF
Sbjct: 180 VGGAEYYRATNGL--DFEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSMLGF 237
Query: 61 FVQAIVTGKGPLENLADHLADPVNNN 86
FVQA VTG+GP+ENLA HL+DP NN
Sbjct: 238 FVQAYVTGEGPVENLAAHLSDPFGNN 263
>gi|160713963|gb|ABX47017.1| chloroplast chlorophyll a/b binding protein cab-PhE9 [Phyllostachys
edulis]
Length = 283
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
Query: 2 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF
Sbjct: 186 GGAEYYRIINGL--DLEDKLHPGGPFDPLGLASDPDQAALLKVKEIKNGRLAMFSMLGFF 243
Query: 62 VQAIVTGKGPLENLADHLADPVNNN 86
+QA VTG+GP+ENLA HL+DP NN
Sbjct: 244 IQAYVTGEGPVENLAKHLSDPFGNN 268
>gi|62733870|gb|AAX95979.1| chlorophyll a/b-binding protein CP26 precursor - maize [Oryza
sativa Japonica Group]
gi|77549543|gb|ABA92340.1| Chlorophyll A-B binding protein, expressed [Oryza sativa Japonica
Group]
Length = 225
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 66/86 (76%), Gaps = 2/86 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GF
Sbjct: 127 VGGAEYYRIINGL--DLEDKLHPGGPFDPLGLASDPDQAALLKVKEIKNGRLAMFSMLGF 184
Query: 61 FVQAIVTGKGPLENLADHLADPVNNN 86
F+QA VTG+GP+ENL+ HL+DP NN
Sbjct: 185 FIQAYVTGEGPVENLSKHLSDPFGNN 210
>gi|261351266|gb|ACX71300.1| chloroplast pigment-binding protein CP26 [Capsicum annuum]
Length = 287
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 66/86 (76%), Gaps = 2/86 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GF
Sbjct: 189 VGGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQAAILKVKEIKNGRLAMFSMLGF 246
Query: 61 FVQAIVTGKGPLENLADHLADPVNNN 86
F+QA VTG+GP+ENLA HL+DP NN
Sbjct: 247 FIQAYVTGQGPVENLAAHLSDPFGNN 272
>gi|110377793|gb|ABG73417.1| chloroplast pigment-binding protein CP26 [Nicotiana tabacum]
Length = 285
Score = 110 bits (276), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
Query: 2 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMF+M GFF
Sbjct: 188 GGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQAAILKVKEIKNGRLAMFAMLGFF 245
Query: 62 VQAIVTGKGPLENLADHLADPVNNN 86
+QA VTGKGP+ENLA HL+DP NN
Sbjct: 246 IQAYVTGKGPVENLAAHLSDPFGNN 270
>gi|145078729|tpg|DAA05882.1| TPA_inf: chloroplast light-harvesting complex II protein
precursor Lhcbm3 [Euglena gracilis]
Length = 244
Score = 110 bits (276), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 60/80 (75%)
Query: 11 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 70
GGPLG TD +YPG +FDPLGL+ D AFAELKVKE+KNGRLAM M G F+Q TGKG
Sbjct: 1 GGPLGPATDLVYPGKAFDPLGLSKDETAFAELKVKEVKNGRLAMLGMLGLFMQGFATGKG 60
Query: 71 PLENLADHLADPVNNNAWAY 90
PL+NLADHLADP N +
Sbjct: 61 PLQNLADHLADPTGANIITF 80
>gi|125533937|gb|EAY80485.1| hypothetical protein OsI_35663 [Oryza sativa Indica Group]
Length = 283
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
Query: 2 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF
Sbjct: 186 GGAEYYRIINGL--DLEDKLHPGGPFDPLGLASDPDQAALLKVKEIKNGRLAMFSMLGFF 243
Query: 62 VQAIVTGKGPLENLADHLADPVNNN 86
+QA VTG+GP+ENL+ HL+DP NN
Sbjct: 244 IQAYVTGEGPVENLSKHLSDPFGNN 268
>gi|115484899|ref|NP_001067593.1| Os11g0242800 [Oryza sativa Japonica Group]
gi|62733869|gb|AAX95978.1| chlorophyll a/b-binding protein CP26 precursor - maize [Oryza
sativa Japonica Group]
gi|108864184|gb|ABA92338.2| Chlorophyll A-B binding protein, expressed [Oryza sativa Japonica
Group]
gi|113644815|dbj|BAF27956.1| Os11g0242800 [Oryza sativa Japonica Group]
gi|125576735|gb|EAZ17957.1| hypothetical protein OsJ_33501 [Oryza sativa Japonica Group]
gi|215692422|dbj|BAG87842.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704351|dbj|BAG93785.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 283
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
Query: 2 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF
Sbjct: 186 GGAEYYRIINGL--DLEDKLHPGGPFDPLGLASDPDQAALLKVKEIKNGRLAMFSMLGFF 243
Query: 62 VQAIVTGKGPLENLADHLADPVNNN 86
+QA VTG+GP+ENL+ HL+DP NN
Sbjct: 244 IQAYVTGEGPVENLSKHLSDPFGNN 268
>gi|297809249|ref|XP_002872508.1| hypothetical protein ARALYDRAFT_489877 [Arabidopsis lyrata subsp.
lyrata]
gi|297318345|gb|EFH48767.1| hypothetical protein ARALYDRAFT_489877 [Arabidopsis lyrata subsp.
lyrata]
Length = 280
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 64/85 (75%), Gaps = 2/85 (2%)
Query: 2 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
G E YRI G + D L+PGG FDPLGLA DPE A LKVKEIKNGRLAMF+M GFF
Sbjct: 183 GGAEYYRITNGL--DFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFF 240
Query: 62 VQAIVTGKGPLENLADHLADPVNNN 86
+QA VTG+GP+ENLA HL+DP NN
Sbjct: 241 IQAYVTGEGPVENLAKHLSDPFGNN 265
>gi|15235029|ref|NP_192772.1| chlorophyll a-b binding protein CP26 [Arabidopsis thaliana]
gi|28558077|sp|Q9XF89.1|CB5_ARATH RecName: Full=Chlorophyll a-b binding protein CP26, chloroplastic;
AltName: Full=LHCB5; AltName: Full=LHCIIc; AltName:
Full=Light-harvesting complex II protein 5; Flags:
Precursor
gi|4741958|gb|AAD28776.1|AF134129_1 Lhcb5 protein [Arabidopsis thaliana]
gi|11908106|gb|AAG41482.1|AF326900_1 putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|12642916|gb|AAK00400.1|AF339718_1 putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|14190463|gb|AAK55712.1|AF380631_1 AT4g10340/F24G24_140 [Arabidopsis thaliana]
gi|15983446|gb|AAL11591.1|AF424597_1 AT4g10340/F24G24_140 [Arabidopsis thaliana]
gi|4538963|emb|CAB39787.1| chlorophyll a/b-binding protein-like [Arabidopsis thaliana]
gi|7267731|emb|CAB78157.1| chlorophyll a/b-binding protein-like [Arabidopsis thaliana]
gi|15809718|gb|AAL06787.1| AT4g10340/F24G24_140 [Arabidopsis thaliana]
gi|332657469|gb|AEE82869.1| chlorophyll a-b binding protein CP26 [Arabidopsis thaliana]
Length = 280
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 64/85 (75%), Gaps = 2/85 (2%)
Query: 2 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
G E YRI G + D L+PGG FDPLGLA DPE A LKVKEIKNGRLAMF+M GFF
Sbjct: 183 GGAEYYRITNGL--DFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFF 240
Query: 62 VQAIVTGKGPLENLADHLADPVNNN 86
+QA VTG+GP+ENLA HL+DP NN
Sbjct: 241 IQAYVTGEGPVENLAKHLSDPFGNN 265
>gi|215740823|dbj|BAG96979.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 159
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
Query: 2 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF
Sbjct: 62 GGAEYYRIINGL--DLEDKLHPGGPFDPLGLASDPDQAALLKVKEIKNGRLAMFSMLGFF 119
Query: 62 VQAIVTGKGPLENLADHLADPVNNN 86
+QA VTG+GP+ENL+ HL+DP NN
Sbjct: 120 IQAYVTGEGPVENLSKHLSDPFGNN 144
>gi|225459918|ref|XP_002264295.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic
[Vitis vinifera]
gi|147770824|emb|CAN76428.1| hypothetical protein VITISV_023565 [Vitis vinifera]
gi|297734735|emb|CBI16969.3| unnamed protein product [Vitis vinifera]
Length = 290
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 67/86 (77%), Gaps = 2/86 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+G E YRI G ++ D L+PGG FDPLGLA+DP+ A LKVKEIKNGRLAMF+M GF
Sbjct: 192 VGGAEYYRIINGL--DLEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAMLGF 249
Query: 61 FVQAIVTGKGPLENLADHLADPVNNN 86
F+QA VTG+GP+ENLA HL+DP NN
Sbjct: 250 FIQAYVTGEGPVENLAAHLSDPFGNN 275
>gi|242070573|ref|XP_002450563.1| hypothetical protein SORBIDRAFT_05g007070 [Sorghum bicolor]
gi|241936406|gb|EES09551.1| hypothetical protein SORBIDRAFT_05g007070 [Sorghum bicolor]
Length = 282
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM F
Sbjct: 184 VGGAEYYRIINGL--DLEDKLHPGGPFDPLGLASDPDQAAILKVKEIKNGRLAMFSMLAF 241
Query: 61 FVQAIVTGKGPLENLADHLADPVNNN 86
F+QA VTG+GP+ENLA HL+DP NN
Sbjct: 242 FIQAYVTGEGPVENLAKHLSDPFGNN 267
>gi|21593520|gb|AAM65487.1| chlorophyll a/b-binding protein-like [Arabidopsis thaliana]
Length = 280
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 64/85 (75%), Gaps = 2/85 (2%)
Query: 2 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
G E YRI G + D L+PGG FDPLGLA DPE A LKVKEIKNGRLAMF+M GFF
Sbjct: 183 GGSEYYRITNGL--DFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFF 240
Query: 62 VQAIVTGKGPLENLADHLADPVNNN 86
+QA VTG+GP+ENLA HL+DP NN
Sbjct: 241 IQAYVTGEGPVENLAKHLSDPFGNN 265
>gi|149391069|gb|ABR25552.1| chloroplast chlorophyll a-b binding proteinr [Oryza sativa Indica
Group]
Length = 201
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
Query: 2 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF
Sbjct: 104 GGAEYYRIINGL--DLEDKLHPGGPFDPLGLASDPDQAALLKVKEIKNGRLAMFSMLGFF 161
Query: 62 VQAIVTGKGPLENLADHLADPVNNN 86
+QA VTG+GP+ENL+ HL+DP NN
Sbjct: 162 IQAYVTGEGPVENLSKHLSDPFGNN 186
>gi|168068372|ref|XP_001786046.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662227|gb|EDQ49143.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 270
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/68 (77%), Positives = 59/68 (86%)
Query: 19 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 78
D L+PGG+FDPLGLA DP+ FA LKVKEIKNGRLAMFSM GFFVQA VTG+GP+ENLA H
Sbjct: 188 DRLHPGGAFDPLGLAKDPDQFALLKVKEIKNGRLAMFSMLGFFVQAYVTGEGPVENLAAH 247
Query: 79 LADPVNNN 86
L+DP NN
Sbjct: 248 LSDPFGNN 255
>gi|108864186|gb|ABG22426.1| Chlorophyll A-B binding protein, expressed [Oryza sativa Japonica
Group]
Length = 222
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
Query: 2 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF
Sbjct: 125 GGAEYYRIINGL--DLEDKLHPGGPFDPLGLASDPDQAALLKVKEIKNGRLAMFSMLGFF 182
Query: 62 VQAIVTGKGPLENLADHLADPVNNN 86
+QA VTG+GP+ENL+ HL+DP NN
Sbjct: 183 IQAYVTGEGPVENLSKHLSDPFGNN 207
>gi|1644289|emb|CAA65042.1| chlorophyll a/b-binding protein CP26 in PS II [Brassica juncea]
Length = 283
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 64/86 (74%), Gaps = 2/86 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+G E YRI G + D L+PGG FDPL LA DPE A LKVKEIKNGRLAMFSMF F
Sbjct: 185 LGGAEYYRITNGL--DFEDKLHPGGPFDPLDLAKDPEQGALLKVKEIKNGRLAMFSMFAF 242
Query: 61 FVQAIVTGKGPLENLADHLADPVNNN 86
F+QA VTG+GP+ENL+ HL+DP NN
Sbjct: 243 FIQAYVTGEGPVENLSKHLSDPFGNN 268
>gi|22750|emb|CAA78900.1| Lhcb5 protein [Pinus sylvestris]
gi|1093837|prf||2104448A Lhcb5 gene
Length = 302
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 63/85 (74%), Gaps = 2/85 (2%)
Query: 2 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
G E YR G D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMFSM GFF
Sbjct: 205 GGAEYYRATNGL--NFDDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSMLGFF 262
Query: 62 VQAIVTGKGPLENLADHLADPVNNN 86
+QA VTG+GP+ENLA HL+DP NN
Sbjct: 263 LQAYVTGEGPVENLAAHLSDPFGNN 287
>gi|302144191|emb|CBI23318.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/98 (62%), Positives = 62/98 (63%), Gaps = 27/98 (27%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYRI G P LKVKEIKNGRLAMFSMFGF
Sbjct: 171 MGLVEGYRINGLP---------------------------GLKVKEIKNGRLAMFSMFGF 203
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENL DHL +PV NNAWAYAT FVPG
Sbjct: 204 FVQAIVTGKGPLENLLDHLDNPVANNAWAYATKFVPGS 241
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
Query: 12 GPLGEVTDPLYPGGSF------DPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
GP T P Y G F D GL+ DPEAFA + E+ +GR AM FG
Sbjct: 61 GPFSAQT-PSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGAFG 113
>gi|19184|emb|CAA43590.1| Type I (26 kD) CP29 polypeptide [Solanum lycopersicum]
Length = 286
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
Query: 5 EGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 64
E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF+QA
Sbjct: 192 EYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQAAILKVKEIKNGRLAMFSMLGFFIQA 249
Query: 65 IVTGKGPLENLADHLADPVNNN 86
VTG+GP+ENLA HL+DP NN
Sbjct: 250 YVTGQGPVENLAAHLSDPFGNN 271
>gi|302144193|emb|CBI23320.3| unnamed protein product [Vitis vinifera]
Length = 236
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/98 (62%), Positives = 62/98 (63%), Gaps = 27/98 (27%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYRI G P LKVKEIKNGRLAMFSMFGF
Sbjct: 166 MGLVEGYRINGLP---------------------------GLKVKEIKNGRLAMFSMFGF 198
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENL DHL +PV NNAWAYAT FVPG
Sbjct: 199 FVQAIVTGKGPLENLLDHLDNPVANNAWAYATKFVPGS 236
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
Query: 12 GPLGEVTDPLYPGGSF------DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 65
GP T P Y G F D GL+ DPEAFA + E+ +GR AM FG +
Sbjct: 56 GPFSAQT-PSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGAFGCITPEV 114
Query: 66 V 66
+
Sbjct: 115 L 115
>gi|18958|emb|CAA44777.1| Precursor of CP29, core chlorophyll a/b binding (CAB) protein of
photosystem II (PSII) [Hordeum vulgare subsp. vulgare]
gi|326511355|dbj|BAJ87691.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|445122|prf||1908428A chlorophyll a/b-binding protein
Length = 286
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 61/82 (74%), Gaps = 2/82 (2%)
Query: 5 EGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 64
E YRI G E D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF+QA
Sbjct: 192 EYYRITNGL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSMLGFFIQA 249
Query: 65 IVTGKGPLENLADHLADPVNNN 86
VTG+GP ENL HL+DP NN
Sbjct: 250 YVTGEGPFENLCAHLSDPFGNN 271
>gi|255557841|ref|XP_002519950.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223540996|gb|EEF42554.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 292
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMF+M GF
Sbjct: 194 LGGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQAAILKVKEIKNGRLAMFAMLGF 251
Query: 61 FVQAIVTGKGPLENLADHLADPVNNN 86
+ QA VTG+GP+ENLA HL+DP NN
Sbjct: 252 YFQAYVTGEGPVENLAKHLSDPFGNN 277
>gi|357157014|ref|XP_003577654.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
[Brachypodium distachyon]
Length = 286
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
Query: 5 EGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 64
E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMFSM GFF+QA
Sbjct: 192 EYYRIINGL--DLEDKLHPGGPFDPLGLASDPDQAALLKVKEIKNGRLAMFSMLGFFIQA 249
Query: 65 IVTGKGPLENLADHLADPVNNN 86
VTG+GP+ENL+ HL+DP NN
Sbjct: 250 YVTGEGPVENLSAHLSDPFGNN 271
>gi|449447521|ref|XP_004141516.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
[Cucumis sativus]
gi|449510691|ref|XP_004163735.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
[Cucumis sativus]
Length = 288
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 64/86 (74%), Gaps = 2/86 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+G E YRI G D L+PGG FDPLGLADDP+ A LKVKEIKNGRLAMF+M GF
Sbjct: 190 VGGAEYYRIINGL--NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGF 247
Query: 61 FVQAIVTGKGPLENLADHLADPVNNN 86
+ QA VTG+GP+ENLA HL+DP NN
Sbjct: 248 YFQAYVTGEGPVENLAKHLSDPFGNN 273
>gi|356576567|ref|XP_003556402.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
[Glycine max]
Length = 288
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMF+M GF
Sbjct: 190 VGGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAMLGF 247
Query: 61 FVQAIVTGKGPLENLADHLADPVNNN 86
+ QA VTG+GP+ENLA HL+DP NN
Sbjct: 248 YFQAYVTGEGPVENLAKHLSDPFGNN 273
>gi|255638437|gb|ACU19528.1| unknown [Glycine max]
Length = 287
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMF+M GF
Sbjct: 189 VGGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAMLGF 246
Query: 61 FVQAIVTGKGPLENLADHLADPVNNN 86
+ QA VTG+GP+ENLA HL+DP NN
Sbjct: 247 YFQAYVTGEGPVENLAKHLSDPFGNN 272
>gi|356535308|ref|XP_003536189.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
[Glycine max]
Length = 287
Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMF+M GF
Sbjct: 189 VGGAEYYRIINGL--DLEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAMLGF 246
Query: 61 FVQAIVTGKGPLENLADHLADPVNNN 86
+ QA VTG+GP+ENLA HL+DP NN
Sbjct: 247 YFQAYVTGEGPVENLAKHLSDPFGNN 272
>gi|1262851|gb|AAB19042.1| type 2 light-harvesting chlorophyll a/b-binding polypeptide,
partial [Pinus palustris]
Length = 55
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 51/55 (92%), Positives = 52/55 (94%)
Query: 44 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
VKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DHLADP NNAWAYATNFVPGK
Sbjct: 1 VKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPAANNAWAYATNFVPGK 55
>gi|339716054|gb|AEJ88274.1| putative chlorophyll a/b binding protein [Wolffia australiana]
Length = 279
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+G E YRI G ++ D L+PGG FDPLGLA DP+ A LK KEIKNGRLAMF+M GF
Sbjct: 181 LGGAEYYRIINGL--DLEDKLHPGGPFDPLGLASDPDQAAILKAKEIKNGRLAMFAMLGF 238
Query: 61 FVQAIVTGKGPLENLADHLADPVNNN 86
F+QA VTG+GP+ENL+ HL+DP NN
Sbjct: 239 FLQAYVTGEGPVENLSKHLSDPFGNN 264
>gi|159147189|gb|ABW90989.1| LHCB5 [Phyllostachys edulis]
Length = 283
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 63/85 (74%), Gaps = 2/85 (2%)
Query: 2 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
G E YRI G ++ L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMF M GFF
Sbjct: 186 GGAEYYRIINGL--DLEGKLHPGGPFDPLGLASDPDQAAPLKVKEIKNGRLAMFPMLGFF 243
Query: 62 VQAIVTGKGPLENLADHLADPVNNN 86
+QA VTG+GP+ENLA HL+DP NN
Sbjct: 244 IQAYVTGEGPVENLAKHLSDPFGNN 268
>gi|356530963|ref|XP_003534048.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
[Glycine max]
Length = 291
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 2/86 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+G E YRI G D L+PGG FDPLGLA+DP+ A LKVKEIKNGRLAMF+M GF
Sbjct: 193 VGGAEYYRIINGL--NFEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAMLGF 250
Query: 61 FVQAIVTGKGPLENLADHLADPVNNN 86
+ QA VTG+GP+ENLA HL+DP NN
Sbjct: 251 YFQAYVTGEGPVENLAKHLSDPFGNN 276
>gi|255645788|gb|ACU23386.1| unknown [Glycine max]
Length = 289
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 2/86 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+G E YRI G D L+PGG FDPLGLA+DP+ A LKVKEIKNGRLAMF+M GF
Sbjct: 191 VGGAEYYRIINGL--NFEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAMLGF 248
Query: 61 FVQAIVTGKGPLENLADHLADPVNNN 86
+ QA VTG+GP+ENLA HL+DP NN
Sbjct: 249 YFQAYVTGEGPVENLAKHLSDPFGNN 274
>gi|356559931|ref|XP_003548249.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
[Glycine max]
Length = 289
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 2/86 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+G E YRI G D L+PGG FDPLGLA+DP+ A LKVKEIKNGRLAMF+M GF
Sbjct: 191 VGGAEYYRIINGL--NFEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAMLGF 248
Query: 61 FVQAIVTGKGPLENLADHLADPVNNN 86
+ QA VTG+GP+ENLA HL+DP NN
Sbjct: 249 YFQAYVTGEGPVENLAKHLSDPFGNN 274
>gi|224127848|ref|XP_002329192.1| light-harvesting complex II protein Lhcb5 [Populus trichocarpa]
gi|118487642|gb|ABK95646.1| unknown [Populus trichocarpa]
gi|222870973|gb|EEF08104.1| light-harvesting complex II protein Lhcb5 [Populus trichocarpa]
Length = 290
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+G E +RI G LG D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMF+M GF
Sbjct: 192 VGGAEYFRITNG-LG-FDDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAMLGF 249
Query: 61 FVQAIVTGKGPLENLADHLADPVNNN 86
F QA VTG+GP+ENLA HL+DP NN
Sbjct: 250 FFQAYVTGEGPVENLAKHLSDPFGNN 275
>gi|307106802|gb|EFN55047.1| hypothetical protein CHLNCDRAFT_35818 [Chlorella variabilis]
Length = 285
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 63/100 (63%), Gaps = 14/100 (14%)
Query: 1 MGAVEGYRIAG-GPLG-------------EVTDPLYPGGSFDPLGLADDPEAFAELKVKE 46
MGA E YR G GP G + D LYPGG FDPLGLADDPE AELKVKE
Sbjct: 172 MGAAENYRRTGEGPAGYSPGVGKFDESAYDSMDSLYPGGPFDPLGLADDPEVLAELKVKE 231
Query: 47 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 86
IKNGRLAM S GF VQA VTG+GP N + H+ADP N
Sbjct: 232 IKNGRLAMVSFLGFAVQAAVTGEGPYANWSKHVADPFGYN 271
>gi|302796621|ref|XP_002980072.1| light-harvesting complex [Selaginella moellendorffii]
gi|302811558|ref|XP_002987468.1| light-harvesting complex [Selaginella moellendorffii]
gi|300144874|gb|EFJ11555.1| light-harvesting complex [Selaginella moellendorffii]
gi|300152299|gb|EFJ18942.1| light-harvesting complex [Selaginella moellendorffii]
Length = 271
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 56/68 (82%)
Query: 19 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 78
D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M GFF+QA TG+GP+ENL H
Sbjct: 193 DRLHPGGPFDPLGLAKDPDNFALLKVKEIKNGRLAMFAMLGFFIQAYATGEGPVENLTTH 252
Query: 79 LADPVNNN 86
L+DP NN
Sbjct: 253 LSDPFGNN 260
>gi|384253873|gb|EIE27347.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
Length = 330
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 66/100 (66%), Gaps = 14/100 (14%)
Query: 1 MGAVEGYRIAG-GPLGEV-------------TDPLYPGGSFDPLGLADDPEAFAELKVKE 46
+GAVE YR +G GP G D LYPGG FDPLGLADDPE FAELKVKE
Sbjct: 217 LGAVERYRQSGEGPPGYSPGVGKFDSSIFSGLDNLYPGGPFDPLGLADDPETFAELKVKE 276
Query: 47 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 86
IKNGRLA+ S+ GF VQ+ VTG+GP N + H+ADP N
Sbjct: 277 IKNGRLALISVLGFAVQSYVTGEGPYANWSKHVADPFGYN 316
>gi|159475641|ref|XP_001695927.1| minor chlorophyll a-b binding protein of photosystem II
[Chlamydomonas reinhardtii]
gi|12060444|dbj|BAB20613.1| CP26 [Chlamydomonas reinhardtii]
gi|158275487|gb|EDP01264.1| minor chlorophyll a-b binding protein of photosystem II
[Chlamydomonas reinhardtii]
Length = 289
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 64/100 (64%), Gaps = 14/100 (14%)
Query: 1 MGAVEGYRIAG-GPLG-------------EVTDPLYPGGSFDPLGLADDPEAFAELKVKE 46
MGAVE YR G GP G + DPLYPGG FDPLGLADDPE ELKVKE
Sbjct: 176 MGAVEFYRRNGTGPAGYSPGIGKFDSSVFDGLDPLYPGGPFDPLGLADDPEVLQELKVKE 235
Query: 47 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 86
IKNGRLAM S+ GF VQ+ VTG+GP N H+ADP N
Sbjct: 236 IKNGRLAMVSVLGFAVQSYVTGEGPYANWTKHVADPFGYN 275
>gi|87313203|gb|ABD37898.1| light-harvesting chlorophyll-a/b binding protein LhcbM1
[Acutodesmus obliquus]
Length = 223
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/63 (82%), Positives = 54/63 (85%), Gaps = 1/63 (1%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MG VEGYR+ GGP GE D LYPGG F DPLGLADDP+ FAELKVKEIKNGRLAMFSMFG
Sbjct: 161 MGTVEGYRVNGGPAGEGLDKLYPGGDFFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFG 220
Query: 60 FFV 62
FFV
Sbjct: 221 FFV 223
>gi|87313239|gb|ABD37916.1| light-harvesting chlorophyll-a/b binding protein Lhcb5
[Chlamydomonas incerta]
Length = 259
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 64/100 (64%), Gaps = 14/100 (14%)
Query: 1 MGAVEGYRIAG-GPLG-------------EVTDPLYPGGSFDPLGLADDPEAFAELKVKE 46
MGAVE YR G GP G + DPLYPGG FDPLGLADDPE ELKVKE
Sbjct: 146 MGAVEFYRRNGSGPAGYSPGIGKFDSSVFDGLDPLYPGGPFDPLGLADDPEVLQELKVKE 205
Query: 47 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 86
IKNGRLAM S+ GF VQ+ VTG+GP N H+ADP N
Sbjct: 206 IKNGRLAMVSVLGFAVQSYVTGEGPYANWTKHVADPFGYN 245
>gi|154357560|gb|ABS78804.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
Length = 149
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 60/79 (75%), Gaps = 2/79 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+G E YRI G + D L+PGG FDPLGLA DPE A LKVKEIKNGRLAMF+M GF
Sbjct: 73 LGGAEYYRITNGL--DFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGF 130
Query: 61 FVQAIVTGKGPLENLADHL 79
F+QA VTG+GP+ENLA HL
Sbjct: 131 FIQAYVTGEGPVENLAKHL 149
>gi|12240089|gb|AAG49561.1| light-harvesting chlorophyll-binding protein [Citrus reticulata]
Length = 156
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 53/59 (89%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MG VEGYRI GGPLGE DPLYPGG+FDPLGLAD P+ FAELKVKE+KNGRLAMFSMFG
Sbjct: 98 MGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADGPDQFAELKVKELKNGRLAMFSMFG 156
>gi|32307466|gb|AAP79138.1| chlorophyll a/b-binding protein II 2 [Bigelowiella natans]
Length = 346
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG E YR +G P GE D ++PGG F+PL D AELKVKEIKNGRLAMFSM
Sbjct: 246 MGGAEAYRASGVAPNGEEFDKMHPGGYYFNPLKFGKDEADLAELKVKEIKNGRLAMFSML 305
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNNAWAY 90
GF++QA TG GPL+NL DH AD N N + Y
Sbjct: 306 GFYIQAATTGNGPLQNLVDHRADAANENIFKY 337
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 22 YPGG-SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 66
YPG +D LGL+ DPE FA + E+ + R AM G I+
Sbjct: 150 YPGDYGWDALGLSSDPETFANYREAELLHARWAMLGALGCIFPEIL 195
>gi|242054229|ref|XP_002456260.1| hypothetical protein SORBIDRAFT_03g033110 [Sorghum bicolor]
gi|241928235|gb|EES01380.1| hypothetical protein SORBIDRAFT_03g033110 [Sorghum bicolor]
Length = 121
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 6 GYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLA---MFSMFGFFV 62
G+ + +GEV DPLYPGGSFDPLGLADDPE AELKVKEIKNGRL F G
Sbjct: 26 GWPVRWAAVGEVVDPLYPGGSFDPLGLADDPEKLAELKVKEIKNGRLGGSPCFPCSGSLS 85
Query: 63 QAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
+G L PV+NNAWAYATNFVPG
Sbjct: 86 GLSSPARGHLRTWPTISLTPVSNNAWAYATNFVPG 120
>gi|28630973|gb|AAO45885.1| chlorophyll a/b-binding protein precursor [Citrus limon]
Length = 216
Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/50 (98%), Positives = 50/50 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNG 50
MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDP+AFAELKVKEIKNG
Sbjct: 167 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPKAFAELKVKEIKNG 216
>gi|154357502|gb|ABS78775.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357504|gb|ABS78776.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357506|gb|ABS78777.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357508|gb|ABS78778.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357510|gb|ABS78779.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357512|gb|ABS78780.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357514|gb|ABS78781.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357516|gb|ABS78782.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357518|gb|ABS78783.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357520|gb|ABS78784.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357522|gb|ABS78785.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357524|gb|ABS78786.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357526|gb|ABS78787.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357528|gb|ABS78788.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357530|gb|ABS78789.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357532|gb|ABS78790.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357534|gb|ABS78791.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357536|gb|ABS78792.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357538|gb|ABS78793.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357540|gb|ABS78794.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357542|gb|ABS78795.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357544|gb|ABS78796.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357546|gb|ABS78797.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357548|gb|ABS78798.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357550|gb|ABS78799.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357552|gb|ABS78800.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357554|gb|ABS78801.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357556|gb|ABS78802.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357558|gb|ABS78803.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357562|gb|ABS78805.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357566|gb|ABS78807.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357568|gb|ABS78808.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357572|gb|ABS78810.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357574|gb|ABS78811.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
Length = 149
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/78 (67%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
Query: 2 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
G E YRI G + D L+PGG FDPLGLA DPE A LKVKEIKNGRLAMF+M GFF
Sbjct: 74 GGAEYYRITNGL--DFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFF 131
Query: 62 VQAIVTGKGPLENLADHL 79
+QA VTG+GP+ENLA HL
Sbjct: 132 IQAYVTGEGPVENLAKHL 149
>gi|302808391|ref|XP_002985890.1| light-harvesting complex [Selaginella moellendorffii]
gi|300146397|gb|EFJ13067.1| light-harvesting complex [Selaginella moellendorffii]
Length = 320
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 22 YPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
YPGG FDPLGL+ DP F ELKVKEIKNGRLAM + GF+VQA+VT KGPLENL DHL
Sbjct: 248 YPGGVLFDPLGLSKDPATFEELKVKEIKNGRLAMVAWLGFYVQALVTKKGPLENLLDHLQ 307
Query: 81 DPVNNNA 87
DP++NNA
Sbjct: 308 DPLHNNA 314
>gi|302789319|ref|XP_002976428.1| light-harvesting complex [Selaginella moellendorffii]
gi|300156058|gb|EFJ22688.1| light-harvesting complex [Selaginella moellendorffii]
Length = 320
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 22 YPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
YPGG FDPLGL+ DP F ELKVKEIKNGRLAM + GF+VQA+VT KGPLENL DHL
Sbjct: 248 YPGGVLFDPLGLSKDPATFEELKVKEIKNGRLAMVAWLGFYVQALVTKKGPLENLLDHLQ 307
Query: 81 DPVNNNA 87
DP++NNA
Sbjct: 308 DPLHNNA 314
>gi|154357570|gb|ABS78809.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
Length = 149
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/78 (67%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Query: 2 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
G E YRI G + D L+PGG FDPLGLA DPE A LKVKEIKNGRLAMF M GFF
Sbjct: 74 GGAEYYRITNGL--DFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFXMLGFF 131
Query: 62 VQAIVTGKGPLENLADHL 79
+QA VTG+GP+ENLA HL
Sbjct: 132 IQAYVTGEGPVENLAKHL 149
>gi|154357564|gb|ABS78806.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
Length = 149
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/78 (67%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Query: 2 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
G E YRI G + D L+PGG FDPLGLA DPE A LKVKEIKNGRLAMF M GFF
Sbjct: 74 GGAEYYRITNGL--DFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFGMLGFF 131
Query: 62 VQAIVTGKGPLENLADHL 79
+QA VTG+GP+ENLA HL
Sbjct: 132 IQAYVTGEGPVENLAKHL 149
>gi|414884910|tpg|DAA60924.1| TPA: hypothetical protein ZEAMMB73_235289 [Zea mays]
Length = 315
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
Query: 22 YPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
YPGG FDPLGL+ DP AF +LKVKEIKNGRLAM + FGF++QA VTGKGP++NL +HL+
Sbjct: 244 YPGGPLFDPLGLSKDPVAFEDLKVKEIKNGRLAMVAWFGFYIQAAVTGKGPVQNLVEHLS 303
Query: 81 DPVNNN 86
DP+NNN
Sbjct: 304 DPLNNN 309
>gi|226500382|ref|NP_001141936.1| uncharacterized protein LOC100274085 [Zea mays]
gi|194706506|gb|ACF87337.1| unknown [Zea mays]
gi|414884911|tpg|DAA60925.1| TPA: hypothetical protein ZEAMMB73_235289 [Zea mays]
gi|414884912|tpg|DAA60926.1| TPA: hypothetical protein ZEAMMB73_235289 [Zea mays]
Length = 164
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
Query: 22 YPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
YPGG FDPLGL+ DP AF +LKVKEIKNGRLAM + FGF++QA VTGKGP++NL +HL+
Sbjct: 93 YPGGPLFDPLGLSKDPVAFEDLKVKEIKNGRLAMVAWFGFYIQAAVTGKGPVQNLVEHLS 152
Query: 81 DPVNNN 86
DP+NNN
Sbjct: 153 DPLNNN 158
>gi|358248178|ref|NP_001240088.1| uncharacterized protein LOC100786260 [Glycine max]
gi|255636882|gb|ACU18774.1| unknown [Glycine max]
Length = 331
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
Query: 22 YPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
YPGG+ FDPL L++DPEAF ELKVKEIKNGRLAM + GF+VQA +TGKGP++NL DH++
Sbjct: 254 YPGGALFDPLNLSNDPEAFEELKVKEIKNGRLAMVAWLGFYVQAALTGKGPVQNLIDHIS 313
Query: 81 DPVNNN 86
DP +NN
Sbjct: 314 DPFHNN 319
>gi|302835678|ref|XP_002949400.1| hypothetical protein VOLCADRAFT_104309 [Volvox carteri f.
nagariensis]
gi|300265227|gb|EFJ49419.1| hypothetical protein VOLCADRAFT_104309 [Volvox carteri f.
nagariensis]
Length = 286
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 62/100 (62%), Gaps = 14/100 (14%)
Query: 1 MGAVEGYRIAG-GPLG-------------EVTDPLYPGGSFDPLGLADDPEAFAELKVKE 46
MGAVE YR G GP G E D +YPGG FDPLGLADDPE F ELKVKE
Sbjct: 173 MGAVEFYRRNGTGPAGYSPGIGKFDSSVFEGLDSIYPGGPFDPLGLADDPEVFQELKVKE 232
Query: 47 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 86
IKNGRLAM S+ F +Q+ VTG+GP N H+ DP N
Sbjct: 233 IKNGRLAMVSVLAFAIQSYVTGEGPYTNWIKHVQDPFGYN 272
>gi|326498823|dbj|BAK02397.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508330|dbj|BAJ99432.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 310
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
Query: 22 YPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
YPGG+ FDPLGL+ DP AF E KVKEIKNGRLAM + GF++QA VTGKGP++NLA+HL+
Sbjct: 239 YPGGALFDPLGLSKDPVAFEEFKVKEIKNGRLAMVAWIGFYIQAAVTGKGPVQNLAEHLS 298
Query: 81 DPVNNN 86
DP++NN
Sbjct: 299 DPLHNN 304
>gi|125563122|gb|EAZ08502.1| hypothetical protein OsI_30775 [Oryza sativa Indica Group]
Length = 321
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
Query: 22 YPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
YPGG+ FDPLGL+ DP AF +LKVKEIKNGRLAM + GF++QA VTGKGP++NL +HL+
Sbjct: 250 YPGGALFDPLGLSKDPVAFEDLKVKEIKNGRLAMVAWLGFYIQAAVTGKGPIQNLVEHLS 309
Query: 81 DPVNNN 86
DP++NN
Sbjct: 310 DPLHNN 315
>gi|375152222|gb|AFA36569.1| putative chlorophyll a/b-binding protein, partial [Lolium perenne]
Length = 206
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
Query: 22 YPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
YPGG+ FDPLGL+ DP AF ELKVKEIKNGRLAM + GF+VQA VTGKGP++NL +HL+
Sbjct: 135 YPGGALFDPLGLSKDPVAFEELKVKEIKNGRLAMVAWLGFYVQAAVTGKGPVQNLIEHLS 194
Query: 81 DPVNNN 86
DP++NN
Sbjct: 195 DPLHNN 200
>gi|115478412|ref|NP_001062801.1| Os09g0296800 [Oryza sativa Japonica Group]
gi|50725078|dbj|BAD33211.1| putative chlorophyll a/b-binding protein [Oryza sativa Japonica
Group]
gi|113631034|dbj|BAF24715.1| Os09g0296800 [Oryza sativa Japonica Group]
Length = 321
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
Query: 22 YPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
YPGG+ FDPLGL+ DP AF +LKVKEIKNGRLAM + GF++QA VTGKGP++NL +HL+
Sbjct: 250 YPGGALFDPLGLSKDPVAFEDLKVKEIKNGRLAMVAWLGFYIQAAVTGKGPIQNLVEHLS 309
Query: 81 DPVNNN 86
DP++NN
Sbjct: 310 DPLHNN 315
>gi|226872|prf||1609235A chlorophyll a/b binding protein
Length = 273
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 14 LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG DP YPGG F+PLG D ++ ELK+KEIKNGRLAM ++ G+F+QA+VTG GP
Sbjct: 192 LGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGVGPY 251
Query: 73 ENLADHLADPVNNN 86
+NL DHLADPVNNN
Sbjct: 252 QNLLDHLADPVNNN 265
>gi|115813|sp|P27522.1|CB13_SOLLC RecName: Full=Chlorophyll a-b binding protein 8, chloroplastic;
AltName: Full=LHCI type III CAB-8; Flags: Precursor
gi|19182|emb|CAA33330.1| Type III chlorophyll a/b-binding protein [Solanum lycopersicum]
Length = 273
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 14 LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG DP YPGG F+PLG D ++ ELK+KEIKNGRLAM ++ G+F+QA+VTG GP
Sbjct: 192 LGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGVGPY 251
Query: 73 ENLADHLADPVNNN 86
+NL DHLADPVNNN
Sbjct: 252 QNLLDHLADPVNNN 265
>gi|125605083|gb|EAZ44119.1| hypothetical protein OsJ_28744 [Oryza sativa Japonica Group]
Length = 245
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
Query: 22 YPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
YPGG+ FDPLGL+ DP AF +LKVKEIKNGRLAM + GF++QA VTGKGP++NL +HL+
Sbjct: 174 YPGGALFDPLGLSKDPVAFEDLKVKEIKNGRLAMVAWLGFYIQAAVTGKGPIQNLVEHLS 233
Query: 81 DPVNNN 86
DP++NN
Sbjct: 234 DPLHNN 239
>gi|553065|gb|AAA65447.1| chlorophyll a/b binding protein, partial [Euglena gracilis]
Length = 334
Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 54/63 (85%), Gaps = 1/63 (1%)
Query: 1 MGAVEGYRIAGG-PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MGAVEGYR GG PLG+ D LYPGG FDPLGLA+DP+AFAELKVKE+KNGRLAM +M G
Sbjct: 272 MGAVEGYRYGGGWPLGDDLDRLYPGGPFDPLGLANDPDAFAELKVKEVKNGRLAMVAMLG 331
Query: 60 FFV 62
F+V
Sbjct: 332 FYV 334
>gi|242044232|ref|XP_002459987.1| hypothetical protein SORBIDRAFT_02g020290 [Sorghum bicolor]
gi|241923364|gb|EER96508.1| hypothetical protein SORBIDRAFT_02g020290 [Sorghum bicolor]
Length = 314
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
Query: 22 YPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
YPGG+ FDPLGL+ DP AF +LKVKEIKNGRLAM + GF++QA VTGKGP++NL +HL+
Sbjct: 243 YPGGALFDPLGLSKDPVAFEDLKVKEIKNGRLAMVAWLGFYIQAAVTGKGPVQNLVEHLS 302
Query: 81 DPVNNN 86
DP++NN
Sbjct: 303 DPLHNN 308
>gi|154357500|gb|ABS78774.1| At4g10340-like protein [Arabidopsis halleri subsp. halleri]
Length = 149
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/78 (65%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Query: 2 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
G E YRI + D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMF+M GFF
Sbjct: 74 GGAEYYRITNEL--DFEDKLHPGGPFDPLGLAKDPDQGALLKVKEIKNGRLAMFAMLGFF 131
Query: 62 VQAIVTGKGPLENLADHL 79
+QA VTG+GP+ENLA HL
Sbjct: 132 IQAYVTGEGPVENLAKHL 149
>gi|225457685|ref|XP_002276647.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic [Vitis vinifera]
gi|297745621|emb|CBI40786.3| unnamed protein product [Vitis vinifera]
Length = 331
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 22 YPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
YPGG+ FDPL L+ DP AF ELKVKEIKNGRLAM + GF++QA TGKGP++NL DHLA
Sbjct: 258 YPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAAATGKGPVQNLLDHLA 317
Query: 81 DPVNNN 86
DP +NN
Sbjct: 318 DPFHNN 323
>gi|116519121|gb|ABJ99590.1| type III chlorophyll a/b-binding protein [Lycoris aurea]
Length = 275
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 14 LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG DP YPGG F+PLG D ++ ELK+KE+KNGRLAM ++ GFF+Q +VTG GP
Sbjct: 194 LGGSGDPAYPGGPIFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGFFIQGLVTGVGPF 253
Query: 73 ENLADHLADPVNNN 86
+NL DHLADPVNNN
Sbjct: 254 QNLLDHLADPVNNN 267
>gi|116519125|gb|ABJ99591.1| type III chlorophyll a/b-binding protein [Lycoris aurea]
Length = 275
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Query: 14 LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG DP YPGG F+PLG D + ELK+KE+KNGRLAM ++ GFF+Q +VTG GP
Sbjct: 194 LGGSGDPAYPGGPIFNPLGFGKDERSMKELKLKEVKNGRLAMLAILGFFIQGLVTGVGPF 253
Query: 73 ENLADHLADPVNNN 86
+NL DHLADPVNNN
Sbjct: 254 QNLLDHLADPVNNN 267
>gi|357157898|ref|XP_003577951.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
[Brachypodium distachyon]
Length = 318
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 22 YPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
YPGG+ FDPLGL+ DP F ELKVKEIKNGRLAM + GF++QA VTGKGP++NL +HL+
Sbjct: 247 YPGGALFDPLGLSKDPVGFEELKVKEIKNGRLAMVAWLGFYLQAAVTGKGPVQNLVEHLS 306
Query: 81 DPVNNN 86
DP++NN
Sbjct: 307 DPLHNN 312
>gi|357495587|ref|XP_003618082.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355519417|gb|AET01041.1| Chlorophyll a-b binding protein [Medicago truncatula]
Length = 557
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 14 LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG +P YPGG F+PLG D ++ ELK+KE+KNGRLAM ++ G+F+QA+VTG GP
Sbjct: 196 LGGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQALVTGVGPY 255
Query: 73 ENLADHLADPVNNN 86
+NL DHLADPVNNN
Sbjct: 256 QNLLDHLADPVNNN 269
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 14 LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG +P YPGG F+PLG D ++ ELK+KE+KNGRLAM ++ G+F+QA+VTG GP
Sbjct: 476 LGGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQALVTGVGPY 535
Query: 73 ENLADHLADPVNNN 86
+NL DHLADPVNNN
Sbjct: 536 QNLLDHLADPVNNN 549
>gi|145079310|tpg|DAA05909.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm3 [Acetabularia acetabulum]
Length = 208
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 49/57 (85%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 57
MG VEGYR+ GGP GE D LYPG SFDPLGLADDP+ FAELK+KEIKNGRLAMFSM
Sbjct: 152 MGLVEGYRVNGGPAGEGLDSLYPGESFDPLGLADDPDTFAELKIKEIKNGRLAMFSM 208
>gi|357495589|ref|XP_003618083.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355519418|gb|AET01042.1| Chlorophyll a-b binding protein [Medicago truncatula]
Length = 573
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 14 LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG +P YPGG F+PLG D ++ ELK+KE+KNGRLAM ++ G+F+QA+VTG GP
Sbjct: 196 LGGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQALVTGVGPY 255
Query: 73 ENLADHLADPVNNN 86
+NL DHLADPVNNN
Sbjct: 256 QNLLDHLADPVNNN 269
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 14 LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG +P YPGG F+PLG D ++ ELK+KE+KNGRLAM ++ G+F+QA+VTG GP
Sbjct: 492 LGGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQALVTGVGPY 551
Query: 73 ENLADHLADPVNNN 86
+NL DHLADPVNNN
Sbjct: 552 QNLLDHLADPVNNN 565
>gi|388515199|gb|AFK45661.1| unknown [Medicago truncatula]
Length = 277
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 14 LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG +P YPGG F+PLG D ++ ELK+KE+KNGRLAM ++ G+F+QA+VTG GP
Sbjct: 196 LGGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQALVTGVGPY 255
Query: 73 ENLADHLADPVNNN 86
+NL DHLADPVNNN
Sbjct: 256 QNLLDHLADPVNNN 269
>gi|255567170|ref|XP_002524566.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223536119|gb|EEF37774.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 273
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 14 LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG DP YPGG F+PLG D ++ ELK+KE+KNGRLAM ++ G+FVQ +VTG GP
Sbjct: 192 LGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPY 251
Query: 73 ENLADHLADPVNNN 86
+NL DHLADPVNNN
Sbjct: 252 QNLLDHLADPVNNN 265
>gi|449442612|ref|XP_004139075.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like
[Cucumis sativus]
gi|449532766|ref|XP_004173351.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like
[Cucumis sativus]
Length = 273
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 14 LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG DP YPGG F+PLG D ++ ELK+KEIKNGRLAM ++ G+F+Q +VTG GP
Sbjct: 192 LGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPY 251
Query: 73 ENLADHLADPVNNN 86
+NL DHL+DPVNNN
Sbjct: 252 QNLLDHLSDPVNNN 265
>gi|224083380|ref|XP_002307004.1| light-harvesting complex II protein Lhcb7 [Populus trichocarpa]
gi|222856453|gb|EEE94000.1| light-harvesting complex II protein Lhcb7 [Populus trichocarpa]
Length = 338
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 22 YPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
YPGG FDPL L+ DP +F ELKVKEIKNGRLAM + GF++QA +TGKGP+ENL +H++
Sbjct: 265 YPGGILFDPLNLSKDPVSFEELKVKEIKNGRLAMVAWLGFYIQAALTGKGPVENLVEHIS 324
Query: 81 DPVNNN 86
DP++NN
Sbjct: 325 DPLHNN 330
>gi|15223108|ref|NP_177783.1| putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|12323973|gb|AAG51944.1|AC015450_5 putative chlorophyll A-B binding protein; 65434-67056 [Arabidopsis
thaliana]
gi|332197739|gb|AEE35860.1| putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
Length = 327
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 22 YPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
YPGG+ FDPL L++DP AF +LKVKEIKNGRLAM + GF+ QA TGKGP++NL DH++
Sbjct: 255 YPGGTLFDPLNLSEDPVAFEDLKVKEIKNGRLAMVAWLGFYAQAAFTGKGPVQNLVDHVS 314
Query: 81 DPVNNN 86
DP++NN
Sbjct: 315 DPLHNN 320
>gi|297839529|ref|XP_002887646.1| chlorophyll A-B binding family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333487|gb|EFH63905.1| chlorophyll A-B binding family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 330
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 22 YPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
YPGG+ FDPL L++DP AF +LKVKEIKNGRLAM + GF+ QA TGKGP++NL DH++
Sbjct: 258 YPGGTLFDPLNLSEDPVAFEDLKVKEIKNGRLAMVAWLGFYAQAAFTGKGPVQNLVDHVS 317
Query: 81 DPVNNN 86
DP++NN
Sbjct: 318 DPLHNN 323
>gi|427338317|gb|AFY52157.1| chlorophyll binding protein, partial [Clermontia kohalae]
gi|427338319|gb|AFY52158.1| chlorophyll binding protein, partial [Clermontia kohalae]
gi|427338321|gb|AFY52159.1| chlorophyll binding protein, partial [Clermontia kohalae]
gi|427338323|gb|AFY52160.1| chlorophyll binding protein, partial [Clermontia kohalae]
gi|427338325|gb|AFY52161.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338327|gb|AFY52162.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338329|gb|AFY52163.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338331|gb|AFY52164.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338333|gb|AFY52165.1| chlorophyll binding protein, partial [Clermontia kakeana]
gi|427338335|gb|AFY52166.1| chlorophyll binding protein, partial [Clermontia kakeana]
gi|427338337|gb|AFY52167.1| chlorophyll binding protein, partial [Clermontia kakeana]
gi|427338339|gb|AFY52168.1| chlorophyll binding protein, partial [Clermontia grandiflora subsp.
grandiflora]
gi|427338341|gb|AFY52169.1| chlorophyll binding protein, partial [Clermontia grandiflora subsp.
grandiflora]
gi|427338343|gb|AFY52170.1| chlorophyll binding protein, partial [Clermontia grandiflora subsp.
grandiflora]
gi|427338345|gb|AFY52171.1| chlorophyll binding protein, partial [Clermontia grandiflora subsp.
grandiflora]
gi|427338347|gb|AFY52172.1| chlorophyll binding protein, partial [Clermontia micrantha]
gi|427338349|gb|AFY52173.1| chlorophyll binding protein, partial [Clermontia micrantha]
gi|427338351|gb|AFY52174.1| chlorophyll binding protein, partial [Clermontia micrantha]
gi|427338353|gb|AFY52175.1| chlorophyll binding protein, partial [Clermontia micrantha]
gi|427338355|gb|AFY52176.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
gi|427338357|gb|AFY52177.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
gi|427338359|gb|AFY52178.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
gi|427338361|gb|AFY52179.1| chlorophyll binding protein, partial [Clermontia tuberculata]
gi|427338363|gb|AFY52180.1| chlorophyll binding protein, partial [Clermontia tuberculata]
gi|427338365|gb|AFY52181.1| chlorophyll binding protein, partial [Clermontia tuberculata]
gi|427338367|gb|AFY52182.1| chlorophyll binding protein, partial [Clermontia tuberculata]
gi|427338369|gb|AFY52183.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
gi|427338371|gb|AFY52184.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
gi|427338373|gb|AFY52185.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
gi|427338375|gb|AFY52186.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
gi|427338383|gb|AFY52190.1| chlorophyll binding protein, partial [Clermontia waimeae]
gi|427338385|gb|AFY52191.1| chlorophyll binding protein, partial [Clermontia waimeae]
gi|427338387|gb|AFY52192.1| chlorophyll binding protein, partial [Clermontia waimeae]
gi|427338389|gb|AFY52193.1| chlorophyll binding protein, partial [Clermontia waimeae]
gi|427338391|gb|AFY52194.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338393|gb|AFY52195.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338395|gb|AFY52196.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338397|gb|AFY52197.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338399|gb|AFY52198.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338401|gb|AFY52199.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338403|gb|AFY52200.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338405|gb|AFY52201.1| chlorophyll binding protein, partial [Clermontia montis-loa]
gi|427338407|gb|AFY52202.1| chlorophyll binding protein, partial [Clermontia montis-loa]
gi|427338409|gb|AFY52203.1| chlorophyll binding protein, partial [Clermontia montis-loa]
gi|427338411|gb|AFY52204.1| chlorophyll binding protein, partial [Clermontia calophylla]
gi|427338413|gb|AFY52205.1| chlorophyll binding protein, partial [Clermontia clermontioides
subsp. clermontioides]
gi|427338415|gb|AFY52206.1| chlorophyll binding protein, partial [Clermontia clermontioides
subsp. clermontioides]
gi|427338417|gb|AFY52207.1| chlorophyll binding protein, partial [Clermontia clermontioides
subsp. clermontioides]
gi|427338419|gb|AFY52208.1| chlorophyll binding protein, partial [Clermontia montis-loa]
gi|427338421|gb|AFY52209.1| chlorophyll binding protein, partial [Clermontia montis-loa]
gi|427338423|gb|AFY52210.1| chlorophyll binding protein, partial [Clermontia montis-loa]
gi|427338425|gb|AFY52211.1| chlorophyll binding protein, partial [Clermontia montis-loa]
gi|427338427|gb|AFY52212.1| chlorophyll binding protein, partial [Clermontia calophylla]
gi|427338429|gb|AFY52213.1| chlorophyll binding protein, partial [Clermontia calophylla]
gi|427338431|gb|AFY52214.1| chlorophyll binding protein, partial [Clermontia waimeae]
gi|427338433|gb|AFY52215.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338435|gb|AFY52216.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338437|gb|AFY52217.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338439|gb|AFY52218.1| chlorophyll binding protein, partial [Clermontia oblongifolia
subsp. oblongifolia]
gi|427338441|gb|AFY52219.1| chlorophyll binding protein, partial [Clermontia kakeana]
gi|427338443|gb|AFY52220.1| chlorophyll binding protein, partial [Clermontia peleana]
gi|427338445|gb|AFY52221.1| chlorophyll binding protein, partial [Clermontia singuliflora]
gi|427338447|gb|AFY52222.1| chlorophyll binding protein, partial [Clermontia singuliflora]
gi|427338449|gb|AFY52223.1| chlorophyll binding protein, partial [Clermontia singuliflora]
gi|427338451|gb|AFY52224.1| chlorophyll binding protein, partial [Clermontia singuliflora]
gi|427338453|gb|AFY52225.1| chlorophyll binding protein, partial [Clermontia drepanomorpha]
gi|427338455|gb|AFY52226.1| chlorophyll binding protein, partial [Clermontia lindseyana]
gi|428230858|gb|AFY99051.1| chlorophyll binding protein, partial [Clermontia kakeana]
gi|428230860|gb|AFY99052.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
Length = 197
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 19 DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
DP YPGG F +PLG D ++ ELK+KEIKNGRLAM ++ G+F+Q +VTG GP +NL D
Sbjct: 123 DPAYPGGPFFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPFQNLLD 182
Query: 78 HLADPVNNNA 87
HLADPVNNN
Sbjct: 183 HLADPVNNNV 192
>gi|87313189|gb|ABD37891.1| light-harvesting chlorophyll-a/b binding protein Lhcb5 [Mesostigma
viride]
Length = 280
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 4 VEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
+E YR GP G DPLYPGG FDPLGLA DP ELKVKEIKNGRLAM + GF
Sbjct: 181 IENYRYQQDGPWGTGLDPLYPGGKYFDPLGLASDPSKADELKVKEIKNGRLAMMAFLGFV 240
Query: 62 VQAIVTGKGPLENLADHLADPVNNN 86
VQ VT +GP N + HLADP N
Sbjct: 241 VQYFVTKEGPYANWSKHLADPFGYN 265
>gi|302854493|ref|XP_002958754.1| hypothetical protein VOLCADRAFT_69878 [Volvox carteri f.
nagariensis]
gi|300255929|gb|EFJ40210.1| hypothetical protein VOLCADRAFT_69878 [Volvox carteri f.
nagariensis]
Length = 55
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 48/54 (88%)
Query: 44 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
VKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DHLA+P NNA+A+AT F P
Sbjct: 1 VKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLNDHLANPAVNNAFAFATKFTPS 54
>gi|293337343|gb|ADE42967.1| type III chlorophyll a/b binding protein [Gardenia jasminoides]
Length = 274
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Query: 19 DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
+P+YPGG F+PLG D ++ +LK+KE+KNGRLAM ++ G+FVQA+VTG GP +NL D
Sbjct: 198 NPIYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQALVTGVGPYQNLLD 257
Query: 78 HLADPVNNN 86
HL+DPVNNN
Sbjct: 258 HLSDPVNNN 266
>gi|40455722|gb|AAR85970.1| type III chlorophyll a/b-binding protein [Nicotiana tabacum]
Length = 85
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 4/82 (4%)
Query: 14 LGEVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG DP YPGG F +PLG D ++ +LK+KE+KNGRLAM ++ G+F+Q +VTG GP
Sbjct: 4 LGGSGDPAYPGGPFFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGYFIQGLVTGVGPY 63
Query: 73 ENLADHLADPVNNNAWAYATNF 94
+NL DHLADPVNNN TNF
Sbjct: 64 QNLLDHLADPVNNNIL---TNF 82
>gi|145079746|tpg|DAA05928.1| TPA_inf: chloroplast light-harvesting complex protein CP26
precursor Lhcb5 [Mesostigma viride]
Length = 287
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 4 VEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 61
+E YR GP G DPLYPGG FDPLGLA DP ELKVKEIKNGRLAM + GF
Sbjct: 188 IENYRYQQDGPWGTGLDPLYPGGKYFDPLGLASDPSKADELKVKEIKNGRLAMMAFLGFV 247
Query: 62 VQAIVTGKGPLENLADHLADPVNNN 86
VQ VT +GP N + HLADP N
Sbjct: 248 VQYFVTKEGPYANWSKHLADPFGYN 272
>gi|427338377|gb|AFY52187.1| chlorophyll binding protein, partial [Clermontia fauriei]
gi|427338379|gb|AFY52188.1| chlorophyll binding protein, partial [Clermontia fauriei]
gi|427338381|gb|AFY52189.1| chlorophyll binding protein, partial [Clermontia fauriei]
gi|428230862|gb|AFY99053.1| chlorophyll binding protein, partial [Clermontia fauriei]
Length = 197
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 19 DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
DP YPGG F +PLG D + ELK+KEIKNGRLAM ++ G+F+Q +VTG GP +NL D
Sbjct: 123 DPAYPGGPFFNPLGFGKDETSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPFQNLLD 182
Query: 78 HLADPVNNNA 87
HLADPVNNN
Sbjct: 183 HLADPVNNNV 192
>gi|116791821|gb|ABK26121.1| unknown [Picea sitchensis]
gi|224284036|gb|ACN39756.1| unknown [Picea sitchensis]
gi|224284482|gb|ACN39975.1| unknown [Picea sitchensis]
gi|224284909|gb|ACN40184.1| unknown [Picea sitchensis]
gi|224285218|gb|ACN40335.1| unknown [Picea sitchensis]
gi|224285824|gb|ACN40626.1| unknown [Picea sitchensis]
Length = 289
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 14 LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG +P YPGG F+PLG D ++ ELK+KE+KNGRLAM ++ G+F+Q +VTG GP
Sbjct: 207 LGGSGNPSYPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAIVGYFIQGLVTGVGPF 266
Query: 73 ENLADHLADPVNNN 86
+NL DHLADPVNNN
Sbjct: 267 QNLLDHLADPVNNN 280
>gi|333691283|gb|AEF79974.1| chloroplast minor chlorophyll a-b binding protein of photosystem II
[Dunaliella salina]
Length = 283
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 62/100 (62%), Gaps = 14/100 (14%)
Query: 1 MGAVEGYRIAG-GPLG-------------EVTDPLYPGGSFDPLGLADDPEAFAELKVKE 46
+GAVE +R+ G GP G + D LYPGG FDPL LADDPE FAEL+VKE
Sbjct: 170 LGAVEKFRVDGTGPAGFSPGVGKFDSDIFDGLDQLYPGGPFDPLNLADDPEVFAELQVKE 229
Query: 47 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 86
KNGRLAM + F +Q+ VTG+GP N H++DP N
Sbjct: 230 TKNGRLAMVGVLAFAIQSYVTGEGPYANFTKHISDPFGYN 269
>gi|356554088|ref|XP_003545381.1| PREDICTED: chlorophyll a-b binding protein 3, chloroplastic-like
isoform 1 [Glycine max]
gi|356554090|ref|XP_003545382.1| PREDICTED: chlorophyll a-b binding protein 3, chloroplastic-like
isoform 2 [Glycine max]
Length = 276
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 14 LGEVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG +P YPGG F +PLG D ++ +LK+KE+KNGRLAM ++ G+FVQA+VTG GP
Sbjct: 195 LGGSGEPAYPGGPFFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQALVTGVGPY 254
Query: 73 ENLADHLADPVNNN 86
+NL DHLADPV+NN
Sbjct: 255 QNLLDHLADPVHNN 268
>gi|356501755|ref|XP_003519689.1| PREDICTED: chlorophyll a-b binding protein 3, chloroplastic-like
[Glycine max]
Length = 276
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 14 LGEVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG +P YPGG F +PLG D ++ +LK+KE+KNGRLAM ++ G+FVQA+VTG GP
Sbjct: 195 LGGSGEPAYPGGPFFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQALVTGVGPY 254
Query: 73 ENLADHLADPVNNN 86
+NL DHLADPV+NN
Sbjct: 255 QNLLDHLADPVHNN 268
>gi|296090224|emb|CBI40043.3| unnamed protein product [Vitis vinifera]
Length = 209
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Query: 14 LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG DP YPGG F+PLG D ++ +LK+KE+KNGRLAM ++ G+F Q VTG GPL
Sbjct: 127 LGGSGDPAYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFAQGPVTGVGPL 186
Query: 73 ENLADHLADPVNNN 86
+NL DHLADPVNNN
Sbjct: 187 QNLLDHLADPVNNN 200
>gi|21554335|gb|AAM63442.1| PSI type III chlorophyll a/b-binding protein, putative [Arabidopsis
thaliana]
Length = 273
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 19 DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
+P YPGG F +PLG D ++ ELK+KE+KNGRLAM ++ G+F+Q +VTG GP +NL D
Sbjct: 197 NPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLD 256
Query: 78 HLADPVNNN 86
HLADPVNNN
Sbjct: 257 HLADPVNNN 265
>gi|430947|gb|AAA18206.1| PSI type III chlorophyll a/b-binding protein [Arabidopsis thaliana]
Length = 273
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 19 DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
+P YPGG F +PLG D ++ ELK+KE+KNGRLAM ++ G+F+Q +VTG GP +NL D
Sbjct: 197 NPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLD 256
Query: 78 HLADPVNNN 86
HLADPVNNN
Sbjct: 257 HLADPVNNN 265
>gi|15219941|ref|NP_176347.1| light-harvesting complex I chlorophyll a/b binding protein 3
[Arabidopsis thaliana]
gi|334183551|ref|NP_001185280.1| light-harvesting complex I chlorophyll a/b binding protein 3
[Arabidopsis thaliana]
gi|4585882|gb|AAD25555.1|AC005850_12 PSI type III chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|16649019|gb|AAL24361.1| PSI type III chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|20260044|gb|AAM13369.1| PSI type III chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|332195725|gb|AEE33846.1| light-harvesting complex I chlorophyll a/b binding protein 3
[Arabidopsis thaliana]
gi|332195727|gb|AEE33848.1| light-harvesting complex I chlorophyll a/b binding protein 3
[Arabidopsis thaliana]
Length = 273
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 19 DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
+P YPGG F +PLG D ++ ELK+KE+KNGRLAM ++ G+F+Q +VTG GP +NL D
Sbjct: 197 NPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLD 256
Query: 78 HLADPVNNN 86
HLADPVNNN
Sbjct: 257 HLADPVNNN 265
>gi|297840405|ref|XP_002888084.1| hypothetical protein ARALYDRAFT_475174 [Arabidopsis lyrata subsp.
lyrata]
gi|297333925|gb|EFH64343.1| hypothetical protein ARALYDRAFT_475174 [Arabidopsis lyrata subsp.
lyrata]
Length = 273
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 19 DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
+P YPGG F +PLG D ++ ELK+KE+KNGRLAM ++ G+F+Q +VTG GP +NL D
Sbjct: 197 NPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLD 256
Query: 78 HLADPVNNN 86
HLADPVNNN
Sbjct: 257 HLADPVNNN 265
>gi|428230864|gb|AFY99054.1| chlorophyll binding protein, partial [Cyanea asplenifolia]
Length = 197
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 19 DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
+P YPGG F +PLG D ++ ELK+KEIKNGRLAM ++ G+F+Q +VTG GP +NL D
Sbjct: 123 NPAYPGGPFFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPFQNLLD 182
Query: 78 HLADPVNNNA 87
HLADPVNNN
Sbjct: 183 HLADPVNNNV 192
>gi|225436257|ref|XP_002273201.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic [Vitis
vinifera]
Length = 274
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Query: 14 LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG DP YPGG F+PLG D ++ +LK+KE+KNGRLAM ++ G+F Q VTG GPL
Sbjct: 192 LGGSGDPAYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFAQGPVTGVGPL 251
Query: 73 ENLADHLADPVNNN 86
+NL DHLADPVNNN
Sbjct: 252 QNLLDHLADPVNNN 265
>gi|157965841|gb|ABW06957.1| chloroplast light-harvesting complex II protein precursor [Euglena
gracilis]
Length = 562
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 57/89 (64%), Gaps = 7/89 (7%)
Query: 1 MGAVEGYRIAGGPLGEVTD---PLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 57
MG VE +R G E YPGG FDPL L PE LK+KEIKNGRLAM M
Sbjct: 261 MGPVEAWRWNGALASEAKSAERTTYPGGPFDPLKLGASPE----LKLKEIKNGRLAMVGM 316
Query: 58 FGFFVQAIVTGKGPLENLADHLADPVNNN 86
FGF+ Q+ VTG+GPL NLA HLADP +NN
Sbjct: 317 FGFWAQSYVTGEGPLANLAAHLADPAHNN 345
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 49/65 (75%), Gaps = 4/65 (6%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD 81
YPGG FDPL L PE LK+KEIKNGRLAM MFGF+ Q+ VTG+GPL NLA HLAD
Sbjct: 76 YPGGPFDPLKLGASPE----LKLKEIKNGRLAMVGMFGFWAQSYVTGEGPLANLAAHLAD 131
Query: 82 PVNNN 86
P +NN
Sbjct: 132 PAHNN 136
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 49/65 (75%), Gaps = 4/65 (6%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD 81
YPGG FDPL L PE LK+KEIKNGRLAM MFGF+ Q+ VTG+GPL NLA HLAD
Sbjct: 494 YPGGPFDPLKLGASPE----LKLKEIKNGRLAMVGMFGFWAQSYVTGEGPLANLAAHLAD 549
Query: 82 PVNNN 86
P +NN
Sbjct: 550 PAHNN 554
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 22 YPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 65
YPG FDPLGLA DPE FA+ + E+ +GR AM + G V +
Sbjct: 377 YPGDRGFDPLGLAKDPEDFAKNRDSEVYHGRWAMLGLVGCLVPEV 421
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 22 YPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 65
YPG FDP GLA DP FA+ + E+ +GR AM + G V +
Sbjct: 168 YPGDRGFDPFGLAKDPADFAKFRDSEVFHGRWAMLGLVGCLVPEV 212
>gi|428230866|gb|AFY99055.1| chlorophyll binding protein, partial [Lobelia erinus]
Length = 197
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 19 DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
DP YPGG F +PLG D ++ ELK+KEIKNGRLAM ++ G+F+Q +VTG GP +NL D
Sbjct: 123 DPAYPGGPFFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPFQNLLD 182
Query: 78 HLADPVNNNA 87
HLADPV+NN
Sbjct: 183 HLADPVSNNV 192
>gi|125656346|gb|ABN48563.1| chloroplast PSI type III chlorophyll a/b-binding protein [Brassica
juncea]
Length = 110
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 19 DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
+P YPGG F +PLG D ++ ELK+KE+KNGRLAM ++ G+FVQ +VTG GP +NL D
Sbjct: 34 NPAYPGGPFFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLD 93
Query: 78 HLADPVNNNA 87
HLADPVNNN
Sbjct: 94 HLADPVNNNV 103
>gi|20794|emb|CAA41407.1| Type III chlorophyll a /b-binding protein [Pinus sylvestris]
Length = 286
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 14 LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG +P YPGG F+PLG D ++ ELK+KE+KNGRLAM ++ G+F+Q +VTG GP
Sbjct: 205 LGGSGNPAYPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPF 264
Query: 73 ENLADHLADPVNNN 86
+NL DHLADPV+NN
Sbjct: 265 QNLLDHLADPVHNN 278
>gi|79320443|ref|NP_001031217.1| light-harvesting complex I chlorophyll a/b binding protein 3
[Arabidopsis thaliana]
gi|332195726|gb|AEE33847.1| light-harvesting complex I chlorophyll a/b binding protein 3
[Arabidopsis thaliana]
Length = 218
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 19 DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
+P YPGG F +PLG D ++ ELK+KE+KNGRLAM ++ G+F+Q +VTG GP +NL D
Sbjct: 142 NPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLD 201
Query: 78 HLADPVNNNA 87
HLADPVNNN
Sbjct: 202 HLADPVNNNV 211
>gi|449525738|ref|XP_004169873.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like [Cucumis sativus]
Length = 338
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 22 YPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
YPGG FDPL L+ D EAF ELKVKEIKNGRLAM + GF+ QA +TGKGP++NL +H+A
Sbjct: 262 YPGGVLFDPLNLSKDAEAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLNHIA 321
Query: 81 DPVNNN 86
DP +NN
Sbjct: 322 DPFHNN 327
>gi|312281797|dbj|BAJ33764.1| unnamed protein product [Thellungiella halophila]
Length = 273
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 19 DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
+P YPGG F +PLG + ++ ELK+KEIKNGRLAM ++ G+FVQ +VTG GP +NL D
Sbjct: 197 EPAYPGGPFFNPLGFGKNEKSMKELKLKEIKNGRLAMLAILGYFVQGLVTGVGPYQNLLD 256
Query: 78 HLADPVNNN 86
HLADPVNNN
Sbjct: 257 HLADPVNNN 265
>gi|168049357|ref|XP_001777130.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671573|gb|EDQ58123.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 348
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 22 YPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
YPGG+ FDPLGL D AF +LKVKE+KNGRLAM + GF+VQA+VT KGP++NL D L
Sbjct: 275 YPGGALFDPLGLTKDAAAFEDLKVKEMKNGRLAMVAWLGFYVQALVTQKGPIDNLFDFLE 334
Query: 81 DPVNNNAWAYA 91
DP++ N +AYA
Sbjct: 335 DPLHQNLFAYA 345
>gi|330318814|gb|AEC11067.1| chlorophyll a/b binding protein [Camellia sinensis]
Length = 107
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 53/78 (67%)
Query: 17 VTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 76
+ D L+P G FDPLGLA DP+ A LKVKEIKNGRL MF + GFF+QA VTG+GP+E LA
Sbjct: 23 LEDKLHPSGPFDPLGLAKDPDQGAILKVKEIKNGRLTMFPILGFFIQASVTGEGPVEKLA 82
Query: 77 DHLADPVNNNAWAYATNF 94
H+ DP N F
Sbjct: 83 KHVRDPFANKDLTKLAGF 100
>gi|384251912|gb|EIE25389.1| putative chlorophyll a/b-binding protein [Coccomyxa subellipsoidea
C-169]
Length = 287
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 55/72 (76%)
Query: 19 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 78
D YPGG FDPLGL+ DP +FA+L+VKEIKNGRLA+ + GF QA VT KGP+ +L D
Sbjct: 214 DKNYPGGLFDPLGLSKDPASFADLQVKEIKNGRLALVAWVGFAAQAAVTRKGPIADLLDF 273
Query: 79 LADPVNNNAWAY 90
ADPV+NN +AY
Sbjct: 274 AADPVHNNIFAY 285
>gi|75220641|sp|Q32904.1|CB23_PEA RecName: Full=Chlorophyll a-b binding protein 3, chloroplastic;
AltName: Full=LHCII type III CAB-3; Flags: Precursor
gi|309673|gb|AAA84545.1| light harvesting protein [Pisum sativum]
Length = 275
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 19 DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
+P YPGG F +PLG D ++ ELK+KE+KNGRLAM ++ G+F+Q +VTG GP +NL D
Sbjct: 199 NPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLD 258
Query: 78 HLADPVNNN 86
H+ADPVNNN
Sbjct: 259 HVADPVNNN 267
>gi|37780998|gb|AAP35043.1| chlorophyll a/b binding protein, partial [Vitis vinifera]
Length = 166
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Query: 14 LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG DP YPGG F+PLG D ++ +LK+KE+KNGRLAM ++ G+F Q VTG GPL
Sbjct: 84 LGGSGDPAYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFAQGPVTGVGPL 143
Query: 73 ENLADHLADPVNNN 86
+NL DHLADPVNNN
Sbjct: 144 QNLLDHLADPVNNN 157
>gi|449455655|ref|XP_004145567.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like [Cucumis sativus]
Length = 338
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 22 YPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
YPGG FDPL L+ D AF ELKVKEIKNGRLAM + GF+ QA +TGKGP++NL DH+A
Sbjct: 262 YPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHIA 321
Query: 81 DPVNNN 86
DP +NN
Sbjct: 322 DPFHNN 327
>gi|268612160|pdb|2WSC|3 Chain 3, Improved Model Of Plant Photosystem I
gi|268612178|pdb|2WSE|3 Chain 3, Improved Model Of Plant Photosystem I
gi|268612196|pdb|2WSF|3 Chain 3, Improved Model Of Plant Photosystem I
Length = 276
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 14 LGEVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG +P YPGG F +PLG D ++ +LK+KE+KNGRLAM ++ G+FVQA+VTG GP
Sbjct: 195 LGGSGEPAYPGGPFFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQALVTGVGPY 254
Query: 73 ENLADHLADPVNNN 86
+NL DHL DPV+NN
Sbjct: 255 QNLLDHLTDPVHNN 268
>gi|255640167|gb|ACU20374.1| unknown [Glycine max]
Length = 276
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 14 LGEVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG +P YPGG F +PLG D ++ +LK+KE+KNGRLAM ++ G+FVQA+VTG GP
Sbjct: 195 LGGSGEPAYPGGPFFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQALVTGVGPY 254
Query: 73 ENLADHLADPVNNN 86
+NL DHL DPV+NN
Sbjct: 255 QNLLDHLTDPVHNN 268
>gi|361067651|gb|AEW08137.1| Pinus taeda anonymous locus 2_784_02 genomic sequence
gi|383160502|gb|AFG62791.1| Pinus taeda anonymous locus 2_784_02 genomic sequence
gi|383160504|gb|AFG62792.1| Pinus taeda anonymous locus 2_784_02 genomic sequence
gi|383160506|gb|AFG62793.1| Pinus taeda anonymous locus 2_784_02 genomic sequence
gi|383160508|gb|AFG62794.1| Pinus taeda anonymous locus 2_784_02 genomic sequence
Length = 132
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Query: 14 LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG +P YPGG F+PLG D ++ ELK+KE+KNGRLAM ++ G+F+Q +VTG GP
Sbjct: 50 LGGSGNPAYPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPF 109
Query: 73 ENLADHLADPVNNN 86
+NL DHLADP NNN
Sbjct: 110 QNLLDHLADPFNNN 123
>gi|224131950|ref|XP_002321218.1| light-harvesting complex I protein Lhca3 [Populus trichocarpa]
gi|118485656|gb|ABK94678.1| unknown [Populus trichocarpa]
gi|222861991|gb|EEE99533.1| light-harvesting complex I protein Lhca3 [Populus trichocarpa]
Length = 274
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 14 LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG +P YPGG F+PLG D ++ +LK+KE+KNGRLAM ++ G+FVQ +VTG GP
Sbjct: 193 LGGSGEPAYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPY 252
Query: 73 ENLADHLADPVNNN 86
+NL DHLADPV+NN
Sbjct: 253 QNLLDHLADPVHNN 266
>gi|255646873|gb|ACU23907.1| unknown [Glycine max]
Length = 276
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 14 LGEVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG +P YPGG F +PLG D ++ +LK+KE+KNGRLAM ++ G+FV+A+VTG GP
Sbjct: 195 LGGSGEPAYPGGPFFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVRALVTGVGPY 254
Query: 73 ENLADHLADPVNNN 86
+NL DHLADPV+NN
Sbjct: 255 QNLLDHLADPVHNN 268
>gi|195613254|gb|ACG28457.1| chlorophyll a-b binding protein 8 [Zea mays]
gi|238013956|gb|ACR38013.1| unknown [Zea mays]
gi|413954858|gb|AFW87507.1| chlorophyll a-b binding protein 8 [Zea mays]
Length = 267
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 19 DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
DP YPGG F+PLG + ELK+KEIKNGRLAM ++ G+F+Q +VTG GP +NL D
Sbjct: 191 DPSYPGGPLFNPLGFGKTEKEMNELKLKEIKNGRLAMLAILGYFIQGLVTGVGPFQNLLD 250
Query: 78 HLADPVNNN 86
HLADPVNNN
Sbjct: 251 HLADPVNNN 259
>gi|118489937|gb|ABK96765.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 274
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 14 LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG +P YPGG F+PLG D ++ +LK+KE+KNGRLAM ++ G+FVQ +VTG GP
Sbjct: 193 LGGSGEPAYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPY 252
Query: 73 ENLADHLADPVNNN 86
+NL DHLADPV+NN
Sbjct: 253 QNLLDHLADPVHNN 266
>gi|302816085|ref|XP_002989722.1| light-harvesting complex [Selaginella moellendorffii]
gi|300142499|gb|EFJ09199.1| light-harvesting complex [Selaginella moellendorffii]
Length = 281
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 51/73 (69%)
Query: 14 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 73
LG DP YPGG F+P G D ++ LK+KE+KNGRLAM ++ G+F+QA TG GP +
Sbjct: 198 LGGSGDPAYPGGIFNPFGFGKDEKSMRTLKIKEVKNGRLAMLAILGYFIQAPFTGVGPFQ 257
Query: 74 NLADHLADPVNNN 86
NL DHLADP NN
Sbjct: 258 NLLDHLADPFANN 270
>gi|302824061|ref|XP_002993677.1| light harvesting complex [Selaginella moellendorffii]
gi|300138500|gb|EFJ05266.1| light harvesting complex [Selaginella moellendorffii]
Length = 281
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 51/73 (69%)
Query: 14 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 73
LG DP YPGG F+P G D ++ LK+KE+KNGRLAM ++ G+F+QA TG GP +
Sbjct: 198 LGGSGDPAYPGGIFNPFGFGKDEKSMRTLKIKEVKNGRLAMLAILGYFIQAPFTGVGPFQ 257
Query: 74 NLADHLADPVNNN 86
NL DHLADP NN
Sbjct: 258 NLLDHLADPFANN 270
>gi|226496924|ref|NP_001148598.1| chlorophyll a-b binding protein 8 [Zea mays]
gi|195620680|gb|ACG32170.1| chlorophyll a-b binding protein 8 [Zea mays]
Length = 151
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 19 DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
DP YPGG F+PLG + ELK+KEIKNGRLAM ++ G+F+Q +VTG GP +NL D
Sbjct: 75 DPSYPGGPLFNPLGFGKTEKEMNELKLKEIKNGRLAMLAILGYFIQGLVTGVGPFQNLLD 134
Query: 78 HLADPVNNNA 87
HLADPVNNN
Sbjct: 135 HLADPVNNNV 144
>gi|413954857|gb|AFW87506.1| chlorophyll a-b binding protein 8 [Zea mays]
Length = 209
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 19 DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
DP YPGG F+PLG + ELK+KEIKNGRLAM ++ G+F+Q +VTG GP +NL D
Sbjct: 133 DPSYPGGPLFNPLGFGKTEKEMNELKLKEIKNGRLAMLAILGYFIQGLVTGVGPFQNLLD 192
Query: 78 HLADPVNNNA 87
HLADPVNNN
Sbjct: 193 HLADPVNNNV 202
>gi|407971012|ref|NP_001234032.1| chlorophyll a-b binding protein 6A, chloroplastic [Solanum
lycopersicum]
gi|115764|sp|P12360.1|CB11_SOLLC RecName: Full=Chlorophyll a-b binding protein 6A, chloroplastic;
AltName: Full=LHCI type I CAB-6A; AltName:
Full=Light-harvesting complex I 26 kDa protein; Flags:
Precursor
gi|170494|gb|AAA34186.1| chlorophyll a/b binding protein precursor [Solanum lycopersicum]
Length = 246
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP F ELKVKEIKNGRLA+ ++ GF V Q+ G GPLENLA HLA
Sbjct: 168 YPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLA 227
Query: 81 DPVNNN 86
DP +NN
Sbjct: 228 DPWHNN 233
>gi|110736814|dbj|BAF00366.1| PSI type III chlorophyll a/b-binding protein [Arabidopsis thaliana]
Length = 273
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 19 DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
+P YPGG F +PLG D ++ ELK+KE+KNGRLAM ++ G+F+Q +VTG GP +NL D
Sbjct: 197 NPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLD 256
Query: 78 HLADPVNNN 86
HLA PVNNN
Sbjct: 257 HLAGPVNNN 265
>gi|493723|emb|CAA45523.1| photosystem I light-harvesting chlorophyll a/b-binding protein
[Nicotiana tabacum]
Length = 245
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP+ F ELKVKEIKNGRLA+ + GF V Q+ G GPLENLA HLA
Sbjct: 168 YPGGAFDPLGYSKDPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLA 227
Query: 81 DPVNNN 86
DP +NN
Sbjct: 228 DPWHNN 233
>gi|47026888|gb|AAT08668.1| chloroplast chlorophyll A-B binding protein 40 [Hyacinthus
orientalis]
Length = 237
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDP+AFAELKV E + +
Sbjct: 155 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPKAFAELKVNEDQEWQAGYVLDVRV 214
Query: 61 FVQAIVTG-KGPLENL 75
G +GPLE L
Sbjct: 215 LCSRDRDGPRGPLEEL 230
>gi|75265661|sp|Q9SDM1.1|CB121_HORVU RecName: Full=Chlorophyll a-b binding protein 1B-21, chloroplastic;
AltName: Full=LHCI type I CAB-1B-21; AltName:
Full=LHCI-730 chlorophyll a/b binding protein; AltName:
Full=Light-harvesting complex I 21 kDa protein; Flags:
Precursor
gi|6685157|gb|AAF23819.1|AF218305_2 chlorophyll a/b binding protein precursor [Hordeum vulgare]
Length = 245
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENLA HLA
Sbjct: 167 YPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLA 226
Query: 81 DPVNNN 86
DP +NN
Sbjct: 227 DPWHNN 232
>gi|544700|gb|AAB29485.1| light-harvesting complex I, partial (chloroplast) [Hordeum vulgare]
Length = 221
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENLA HLA
Sbjct: 143 YPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLA 202
Query: 81 DPVNNN 86
DP +NN
Sbjct: 203 DPWHNN 208
>gi|225690802|gb|ACO06087.1| chlorophyll a-b binding protein [Triticum aestivum]
Length = 291
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENLA HLA
Sbjct: 192 YPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLA 251
Query: 81 DPVNNNA 87
DP +N +
Sbjct: 252 DPWHNTS 258
>gi|170388|gb|AAA34140.1| chlorophyll a/b-binding protein [Solanum lycopersicum]
gi|225895|prf||1402358A photosystem I protein CAB
Length = 246
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP F ELKVKEIKNGRLA+ + GF V Q+ G GPLENLA HLA
Sbjct: 168 YPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLA 227
Query: 81 DPVNNN 86
DP +NN
Sbjct: 228 DPWHNN 233
>gi|398313943|emb|CCI55398.1| PSI antenna protein Lhca3 [Marchantia polymorpha]
Length = 279
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 14 LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG DP YPGG F+ LG D ++ +LKVKE+KNGRLAM ++ G+F+QAI TG GP
Sbjct: 198 LGGSGDPAYPGGPLFNFLGFGRDEKSMKDLKVKEVKNGRLAMLAVLGYFIQAIFTGVGPF 257
Query: 73 ENLADHLADPVNNN 86
+NL DHL+DP NNN
Sbjct: 258 QNLLDHLSDPANNN 271
>gi|7271947|gb|AAF44703.1|AF241525_1 chlorophyll a/b-binding protein type III [Alonsoa meridionalis]
Length = 193
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 14 LGEVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG DP YPGG F +PLG D ++ ELK+KE+KNGRLAM ++ G+F+Q +VTG GP
Sbjct: 121 LGGSGDPAYPGGPFFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPF 180
Query: 73 ENLADHLADPVNN 85
+NL DHLADP +N
Sbjct: 181 QNLLDHLADPWHN 193
>gi|168053458|ref|XP_001779153.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669412|gb|EDQ55999.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 54/80 (67%), Gaps = 3/80 (3%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGG-SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MG E RI P G D YPGG +FDPLG + DPE+FAELKVKEIKNGRLAM +M G
Sbjct: 134 MGVAEYARIKLSPEG--NDAFYPGGKAFDPLGFSSDPESFAELKVKEIKNGRLAMMAMAG 191
Query: 60 FFVQAIVTGKGPLENLADHL 79
F Q VTG PL+NL D L
Sbjct: 192 LFAQGAVTGVSPLQNLHDFL 211
>gi|226503327|ref|NP_001148183.1| chlorophyll a-b binding protein 6A [Zea mays]
gi|195612072|gb|ACG27866.1| chlorophyll a-b binding protein 6A [Zea mays]
gi|195616508|gb|ACG30084.1| chlorophyll a-b binding protein 6A [Zea mays]
gi|223975041|gb|ACN31708.1| unknown [Zea mays]
gi|413935743|gb|AFW70294.1| chlorophyll a-b binding protein 6A [Zea mays]
Length = 245
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP F E K+KEIKNGRLAM + GF V Q+ G GPLENLA HLA
Sbjct: 168 YPGGAFDPLGFSKDPAKFEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLASHLA 227
Query: 81 DPVNNN 86
DP +NN
Sbjct: 228 DPWHNN 233
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 21/36 (58%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 62
FDPLGLA PE F K E+ + R AM ++ G V
Sbjct: 69 FDPLGLATVPENFERFKESEVYHCRWAMLAVPGILV 104
>gi|224100797|ref|XP_002312019.1| light-harvesting complex I protein Lhca1 [Populus trichocarpa]
gi|222851839|gb|EEE89386.1| light-harvesting complex I protein Lhca1 [Populus trichocarpa]
Length = 244
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLA
Sbjct: 167 YPGGAFDPLGFSKDPKKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLA 226
Query: 81 DPVNNN 86
DP +NN
Sbjct: 227 DPWHNN 232
>gi|413935742|gb|AFW70293.1| LOW QUALITY PROTEIN: hypothetical protein ZEAMMB73_802965, partial
[Zea mays]
Length = 273
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP F E K+KEIKNGRLAM + GF V Q+ G GPLENLA HLA
Sbjct: 168 YPGGAFDPLGFSKDPAKFEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLASHLA 227
Query: 81 DPVNNN 86
DP +NN
Sbjct: 228 DPWHNN 233
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 21/36 (58%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 62
FDPLGLA PE F K E+ + R AM ++ G V
Sbjct: 69 FDPLGLATVPENFERFKESEVYHCRWAMLAVPGILV 104
>gi|87313167|gb|ABD37880.1| light-harvesting chlorophyll-a/b binding protein Lhca3 [Mesostigma
viride]
Length = 300
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 19 DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
DP YPGG+ F+ LG D ++ +LK+KE+KNGRLAM + GFF+QA+ TG+GP +NL D
Sbjct: 220 DPSYPGGAIFNFLGYGKDEKSMNDLKLKELKNGRLAMVATLGFFIQAMATGEGPFQNLTD 279
Query: 78 HLADPVNNN 86
HLADP NNN
Sbjct: 280 HLADPFNNN 288
>gi|145079550|tpg|DAA05918.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca3 [Mesostigma viride]
Length = 278
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 19 DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
DP YPGG+ F+ LG D ++ +LK+KE+KNGRLAM + GFF+QA+ TG+GP +NL D
Sbjct: 198 DPSYPGGAIFNFLGYGKDEKSMNDLKLKELKNGRLAMVATLGFFIQAMATGEGPFQNLTD 257
Query: 78 HLADPVNNN 86
HLADP NNN
Sbjct: 258 HLADPFNNN 266
>gi|242060664|ref|XP_002451621.1| hypothetical protein SORBIDRAFT_04g004770 [Sorghum bicolor]
gi|241931452|gb|EES04597.1| hypothetical protein SORBIDRAFT_04g004770 [Sorghum bicolor]
Length = 245
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP F E K+KEIKNGRLAM + GF V Q+ G GPLENLA HLA
Sbjct: 168 YPGGAFDPLGFSKDPAKFEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLA 227
Query: 81 DPVNNN 86
DP +NN
Sbjct: 228 DPWHNN 233
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 21/36 (58%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 62
FDPLGLA PE F K E+ + R AM ++ G V
Sbjct: 69 FDPLGLATVPENFERFKESEVYHCRWAMLAVPGILV 104
>gi|388491152|gb|AFK33642.1| unknown [Lotus japonicus]
Length = 241
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLA
Sbjct: 167 YPGGAFDPLGYSKDPKKFHEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLA 226
Query: 81 DPVNNN 86
DP +NN
Sbjct: 227 DPWHNN 232
>gi|222424528|dbj|BAH20219.1| AT3G54890 [Arabidopsis thaliana]
Length = 159
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP+ ELKVKEIKNGRLA+ + GF V Q+ G GPLENLA HLA
Sbjct: 85 YPGGAFDPLGYSKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLA 144
Query: 81 DPVNNN 86
DP +NN
Sbjct: 145 DPWHNN 150
>gi|302828616|ref|XP_002945875.1| light harvesting complex a protein [Volvox carteri f. nagariensis]
gi|5902596|gb|AAD55568.1|AF110786_1 light harvesting complex a protein [Volvox carteri f. nagariensis]
gi|300268690|gb|EFJ52870.1| light harvesting complex a protein [Volvox carteri f. nagariensis]
Length = 243
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD 81
YPGG FDPLGL+ D + A+ K+KEIKNGRLAM + GF Q TGKGP++NLA HLAD
Sbjct: 168 YPGGIFDPLGLSKDADKLADWKLKEIKNGRLAMVAFLGFTAQKFATGKGPIDNLAAHLAD 227
Query: 82 PVNNNAWAYATNFV 95
P + N YA+N V
Sbjct: 228 PWHVN---YASNGV 238
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
FDPLGL D EA + E+ + R AM ++ G + ++T G L
Sbjct: 54 FDPLGLGKDAEALRWYQQAELVHARTAMTAVAGILIPGLLTKAGAL 99
>gi|356559472|ref|XP_003548023.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
[Glycine max]
Length = 246
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLA
Sbjct: 169 YPGGAFDPLGYSKDPKTFHEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLAAHLA 228
Query: 81 DPVNNN 86
DP +NN
Sbjct: 229 DPWHNN 234
>gi|449452104|ref|XP_004143800.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
[Cucumis sativus]
gi|449525097|ref|XP_004169556.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
[Cucumis sativus]
Length = 246
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DPE E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLA
Sbjct: 169 YPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLA 228
Query: 81 DPVNNN 86
DP +NN
Sbjct: 229 DPWHNN 234
>gi|388521809|gb|AFK48966.1| unknown [Lotus japonicus]
Length = 241
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLA
Sbjct: 167 YPGGAFDPLGYSKDPKKFHEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLA 226
Query: 81 DPVNNN 86
DP +NN
Sbjct: 227 DPWHNN 232
>gi|302804514|ref|XP_002984009.1| light-harvesting complex [Selaginella moellendorffii]
gi|300148361|gb|EFJ15021.1| light-harvesting complex [Selaginella moellendorffii]
Length = 246
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 56/84 (66%), Gaps = 4/84 (4%)
Query: 4 VEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQ 63
VE RI G P E YPGG+FDPLG + DP+ F E K+KE+KNGRLA+ + GF Q
Sbjct: 155 VESRRI-GVPSAEKRK--YPGGAFDPLGFSKDPKKFEEFKLKEVKNGRLALLAFLGFCAQ 211
Query: 64 AIV-TGKGPLENLADHLADPVNNN 86
A G GPL+NLA HLADP +NN
Sbjct: 212 AAAYPGTGPLQNLATHLADPWHNN 235
>gi|413935744|gb|AFW70295.1| hypothetical protein ZEAMMB73_802965 [Zea mays]
Length = 150
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP F E K+KEIKNGRLAM + GF V Q+ G GPLENLA HLA
Sbjct: 73 YPGGAFDPLGFSKDPAKFEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLASHLA 132
Query: 81 DPVNNN 86
DP +NN
Sbjct: 133 DPWHNN 138
>gi|388506626|gb|AFK41379.1| unknown [Lotus japonicus]
Length = 147
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLA
Sbjct: 73 YPGGAFDPLGYSKDPKKFHEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLA 132
Query: 81 DPVNNN 86
DP +NN
Sbjct: 133 DPWHNN 138
>gi|357124424|ref|XP_003563900.1| PREDICTED: chlorophyll a-b binding protein 1B-21,
chloroplastic-like [Brachypodium distachyon]
Length = 247
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENL HLA
Sbjct: 169 YPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLGAHLA 228
Query: 81 DPVNNN 86
DP +NN
Sbjct: 229 DPWHNN 234
>gi|255539358|ref|XP_002510744.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223551445|gb|EEF52931.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 329
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 22 YPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
YPGG FDPL L+ D A ELKVKEIKNGRLAM + GF+ QA +TGKGP++NL +H++
Sbjct: 256 YPGGPLFDPLNLSSDAVALEELKVKEIKNGRLAMVAWLGFYAQAALTGKGPVQNLVEHIS 315
Query: 81 DPVNNN 86
DP +NN
Sbjct: 316 DPFHNN 321
>gi|223973225|gb|ACN30800.1| unknown [Zea mays]
Length = 196
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP F E K+KEIKNGRLAM + GF V Q+ G GPLENLA HLA
Sbjct: 119 YPGGAFDPLGFSKDPAKFEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLASHLA 178
Query: 81 DPVNNN 86
DP +NN
Sbjct: 179 DPWHNN 184
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 21/36 (58%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 62
FDPLGLA PE F K E+ + R AM ++ G V
Sbjct: 20 FDPLGLATVPENFERFKESEVYHCRWAMLAVPGILV 55
>gi|297820242|ref|XP_002878004.1| hypothetical protein ARALYDRAFT_485905 [Arabidopsis lyrata subsp.
lyrata]
gi|297323842|gb|EFH54263.1| hypothetical protein ARALYDRAFT_485905 [Arabidopsis lyrata subsp.
lyrata]
Length = 241
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP+ ELKVKEIKNGRLA+ + GF V Q+ G GPLENLA HLA
Sbjct: 167 YPGGAFDPLGYSKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLA 226
Query: 81 DPVNNN 86
DP +NN
Sbjct: 227 DPWHNN 232
>gi|13265501|gb|AAG40043.2|AF324692_1 AT3g54890 [Arabidopsis thaliana]
Length = 241
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP+ ELKVKEIKNGRLA+ + GF V Q+ G GPLENLA HLA
Sbjct: 167 YPGGAFDPLGYSKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLA 226
Query: 81 DPVNNN 86
DP +NN
Sbjct: 227 DPWHNN 232
>gi|15233115|ref|NP_191049.1| light-harvesting complex I chlorophyll a/b binding protein 1
[Arabidopsis thaliana]
gi|75220543|sp|Q01667.1|CAB6_ARATH RecName: Full=Chlorophyll a-b binding protein 6, chloroplastic;
AltName: Full=LHCI-730; AltName: Full=LHCII type III
CAB-6; AltName: Full=Light-harvesting complex protein
Lhca1; Flags: Precursor
gi|268612158|pdb|2WSC|1 Chain 1, Improved Model Of Plant Photosystem I
gi|268612176|pdb|2WSE|1 Chain 1, Improved Model Of Plant Photosystem I
gi|268612194|pdb|2WSF|1 Chain 1, Improved Model Of Plant Photosystem I
gi|11762180|gb|AAG40368.1|AF325016_1 AT3g54890 [Arabidopsis thaliana]
gi|11908038|gb|AAG41448.1|AF326866_1 putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|12642856|gb|AAK00370.1|AF339688_1 putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|13605732|gb|AAK32859.1|AF361847_1 AT3g54890/F28P10_130 [Arabidopsis thaliana]
gi|16207|emb|CAA39534.1| chlorophyll A/B-binding protein [Arabidopsis thaliana]
gi|166644|gb|AAA32759.1| chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|4678304|emb|CAB41095.1| chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|17979245|gb|AAL49939.1| AT3g54890/F28P10_130 [Arabidopsis thaliana]
gi|20453135|gb|AAM19809.1| AT3g54890/F28P10_130 [Arabidopsis thaliana]
gi|23507771|gb|AAN38689.1| At3g54890/F28P10_130 [Arabidopsis thaliana]
gi|332645785|gb|AEE79306.1| light-harvesting complex I chlorophyll a/b binding protein 1
[Arabidopsis thaliana]
Length = 241
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP+ ELKVKEIKNGRLA+ + GF V Q+ G GPLENLA HLA
Sbjct: 167 YPGGAFDPLGYSKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLA 226
Query: 81 DPVNNN 86
DP +NN
Sbjct: 227 DPWHNN 232
>gi|187609488|gb|ACD13267.1| chlorophyll a/b binding protein precursor [Phyllostachys
fimbriligula]
Length = 204
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP F E K+KEIKNGRLAM + GF V Q+ G GPLENLA HLA
Sbjct: 137 YPGGAFDPLGFSKDPVKFEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLASHLA 196
Query: 81 DPVNNN 86
DP +NN
Sbjct: 197 DPWHNN 202
>gi|312282193|dbj|BAJ33962.1| unnamed protein product [Thellungiella halophila]
Length = 241
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP+ F ELKVKEIKNGRLA+ + GF V Q+ G GPLENLA HLA
Sbjct: 167 YPGGAFDPLGYSKDPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLA 226
Query: 81 DPVNNN 86
DP + N
Sbjct: 227 DPWHKN 232
>gi|149242540|pdb|2O01|1 Chain 1, The Structure Of A Plant Photosystem I Supercomplex At 3.4
Angstrom Resolution
Length = 187
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP+ ELKVKEIKNGRLA+ + GF V Q+ G GPLENLA HLA
Sbjct: 119 YPGGAFDPLGYSKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLA 178
Query: 81 DPVNNN 86
DP +NN
Sbjct: 179 DPWHNN 184
>gi|7271945|gb|AAF44702.1|AF241524_1 chlorophyll a/b-binding protein type I [Asarina barclaiana]
Length = 169
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP+ F ELKVKEIKNGRLA+ + GF V Q+ G GPLENLA HLA
Sbjct: 104 YPGGAFDPLGYSKDPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLA 163
Query: 81 DPVNNN 86
DP +N
Sbjct: 164 DPWHNK 169
>gi|168007695|ref|XP_001756543.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692139|gb|EDQ78497.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 225
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGG-SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MG E RI P G DP YPGG +FDPLG + DPE AELKVKEIKNGRLAM +M G
Sbjct: 146 MGLAEYARIKFVPEG--ADPFYPGGKTFDPLGFSSDPEILAELKVKEIKNGRLAMMAMAG 203
Query: 60 FFVQAIVTGKGPLENLADHL 79
F Q VTG PL+NL D L
Sbjct: 204 LFAQGAVTGVSPLQNLHDWL 223
>gi|115467828|ref|NP_001057513.1| Os06g0320500 [Oryza sativa Japonica Group]
gi|3789954|gb|AAC67558.1| chlorophyll a/b-binding protein precursor [Oryza sativa Japonica
Group]
gi|54290899|dbj|BAD61582.1| chlorophyll a/b-binding protein precursor [Oryza sativa Japonica
Group]
gi|113595553|dbj|BAF19427.1| Os06g0320500 [Oryza sativa Japonica Group]
gi|125597037|gb|EAZ36817.1| hypothetical protein OsJ_21156 [Oryza sativa Japonica Group]
gi|215686348|dbj|BAG87609.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704347|dbj|BAG93781.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 241
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP F E K+KEIKNGRLAM + GF V Q+ G GPLENLA HL+
Sbjct: 164 YPGGAFDPLGFSKDPVKFEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLASHLS 223
Query: 81 DPVNNN 86
DP +NN
Sbjct: 224 DPWHNN 229
>gi|225449078|ref|XP_002275552.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic
isoform 1 [Vitis vinifera]
gi|147800947|emb|CAN75566.1| hypothetical protein VITISV_032585 [Vitis vinifera]
Length = 244
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLA
Sbjct: 167 YPGGAFDPLGYSKDPVKFEEYKVKEIKNGRLAILAFVGFCVQQSAYPGTGPLENLASHLA 226
Query: 81 DPVNNN 86
DP +NN
Sbjct: 227 DPWHNN 232
>gi|224109746|ref|XP_002315298.1| light-harvesting complex I protein Lhca1 [Populus trichocarpa]
gi|118489209|gb|ABK96411.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222864338|gb|EEF01469.1| light-harvesting complex I protein Lhca1 [Populus trichocarpa]
Length = 243
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV-TGKGPLENLADHLA 80
YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + G VQ G GPLENLA HLA
Sbjct: 166 YPGGAFDPLGYSKDPQKFEEYKVKEIKNGRLALLAFVGICVQQTAYPGTGPLENLATHLA 225
Query: 81 DPVNNN 86
DP +NN
Sbjct: 226 DPWHNN 231
>gi|351734432|ref|NP_001235996.1| uncharacterized protein LOC100305992 [Glycine max]
gi|255627211|gb|ACU13950.1| unknown [Glycine max]
Length = 240
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP+ F E KVKE+KNGRLA+ + GF V Q+ G GPLENLA HLA
Sbjct: 163 YPGGAFDPLGYSKDPKTFHEYKVKELKNGRLALLAFVGFCVQQSAYPGTGPLENLAAHLA 222
Query: 81 DPVNNN 86
DP +NN
Sbjct: 223 DPWHNN 228
>gi|45269111|gb|AAS56914.1| CAB-like protein [Ipomoea nil]
Length = 96
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 50/66 (75%)
Query: 24 GGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 83
G F+PLG D ++ +LK+KE+KNGRLAM ++ G+F+QA+VTG GP +NL DHLADPV
Sbjct: 26 GPIFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPV 85
Query: 84 NNNAWA 89
NNN
Sbjct: 86 NNNILT 91
>gi|357495585|ref|XP_003618081.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355519416|gb|AET01040.1| Chlorophyll a-b binding protein [Medicago truncatula]
Length = 94
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 14 LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG +P YPGG F+PLG D ++ +LK+KE+KNGRLAM ++ G+FVQA+VT GP
Sbjct: 13 LGGSGEPAYPGGPIFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQALVTRVGPY 72
Query: 73 ENLADHLADPVNNN 86
+N +HLADP NNN
Sbjct: 73 QNFLNHLADPSNNN 86
>gi|296086034|emb|CBI31475.3| unnamed protein product [Vitis vinifera]
Length = 201
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLA
Sbjct: 124 YPGGAFDPLGYSKDPVKFEEYKVKEIKNGRLAILAFVGFCVQQSAYPGTGPLENLASHLA 183
Query: 81 DPVNNN 86
DP +NN
Sbjct: 184 DPWHNN 189
>gi|116784661|gb|ABK23427.1| unknown [Picea sitchensis]
gi|116785117|gb|ABK23601.1| unknown [Picea sitchensis]
Length = 247
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT-GKGPLENLADHLA 80
YPGG+FDPLG + DP F E KVKEIKNGRLA+ + GF VQA G GPLENLA HL+
Sbjct: 169 YPGGAFDPLGFSKDPAKFKEYKVKEIKNGRLALLAFVGFCVQASANPGTGPLENLATHLS 228
Query: 81 DPVNNN 86
DP + N
Sbjct: 229 DPWHKN 234
>gi|116794024|gb|ABK26977.1| unknown [Picea sitchensis]
Length = 247
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT-GKGPLENLADHLA 80
YPGG+FDPLG + DP F E KVKEIKNGRLA+ + GF VQA G GPLENLA HL+
Sbjct: 169 YPGGAFDPLGFSKDPAKFKEYKVKEIKNGRLALLAFVGFCVQASANPGTGPLENLATHLS 228
Query: 81 DPVNNN 86
DP + N
Sbjct: 229 DPWHKN 234
>gi|116784586|gb|ABK23400.1| unknown [Picea sitchensis]
gi|148907739|gb|ABR16996.1| unknown [Picea sitchensis]
gi|224284102|gb|ACN39788.1| unknown [Picea sitchensis]
Length = 247
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT-GKGPLENLADHLA 80
YPGG+FDPLG + DP F E KVKEIKNGRLA+ + GF VQA G GPLENLA HL+
Sbjct: 169 YPGGAFDPLGFSKDPAKFEEYKVKEIKNGRLALLAFVGFCVQASANPGTGPLENLATHLS 228
Query: 81 DPVNNN 86
DP + N
Sbjct: 229 DPWHKN 234
>gi|168049224|ref|XP_001777064.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671629|gb|EDQ58178.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 224
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 14 LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG +P YPGG F+ LG + + ELKVKE+KNGRLAM ++ G+F QAI TG GP
Sbjct: 143 LGGSGNPAYPGGPIFNFLGFGKNEKELQELKVKEVKNGRLAMMAVLGYFTQAIFTGVGPF 202
Query: 73 ENLADHLADPVNNNA 87
+NL DHLADPV+NN
Sbjct: 203 QNLLDHLADPVHNNV 217
>gi|157837283|gb|ABV82714.1| chloroplast chlorophyll a/b binding protein precursor
[Phyllostachys edulis]
Length = 246
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP E K+KEIKNGRLAM + GF V Q+ G GPLENLA HLA
Sbjct: 169 YPGGAFDPLGFSKDPVKLEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLASHLA 228
Query: 81 DPVNNN 86
DP +NN
Sbjct: 229 DPWHNN 234
>gi|20788|emb|CAA41404.1| Type 1 chlorophyll a /b-binding protein [Pinus sylvestris]
Length = 246
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT-GKGPLENLADHLA 80
YPGG+FDPLG + DP F E KVKEIKNGRLA+ + GF VQA G GPLENLA HL+
Sbjct: 168 YPGGAFDPLGFSKDPVKFKEYKVKEIKNGRLALLAFVGFCVQASANPGTGPLENLATHLS 227
Query: 81 DPVNNN 86
DP + N
Sbjct: 228 DPWHRN 233
>gi|168065932|ref|XP_001784899.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663529|gb|EDQ50288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 224
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 14 LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG +P YPGG F+ LG + + ELKVKE+KNGRLAM ++ G+F QAI TG GP
Sbjct: 143 LGGSGNPAYPGGPIFNFLGFGKNEKELQELKVKEVKNGRLAMMAVLGYFTQAIFTGVGPF 202
Query: 73 ENLADHLADPVNNNA 87
+NL DHLADPV+NN
Sbjct: 203 QNLLDHLADPVHNNV 217
>gi|13676408|dbj|BAB41193.1| type III chlorophyll a/b-binding protein [Amaranthus tricolor]
Length = 156
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/64 (78%), Positives = 52/64 (81%), Gaps = 3/64 (4%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
MG VEG+RI G +GE D LYPGG FDPLGLADDP FAELKVKEIKNGRLAMFSMF
Sbjct: 94 MGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVPFAELKVKEIKNGRLAMFSMF 152
Query: 59 GFFV 62
GFFV
Sbjct: 153 GFFV 156
>gi|302854202|ref|XP_002958611.1| light-harvesting protein of photosystem I [Volvox carteri f.
nagariensis]
gi|300256072|gb|EFJ40348.1| light-harvesting protein of photosystem I [Volvox carteri f.
nagariensis]
Length = 228
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 57/95 (60%), Gaps = 9/95 (9%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
M A EG R G + +YPGG+FDPLG A D ELK+KEIKNGRLAM + GF
Sbjct: 138 MAAAEGQRNDAGGV------IYPGGAFDPLGFAKDSSKAGELKLKEIKNGRLAMVAFLGF 191
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFV 95
Q TGKGPL L +HLA+P N +ATN V
Sbjct: 192 IAQHAATGKGPLAALGEHLANPWGAN---FATNGV 223
>gi|168049170|ref|XP_001777037.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671602|gb|EDQ58151.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 242
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 14 LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG +P YPGG F+ LG + + ELKVKE+KNGRLAM ++ G+F QAI TG GP
Sbjct: 161 LGGSGNPAYPGGPIFNFLGFGKNEKELQELKVKEVKNGRLAMMAVLGYFTQAIFTGVGPF 220
Query: 73 ENLADHLADPVNNNA 87
+NL DHLADPV+NN
Sbjct: 221 QNLLDHLADPVHNNV 235
>gi|149392118|gb|ABR25925.1| chloroplast chlorophyll a-b binding protein [Oryza sativa Indica
Group]
Length = 171
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 52/70 (74%), Gaps = 2/70 (2%)
Query: 19 DPLYPGGS-FDPLGLADDPEA-FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 76
+P YPGG F+PLG EA ELK+KEIKNGRLAM + GF VQA+ TG GP++NL
Sbjct: 94 EPAYPGGPLFNPLGFGTKSEAEMKELKLKEIKNGRLAMLAFLGFSVQALFTGVGPVQNLL 153
Query: 77 DHLADPVNNN 86
DHLADPV+NN
Sbjct: 154 DHLADPVHNN 163
>gi|4139222|gb|AAD03734.1| light harvesting complex I protein precursor [Chlamydomonas
reinhardtii]
gi|40714519|dbj|BAD06923.1| light-harvesting chlorophyll-a/b protein of photosystem I
[Chlamydomonas reinhardtii]
Length = 228
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 56/93 (60%), Gaps = 9/93 (9%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
M A EG R G+ +YPGG+FDPLG A D ELK+KEIKNGRLAM + GF
Sbjct: 138 MAAAEGQR------GDAGGVVYPGGAFDPLGFAKDSSKSGELKLKEIKNGRLAMVAFLGF 191
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATN 93
Q TGKGP+ L +HLA+P N +ATN
Sbjct: 192 VAQHAATGKGPIAALGEHLANPWGAN---FATN 221
>gi|18125|emb|CAA46235.1| light harvesting complex protein I-20 [Chlamydomonas reinhardtii]
Length = 224
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 56/93 (60%), Gaps = 9/93 (9%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
M A EG R G+ +YPGG+FDPLG A D ELK+KEIKNGRLAM + GF
Sbjct: 134 MAAAEGQR------GDAGGVVYPGGAFDPLGFAKDSSKSGELKLKEIKNGRLAMVAFLGF 187
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATN 93
Q TGKGP+ L +HLA+P N +ATN
Sbjct: 188 VAQHAATGKGPIAALGEHLANPWGAN---FATN 217
>gi|255639053|gb|ACU19827.1| unknown [Glycine max]
Length = 290
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 21 LYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGGS FDPLGLA DPE A L++ EIK+ RLAM GF VQA VTGKGPL N A HL
Sbjct: 215 LYPGGSYFDPLGLASDPEKKATLQLAEIKHARLAMVGFLGFAVQAAVTGKGPLNNWATHL 274
Query: 80 ADPVNNN 86
+DP++
Sbjct: 275 SDPLHTT 281
>gi|149392115|gb|ABR25924.1| chloroplast chlorophyll a-b binding protein 8 [Oryza sativa Indica
Group]
Length = 191
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 52/70 (74%), Gaps = 2/70 (2%)
Query: 19 DPLYPGGS-FDPLGLADDPEA-FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 76
+P YPGG F+PLG EA ELK+KEIKNGRLAM + GF VQA+ TG GP++NL
Sbjct: 114 EPAYPGGPLFNPLGFGTKSEAEMKELKLKEIKNGRLAMLAFLGFSVQALFTGVGPVQNLL 173
Query: 77 DHLADPVNNN 86
DHLADPV+NN
Sbjct: 174 DHLADPVHNN 183
>gi|125555124|gb|EAZ00730.1| hypothetical protein OsI_22755 [Oryza sativa Indica Group]
Length = 241
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP F E K+KEIKNGRLAM + F V Q+ G GPLENLA HL+
Sbjct: 164 YPGGAFDPLGFSKDPVKFEEYKLKEIKNGRLAMLAFVAFCVQQSAYPGTGPLENLASHLS 223
Query: 81 DPVNNN 86
DP +NN
Sbjct: 224 DPWHNN 229
>gi|49388156|dbj|BAD25284.1| putative chlorophyll a/b-binding protein type III precursor [Oryza
sativa Japonica Group]
gi|49388341|dbj|BAD25451.1| putative chlorophyll a/b-binding protein type III precursor [Oryza
sativa Japonica Group]
gi|125538483|gb|EAY84878.1| hypothetical protein OsI_06243 [Oryza sativa Indica Group]
gi|125581168|gb|EAZ22099.1| hypothetical protein OsJ_05758 [Oryza sativa Japonica Group]
gi|215678980|dbj|BAG96410.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215679371|dbj|BAG96511.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215686386|dbj|BAG87647.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737482|dbj|BAG96612.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737505|dbj|BAG96635.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737512|dbj|BAG96642.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737560|dbj|BAG96690.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737570|dbj|BAG96700.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737580|dbj|BAG96710.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737621|dbj|BAG96751.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737634|dbj|BAG96764.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737653|dbj|BAG96783.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737729|dbj|BAG96859.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737785|dbj|BAG96915.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765646|dbj|BAG87343.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767462|dbj|BAG99690.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 269
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 52/70 (74%), Gaps = 2/70 (2%)
Query: 19 DPLYPGGS-FDPLGLADDPEA-FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 76
+P YPGG F+PLG EA ELK+KEIKNGRLAM + GF VQA+ TG GP++NL
Sbjct: 192 EPAYPGGPLFNPLGFGTKSEAEMKELKLKEIKNGRLAMLAFLGFSVQALFTGVGPVQNLL 251
Query: 77 DHLADPVNNN 86
DHLADPV+NN
Sbjct: 252 DHLADPVHNN 261
>gi|20790|emb|CAA41405.1| Type 1 chlorophyll a /b-binding protein [Pinus sylvestris]
Length = 207
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT-GKGPLENLADHLA 80
YPGG+FDPLG + DP F E KVKEIKNGRLA+ + GF VQA G GPLENLA HL+
Sbjct: 129 YPGGAFDPLGFSKDPVKFKEYKVKEIKNGRLALLAFVGFCVQASANPGTGPLENLATHLS 188
Query: 81 DPVNNN 86
DP + N
Sbjct: 189 DPWHRN 194
>gi|217071344|gb|ACJ84032.1| unknown [Medicago truncatula]
gi|388494662|gb|AFK35397.1| unknown [Medicago truncatula]
Length = 282
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV-TGKGPLENLADHLA 80
YPGG+FDPLG + DP+ F E K+KE+KNGRLA+ + G VQ G GPLENLA HLA
Sbjct: 168 YPGGAFDPLGYSKDPKKFHEYKIKEVKNGRLALLAFVGIVVQQTAYPGTGPLENLATHLA 227
Query: 81 DPVNNN 86
DP +NN
Sbjct: 228 DPWHNN 233
>gi|226530077|ref|NP_001149586.1| chlorophyll a-b binding protein 6A [Zea mays]
gi|194706946|gb|ACF87557.1| unknown [Zea mays]
gi|195628244|gb|ACG35952.1| chlorophyll a-b binding protein 6A [Zea mays]
gi|413926425|gb|AFW66357.1| chlorophyll a-b binding protein 6A [Zea mays]
Length = 249
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP E K+KEIKNGRLAM + GF V Q+ G GPLENLA HLA
Sbjct: 172 YPGGAFDPLGFSRDPAKLEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLAAHLA 231
Query: 81 DPVNNN 86
DP +NN
Sbjct: 232 DPWHNN 237
>gi|145079846|tpg|DAA05942.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca4 [Micromonas sp. CCMP490]
Length = 250
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Query: 18 TDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
TD YP G FDP+G+A DPE LKVKEI NGRLAM ++ G +Q TG GP+ NL
Sbjct: 172 TDVGYPKGLFDPMGMAKDPEKVKVLKVKEIANGRLAMVAVMGCIIQNEATGVGPIANLKA 231
Query: 78 HLADPVNNNAWAYATNFVP 96
HLADP +N + TNFVP
Sbjct: 232 HLADPAHNTIF---TNFVP 247
>gi|117661756|gb|ABK55666.1| chloroplast chlorophyll a/b-binding protein [Cucumis sativus]
Length = 137
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/43 (95%), Positives = 42/43 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELK 43
MGAVEGYRIAGGPLGEVT P+YPGGSFDPLGLADDPEAFAELK
Sbjct: 95 MGAVEGYRIAGGPLGEVTVPIYPGGSFDPLGLADDPEAFAELK 137
>gi|255585090|ref|XP_002533251.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223526931|gb|EEF29136.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 244
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP F E KVKEIKNGRLA+ + G V Q+ G GPLENLA HLA
Sbjct: 167 YPGGAFDPLGYSKDPAKFHEYKVKEIKNGRLALLAFVGICVQQSAYPGTGPLENLATHLA 226
Query: 81 DPVNNN 86
DP +NN
Sbjct: 227 DPWHNN 232
>gi|357139429|ref|XP_003571284.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like
[Brachypodium distachyon]
Length = 115
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 14 LGEVTDPLYPGGS-FDPLGLADDPEA-FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 71
LG DP YPGG F+PLG + AELK+KEIKNGRLAM + G +QAI TG GP
Sbjct: 33 LGGSGDPAYPGGPIFNPLGFGTKSDKELAELKLKEIKNGRLAMLAFLGMSIQAIFTGVGP 92
Query: 72 LENLADHLADPVNNN 86
+NL DHL+DPVNNN
Sbjct: 93 FQNLLDHLSDPVNNN 107
>gi|424512849|emb|CCO66433.1| predicted protein [Bathycoccus prasinos]
Length = 286
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 59/82 (71%), Gaps = 7/82 (8%)
Query: 14 LGEVTDPLYPGGSFDPLGLA-DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
+G +P YPGGSF+P+G+ +D +A +KVKEIKNGRLAM + FG VQAI+TG+GP+
Sbjct: 202 MGGTGNPAYPGGSFNPMGMGKNDMDA---MKVKEIKNGRLAMMAFFGIMVQAIITGEGPV 258
Query: 73 ENLADHLADPVNNNAWAYATNF 94
+NL DH+ DP +N TNF
Sbjct: 259 KNLTDHVTDPFAHN---LLTNF 277
>gi|255085312|ref|XP_002505087.1| chlorophyll a/b-binding protein, psi-associated, chloroplast
precursor [Micromonas sp. RCC299]
gi|226520356|gb|ACO66345.1| chlorophyll a/b-binding protein, psi-associated, chloroplast
precursor [Micromonas sp. RCC299]
Length = 242
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 49/69 (71%)
Query: 18 TDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
TD YP G FDP+G A DP+ ELK KEI NGRLAM ++ G F QAI TG GP++NL
Sbjct: 171 TDVGYPKGLFDPMGYAKDPKKAEELKRKEIANGRLAMVAIVGCFAQAISTGTGPVDNLFT 230
Query: 78 HLADPVNNN 86
HLADP +NN
Sbjct: 231 HLADPGHNN 239
>gi|255574383|ref|XP_002528105.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223532494|gb|EEF34284.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 285
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 21 LYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGG F DPLGLA+DPE A L++ EIK+ RLAM + GF VQA VTGKGPL N A HL
Sbjct: 212 LYPGGKFFDPLGLAEDPEKKATLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHL 271
Query: 80 ADPVNNN 86
+DP++
Sbjct: 272 SDPLHTT 278
>gi|398313939|emb|CCI55396.1| PSI antenna protein Lhca1 [Marchantia polymorpha]
Length = 243
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV-TGKGPLENLADHLA 80
YPGG FDPLG A DP+ E K+KE+KNGRLA+ + GF VQAI G GPLENLA HL+
Sbjct: 167 YPGGPFDPLGFAKDPKKLEEYKLKELKNGRLALLAFLGFSVQAIAYPGTGPLENLASHLS 226
Query: 81 DPVNNN 86
+P NN
Sbjct: 227 NPWANN 232
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 62
FDPLGLA+ PE FA K E+ + R AM ++ G +
Sbjct: 68 FDPLGLAEVPENFARYKESELIHCRWAMLAVPGVLI 103
>gi|159476206|ref|XP_001696202.1| light-harvesting protein of photosystem I [Chlamydomonas
reinhardtii]
gi|40714515|dbj|BAD06921.1| light-harvesting chlorophyll-a/b protein of photosystem I
[Chlamydomonas reinhardtii]
gi|158282427|gb|EDP08179.1| light-harvesting protein of photosystem I [Chlamydomonas
reinhardtii]
Length = 243
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 52/74 (70%), Gaps = 3/74 (4%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD 81
YPGG FDPLGL+ + + +A+ K+KE+KNGRLAM + GF Q TG GP++NLA HL D
Sbjct: 168 YPGGPFDPLGLSKEADKWADWKLKEVKNGRLAMLAFLGFVAQKYATGAGPVDNLAAHLKD 227
Query: 82 PVNNNAWAYATNFV 95
P + N YATN V
Sbjct: 228 PWHVN---YATNGV 238
>gi|357137970|ref|XP_003570571.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
[Brachypodium distachyon]
Length = 259
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 16 EVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 74
E P YPGG F+P+GLA D + E+K+KEIKNGRLAM +M GFFVQA VT GP++N
Sbjct: 180 EGLQPGYPGGPLFNPMGLAKDIKNAHEVKLKEIKNGRLAMVAMLGFFVQASVTHVGPIDN 239
Query: 75 LADHLADPVNNN 86
L HL+DP NNN
Sbjct: 240 LLIHLSDPFNNN 251
>gi|118486699|gb|ABK95186.1| unknown [Populus trichocarpa]
Length = 142
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 21 LYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGG+F DPLGLA DPE A L++ EIK+ RLAM + GF VQA VTGKGPL N A HL
Sbjct: 69 LYPGGNFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAWVTGKGPLNNWATHL 128
Query: 80 ADPVNNN 86
+DP++
Sbjct: 129 SDPLHTT 135
>gi|449460307|ref|XP_004147887.1| PREDICTED: chlorophyll a-b binding protein CP29.2,
chloroplastic-like [Cucumis sativus]
gi|449516143|ref|XP_004165107.1| PREDICTED: chlorophyll a-b binding protein CP29.2,
chloroplastic-like [Cucumis sativus]
Length = 284
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 21 LYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGG F DPLGLA+DPE A L++ EIK+ RLAM + GF VQA VTGKGPL N A HL
Sbjct: 211 LYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHL 270
Query: 80 ADPVNNN 86
+DP++
Sbjct: 271 SDPLHTT 277
>gi|384253051|gb|EIE26526.1| hypothetical protein COCSUDRAFT_52367 [Coccomyxa subellipsoidea
C-169]
Length = 246
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 2/68 (2%)
Query: 19 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 78
+P YPGG FDPLG + AELK+KEIKN RLAM ++ GFFVQA TGK PL++L+ H
Sbjct: 170 EPGYPGGIFDPLGYSKG--NMAELKLKEIKNARLAMLAVLGFFVQAKTTGKTPLDSLSSH 227
Query: 79 LADPVNNN 86
LADP +NN
Sbjct: 228 LADPWSNN 235
>gi|406362893|gb|AFS34654.1| chloroplast chlorophyll a-b binding protein, partial [Leymus
secalinus]
Length = 189
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 14 LGEVTDPLYPGGS-FDPLGLADDPEA-FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 71
LG DP YPGG F+PLG E ELK+KEIKNGRLAM + G +QAI TG GP
Sbjct: 107 LGGSGDPAYPGGPIFNPLGFGTKSEKEMKELKLKEIKNGRLAMLAFLGMSLQAIFTGVGP 166
Query: 72 LENLADHLADPVNNN 86
+NL DHL+DPVNNN
Sbjct: 167 FQNLLDHLSDPVNNN 181
>gi|312281599|dbj|BAJ33665.1| unnamed protein product [Thellungiella halophila]
Length = 288
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 21 LYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGG F DPLGLA DPE A+L++ EIK+ RLAM + GF VQA TGKGPL N A HL
Sbjct: 213 LYPGGKFFDPLGLASDPEKTAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHL 272
Query: 80 ADPVNNN 86
+DP++
Sbjct: 273 SDPLHTT 279
>gi|225690794|gb|ACO06083.1| chlorophyll a-b binding protein [Triticum aestivum]
Length = 252
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP F ELK+KEIKNGRLAM + GF V Q+ G GPLEN HLA
Sbjct: 169 YPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENPGTHLA 228
Query: 81 DPVNNNA 87
DP +N +
Sbjct: 229 DPWHNTS 235
>gi|322812534|pdb|3PL9|A Chain A, Crystal Structure Of Spinach Minor Light-Harvesting
Complex Cp29 At 2.80 Angstrom Resolution
Length = 243
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 47/66 (71%)
Query: 21 LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
LYPGG+FDPLGLA DPE L++ EIK+ RLAM GF VQA VTGKGPL N HL+
Sbjct: 172 LYPGGTFDPLGLASDPEKKPILQLAEIKHARLAMVGFLGFAVQAAVTGKGPLNNWVTHLS 231
Query: 81 DPVNNN 86
DP++
Sbjct: 232 DPLHTT 237
>gi|326510901|dbj|BAJ91798.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 269
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 14 LGEVTDPLYPGGS-FDPLGLADDPEA-FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 71
LG DP YPGG F+PLG E ELK+KEIKNGRLAM + G +QAI TG GP
Sbjct: 187 LGGSGDPAYPGGPIFNPLGFGTKSEKEMKELKLKEIKNGRLAMLAFLGMSLQAIFTGVGP 246
Query: 72 LENLADHLADPVNNN 86
+NL DHL+DPVNNN
Sbjct: 247 FQNLLDHLSDPVNNN 261
>gi|187609486|gb|ACD13266.1| chlorophyll a/b binding protein precursor [Phyllostachys
iridescens]
Length = 205
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP E K+KEI+NGRLAM + GF V Q+ G GPLENLA HLA
Sbjct: 138 YPGGAFDPLGFSKDPVKLEEYKLKEIRNGRLAMLAFVGFCVQQSPYPGTGPLENLASHLA 197
Query: 81 DPVNNN 86
DP +NN
Sbjct: 198 DPWHNN 203
>gi|159486759|ref|XP_001701405.1| light-harvesting chlorophyll-a/b protein of photosystem I, type III
[Chlamydomonas reinhardtii]
gi|158271707|gb|EDO97521.1| light-harvesting chlorophyll-a/b protein of photosystem I, type III
[Chlamydomonas reinhardtii]
Length = 298
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 52/77 (67%), Gaps = 4/77 (5%)
Query: 19 DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
D YPGG F + L A ELK+KEIKNGRLAM +M G+ QA++TGKGP +NL +
Sbjct: 189 DAAYPGGPFFNLFNLGKTEAAMKELKLKEIKNGRLAMLAMLGYGAQAVMTGKGPFQNLVE 248
Query: 78 HLADPVNNNAWAYATNF 94
HLADPVNNN TNF
Sbjct: 249 HLADPVNNN---ILTNF 262
>gi|380447755|gb|AFD54060.1| morphogenesis protein [Leymus secalinus]
Length = 268
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 14 LGEVTDPLYPGGS-FDPLGLADDPEA-FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 71
LG DP YPGG F+PLG E ELK+KEIKNGRLAM + G +QAI TG GP
Sbjct: 186 LGGSGDPAYPGGPIFNPLGFGTKSEKEMKELKLKEIKNGRLAMLAFLGMSLQAIFTGVGP 245
Query: 72 LENLADHLADPVNNN 86
+NL DHL+DPVNNN
Sbjct: 246 FQNLLDHLSDPVNNN 260
>gi|326514018|dbj|BAJ92159.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 269
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 14 LGEVTDPLYPGGS-FDPLGLADDPEA-FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 71
LG DP YPGG F+PLG E ELK+KEIKNGRLAM + G +QAI TG GP
Sbjct: 187 LGGSGDPAYPGGPIFNPLGFGTKSEKEMKELKLKEIKNGRLAMLAFLGMSLQAIFTGVGP 246
Query: 72 LENLADHLADPVNNN 86
+NL DHL+DPVNNN
Sbjct: 247 FQNLLDHLSDPVNNN 261
>gi|224090986|ref|XP_002309134.1| light-harvesting complex II protein Lhcb4 [Populus trichocarpa]
gi|118489077|gb|ABK96345.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222855110|gb|EEE92657.1| light-harvesting complex II protein Lhcb4 [Populus trichocarpa]
Length = 285
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 21 LYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGG F DPLGLA DPE A L++ EIK+ RLAM + GF VQA VTGKGPL N A HL
Sbjct: 212 LYPGGQFFDPLGLASDPEKKATLQLAEIKHARLAMVAFLGFAVQAWVTGKGPLNNWATHL 271
Query: 80 ADPVNNN 86
+DP++
Sbjct: 272 SDPLHTT 278
>gi|4689382|gb|AAD27878.1|AF139466_1 chlorophyll a/b binding protein CP29 [Vigna radiata]
Length = 290
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 21 LYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGGS FDPLGLA DPE A L++ EIK+ RLAM GF VQA TGKGPL N A HL
Sbjct: 215 LYPGGSYFDPLGLASDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHL 274
Query: 80 ADPVNNN 86
+DP++
Sbjct: 275 SDPLHTT 281
>gi|356503628|ref|XP_003520609.1| PREDICTED: chlorophyll a-b binding protein CP29.2,
chloroplastic-like [Glycine max]
Length = 290
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 21 LYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGGS FDPLGLA DPE A L++ EIK+ RLAM GF VQA TGKGPL N A HL
Sbjct: 215 LYPGGSYFDPLGLASDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHL 274
Query: 80 ADPVNNN 86
+DP++
Sbjct: 275 SDPLHTT 281
>gi|40714511|dbj|BAD06919.1| light-harvesting chlorophyll-a/b protein of photosystem I (Type
III) [Chlamydomonas reinhardtii]
Length = 267
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 52/77 (67%), Gaps = 4/77 (5%)
Query: 19 DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
D YPGG F + L A ELK+KEIKNGRLAM +M G+ QA++TGKGP +NL +
Sbjct: 189 DAAYPGGPFFNLFNLGKTEAAMKELKLKEIKNGRLAMLAMLGYGAQAVMTGKGPFQNLVE 248
Query: 78 HLADPVNNNAWAYATNF 94
HLADPVNNN TNF
Sbjct: 249 HLADPVNNN---ILTNF 262
>gi|356496185|ref|XP_003516950.1| PREDICTED: chlorophyll a-b binding protein CP29.2,
chloroplastic-like [Glycine max]
Length = 290
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 21 LYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGGS FDPLGLA DPE A L++ EIK+ RLAM GF VQA TGKGPL N A HL
Sbjct: 215 LYPGGSYFDPLGLASDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHL 274
Query: 80 ADPVNNN 86
+DP++
Sbjct: 275 SDPLHTT 281
>gi|20260162|gb|AAM12979.1| chlorophyll a/b-binding protein CP29 [Arabidopsis thaliana]
Length = 290
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 21 LYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGG F DPLGLA DPE A+L++ EIK+ RLAM + GF VQA TGKGPL N A HL
Sbjct: 216 LYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHL 275
Query: 80 ADPVNNN 86
+DP++
Sbjct: 276 SDPLHTT 282
>gi|297810243|ref|XP_002873005.1| chlorophyll a/b-binding protein CP29 [Arabidopsis lyrata subsp.
lyrata]
gi|297318842|gb|EFH49264.1| chlorophyll a/b-binding protein CP29 [Arabidopsis lyrata subsp.
lyrata]
Length = 291
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 21 LYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGG FDPLGLA DPE A+L++ EIK+ RLAM + GF VQA TGKGPL N A HL
Sbjct: 217 LYPGGKYFDPLGLAADPEKRAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHL 276
Query: 80 ADPVNNN 86
+DP++
Sbjct: 277 SDPLHTT 283
>gi|15241005|ref|NP_195773.1| chlorophyll a-b binding protein CP29.1 [Arabidopsis thaliana]
gi|38502901|sp|Q07473.1|CB4A_ARATH RecName: Full=Chlorophyll a-b binding protein CP29.1,
chloroplastic; AltName: Full=LHCB4.1; AltName:
Full=LHCII protein 4.1; Flags: Precursor
gi|298036|emb|CAA50712.1| CP29 [Arabidopsis thaliana]
gi|7327812|emb|CAB82269.1| chlorophyll a/b-binding protein CP29 [Arabidopsis thaliana]
gi|15081815|gb|AAK82562.1| AT5g01530/F7A7_50 [Arabidopsis thaliana]
gi|16323075|gb|AAL15272.1| AT5g01530/F7A7_50 [Arabidopsis thaliana]
gi|16648983|gb|AAL24343.1| chlorophyll a/b-binding protein CP29 [Arabidopsis thaliana]
gi|20148703|gb|AAM10242.1| chlorophyll a/b-binding protein CP29 [Arabidopsis thaliana]
gi|22137102|gb|AAM91396.1| At5g01530/F7A7_50 [Arabidopsis thaliana]
gi|110741014|dbj|BAE98601.1| Lhcb4- protein [Arabidopsis thaliana]
gi|332002974|gb|AED90357.1| chlorophyll a-b binding protein CP29.1 [Arabidopsis thaliana]
Length = 290
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 21 LYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGG F DPLGLA DPE A+L++ EIK+ RLAM + GF VQA TGKGPL N A HL
Sbjct: 216 LYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHL 275
Query: 80 ADPVNNN 86
+DP++
Sbjct: 276 SDPLHTT 282
>gi|224140409|ref|XP_002323575.1| predicted protein [Populus trichocarpa]
gi|222868205|gb|EEF05336.1| predicted protein [Populus trichocarpa]
Length = 283
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 21 LYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGG+F DPLGLA DPE A L++ EIK+ RLAM + GF VQA VTGKGPL N A HL
Sbjct: 210 LYPGGNFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAWVTGKGPLNNWATHL 269
Query: 80 ADPVNNN 86
+DP++
Sbjct: 270 SDPLHTT 276
>gi|302807871|ref|XP_002985629.1| light-harvesting complex [Selaginella moellendorffii]
gi|300146538|gb|EFJ13207.1| light-harvesting complex [Selaginella moellendorffii]
Length = 299
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 21 LYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGGS FDPLGLA DPE LK+ EIK+ RLAM + FGF VQA TGKGPL+N HL
Sbjct: 226 LYPGGSYFDPLGLAADPERKEVLKLAEIKHARLAMVAAFGFAVQAAATGKGPLDNWVTHL 285
Query: 80 ADPVNNN 86
+DP++
Sbjct: 286 SDPLHTT 292
>gi|118489398|gb|ABK96503.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 283
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 21 LYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGG+F DPLGLA DPE A L++ EIK+ RLAM + GF VQA VTGKGPL N A HL
Sbjct: 210 LYPGGNFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAWVTGKGPLNNWATHL 269
Query: 80 ADPVNNN 86
+DP++
Sbjct: 270 SDPLHTT 276
>gi|87313215|gb|ABD37904.1| light-harvesting chlorophyll-a/b binding protein Lhca2
[Chlamydomonas incerta]
Length = 254
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 52/77 (67%), Gaps = 4/77 (5%)
Query: 19 DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
D YPGG F + L A ELK+KEIKNGRLAM +M G+ QA++TGKGP +NL +
Sbjct: 176 DAAYPGGPFFNLFNLGKTEAAMKELKLKEIKNGRLAMLAMLGYGAQAVLTGKGPFQNLVE 235
Query: 78 HLADPVNNNAWAYATNF 94
HLADPVNNN TNF
Sbjct: 236 HLADPVNNN---ILTNF 249
>gi|302784975|ref|XP_002974259.1| light-harvesting complex [Selaginella moellendorffii]
gi|300157857|gb|EFJ24481.1| light-harvesting complex [Selaginella moellendorffii]
Length = 299
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 21 LYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGGS FDPLGLA DPE LK+ EIK+ RLAM + FGF VQA TGKGPL+N HL
Sbjct: 226 LYPGGSYFDPLGLAADPERKEVLKLAEIKHARLAMVAAFGFAVQAAATGKGPLDNWVTHL 285
Query: 80 ADPVNNN 86
+DP++
Sbjct: 286 SDPLHTT 292
>gi|110377766|gb|ABG73415.1| chloroplast pigment-binding protein CP29 [Nicotiana tabacum]
Length = 285
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 21 LYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGGSF DPLGLA DPE A L++ EIK+ RLAM + GF VQA TGKGPL N A HL
Sbjct: 210 LYPGGSFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHL 269
Query: 80 ADPVNNN 86
+DP++
Sbjct: 270 SDPLHTT 276
>gi|159483767|ref|XP_001699932.1| chlorophyll a-b binding protein [Chlamydomonas reinhardtii]
gi|158281874|gb|EDP07628.1| chlorophyll a-b binding protein [Chlamydomonas reinhardtii]
Length = 399
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 19 DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
D YPGG FDPL A D + F E VKE+KNGRLAM +M GFFVQA VT GP++N+ D
Sbjct: 321 DQNYPGGGPFDPLNYAADADGFVEQAVKEVKNGRLAMLAMLGFFVQAAVTRVGPVQNVLD 380
Query: 78 HLADPVNNN 86
+ADP +NN
Sbjct: 381 FVADPAHNN 389
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 70
FDPLGL+ + +FA+ + E+ + R AM + G V ++ +G
Sbjct: 205 FDPLGLSKEQASFAKYQEAELLHARWAMLGVVGCLVPELLALRG 248
>gi|125600703|gb|EAZ40279.1| hypothetical protein OsJ_24721 [Oryza sativa Japonica Group]
Length = 267
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 21 LYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGGS FDPLGLA DPE L++ EIK+ RLAM + GF VQA TGKGPL N A HL
Sbjct: 192 LYPGGSYFDPLGLASDPEKKERLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHL 251
Query: 80 ADPVNNN 86
+DP++
Sbjct: 252 SDPLHTT 258
>gi|303324978|pdb|3LW5|1 Chain 1, Improved Model Of Plant Photosystem I
Length = 170
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLA 80
YPGG+FDPLG + DP+ ELKVKEIKNGRLA+ + GF V Q+ G GPLENLA HLA
Sbjct: 107 YPGGAFDPLGYSKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLA 166
Query: 81 DPVN 84
DP +
Sbjct: 167 DPWH 170
>gi|326532160|dbj|BAK01456.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 78
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 19 DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
P YPGG F+P+GLA D E E+K+KEIKNGRLAM +M GF VQA VT GP++NL
Sbjct: 2 QPGYPGGPLFNPMGLAKDIENANEVKLKEIKNGRLAMVAMLGFIVQASVTHAGPIDNLLT 61
Query: 78 HLADPVNNNAWAYAT 92
HL+DP N N T
Sbjct: 62 HLSDPFNKNIIHALT 76
>gi|326496799|dbj|BAJ98426.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509469|dbj|BAJ91651.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509647|dbj|BAJ87039.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 257
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 16 EVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 74
E P YPGG F+P+GLA D E E+K+KEIKNGRLAM +M GF VQA VT GP++N
Sbjct: 178 EGLQPGYPGGPLFNPMGLAKDIENANEVKLKEIKNGRLAMVAMLGFIVQASVTHAGPIDN 237
Query: 75 LADHLADPVNNN 86
L HL+DP N N
Sbjct: 238 LLTHLSDPFNKN 249
>gi|87313219|gb|ABD37906.1| light-harvesting chlorophyll-a/b binding protein Lhca4
[Chlamydomonas incerta]
Length = 237
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 51/74 (68%), Gaps = 3/74 (4%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD 81
YPGG FDPLGL+ + + +A+ K+KE+KNGRLAM + GF Q TG GP++NL HL D
Sbjct: 162 YPGGPFDPLGLSKEADKWADWKLKEVKNGRLAMLAFLGFVAQKYATGAGPVDNLVAHLKD 221
Query: 82 PVNNNAWAYATNFV 95
P + N YATN V
Sbjct: 222 PWHVN---YATNGV 232
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
FDPLGL DP A A + E+ + R AM + G + ++T G L
Sbjct: 48 FDPLGLGKDPVALAWYQQAELIHCRTAMTGVAGILIPGLLTKAGAL 93
>gi|87313223|gb|ABD37908.1| light-harvesting chlorophyll-a/b binding protein Lhca6
[Chlamydomonas incerta]
Length = 192
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 56/93 (60%), Gaps = 9/93 (9%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
M A EG R G+ +YPGG+FDPLG A D ELK+KE+KNGRLAM + GF
Sbjct: 102 MAAAEGQR------GDAGGVVYPGGAFDPLGFAKDASKSGELKLKEVKNGRLAMVAFLGF 155
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATN 93
Q TGKGP+ L +HL++P N +ATN
Sbjct: 156 VAQHAATGKGPIAALGEHLSNPWGAN---FATN 185
>gi|357468737|ref|XP_003604653.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355505708|gb|AES86850.1| Chlorophyll a-b binding protein [Medicago truncatula]
Length = 347
Score = 82.8 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/65 (63%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 21 LYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGG F DPLGLA DPE A L++ EIK+ RLAM + GF VQA TGKGPL N A HL
Sbjct: 273 LYPGGKFFDPLGLASDPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHL 332
Query: 80 ADPVN 84
+DP++
Sbjct: 333 SDPLH 337
>gi|297829418|ref|XP_002882591.1| LHCB4.2 [Arabidopsis lyrata subsp. lyrata]
gi|297328431|gb|EFH58850.1| LHCB4.2 [Arabidopsis lyrata subsp. lyrata]
Length = 287
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 21 LYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGG F DPLGLA DPE A+L++ EIK+ RLAM GF VQA TGKGPL N A HL
Sbjct: 213 LYPGGKFFDPLGLASDPEKKAQLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHL 272
Query: 80 ADPVNNN 86
+DP++
Sbjct: 273 SDPLHTT 279
>gi|115448873|ref|NP_001048216.1| Os02g0764500 [Oryza sativa Japonica Group]
gi|46805727|dbj|BAD17114.1| putative light-harvesting chlorophyll-a/b protein of photosystem I
[Oryza sativa Japonica Group]
gi|113537747|dbj|BAF10130.1| Os02g0764500 [Oryza sativa Japonica Group]
gi|215694704|dbj|BAG89895.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623725|gb|EEE57857.1| hypothetical protein OsJ_08493 [Oryza sativa Japonica Group]
Length = 261
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 18 TDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 76
+ P YPGG F+PLGLA D E E K+KEIKNGRLAM +M GF VQA VT GP++NL
Sbjct: 184 SQPGYPGGPLFNPLGLAKDIENADEAKLKEIKNGRLAMVAMLGFIVQASVTHVGPIDNLL 243
Query: 77 DHLADPVNNN 86
HL+DP N N
Sbjct: 244 THLSDPFNKN 253
>gi|346987811|gb|AEO51756.1| chloroplast chlorophyll A/B binding protein [Dimocarpus longan]
Length = 286
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 21 LYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGG F DPLGLA DPE A L++ EIK+ RLAM GF VQA VTGKGPL N A HL
Sbjct: 213 LYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVGFLGFAVQAAVTGKGPLNNWATHL 272
Query: 80 ADPVNNN 86
+DP++
Sbjct: 273 SDPLHTT 279
>gi|218191630|gb|EEC74057.1| hypothetical protein OsI_09055 [Oryza sativa Indica Group]
Length = 261
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 18 TDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 76
+ P YPGG F+PLGLA D E E K+KEIKNGRLAM +M GF VQA VT GP++NL
Sbjct: 184 SQPGYPGGPLFNPLGLAKDIENADEAKLKEIKNGRLAMVAMLGFIVQASVTHVGPIDNLL 243
Query: 77 DHLADPVNNN 86
HL+DP N N
Sbjct: 244 THLSDPFNKN 253
>gi|217072728|gb|ACJ84724.1| unknown [Medicago truncatula]
gi|388501002|gb|AFK38567.1| unknown [Medicago truncatula]
Length = 289
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 21 LYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGG F DPLGLA DPE A L++ EIK+ RLAM + GF VQA TGKGPL N A HL
Sbjct: 215 LYPGGKFFDPLGLASDPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHL 274
Query: 80 ADPVNNN 86
+DP++
Sbjct: 275 SDPLHTT 281
>gi|115472753|ref|NP_001059975.1| Os07g0558400 [Oryza sativa Japonica Group]
gi|3075488|gb|AAC14566.1| chlorophyll a/b-binding protein [Oryza sativa Japonica Group]
gi|34394009|dbj|BAC84033.1| chlorophyll a/b-binding protein [Oryza sativa Japonica Group]
gi|113611511|dbj|BAF21889.1| Os07g0558400 [Oryza sativa Japonica Group]
gi|125558786|gb|EAZ04322.1| hypothetical protein OsI_26463 [Oryza sativa Indica Group]
gi|215704418|dbj|BAG93852.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737393|dbj|BAG96322.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737709|dbj|BAG96839.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215764955|dbj|BAG86652.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767447|dbj|BAG99675.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 290
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 21 LYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGGS FDPLGLA DPE L++ EIK+ RLAM + GF VQA TGKGPL N A HL
Sbjct: 215 LYPGGSYFDPLGLASDPEKKERLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHL 274
Query: 80 ADPVNNN 86
+DP++
Sbjct: 275 SDPLHTT 281
>gi|242066618|ref|XP_002454598.1| hypothetical protein SORBIDRAFT_04g034130 [Sorghum bicolor]
gi|241934429|gb|EES07574.1| hypothetical protein SORBIDRAFT_04g034130 [Sorghum bicolor]
Length = 266
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 19 DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
P YPGG F+PLGLA D E E K+KEIKNGRLAM +M GF VQA VT GP++NL
Sbjct: 190 QPGYPGGPLFNPLGLAKDIENAHEEKLKEIKNGRLAMVAMLGFMVQASVTHAGPIDNLLT 249
Query: 78 HLADPVNNN 86
HL+DP N N
Sbjct: 250 HLSDPFNKN 258
>gi|118489770|gb|ABK96685.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 302
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 52/71 (73%), Gaps = 2/71 (2%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+G E +RI G LG D L+PGG FDPLGLA DP+ A LKVKEIKNGRLAMF+M GF
Sbjct: 192 VGGAEYFRITNG-LG-FDDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAMLGF 249
Query: 61 FVQAIVTGKGP 71
F+QA VTG P
Sbjct: 250 FLQAYVTGDVP 260
>gi|295798043|emb|CBL86548.1| chlorophyll a/b binding protein [Olea europaea]
Length = 179
Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 22 YPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
YPGGSF DPLGLA DPE A L++ EIK+ RLAM + GF VQA TGKGPL N A HL+
Sbjct: 105 YPGGSFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLS 164
Query: 81 DPVNNN 86
DP++
Sbjct: 165 DPLHTT 170
>gi|384247026|gb|EIE20514.1| light harvesting complex protein I-20 [Coccomyxa subellipsoidea
C-169]
Length = 229
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 57/98 (58%), Gaps = 8/98 (8%)
Query: 3 AVEGYRIAGGPLGEVTDP-----LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 57
A+E IAG +P YPGG+FDPLG + D + E K+KE+KNGRLAM +
Sbjct: 129 AIEFVAIAGAEAQRNAEPDAEKRKYPGGAFDPLGFSKDSKVLEENKLKELKNGRLAMLAF 188
Query: 58 FGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFV 95
GF Q TGKGPLE L HLADP N +ATN V
Sbjct: 189 VGFIAQHAATGKGPLEALKLHLADPWGAN---FATNGV 223
>gi|226358411|gb|ACO51068.1| chloroplast chlorophyll A-B binding protein [Gossypium hirsutum]
Length = 285
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 21 LYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGG FDPLGLA DPE A L++ EIK+ RLAM + GF VQA TGKGPL N A HL
Sbjct: 212 LYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHL 271
Query: 80 ADPVNNN 86
+DP++
Sbjct: 272 SDPLHTT 278
>gi|384247027|gb|EIE20515.1| light harvesting complex a protein [Coccomyxa subellipsoidea C-169]
Length = 255
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD 81
YPGG FDPLGL+ P + +K++EIKNGRLAM + GF Q + TGKGP+ENL DHL++
Sbjct: 171 YPGGVFDPLGLSKGP-GYEAMKLREIKNGRLAMLAFIGFASQYLATGKGPIENLLDHLSN 229
Query: 82 PVNNN 86
P+ NN
Sbjct: 230 PLANN 234
>gi|225440674|ref|XP_002279834.1| PREDICTED: chlorophyll a-b binding protein CP29.2, chloroplastic
[Vitis vinifera]
gi|147784938|emb|CAN77492.1| hypothetical protein VITISV_010727 [Vitis vinifera]
Length = 288
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 21 LYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGG F DPLGLA DPE A L++ EIK+ RLAM GF VQA VTGKGPL N A HL
Sbjct: 214 LYPGGKFFDPLGLAADPEKKAVLQLAEIKHARLAMIGFLGFAVQAAVTGKGPLNNWATHL 273
Query: 80 ADPVNNN 86
+DP++
Sbjct: 274 SDPLHTT 280
>gi|302851012|ref|XP_002957031.1| light-harvesting chlorophyll-a/b protein of photosystem I [Volvox
carteri f. nagariensis]
gi|300257587|gb|EFJ41833.1| light-harvesting chlorophyll-a/b protein of photosystem I [Volvox
carteri f. nagariensis]
Length = 270
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 51/77 (66%), Gaps = 4/77 (5%)
Query: 19 DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
DP YPGG F + L A ELK+KEIKNGRLAM +M G+ QA +T +GP +NL D
Sbjct: 190 DPAYPGGPFFNLFNLGKTEAAMKELKLKEIKNGRLAMLAMLGYGAQATLTREGPFQNLLD 249
Query: 78 HLADPVNNNAWAYATNF 94
HLADPVNNN TNF
Sbjct: 250 HLADPVNNN---ILTNF 263
>gi|89574390|gb|ABD77412.1| chloroplast chlorophyll a/b-binding protein [Zingiber officinale]
Length = 130
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/41 (92%), Positives = 40/41 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAE 41
MGAVEGYR+AGGPLGEV DPLYPGGSF+PLGLADDPEAFAE
Sbjct: 78 MGAVEGYRVAGGPLGEVVDPLYPGGSFEPLGLADDPEAFAE 118
>gi|162458005|ref|NP_001105502.1| photosystem II subunit29 [Zea mays]
gi|2326947|emb|CAA90681.1| Chlorophyll a/b-binding protein CP29 precursor [Zea mays]
gi|195639374|gb|ACG39155.1| hypothetical protein [Zea mays]
gi|414887094|tpg|DAA63108.1| TPA: chlorophyll a/b-binding protein CP29 Precursor isoform 1 [Zea
mays]
gi|414887095|tpg|DAA63109.1| TPA: chlorophyll a/b-binding protein CP29 Precursor isoform 2 [Zea
mays]
Length = 291
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 21 LYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGGS FDPLGLA DPE L++ EIK+ RLAM + GF VQA TGKGPL N A HL
Sbjct: 216 LYPGGSYFDPLGLAADPEKKERLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHL 275
Query: 80 ADPVNNN 86
+DP++
Sbjct: 276 SDPLHTT 282
>gi|168057356|ref|XP_001780681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667846|gb|EDQ54465.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 208
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 22 YPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
YPGG F+PLG A+DP L+ KEIKNGRLAM +M GF VQA VT GP+ENL HL+
Sbjct: 136 YPGGPLFNPLGFANDPTKPQPLRWKEIKNGRLAMVAMVGFMVQAYVTKTGPIENLLTHLS 195
Query: 81 DPVNNN 86
DPV+N
Sbjct: 196 DPVHNT 201
>gi|3153151|emb|CAA06961.1| chlorophyll a/b-binding protein [Hordeum vulgare subsp. vulgare]
Length = 75
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 21 LYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGGS FDPLGLA DPE L++ EIK+ RLAM + GF VQA TGKGPL N A HL
Sbjct: 1 LYPGGSYFDPLGLAADPEKKETLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHL 60
Query: 80 ADPVNNN 86
+DP++
Sbjct: 61 SDPLHTT 67
>gi|159147191|gb|ABW90990.1| LHCB4 [Bambusa oldhamii]
Length = 287
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 21 LYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGGS FDPLGLA DPE L++ EIK+ RLAM GF VQA TGKGPL N A HL
Sbjct: 212 LYPGGSYFDPLGLASDPEKKERLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHL 271
Query: 80 ADPVNNN 86
+DP++
Sbjct: 272 SDPLHTT 278
>gi|160713961|gb|ABX47016.1| chloroplast chlorophyll a/b binding protein cab-PhE7 [Phyllostachys
edulis]
Length = 287
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 21 LYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGGS FDPLGLA DPE L++ EIK+ RLAM GF VQA TGKGPL N A HL
Sbjct: 212 LYPGGSYFDPLGLASDPEKKERLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHL 271
Query: 80 ADPVNNN 86
+DP++
Sbjct: 272 SDPLHTT 278
>gi|13877547|gb|AAK43851.1|AF370474_1 chlorophyll a/b-binding protein CP29 [Arabidopsis thaliana]
gi|23198310|gb|AAN15682.1| chlorophyll a/b-binding protein CP29 [Arabidopsis thaliana]
Length = 290
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 21 LYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGG F DPL LA DPE A+L++ EIK+ RLAM + GF VQA TGKGPL N A HL
Sbjct: 216 LYPGGKFFDPLSLAADPEKTAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHL 275
Query: 80 ADPVNNN 86
+DP++
Sbjct: 276 SDPLHTT 282
>gi|242050544|ref|XP_002463016.1| hypothetical protein SORBIDRAFT_02g036260 [Sorghum bicolor]
gi|241926393|gb|EER99537.1| hypothetical protein SORBIDRAFT_02g036260 [Sorghum bicolor]
Length = 288
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 21 LYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGGS FDPLGLA DPE L++ EIK+ RLAM + GF VQA TGKGPL N A HL
Sbjct: 213 LYPGGSYFDPLGLAADPEKKERLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHL 272
Query: 80 ADPVNNN 86
+DP++
Sbjct: 273 SDPLHTT 279
>gi|194704284|gb|ACF86226.1| unknown [Zea mays]
Length = 269
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 19 DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
P YPGG F+PLGLA D E + K+KEIKNGRLAM +M GF VQA VT GP++NL
Sbjct: 193 QPGYPGGPLFNPLGLAKDIENAHDEKLKEIKNGRLAMVAMLGFMVQASVTHAGPIDNLLT 252
Query: 78 HLADPVNNN 86
HL+DP N N
Sbjct: 253 HLSDPFNKN 261
>gi|413939030|gb|AFW73581.1| chlorophyll a-b binding protein 4 [Zea mays]
Length = 315
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 19 DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
P YPGG F+PLGLA D E + K+KEIKNGRLAM +M GF VQA VT GP++NL
Sbjct: 239 QPGYPGGPLFNPLGLAKDIENAHDEKLKEIKNGRLAMVAMLGFMVQASVTHAGPIDNLLT 298
Query: 78 HLADPVNNN 86
HL+DP N N
Sbjct: 299 HLSDPFNKN 307
>gi|225580691|gb|ACN94453.1| photosystem I light-harvesting cholrophyll-a/b protein 2
[Dunaliella salina]
Length = 228
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 54/79 (68%), Gaps = 5/79 (6%)
Query: 21 LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
LYPGG+FDPLG + DP++F + K+KE+KNGRLAM + GF Q TGK LE L DHL+
Sbjct: 152 LYPGGAFDPLGFSKDPKSFEDKKLKELKNGRLAMVACLGFAGQHAATGKPILEALGDHLS 211
Query: 81 DPVNNNAWAYATN--FVPG 97
P NN +ATN VPG
Sbjct: 212 SPFFNN---FATNGVSVPG 227
>gi|226498858|ref|NP_001148187.1| LOC100281795 [Zea mays]
gi|195616580|gb|ACG30120.1| chlorophyll a-b binding protein 4 [Zea mays]
Length = 269
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 19 DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
P YPGG F+PLGLA D E + K+KEIKNGRLAM +M GF VQA VT GP++NL
Sbjct: 193 QPGYPGGPLFNPLGLAKDIENAHDEKLKEIKNGRLAMVAMLGFMVQASVTHAGPIDNLLT 252
Query: 78 HLADPVNNN 86
HL+DP N N
Sbjct: 253 HLSDPFNKN 261
>gi|357122377|ref|XP_003562892.1| PREDICTED: chlorophyll a-b binding protein CP29.2,
chloroplastic-like [Brachypodium distachyon]
Length = 288
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 21 LYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGGS FDPLGLA DPE L++ EIK+ RLAM GF VQA TGKGPL N A HL
Sbjct: 215 LYPGGSYFDPLGLAADPEKKERLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHL 274
Query: 80 ADPVNNN 86
+DP++
Sbjct: 275 SDPLHTT 281
>gi|307109464|gb|EFN57702.1| hypothetical protein CHLNCDRAFT_59626 [Chlorella variabilis]
Length = 249
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 22 YPGGSFDPLGLADDP-EAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
YPGG F+PLGL + E+ + K +EI+NGRLAM + GF Q TGKGPL+NLADHLA
Sbjct: 171 YPGGPFNPLGLGNSSKESMDDFKWREIRNGRLAMMAFLGFLAQHAATGKGPLDNLADHLA 230
Query: 81 DPVNNN 86
DP NN
Sbjct: 231 DPWANN 236
>gi|307104824|gb|EFN53076.1| hypothetical protein CHLNCDRAFT_36644 [Chlorella variabilis]
Length = 275
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 19 DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
+P YPGG F + L L PEA +L+ EI+NGRLAM + G F QA++T KGP NL D
Sbjct: 197 NPAYPGGQFFNMLNLGKTPEAMKKLQTNEIRNGRLAMIACLGCFGQAVMTTKGPFANLLD 256
Query: 78 HLADPVNNN 86
HLADP++NN
Sbjct: 257 HLADPISNN 265
>gi|413939029|gb|AFW73580.1| hypothetical protein ZEAMMB73_964613 [Zea mays]
Length = 158
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 19 DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
P YPGG F+PLGLA D E + K+KEIKNGRLAM +M GF VQA VT GP++NL
Sbjct: 82 QPGYPGGPLFNPLGLAKDIENAHDEKLKEIKNGRLAMVAMLGFMVQASVTHAGPIDNLLT 141
Query: 78 HLADPVNNN 86
HL+DP N N
Sbjct: 142 HLSDPFNKN 150
>gi|15231990|ref|NP_187506.1| chlorophyll a-b binding protein CP29.2 [Arabidopsis thaliana]
gi|38503262|sp|Q9XF88.1|CB4B_ARATH RecName: Full=Chlorophyll a-b binding protein CP29.2,
chloroplastic; AltName: Full=LHCB4.2; AltName:
Full=LHCII protein 4.2; Flags: Precursor
gi|4741954|gb|AAD28774.1|AF134127_1 Lhcb4.2 protein [Arabidopsis thaliana]
gi|6403491|gb|AAF07831.1|AC010871_7 putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|17473745|gb|AAL38316.1| putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|20148559|gb|AAM10170.1| putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|332641177|gb|AEE74698.1| chlorophyll a-b binding protein CP29.2 [Arabidopsis thaliana]
Length = 287
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 21 LYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGG F DPLGLA DP A+L++ EIK+ RLAM GF VQA TGKGPL N A HL
Sbjct: 213 LYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHL 272
Query: 80 ADPVNNN 86
+DP++
Sbjct: 273 SDPLHTT 279
>gi|307103837|gb|EFN52094.1| hypothetical protein CHLNCDRAFT_32710 [Chlorella variabilis]
Length = 264
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD 81
YPGG FDPLG + F E++ KEIKNGRLAM + F +QA TGKGPL NL DHLA
Sbjct: 169 YPGGPFDPLGFSKG--NFKEVQTKEIKNGRLAMVAFVAFTIQAQATGKGPLANLTDHLAS 226
Query: 82 PVNNN 86
P +NN
Sbjct: 227 PFSNN 231
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 66
FDP+GL +PE + E++N R AM + G Q I+
Sbjct: 59 FDPMGLGANPERLTWYRQAELQNARWAMLGVAGILGQEII 98
>gi|219362417|ref|NP_001136606.1| uncharacterized protein LOC100216729 [Zea mays]
gi|194696340|gb|ACF82254.1| unknown [Zea mays]
Length = 291
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 21 LYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGGS FDPL LA DPE L++ EIK+ RLAM + GF VQA TGKGPL N A HL
Sbjct: 216 LYPGGSYFDPLALAADPEKKERLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHL 275
Query: 80 ADPVNNN 86
+DP++
Sbjct: 276 SDPLHTT 282
>gi|459020|gb|AAA16605.1| light harvesting chlorophyll a/b binding protein of PSII, partial
[Euglena gracilis]
Length = 322
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/51 (78%), Positives = 44/51 (86%), Gaps = 1/51 (1%)
Query: 1 MGAVEGYRIAGG-PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNG 50
MGAVEGYR GG PLG+ D LYPGG FDPLGLA+DP+AFAELKVKE+KNG
Sbjct: 272 MGAVEGYRYGGGWPLGDDLDRLYPGGPFDPLGLANDPDAFAELKVKEVKNG 322
>gi|302851787|ref|XP_002957416.1| light-harvesting protein of photosystem I [Volvox carteri f.
nagariensis]
gi|300257220|gb|EFJ41471.1| light-harvesting protein of photosystem I [Volvox carteri f.
nagariensis]
Length = 241
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 53/76 (69%), Gaps = 5/76 (6%)
Query: 22 YPGGSF-DPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
YPGG F DP+GL+ D + + E K KEIKNGRLAM + GF Q TGKGPL+NLADHL
Sbjct: 164 YPGGRFFDPMGLSRGDADKYKEYKQKEIKNGRLAMIACLGFAAQYAATGKGPLDNLADHL 223
Query: 80 ADPVNNNAWAYATNFV 95
ADP + N +ATN V
Sbjct: 224 ADPNHVN---FATNGV 236
>gi|149242542|pdb|2O01|3 Chain 3, The Structure Of A Plant Photosystem I Supercomplex At 3.4
Angstrom Resolution
Length = 165
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 19 DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
+P YPGG F +PLG D ++ ELK+KE+KNGRLAM ++ G+F+Q +VTG GP +NL D
Sbjct: 103 NPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLD 162
Query: 78 HLA 80
HLA
Sbjct: 163 HLA 165
>gi|145356594|ref|XP_001422513.1| putative CP26, photosystem II light harvesting complex
[Ostreococcus lucimarinus CCE9901]
gi|144582756|gb|ABP00830.1| putative CP26, photosystem II light harvesting complex
[Ostreococcus lucimarinus CCE9901]
Length = 324
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 56/100 (56%), Gaps = 14/100 (14%)
Query: 1 MGAVEGYRIAG-GPLGEV-------------TDPLYPGGSFDPLGLADDPEAFAELKVKE 46
M VE +R +G GP G V DP+ PGG D +A +P+ A LKVKE
Sbjct: 212 MAGVEQFRSSGEGPAGFVPFKGKFDESAFKGLDPINPGGPLDFFNVASNPQDLALLKVKE 271
Query: 47 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 86
IKNGRLAM +M G FVQ + TG+GP N H+ADP N
Sbjct: 272 IKNGRLAMIAMLGVFVQGLTTGEGPAANWGKHVADPFGYN 311
>gi|74272669|gb|ABA01130.1| chloroplast light harvesting complex I protein [Chlamydomonas
incerta]
Length = 241
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 53/76 (69%), Gaps = 5/76 (6%)
Query: 22 YPGGSF-DPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
YPGG F DP+GL+ D +AE K KE+KNGRLAM + GF Q TGKGPL+NL+DHL
Sbjct: 164 YPGGRFFDPMGLSRGDAAKYAEYKQKEVKNGRLAMIACLGFAAQYAATGKGPLDNLSDHL 223
Query: 80 ADPVNNNAWAYATNFV 95
ADP + N +ATN V
Sbjct: 224 ADPNHIN---FATNGV 236
>gi|59710172|gb|AAW88575.1| light harvesting protein [Eleusine coracana subsp. coracana]
Length = 64
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/47 (78%), Positives = 40/47 (85%)
Query: 40 AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 86
A LKVKEIKNGRLAMFSMF FF+QA VTG GP+ENLA HL+DP NN
Sbjct: 3 ALLKVKEIKNGRLAMFSMFAFFIQAYVTGGGPVENLAKHLSDPFGNN 49
>gi|15081739|gb|AAK82524.1| AT5g01530/F7A7_50 [Arabidopsis thaliana]
Length = 290
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 21 LYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGG F DPLGLA DPE A+L++ EIK+ RLAM + GF VQA TGKGP A HL
Sbjct: 216 LYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPRNYWATHL 275
Query: 80 ADPVNNN 86
+DP++
Sbjct: 276 SDPLHTT 282
>gi|308808233|ref|XP_003081427.1| PSI-associated light-harvesting chlorophyll a/b binding protein,
(IC) [Ostreococcus tauri]
gi|63029293|gb|AAY27545.1| chloroplast light-harvesting complex I protein precursor Lhca2
[Ostreococcus tauri]
gi|116059889|emb|CAL55596.1| PSI-associated light-harvesting chlorophyll a/b binding protein,
(IC) [Ostreococcus tauri]
Length = 242
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 44/65 (67%)
Query: 18 TDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
TD YPGG FD LG A DP ELK+KEIKNGRLAM + G Q + TG+GP+ENL
Sbjct: 167 TDVGYPGGLFDKLGYAKDPAKAKELKLKEIKNGRLAMVAFLGICAQYVQTGQGPVENLFS 226
Query: 78 HLADP 82
H+A P
Sbjct: 227 HIASP 231
>gi|27542569|gb|AAO16495.1| light-harvesting complex I protein [Chlamydomonas reinhardtii]
Length = 241
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 52/76 (68%), Gaps = 5/76 (6%)
Query: 22 YPGGSF-DPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
YPGG F DP+GL+ D + E K KE+KNGRLAM + GF Q TGKGPL+NLADHL
Sbjct: 164 YPGGRFFDPMGLSRGDAAKYQEYKQKEVKNGRLAMIACLGFAAQYAATGKGPLDNLADHL 223
Query: 80 ADPVNNNAWAYATNFV 95
ADP + N +ATN V
Sbjct: 224 ADPNHVN---FATNGV 236
>gi|40714521|dbj|BAD06924.1| light-harvesting chlorophyll-a/b protein of photosystem I
[Chlamydomonas reinhardtii]
Length = 241
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 52/76 (68%), Gaps = 5/76 (6%)
Query: 22 YPGGSF-DPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
YPGG F DP+GL+ D + E K KE+KNGRLAM + GF Q TGKGPL+NLADHL
Sbjct: 164 YPGGRFFDPMGLSRGDAAKYQEYKQKEVKNGRLAMIACLGFAAQYAATGKGPLDNLADHL 223
Query: 80 ADPVNNNAWAYATNFV 95
ADP + N +ATN V
Sbjct: 224 ADPNHVN---FATNGV 236
>gi|15220077|ref|NP_175137.1| photosystem I light harvesting complex protein 5 [Arabidopsis
thaliana]
gi|30693978|ref|NP_849778.1| photosystem I light harvesting complex protein 5 [Arabidopsis
thaliana]
gi|12321000|gb|AAG50618.1|AC083835_3 light-harvesting complex protein [Arabidopsis thaliana]
gi|17063199|gb|AAL32974.1| At1g45474/F2G19.4 [Arabidopsis thaliana]
gi|19699116|gb|AAL90924.1| At1g45474/F2G19.4 [Arabidopsis thaliana]
gi|62320735|dbj|BAD95402.1| light-harvesting complex protein [Arabidopsis thaliana]
gi|332193996|gb|AEE32117.1| photosystem I light harvesting complex protein 5 [Arabidopsis
thaliana]
gi|332193997|gb|AEE32118.1| photosystem I light harvesting complex protein 5 [Arabidopsis
thaliana]
Length = 256
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 16 EVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 74
E +P YPGG +PLGLA D + + K+KEIKNGRLAM +M GFFVQA VT GP++N
Sbjct: 175 EGLEPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDN 234
Query: 75 LADHLADPVNNN 86
L +HL++P +
Sbjct: 235 LVEHLSNPWHKT 246
>gi|445116|prf||1908421A light-harvesting complex IIa protein
Length = 286
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 21 LYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
LYPGGS FDPLGLA DPE L++ EIK+ RLAM + GF VQA TGKG L N A HL
Sbjct: 212 LYPGGSYFDPLGLAADPEKKETLQLAEIKHARLAMVAFLGFAVQAAATGKGRLNNWATHL 271
Query: 80 ADPVNNN 86
+DP++
Sbjct: 272 SDPLHTT 278
>gi|4741942|gb|AAD28768.1|AF134121_1 Lhca5 protein [Arabidopsis thaliana]
Length = 256
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 16 EVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 74
E +P YPGG +PLGLA D + + K+KEIKNGRLAM +M GFFVQA VT GP++N
Sbjct: 175 EGLEPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDN 234
Query: 75 LADHLADPVNNN 86
L +HL++P +
Sbjct: 235 LVEHLSNPWHKT 246
>gi|222423311|dbj|BAH19631.1| AT1G45474 [Arabidopsis thaliana]
Length = 248
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 16 EVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 74
E +P YPGG +PLGLA D + + K+KEIKNGRLAM +M GFFVQA VT GP++N
Sbjct: 167 EGLEPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDN 226
Query: 75 LADHLADPVNNN 86
L +HL++P +
Sbjct: 227 LVEHLSNPWHKT 238
>gi|303288722|ref|XP_003063649.1| chlorophyll a/b-binding protein CP26, chloroplast precursor
[Micromonas pusilla CCMP1545]
gi|226454717|gb|EEH52022.1| chlorophyll a/b-binding protein CP26, chloroplast precursor
[Micromonas pusilla CCMP1545]
Length = 306
Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 44/68 (64%)
Query: 19 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 78
DP+ PGG D +A PE A LKVKEIKNGRLAM +M G FVQ + TG+GP N H
Sbjct: 226 DPINPGGPLDFFNVASTPEDLAILKVKEIKNGRLAMIAMLGVFVQGLTTGEGPAANWGKH 285
Query: 79 LADPVNNN 86
+ADP N
Sbjct: 286 VADPFGYN 293
>gi|297846882|ref|XP_002891322.1| light-harvesting complex protein [Arabidopsis lyrata subsp. lyrata]
gi|297337164|gb|EFH67581.1| light-harvesting complex protein [Arabidopsis lyrata subsp. lyrata]
Length = 256
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 16 EVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 74
E +P YPGG +PLGLA D + + K+KEIKNGRLAM +M GFFVQA VT GP++N
Sbjct: 175 EGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDN 234
Query: 75 LADHLADPVNNN 86
L +HL++P +
Sbjct: 235 LVEHLSNPWHKT 246
>gi|388504276|gb|AFK40204.1| unknown [Lotus japonicus]
Length = 202
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/36 (100%), Positives = 36/36 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDP 36
MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDP
Sbjct: 167 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDP 202
>gi|124388816|gb|ABN10530.1| Lhca5 protein [Gentiana lutea]
Length = 272
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 19 DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
+P YPGG +PLG+A D + E K+KEIKNGRLAM ++ G FVQA VT GPLENL +
Sbjct: 194 EPGYPGGPILNPLGIAKDIKNAPEWKLKEIKNGRLAMVAILGIFVQASVTHVGPLENLVE 253
Query: 78 HLADP 82
HL+DP
Sbjct: 254 HLSDP 258
>gi|21593722|gb|AAM65689.1| light-harvesting complex protein [Arabidopsis thaliana]
Length = 256
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Query: 16 EVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 74
E +P YPGG +PLGLA D + + K+KEIKNGRLAM +M GFFVQA VT GP++N
Sbjct: 175 EGLEPGYPGGPLLNPLGLAKDVKNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDN 234
Query: 75 LADHLADP 82
L +HL++P
Sbjct: 235 LVEHLSNP 242
>gi|255538312|ref|XP_002510221.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223550922|gb|EEF52408.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 269
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 19 DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
+P YPGG +P GLA D + + K+KEIKNGRLAM +M G FVQA VT GP++NL +
Sbjct: 191 EPGYPGGPLLNPFGLAKDIRSARDWKLKEIKNGRLAMVAMLGIFVQAAVTHTGPIDNLLE 250
Query: 78 HLADPVNNN 86
HL+DP +
Sbjct: 251 HLSDPWHKT 259
>gi|87313171|gb|ABD37882.1| light-harvesting chlorophyll-a/b binding protein Lhca4.2
[Mesostigma viride]
gi|145079732|tpg|DAA05926.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca5 [Mesostigma viride]
Length = 246
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 20 PLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
P YPGG FDPLG + E K KE++NGRLAM + G F+Q TGK PL NLADHL
Sbjct: 175 PGYPGGMFDPLGFSKG--NLEESKWKELRNGRLAMVASLGMFIQYDATGKSPLTNLADHL 232
Query: 80 ADPVNNNAWA 89
ADP +NN A
Sbjct: 233 ADPWHNNVCA 242
>gi|87313163|gb|ABD37878.1| light-harvesting chlorophyll-a/b binding protein Lhca1 [Mesostigma
viride]
gi|145079752|tpg|DAA05929.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca1 [Mesostigma viride]
Length = 225
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 46/67 (68%), Gaps = 4/67 (5%)
Query: 21 LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
+YPGG+FDPLG D KVKE++NGRLAM + G + Q I G GP+ NL DHLA
Sbjct: 158 IYPGGAFDPLGFGKDEVN----KVKELRNGRLAMVAFVGMWCQGIHVGGGPVSNLMDHLA 213
Query: 81 DPVNNNA 87
DP++NNA
Sbjct: 214 DPLHNNA 220
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 66
+DPLGLA DP + A + E+ NGR AM + G +V
Sbjct: 62 YDPLGLAKDPVSLARYREAEVMNGRWAMLGVAGMLAPELV 101
>gi|145079801|tpg|DAA05936.1| TPA_inf: chloroplast light-harvesting complex protein CP26
precursor Lhcb5 [Micromonas sp. CCMP490]
Length = 333
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 49/78 (62%), Gaps = 8/78 (10%)
Query: 19 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVT-GKGPLENLAD 77
DP+ PGG D L +A PE A LKVKEIKNGRLAM +M G FVQ T G+GP N A
Sbjct: 252 DPINPGGPLDFLNVASTPEDLAILKVKEIKNGRLAMIAMLGVFVQGATTGGEGPATNWAK 311
Query: 78 HLADPVNNNAWAYATNFV 95
H+ADP +A NFV
Sbjct: 312 HVADP-------FAYNFV 322
>gi|63029307|gb|AAY27552.1| chloroplast prasinophyte chlorophyll a/b-binding protein Lhcp2.2
[Ostreococcus tauri]
Length = 233
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 5/90 (5%)
Query: 1 MGAVEGYR--IAGGPL--GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFS 56
+GA E YR I+ P G + PGG FDPLGLA+ + ELK+KE+K+ RL+MF+
Sbjct: 133 VGAAEAYRTGISDSPFDDGLTVGDVNPGGRFDPLGLAESGD-LEELKIKELKHCRLSMFA 191
Query: 57 MFGFFVQAIVTGKGPLENLADHLADPVNNN 86
G QA+ T +GP+ N H+ADPV++N
Sbjct: 192 WLGCIFQALATQEGPIANWQSHVADPVHSN 221
>gi|308812366|ref|XP_003083490.1| prasinophyte specific LHC gene (IC) [Ostreococcus tauri]
gi|63029291|gb|AAY27544.1| chloroplast prasinophyte chlorophyll a/b-binding protein Lhcp2.1
[Ostreococcus tauri]
gi|116055371|emb|CAL58039.1| prasinophyte specific LHC gene (IC), partial [Ostreococcus tauri]
Length = 233
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 5/90 (5%)
Query: 1 MGAVEGYR--IAGGPL--GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFS 56
+GA E YR I+ P G + PGG FDPLGLA+ + ELK+KE+K+ RL+MF+
Sbjct: 133 VGAAEAYRTGISDSPFDDGLTVGDVNPGGRFDPLGLAESGD-LEELKIKELKHCRLSMFA 191
Query: 57 MFGFFVQAIVTGKGPLENLADHLADPVNNN 86
G QA+ T +GP+ N H+ADPV++N
Sbjct: 192 WLGCIFQALATQEGPIANWQSHVADPVHSN 221
>gi|308806061|ref|XP_003080342.1| prasinophyte specific LHC (IC) [Ostreococcus tauri]
gi|63029309|gb|AAY27553.1| chloroplast prasinophyte chlorophyll a/b-binding protein Lhcp2.3
[Ostreococcus tauri]
gi|116058802|emb|CAL54509.1| prasinophyte specific LHC (IC), partial [Ostreococcus tauri]
Length = 233
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 5/90 (5%)
Query: 1 MGAVEGYR--IAGGPL--GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFS 56
+GA E YR I+ P G + PGG FDPLGLA+ + ELK+KE+K+ RL+MF+
Sbjct: 133 VGAAEAYRTGISDSPFDDGLTVGDVNPGGRFDPLGLAESGD-LEELKIKELKHCRLSMFA 191
Query: 57 MFGFFVQAIVTGKGPLENLADHLADPVNNN 86
G QA+ T +GP+ N H+ADPV++N
Sbjct: 192 WLGCIFQALATQEGPIANWQSHVADPVHSN 221
>gi|145344454|ref|XP_001416747.1| prasinophyte light harvesting complex, chlorophyll binding
[Ostreococcus lucimarinus CCE9901]
gi|145345055|ref|XP_001417039.1| prasinophyte light harvesting complex, chlorophyll binding
[Ostreococcus lucimarinus CCE9901]
gi|145348539|ref|XP_001418704.1| prasinophyte light harvesting complex, chlorophyll binding
[Ostreococcus lucimarinus CCE9901]
gi|145354851|ref|XP_001421688.1| prasinophyte light harvesting complex, chlorophyll binding
[Ostreococcus lucimarinus CCE9901]
gi|144576973|gb|ABO95040.1| prasinophyte light harvesting complex, chlorophyll binding
[Ostreococcus lucimarinus CCE9901]
gi|144577265|gb|ABO95332.1| prasinophyte light harvesting complex, chlorophyll binding
[Ostreococcus lucimarinus CCE9901]
gi|144578934|gb|ABO96997.1| prasinophyte light harvesting complex, chlorophyll binding
[Ostreococcus lucimarinus CCE9901]
gi|144581926|gb|ABO99981.1| prasinophyte light harvesting complex, chlorophyll binding
[Ostreococcus lucimarinus CCE9901]
Length = 233
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 5/90 (5%)
Query: 1 MGAVEGYR--IAGGPL--GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFS 56
+GA E YR I+ P G + PGG FDPLGLA+ + ELK+KE+K+ RL+MF+
Sbjct: 133 VGAAEAYRTGISDSPFDDGLTVGDVNPGGRFDPLGLAESGD-LEELKIKELKHCRLSMFA 191
Query: 57 MFGFFVQAIVTGKGPLENLADHLADPVNNN 86
G QA+ T +GP+ N H+ADPV++N
Sbjct: 192 WLGCIFQALATQEGPIANWQSHVADPVHSN 221
>gi|424513344|emb|CCO65966.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Bathycoccus prasinos]
Length = 231
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 56/90 (62%), Gaps = 5/90 (5%)
Query: 1 MGAVEGYR--IAGGPL--GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFS 56
+GA E YR +A P G V + PGG FDPLGLA+ + ELK+KE+K+ RL+MF+
Sbjct: 131 VGAAEAYRTGLAANPFDDGLVAGDVSPGGRFDPLGLAESGD-LEELKIKELKHCRLSMFA 189
Query: 57 MFGFFVQAIVTGKGPLENLADHLADPVNNN 86
G QA+ T +GP+ N H ADPV+ N
Sbjct: 190 WLGCIFQALATQEGPIANWTAHTADPVHAN 219
>gi|255087238|ref|XP_002505542.1| chlorophyll a/b-binding protein CP26, chloroplast precursor
[Micromonas sp. RCC299]
gi|226520812|gb|ACO66800.1| chlorophyll a/b-binding protein CP26, chloroplast precursor
[Micromonas sp. RCC299]
Length = 308
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 54/99 (54%), Gaps = 15/99 (15%)
Query: 3 AVEGYRIAGGPL--------GEVT-------DPLYPGGSFDPLGLADDPEAFAELKVKEI 47
AVEGYR P G+ + DP+ PGG D +A P+ A LKVKEI
Sbjct: 197 AVEGYRAGKAPAPDGFVPFKGKFSGSDFSGLDPINPGGPLDFFNVAATPDDLAVLKVKEI 256
Query: 48 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 86
KNGRLAM +M G FVQ + TG+GP N H+ADP N
Sbjct: 257 KNGRLAMIAMLGVFVQGLTTGEGPAANWGKHVADPFGYN 295
>gi|357465507|ref|XP_003603038.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355492086|gb|AES73289.1| Chlorophyll a-b binding protein [Medicago truncatula]
Length = 267
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 19 DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
+P YPGG +PLGLA D ++ E K+KEIKNGRLAM ++ G FVQA VT GP++NL +
Sbjct: 189 EPGYPGGPLLNPLGLAKDIKSAREWKLKEIKNGRLAMVAILGIFVQASVTHVGPIDNLVE 248
Query: 78 HLADPVNNN 86
HL++P +
Sbjct: 249 HLSNPWHKT 257
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 70
FDPLGL +DPE+ E+ + R AM + G V ++ G
Sbjct: 81 FDPLGLGEDPESLKWYVQAELVHSRFAMLGVLGILVTDLLRVAG 124
>gi|302832608|ref|XP_002947868.1| chlorophyll a/b-binding protein [Volvox carteri f. nagariensis]
gi|300266670|gb|EFJ50856.1| chlorophyll a/b-binding protein [Volvox carteri f. nagariensis]
Length = 151
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 19 DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
D YPGG FDPL A D + F + V+EIKNGRLAM +M G FVQA VT KGP+EN+ +
Sbjct: 69 DQNYPGGGPFDPLNYAADADGFVDQAVREIKNGRLAMVAMLGLFVQAAVTKKGPVENVME 128
Query: 78 HLADPVNNNAWAYATNFVPG 97
++DP N + + G
Sbjct: 129 FVSDPAGENIFTNVARLLSG 148
>gi|308802077|ref|XP_003078352.1| prasinophyte specific LHC (IC) [Ostreococcus tauri]
gi|116056804|emb|CAL53093.1| prasinophyte specific LHC (IC), partial [Ostreococcus tauri]
Length = 212
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 5/90 (5%)
Query: 1 MGAVEGYR--IAGGPL--GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFS 56
+GA E YR I+ P G + PGG FDPLGLA+ + ELK+KE+K+ RL+MF+
Sbjct: 112 VGAAEAYRTGISDSPFDDGLTVGDVNPGGRFDPLGLAESGD-LEELKIKELKHCRLSMFA 170
Query: 57 MFGFFVQAIVTGKGPLENLADHLADPVNNN 86
G QA+ T +GP+ N H+ADPV++N
Sbjct: 171 WLGCIFQALATQEGPIANWQSHVADPVHSN 200
>gi|63029285|gb|AAY27541.1| chloroplast prasinophyte chlorophyll a/b-binding protein Lhcp2.4
[Ostreococcus tauri]
Length = 211
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 5/90 (5%)
Query: 1 MGAVEGYR--IAGGPL--GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFS 56
+GA E YR I+ P G + PGG FDPLGLA+ + ELK+KE+K+ RL+MF+
Sbjct: 111 VGAAEAYRTGISDSPFDDGLTVGDVNPGGRFDPLGLAESGD-LEELKIKELKHCRLSMFA 169
Query: 57 MFGFFVQAIVTGKGPLENLADHLADPVNNN 86
G QA+ T +GP+ N H+ADPV++N
Sbjct: 170 WLGCIFQALATQEGPIANWQSHVADPVHSN 199
>gi|11066109|gb|AAG28464.1|AF195794_1 chlorophyll A-B binding protein of LHCI [Chlamydomonas reinhardtii]
Length = 239
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 41/60 (68%)
Query: 23 PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 82
PGG+FDPLG A D ELK+KEIKNGRLAM + GF Q TGK PL L +HLA+P
Sbjct: 154 PGGAFDPLGFAKDSSKSGELKLKEIKNGRLAMVAFLGFVAQHAATGKAPLAALGEHLANP 213
>gi|384251522|gb|EIE24999.1| light-harvesting chlorophyll a/b-binding protein Lhca3 [Coccomyxa
subellipsoidea C-169]
Length = 274
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD 81
YPGG FDP G + F E++ KEIKNGRLAM + GF +QA TG+GPL NL HLA+
Sbjct: 181 YPGGIFDPFGFSKG--NFKEVQTKEIKNGRLAMVAFVGFIIQAQATGQGPLANLGAHLAN 238
Query: 82 PVNNN 86
P NN
Sbjct: 239 PFGNN 243
>gi|168041250|ref|XP_001773105.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675652|gb|EDQ62145.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 241
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV-TGKGPLENLADHLA 80
YPGG+FDPLG + ELK+KEIKNGRLA+ + GF VQAI G GPLENL HLA
Sbjct: 166 YPGGAFDPLGFSKGAN-LEELKLKEIKNGRLALVAFLGFAVQAIAYPGTGPLENLKTHLA 224
Query: 81 DPVNNN 86
DP +N
Sbjct: 225 DPWHNT 230
>gi|225458605|ref|XP_002284724.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic [Vitis
vinifera]
gi|302142320|emb|CBI19523.3| unnamed protein product [Vitis vinifera]
Length = 264
Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 16 EVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 74
E +P YPGG +PLGLA D + + K+KEIKNGRLAM +M G FVQA VT GP+EN
Sbjct: 184 EGLEPGYPGGPLLNPLGLARDIKNAHDWKLKEIKNGRLAMVAMLGVFVQASVTHAGPIEN 243
Query: 75 LADHLADPVNNN 86
L +HL++P +
Sbjct: 244 LVEHLSNPWHKT 255
>gi|424513454|emb|CCO66076.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Bathycoccus prasinos]
Length = 231
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 56/90 (62%), Gaps = 5/90 (5%)
Query: 1 MGAVEGYR--IAGGPL--GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFS 56
+G E YR +A P G V + PGG FDPLGLA+ + ELK+KE+K+ RL+MF+
Sbjct: 131 VGGAEAYRTGLAANPFDDGLVAGDVSPGGRFDPLGLAESGD-LEELKIKELKHCRLSMFA 189
Query: 57 MFGFFVQAIVTGKGPLENLADHLADPVNNN 86
G +QA+ T +GP+ N H ADPV+ N
Sbjct: 190 WLGCIMQALATQEGPIANWTAHTADPVHAN 219
>gi|302849410|ref|XP_002956235.1| hypothetical protein VOLCADRAFT_66679 [Volvox carteri f.
nagariensis]
gi|300258538|gb|EFJ42774.1| hypothetical protein VOLCADRAFT_66679 [Volvox carteri f.
nagariensis]
Length = 276
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 19 DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
D YPGG FDPL A D + F + V+EIKNGRLAM +M G FVQA VT KGP++N+ +
Sbjct: 199 DQNYPGGGPFDPLNYAADADGFVDQAVREIKNGRLAMVAMLGLFVQAAVTKKGPVQNVME 258
Query: 78 HLADPVNNN 86
++DP N
Sbjct: 259 FVSDPAGEN 267
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 70
FDPL L DP AFA + E+ + R AM G V ++ +G
Sbjct: 83 FDPLELGKDPGAFARFREVELLHARWAMLGFVGCMVPELLALRG 126
>gi|313302|emb|CAA51943.1| chlorophyll a/b /c binding protein precursor [Mantoniella squamata]
Length = 231
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 4/89 (4%)
Query: 1 MGAVEGYR--IAGGPLGEVT-DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 57
+G E YR ++ P E+T + PGG FDPLGLA+ + ELK+KE+K+ RL+MF+
Sbjct: 132 VGLAEAYRTGLSDSPFEELTVGDVSPGGRFDPLGLAESGD-LEELKIKELKHCRLSMFAW 190
Query: 58 FGFFVQAIVTGKGPLENLADHLADPVNNN 86
G QA+ T +GP+ N H+ADPV+ N
Sbjct: 191 LGCIFQALATQEGPIANWQAHVADPVHAN 219
>gi|87313165|gb|ABD37879.1| light-harvesting chlorophyll-a/b binding protein Lhca2 [Mesostigma
viride]
Length = 242
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD 81
YPGG FDPLG + ELK+KEIKNGRLAM + G FVQ TG PL+NLA HLAD
Sbjct: 169 YPGGPFDPLGFSKG--NLPELKLKEIKNGRLAMVASLGLFVQYSATGASPLDNLAAHLAD 226
Query: 82 PVNNNAWA 89
P + N +A
Sbjct: 227 PGHANIFA 234
>gi|412986902|emb|CCO15328.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Bathycoccus prasinos]
Length = 230
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 8/91 (8%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLY-----PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF 55
+GA EGYR G + V D L PGG FDPLGLA+ + ELK+KE+K+ RL+MF
Sbjct: 131 VGAAEGYRT--GLIDPVFDELSVGDVSPGGRFDPLGLAESGD-LEELKIKELKHCRLSMF 187
Query: 56 SMFGFFVQAIVTGKGPLENLADHLADPVNNN 86
+ G QA+ T +GP+ N H ADPV+ N
Sbjct: 188 AWLGCIFQALATQEGPIANWQAHTADPVHAN 218
>gi|145079606|tpg|DAA05920.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca4 [Mesostigma viride]
Length = 238
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD 81
YPGG FDPLG + ELK+KEIKNGRLAM + G FVQ TG PL+NLA HLAD
Sbjct: 165 YPGGPFDPLGFSKG--NLPELKLKEIKNGRLAMVASLGLFVQYSATGASPLDNLAAHLAD 222
Query: 82 PVNNNAWA 89
P + N +A
Sbjct: 223 PGHANIFA 230
>gi|384253050|gb|EIE26525.1| light-harvesting chlorophyll-a/b protein of photosystem I
[Coccomyxa subellipsoidea C-169]
Length = 272
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 52/77 (67%), Gaps = 5/77 (6%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD 81
YPGG F P+ P AELK+KEIKNGRLAM + GF +QA VTGKGPL +L DHL++
Sbjct: 171 YPGGIFAPV----IPGDLAELKLKEIKNGRLAMLAFAGFVMQAQVTGKGPLASLGDHLSN 226
Query: 82 PVNNNAWAYATNFVPGK 98
P+ ++ A +PG+
Sbjct: 227 PIGTTIFSKAV-VIPGQ 242
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 22/40 (55%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 66
FDPLGL DPE A E + R AM ++ G VQ +V
Sbjct: 62 FDPLGLGADPERLAWFAESERVHARWAMLAVAGIAVQEVV 101
>gi|313300|emb|CAA51944.1| chlorophyll a/b /c binding protein precursor [Mantoniella squamata]
Length = 222
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 4/89 (4%)
Query: 1 MGAVEGYR--IAGGPLGEVT-DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 57
+G E YR ++ P E+T + PGG FDPLGLA+ + ELK+KE+K+ RL+MF+
Sbjct: 123 VGLAEAYRTGLSDSPFEELTVGDVSPGGRFDPLGLAESGD-LEELKIKELKHCRLSMFAW 181
Query: 58 FGFFVQAIVTGKGPLENLADHLADPVNNN 86
G QA+ T +GP+ N H+ADPV+ N
Sbjct: 182 LGCIFQALATQEGPIANWQAHVADPVHAN 210
>gi|145341715|ref|XP_001415950.1| prasinophyte light harvesting complex, chlorophyll binding protein
[Ostreococcus lucimarinus CCE9901]
gi|144576173|gb|ABO94242.1| prasinophyte light harvesting complex, chlorophyll binding protein
[Ostreococcus lucimarinus CCE9901]
Length = 254
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 57/89 (64%), Gaps = 4/89 (4%)
Query: 1 MGAVEGYR--IAGGPLGEVTD-PLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 57
+G+ E YR I P E+T + PGG FDPLG A+ + ELK+KE+K+ RL+MF+
Sbjct: 155 VGSAESYRTGIFENPFPELTQGDVTPGGRFDPLGFAEAGD-LEELKIKELKHSRLSMFAW 213
Query: 58 FGFFVQAIVTGKGPLENLADHLADPVNNN 86
G QA+ T +GP+ N H+ADP+++N
Sbjct: 214 LGCIFQALATQEGPIANWQSHVADPIHSN 242
>gi|424513686|emb|CCO66308.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Bathycoccus prasinos]
Length = 231
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 55/90 (61%), Gaps = 5/90 (5%)
Query: 1 MGAVEGYR--IAGGPL--GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFS 56
+G E YR +A P G V + PGG FDPLGLA+ + ELK+KE+K+ RL+MF+
Sbjct: 131 VGGAEAYRTGLAANPFDDGLVAGDVSPGGRFDPLGLAESGD-LEELKIKELKHCRLSMFA 189
Query: 57 MFGFFVQAIVTGKGPLENLADHLADPVNNN 86
G QA+ T +GP+ N H ADPV+ N
Sbjct: 190 WLGCIFQALATQEGPIANWTAHTADPVHAN 219
>gi|424513507|emb|CCO66129.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Bathycoccus prasinos]
Length = 235
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 55/90 (61%), Gaps = 5/90 (5%)
Query: 1 MGAVEGYR--IAGGPL--GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFS 56
+G E YR +A P G V + PGG FDPLGLA+ + ELK+KE+K+ RL+MF+
Sbjct: 135 VGGAEAYRTGLAANPFDDGLVAGDVSPGGRFDPLGLAESGD-LEELKIKELKHCRLSMFA 193
Query: 57 MFGFFVQAIVTGKGPLENLADHLADPVNNN 86
G QA+ T +GP+ N H ADPV+ N
Sbjct: 194 WLGCIFQALATQEGPIANWTAHTADPVHAN 223
>gi|384245553|gb|EIE19046.1| hypothetical protein COCSUDRAFT_67947 [Coccomyxa subellipsoidea
C-169]
Length = 737
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 43/60 (71%), Gaps = 5/60 (8%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 86
FDPL L +D + E++N RLAM + GF+ QA VTGKGPL+NL+DHLADPVNNN
Sbjct: 166 FDPLNLRNDYR-----RQSEVRNARLAMLANLGFWSQAAVTGKGPLQNLSDHLADPVNNN 220
>gi|449466336|ref|XP_004150882.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic-like
[Cucumis sativus]
gi|449522610|ref|XP_004168319.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic-like
[Cucumis sativus]
Length = 259
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 19 DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
+P YPGG +PLG+A D + + K+KEIKNGRLAM +M G FVQA VT GP++NL +
Sbjct: 181 EPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVE 240
Query: 78 HLADPVNNN 86
HL++P +
Sbjct: 241 HLSNPWHKT 249
>gi|732534|gb|AAB40979.1| light harvesting complex a [Volvox carteri]
Length = 264
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 19 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 78
+P YPGG FDP G + LK KEIKNGRLAM + GF QA TG PL+NLA H
Sbjct: 190 EPGYPGGIFDPFGWSKGD--MKSLKTKEIKNGRLAMLAFAGFAAQAYTTGTTPLKNLATH 247
Query: 79 LADPVNNNAW 88
LADP W
Sbjct: 248 LADPWATTVW 257
>gi|168041643|ref|XP_001773300.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675342|gb|EDQ61838.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 198
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV-TGKGPLENLADHLA 80
YPGG FDPLG + ELK+KEIKNGRLA+ + GF VQA+ G GPLENL HLA
Sbjct: 123 YPGGPFDPLGFSKGAN-LEELKLKEIKNGRLALVAFLGFVVQAVAYPGTGPLENLKTHLA 181
Query: 81 DPVNNN 86
DP +N
Sbjct: 182 DPWHNT 187
>gi|303274206|ref|XP_003056426.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas pusilla CCMP1545]
gi|226462510|gb|EEH59802.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas pusilla CCMP1545]
Length = 257
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 1 MGAVEGYRIA--GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
+G+ E YR P E+ + PGG FDPLG A+ + ELKVKE+K+ RL+MF+
Sbjct: 159 VGSAECYRTGLFENPFPELELSVTPGGRFDPLGFAEAGD-LEELKVKELKHCRLSMFAWL 217
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNN 86
G QA+ T +GP+ N H+ADPV+ N
Sbjct: 218 GCIAQALATQEGPIANWQAHVADPVHAN 245
>gi|308811240|ref|XP_003082928.1| unnamed protein product [Ostreococcus tauri]
gi|63029301|gb|AAY27549.1| chloroplast chlorophyll a/b-binding protein CP26 precursor Lhcb5
[Ostreococcus tauri]
gi|116054806|emb|CAL56883.1| unnamed protein product [Ostreococcus tauri]
Length = 316
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 54/100 (54%), Gaps = 14/100 (14%)
Query: 1 MGAVEGYRIAG-GPLGEV-------------TDPLYPGGSFDPLGLADDPEAFAELKVKE 46
MG E +R G GP G V DP+ PGG D +A +P+ LKVKE
Sbjct: 203 MGGAEKFRQDGVGPAGFVPFKGKFEESAFNGLDPVNPGGPLDFFDVAKNPQDLQILKVKE 262
Query: 47 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 86
IKNGRLAM +M G FVQ VTG+GP N H+A+P N
Sbjct: 263 IKNGRLAMIAMLGVFVQGAVTGEGPAANWGKHVANPFGYN 302
>gi|224137478|ref|XP_002327136.1| light-harvesting complex I protein Lhca5 [Populus trichocarpa]
gi|222835451|gb|EEE73886.1| light-harvesting complex I protein Lhca5 [Populus trichocarpa]
Length = 266
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 16 EVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 74
E +P YPGG +PLGLA D E K+KEIKNGRLAM +M G FVQA VT GP++N
Sbjct: 185 EGLEPGYPGGPLLNPLGLARDIENAHVWKLKEIKNGRLAMVAMVGIFVQAAVTHAGPIDN 244
Query: 75 LADHLADPVNNN 86
L +HL++P +
Sbjct: 245 LIEHLSNPWHRT 256
>gi|302831910|ref|XP_002947520.1| light harvesting complex A [Volvox carteri f. nagariensis]
gi|300267384|gb|EFJ51568.1| light harvesting complex A [Volvox carteri f. nagariensis]
Length = 264
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 19 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 78
+P YPGG FDP G + LK KEIKNGRLAM + GF QA TG PL+NLA H
Sbjct: 190 EPGYPGGIFDPFGWSKGD--MKSLKTKEIKNGRLAMLAFAGFAAQAYTTGTTPLKNLATH 247
Query: 79 LADPVNNNAW 88
LADP W
Sbjct: 248 LADPWATTVW 257
>gi|388518909|gb|AFK47516.1| unknown [Lotus japonicus]
Length = 266
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 16 EVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 74
E +P YPGG +PLGLA D + E K+KEIKNGRLAM ++ G FVQA VT GP++N
Sbjct: 185 EGLEPGYPGGPLLNPLGLAKDIKNARESKLKEIKNGRLAMVAILGIFVQASVTHVGPIDN 244
Query: 75 LADHLADPVNNN 86
L +HL++P +
Sbjct: 245 LVEHLSNPWHKT 256
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 70
FDPLGL +DPE+ E+ + R AM +FG V ++ G
Sbjct: 80 FDPLGLGEDPESLRWYVQAELVHARFAMLGVFGILVTDLLRVTG 123
>gi|168052965|ref|XP_001778909.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669663|gb|EDQ56245.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 198
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV-TGKGPLENLADHLA 80
YPGG+FDP+G + ELK+KEIKNGRLA+ + GF +QAI G GPLENL HLA
Sbjct: 123 YPGGAFDPMGFSKGAN-LEELKLKEIKNGRLALVAFLGFAIQAIAYPGTGPLENLKTHLA 181
Query: 81 DPVNNN 86
DP +N
Sbjct: 182 DPWHNT 187
>gi|412993661|emb|CCO14172.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Bathycoccus prasinos]
Length = 253
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 1 MGAVEGYR--IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
+G E YR I P E+ + PGG FDPLG A+ + ELK+KE+K+ RL+MF+
Sbjct: 155 VGNAEAYRTGIFENPFPELELSVSPGGRFDPLGFAEAGD-LEELKIKELKHCRLSMFAWL 213
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNN 86
G QA+ T +GP+ N H+ADPV+ N
Sbjct: 214 GCIFQALATQEGPIANWQAHVADPVHAN 241
>gi|304571350|dbj|BAJ15793.1| chlorophyll a-b binding protein, partial [Pieris nana]
Length = 79
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QAI TG GP++NL
Sbjct: 13 TDVGYPGGLWFDPLGWGSGSPEKVMELRTKEIKNGRLAMLAVMGAWFQAIYTGTGPIDNL 72
Query: 76 ADHLADP 82
HLADP
Sbjct: 73 FAHLADP 79
>gi|225425420|ref|XP_002277906.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic [Vitis
vinifera]
gi|297738455|emb|CBI27656.3| unnamed protein product [Vitis vinifera]
Length = 271
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG P+ EL+ KEIKNGRLAM ++ G + QAI TG GP++NL
Sbjct: 193 TDVGYPGGLWFDPLGWGSGSPDKIKELRTKEIKNGRLAMLAVMGAWFQAIYTGTGPIDNL 252
Query: 76 ADHLADP 82
HLADP
Sbjct: 253 FAHLADP 259
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
FDPLGL DPE + EI + R AM G F+ +T G L + + A
Sbjct: 89 FDPLGLGSDPETLKWMVQSEIVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTA 142
>gi|40714509|dbj|BAD06918.1| light-harvesting chlorophyll-a/b protein of photosystem I
[Chlamydomonas reinhardtii]
Length = 264
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 19 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 78
+P YPGG FDP G + LK+KEIKNGRLAM + GF QA TG PL+NL+ H
Sbjct: 190 EPGYPGGIFDPFGWSKGD--IKSLKLKEIKNGRLAMLAFAGFIGQAYTTGTTPLKNLSTH 247
Query: 79 LADPVNNNAW 88
LADP + W
Sbjct: 248 LADPWSTTVW 257
>gi|307106621|gb|EFN54866.1| hypothetical protein CHLNCDRAFT_134943 [Chlorella variabilis]
Length = 268
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 5 EGYRIAGGPLGEVTDPLYPGGSF-DPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFV 62
E ++ GGP G Y GG F DP+GL PE + K EI+NGRLAM GF
Sbjct: 172 EDFKGVGGPQGRTVGGPYVGGRFFDPMGLCRGSPEQTLKYKWNEIRNGRLAMIGFLGFAA 231
Query: 63 QAIVTGKGPLENLADHLADPVNNN 86
Q TGKGP++NL DH++DP + N
Sbjct: 232 QYCATGKGPIDNLIDHVSDPTHVN 255
>gi|159480898|ref|XP_001698519.1| light-harvesting protein of photosystem I [Chlamydomonas
reinhardtii]
gi|158282259|gb|EDP08012.1| light-harvesting protein of photosystem I [Chlamydomonas
reinhardtii]
Length = 262
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 19 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 78
+P YPGG FDP G + LK+KEIKNGRLAM + GF QA TG PL+NL+ H
Sbjct: 190 EPGYPGGIFDPFGWSKGD--IKSLKLKEIKNGRLAMLAFAGFIGQAYTTGTTPLKNLSTH 247
Query: 79 LADPVNNNAW 88
LADP + W
Sbjct: 248 LADPWSTTVW 257
>gi|293218|gb|AAA20111.1| chlorophyll a/b binding protein [Mantoniella squamata]
gi|311364|emb|CAA80458.1| chlorophyll a/b binding protein [Mantoniella squamata]
Length = 231
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
Query: 1 MGAVEGYR--IAGGPLGEVT-DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 57
+G E YR ++ P E+T + PGG FDPLGLA + ELK+KE+K+ RL+MF+
Sbjct: 132 VGLAEAYRTGLSDSPFEELTVGDVSPGGRFDPLGLAGSGD-LEELKIKELKHCRLSMFAW 190
Query: 58 FGFFVQAIVTGKGPLENLADHLADPVNNN 86
G QA+ T +GP+ N H+ADPV+ N
Sbjct: 191 LGCIFQALATQEGPIANWQAHVADPVHAN 219
>gi|304571358|dbj|BAJ15797.1| chlorophyll a-b binding protein, partial [Pieris japonica]
Length = 79
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QAI TG GP++NL
Sbjct: 13 TDVGYPGGLWFDPLGWGSGSPEKVLELRTKEIKNGRLAMLAVMGAWFQAIYTGTGPIDNL 72
Query: 76 ADHLADP 82
HLADP
Sbjct: 73 FAHLADP 79
>gi|255070349|ref|XP_002507256.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas sp. RCC299]
gi|226522531|gb|ACO68514.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas sp. RCC299]
Length = 254
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 1 MGAVEGYR--IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
+G+ E YR + P E+ + PGG FDPLG A+ + ELKVKE+K+ RL+MF+
Sbjct: 156 VGSAECYRTGLFENPFPELELSVTPGGRFDPLGFAEAGD-LEELKVKELKHCRLSMFAWL 214
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNN 86
G QA+ T +GP+ N H+ADPV+ N
Sbjct: 215 GCIFQALATQEGPIANWQAHVADPVHAN 242
>gi|116783276|gb|ABK22868.1| unknown [Picea sitchensis]
Length = 233
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG PE EL+ KEIKNGRLAM S+ G + QA TG GP++NL
Sbjct: 155 TDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLSVMGAWFQAEYTGTGPIDNL 214
Query: 76 ADHLADP 82
HLADP
Sbjct: 215 LAHLADP 221
>gi|356519222|ref|XP_003528272.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
[Glycine max]
Length = 263
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 19 DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
+P YPGG +PLGLA D + K+KEIKNGRLAM +M G FVQA VT GP++NL +
Sbjct: 185 EPGYPGGPLLNPLGLAKDINNAHDWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNLVE 244
Query: 78 HLADPVNNN 86
HL++P +
Sbjct: 245 HLSNPWHKT 253
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 70
FDPLGLA+DP + E+ + R AM +FG V ++ G
Sbjct: 77 FDPLGLAEDPASLRWYVQAELVHCRFAMLGVFGILVTDLLRVTG 120
>gi|384246844|gb|EIE20333.1| light-harvesting chlorophyll a/b-binding protein Lhca2 [Coccomyxa
subellipsoidea C-169]
Length = 246
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 51/79 (64%), Gaps = 10/79 (12%)
Query: 19 DPLYPGGSFDPL---GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
DP YPGG F L G +D ELK KE+KNGRLAM ++FG+ QA++T +GP +NL
Sbjct: 170 DPSYPGGQFFNLFNLGKSD----LKELKTKELKNGRLAMLAVFGYGAQAVITAEGPFKNL 225
Query: 76 ADHLADPVNNNAWAYATNF 94
DHL+DP +N TNF
Sbjct: 226 TDHLSDPTGHNI---LTNF 241
>gi|304571344|dbj|BAJ15790.1| chlorophyll a-b binding protein, partial [Pieris nana]
gi|304571346|dbj|BAJ15791.1| chlorophyll a-b binding protein, partial [Pieris nana]
gi|304571348|dbj|BAJ15792.1| chlorophyll a-b binding protein, partial [Pieris nana]
gi|304571352|dbj|BAJ15794.1| chlorophyll a-b binding protein, partial [Pieris nana]
gi|304571354|dbj|BAJ15795.1| chlorophyll a-b binding protein, partial [Pieris nana]
gi|304571356|dbj|BAJ15796.1| chlorophyll a-b binding protein, partial [Pieris nana]
Length = 79
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QAI TG GP++NL
Sbjct: 13 TDVGYPGGLWFDPLGWGSGSPEKVMELRTKEIKNGRLAMLAVVGAWFQAIYTGTGPIDNL 72
Query: 76 ADHLADP 82
HLADP
Sbjct: 73 FAHLADP 79
>gi|147841900|emb|CAN72005.1| hypothetical protein VITISV_033663 [Vitis vinifera]
Length = 272
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG P+ EL+ KEIKNGRLAM ++ G + QAI TG GP++NL
Sbjct: 194 TDVGYPGGLWFDPLGWGSGSPDKIKELRTKEIKNGRLAMLAVMGAWFQAIYTGTGPIDNL 253
Query: 76 ADHLADP 82
HLADP
Sbjct: 254 FAHLADP 260
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
FDPLGL DPE + EI + R AM G F+ +T G L + + A
Sbjct: 90 FDPLGLGSDPETLKWMVQSEIVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTA 143
>gi|302848571|ref|XP_002955817.1| hypothetical protein VOLCADRAFT_106964 [Volvox carteri f.
nagariensis]
gi|300258785|gb|EFJ43018.1| hypothetical protein VOLCADRAFT_106964 [Volvox carteri f.
nagariensis]
Length = 257
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD 81
YPGG FDPLG + EL+ KEIKNGRLAM + GF +QA TGKGPL L+ HL++
Sbjct: 164 YPGGIFDPLGFSKG--NLKELQTKEIKNGRLAMVAYMGFVLQAQATGKGPLAALSAHLSN 221
Query: 82 PVNNN 86
P NN
Sbjct: 222 PFGNN 226
>gi|388510254|gb|AFK43193.1| unknown [Lotus japonicus]
Length = 213
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 16 EVTDPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 74
E +P YPGG +PLGLA D + E K+KEIKNGRLAM ++ G FVQA VT GP++N
Sbjct: 132 EGLEPGYPGGPLLNPLGLAKDIKNARESKLKEIKNGRLAMVAILGIFVQASVTHVGPIDN 191
Query: 75 LADHLADPVNNNA 87
L +HL++P +
Sbjct: 192 LVEHLSNPWHKTV 204
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 70
FDPLGL +DPE+ E+ + R AM +FG V ++ G
Sbjct: 27 FDPLGLGEDPESLRWYVQAELVHARFAMLGVFGILVTDLLRVTG 70
>gi|159474444|ref|XP_001695335.1| light-harvesting protein of photosystem I [Chlamydomonas
reinhardtii]
gi|158275818|gb|EDP01593.1| light-harvesting protein of photosystem I [Chlamydomonas
reinhardtii]
Length = 239
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
M A EG R G+ +YPGG+FDPLG A D ELK+KEIKNGRLAM + GF
Sbjct: 138 MAAAEGQR------GDAGGVVYPGGAFDPLGFAKDSSKSGELKLKEIKNGRLAMVAFLGF 191
Query: 61 FVQAIVTGKGPLENLAD 77
Q TGKGP+ A
Sbjct: 192 VAQHAATGKGPIAAWAS 208
>gi|168046799|ref|XP_001775860.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672867|gb|EDQ59399.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 227
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Query: 14 LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
LG +P YPGG F+ LG + + ELK+KEIKNGRLAM ++ G+F+QAI TG GP
Sbjct: 146 LGGSGNPAYPGGPIFNFLGFGKNEKELKELKLKEIKNGRLAMMAVLGYFIQAIFTGVGPF 205
Query: 73 ENLADHLADPVNNNA 87
+NL DHLADPV+NN
Sbjct: 206 QNLLDHLADPVHNNV 220
>gi|20792|emb|CAA41406.1| Type II chlorophyll a /b-binding protein [Pinus sylvestris]
Length = 278
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GP++NL
Sbjct: 200 TDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNL 259
Query: 76 ADHLADP 82
HLADP
Sbjct: 260 LAHLADP 266
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 23/48 (47%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 74
FDPLGL DPE + E+ + R AM G F+ + T G L
Sbjct: 96 FDPLGLGSDPETLKWMVQAELVHCRWAMLGAAGIFIPELCTKLGILNT 143
>gi|412985627|emb|CCO19073.1| unknown [Bathycoccus prasinos]
Length = 291
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 42/68 (61%)
Query: 19 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 78
DP+ PGG D +A P+ LKVKEIKNGRLAM +M G FVQ TG+GP N H
Sbjct: 211 DPINPGGPLDFYNVAATPQDLEILKVKEIKNGRLAMIAMLGVFVQGATTGEGPAANWGKH 270
Query: 79 LADPVNNN 86
+ADP N
Sbjct: 271 VADPFGYN 278
>gi|224057740|ref|XP_002299309.1| light-harvesting complex I protein Lhca2 [Populus trichocarpa]
gi|222846567|gb|EEE84114.1| light-harvesting complex I protein Lhca2 [Populus trichocarpa]
Length = 272
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP++NL
Sbjct: 194 TDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL 253
Query: 76 ADHLADP 82
HLADP
Sbjct: 254 FAHLADP 260
>gi|87313175|gb|ABD37884.1| light-harvesting chlorophyll-a/b binding protein Lhca5.2
[Mesostigma viride]
gi|145079736|tpg|DAA05927.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca9 [Mesostigma viride]
Length = 225
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 43/60 (71%), Gaps = 5/60 (8%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 86
FDPLG+ E+ VKE+KNGRLAMF+ GF VQA+VT +GP+ NL H+ADP NNN
Sbjct: 157 FDPLGMNSK-----EMMVKEVKNGRLAMFAWCGFMVQALVTREGPVTNLEKHIADPFNNN 211
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG-FFVQAIVTGKGPLENLADHLADPV 83
+DP+GLA DP+ A E NGR AM + G F A+ G P ++ L P+
Sbjct: 62 YDPIGLATDPDRLAWFVEAERTNGRWAMAGVAGILFTDALHIGSAPWFSIGAELESPI 119
>gi|19577|emb|CAA49272.1| chlorophyll a/b/c binding protein precursor [Mantoniella squamata]
Length = 231
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 4/89 (4%)
Query: 1 MGAVEGYR--IAGGPLGEVT-DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 57
+G E YR + P E+T + PGG FDPLGLA+ + ELK+KE+K+ RL+MF+
Sbjct: 132 VGLAEAYRTGLTDSPFEELTVGDVSPGGRFDPLGLAESGD-LEELKIKELKHCRLSMFAW 190
Query: 58 FGFFVQAIVTGKGPLENLADHLADPVNNN 86
G Q + T +GP+ N H+ADPV+ N
Sbjct: 191 LGCIFQGLATQEGPIANWQAHVADPVHAN 219
>gi|302829360|ref|XP_002946247.1| hypothetical protein VOLCADRAFT_108856 [Volvox carteri f.
nagariensis]
gi|300269062|gb|EFJ53242.1| hypothetical protein VOLCADRAFT_108856 [Volvox carteri f.
nagariensis]
Length = 256
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 19 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 78
+P YPGG F P D AELKVKEIKNGRLAM + GF + A VTGKGP+ L +H
Sbjct: 152 EPGYPGGVFAPFIPGD----LAELKVKEIKNGRLAMLAFVGFVMAAQVTGKGPIAALQEH 207
Query: 79 LADPVNNNAWAYATNFVPGK 98
LADP ++ A VPG+
Sbjct: 208 LADPWGTTIFSKAA-VVPGQ 226
>gi|308799535|ref|XP_003074548.1| prasinophyte specific LHC (IC) [Ostreococcus tauri]
gi|63029287|gb|AAY27542.1| chloroplast prasinophyte chlorophyll a/b-binding protein Lhcp1
[Ostreococcus tauri]
gi|116000719|emb|CAL50399.1| prasinophyte specific LHC (IC), partial [Ostreococcus tauri]
Length = 210
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
Query: 1 MGAVEGYRIA--GGPLGEVTD-PLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 57
+G+ E YR P E+T + PGG FDPLG A+ + ELK+KE+K+ RLAMF+
Sbjct: 111 VGSAECYRTGLFENPFPELTQGDVTPGGRFDPLGFAEAGD-LEELKIKELKHSRLAMFAW 169
Query: 58 FGFFVQAIVTGKGPLENLADHLADPVNNN 86
G +QA+ T +GP+ N H+ADP++ N
Sbjct: 170 LGCIMQALATQEGPIANWTAHVADPIHAN 198
>gi|356530445|ref|XP_003533791.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Glycine max]
Length = 260
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 60/109 (55%), Gaps = 16/109 (14%)
Query: 1 MGAVEGYRIAG----------GPLGEVTDPL----YPGG-SFDPLGLAD-DPEAFAELKV 44
MG VEG R A + VT+P YPGG FDP+ PE L+
Sbjct: 152 MGWVEGRRWADIVNPGSVDIEPKVPHVTNPKPDVGYPGGLWFDPMMWGRGSPEPVMVLRT 211
Query: 45 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 93
KEIKNGRLAM + GF+ QAI TG+GP+ENL HLADP + N ++ T
Sbjct: 212 KEIKNGRLAMLAFVGFWFQAIYTGEGPIENLMAHLADPGHCNIFSAFTR 260
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 76
FDPLGL DPE E+ + R AM ++FG V ++ G +EN +
Sbjct: 79 FDPLGLGSDPELLKWFAQAELMHSRWAMLAVFGILVPELLERIGYIENFS 128
>gi|255547714|ref|XP_002514914.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223545965|gb|EEF47468.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 270
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP++NL
Sbjct: 192 TDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL 251
Query: 76 ADHLADP 82
HLADP
Sbjct: 252 FAHLADP 258
>gi|297819360|ref|XP_002877563.1| chlorophyll a/b-binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297323401|gb|EFH53822.1| chlorophyll a/b-binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 252
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 46/74 (62%), Gaps = 7/74 (9%)
Query: 13 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
P GEV YPGG F+PL A EA K KEI NGRLAM + GF VQ VTGKGP
Sbjct: 180 PKGEVG---YPGGIFNPLNFAPTLEA----KEKEIANGRLAMLAFLGFVVQHNVTGKGPF 232
Query: 73 ENLADHLADPVNNN 86
ENL HL+DP +N
Sbjct: 233 ENLLQHLSDPWHNT 246
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 70
FDPLGLA+DPE E+ NGR AM + G + + T G
Sbjct: 78 FDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKLG 121
>gi|356559462|ref|XP_003548018.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
isoform 1 [Glycine max]
gi|255645717|gb|ACU23352.1| unknown [Glycine max]
Length = 270
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP++NL
Sbjct: 192 TDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL 251
Query: 76 ADHLADP 82
HLADP
Sbjct: 252 FAHLADP 258
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
FDPLGLA DPE+ E+ + R AM G F+ +T G L + + A
Sbjct: 88 FDPLGLASDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTA 141
>gi|224072580|ref|XP_002303791.1| light-harvesting complex I protein Lhca2 [Populus trichocarpa]
gi|222841223|gb|EEE78770.1| light-harvesting complex I protein Lhca2 [Populus trichocarpa]
Length = 269
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP++NL
Sbjct: 191 TDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL 250
Query: 76 ADHLADP 82
HLADP
Sbjct: 251 FAHLADP 257
>gi|118487549|gb|ABK95601.1| unknown [Populus trichocarpa]
Length = 269
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP++NL
Sbjct: 191 TDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL 250
Query: 76 ADHLADP 82
HLADP
Sbjct: 251 FAHLADP 257
>gi|145079153|tpg|DAA05901.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca6 [Acetabularia acetabulum]
Length = 201
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 46/63 (73%), Gaps = 2/63 (3%)
Query: 22 YPGGSF-DPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
YPGG+F DP G + E++ L+VKEI NGRLAM +M GF+ Q TGKGP++NL DH+
Sbjct: 134 YPGGTFFDPFGFSKGSEESYKTLQVKEIANGRLAMVAMVGFWAQYAATGKGPVDNLFDHI 193
Query: 80 ADP 82
ADP
Sbjct: 194 ADP 196
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
FDPL L DP+ A ++ E+ + R AM + G V A++T G +
Sbjct: 22 FDPLSLGSDPDMLAWMRQAELMHCRWAMMGVAGILVPALLTKLGAM 67
>gi|356520198|ref|XP_003528751.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
isoform 1 [Glycine max]
Length = 270
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP++NL
Sbjct: 192 TDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL 251
Query: 76 ADHLADP 82
HLADP
Sbjct: 252 FAHLADP 258
>gi|168066707|ref|XP_001785275.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663145|gb|EDQ49927.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 334
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/56 (58%), Positives = 41/56 (73%)
Query: 42 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
+ VKEIKNGRLA+ S+ GF Q IVTGKGP++NL DH+ DP NN A+AT+ G
Sbjct: 1 MSVKEIKNGRLALVSLLGFGAQGIVTGKGPVQNLIDHVTDPFANNLLAFATSSALG 56
>gi|145350546|ref|XP_001419664.1| chlorophyll a/b binding, possibly photosystem I light harvesting
complex [Ostreococcus lucimarinus CCE9901]
gi|144579896|gb|ABO97957.1| chlorophyll a/b binding, possibly photosystem I light harvesting
complex [Ostreococcus lucimarinus CCE9901]
Length = 235
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 42/65 (64%)
Query: 18 TDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
TD YP G FD G A D + AELK+KEIKNGRLAM + G Q + TG GP+ENL
Sbjct: 164 TDVGYPKGLFDKFGWAKDEKTTAELKLKEIKNGRLAMLAFLGICAQYVQTGVGPVENLFS 223
Query: 78 HLADP 82
H+ +P
Sbjct: 224 HMGNP 228
>gi|118487538|gb|ABK95596.1| unknown [Populus trichocarpa]
Length = 269
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP++NL
Sbjct: 191 TDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL 250
Query: 76 ADHLADP 82
HLADP
Sbjct: 251 FAHLADP 257
>gi|164612849|gb|ABY63668.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 262
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GP++NL
Sbjct: 184 TDVGYPGGLWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNL 243
Query: 76 ADHLADPVNNN 86
HLADP + N
Sbjct: 244 FAHLADPGHAN 254
>gi|302830496|ref|XP_002946814.1| hypothetical protein VOLCADRAFT_45832 [Volvox carteri f.
nagariensis]
gi|300267858|gb|EFJ52040.1| hypothetical protein VOLCADRAFT_45832 [Volvox carteri f.
nagariensis]
Length = 227
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 22 YPGG-SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
YPGG F+PLGL + P A E++ EI++GRLAM + G+ QA+VTG+GP +N HL
Sbjct: 153 YPGGLMFNPLGLGEKPAAMREMQQAEIRHGRLAMLACLGYAAQAVVTGRGPYDNWNRHLE 212
Query: 81 DPVNNNAWAYATNFV 95
+P NN + N +
Sbjct: 213 NPEENNVLSLLGNVL 227
>gi|116779438|gb|ABK21282.1| unknown [Picea sitchensis]
gi|116782291|gb|ABK22450.1| unknown [Picea sitchensis]
gi|116784092|gb|ABK23211.1| unknown [Picea sitchensis]
gi|116786476|gb|ABK24121.1| unknown [Picea sitchensis]
gi|116791795|gb|ABK26112.1| unknown [Picea sitchensis]
gi|116791985|gb|ABK26188.1| unknown [Picea sitchensis]
gi|116792462|gb|ABK26376.1| unknown [Picea sitchensis]
gi|148908663|gb|ABR17439.1| unknown [Picea sitchensis]
gi|224284338|gb|ACN39904.1| unknown [Picea sitchensis]
gi|224284452|gb|ACN39960.1| unknown [Picea sitchensis]
gi|224284659|gb|ACN40062.1| unknown [Picea sitchensis]
gi|224284741|gb|ACN40101.1| unknown [Picea sitchensis]
gi|224285484|gb|ACN40463.1| unknown [Picea sitchensis]
Length = 278
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GP++NL
Sbjct: 200 TDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNL 259
Query: 76 ADHLADP 82
HLADP
Sbjct: 260 LAHLADP 266
>gi|356520200|ref|XP_003528752.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
isoform 2 [Glycine max]
Length = 281
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP++NL
Sbjct: 203 TDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL 262
Query: 76 ADHLADP 82
HLADP
Sbjct: 263 FAHLADP 269
>gi|18376587|emb|CAC81065.1| putative chlorophyll A-B binding protein of LHCI type II precursor
[Picea abies]
Length = 278
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GP++NL
Sbjct: 200 TDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNL 259
Query: 76 ADHLADP 82
HLADP
Sbjct: 260 LAHLADP 266
>gi|356559464|ref|XP_003548019.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
isoform 2 [Glycine max]
Length = 281
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP++NL
Sbjct: 203 TDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL 262
Query: 76 ADHLADP 82
HLADP
Sbjct: 263 FAHLADP 269
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
FDPLGLA DPE+ E+ + R AM G F+ +T G L + + A
Sbjct: 99 FDPLGLASDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTA 152
>gi|211953347|gb|ACJ13835.1| chlorophyll binding protein [Helianthus annuus]
Length = 116
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG P EL+ KEIKNGRLAM ++ G + QAI TG GP++NL
Sbjct: 39 TDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQAIYTGTGPIDNL 98
Query: 76 ADHLADP 82
HLADP
Sbjct: 99 FAHLADP 105
>gi|30692874|ref|NP_190331.3| chlorophyll a-b binding protein 4 [Arabidopsis thaliana]
gi|115385|sp|P27521.1|CA4_ARATH RecName: Full=Chlorophyll a-b binding protein 4, chloroplastic;
AltName: Full=LHCI type III CAB-4; Flags: Precursor
gi|166646|gb|AAA32760.1| light-harvesting chlorophyll a/b binding protein [Arabidopsis
thaliana]
gi|6522530|emb|CAB61973.1| CHLOROPHYLL A-B BINDING PROTEIN 4 PRECURSOR homolog [Arabidopsis
thaliana]
gi|20260362|gb|AAM13079.1| chlorophyll A-B binding protein 4 precursor homolog [Arabidopsis
thaliana]
gi|21554365|gb|AAM63472.1| chlorophyll a-b binding protein 4 precursor homolog [Arabidopsis
thaliana]
gi|23197770|gb|AAN15412.1| chlorophyll A-B binding protein 4 precursor homolog [Arabidopsis
thaliana]
gi|332644764|gb|AEE78285.1| chlorophyll a-b binding protein 4 [Arabidopsis thaliana]
Length = 251
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 46/74 (62%), Gaps = 7/74 (9%)
Query: 13 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
P GEV YPGG F+PL A EA K KE+ NGRLAM + GF VQ VTGKGP
Sbjct: 179 PKGEVG---YPGGIFNPLNFAPTQEA----KEKELANGRLAMLAFLGFVVQHNVTGKGPF 231
Query: 73 ENLADHLADPVNNN 86
ENL HL+DP +N
Sbjct: 232 ENLLQHLSDPWHNT 245
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 70
FDPLGLA+DPE E+ NGR AM + G + + T G
Sbjct: 77 FDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIG 120
>gi|19575|emb|CAA49271.1| chlorophyll a/b/c binding protein precursor [Mantoniella squamata]
Length = 231
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
Query: 1 MGAVEGYR--IAGGPLGEVT-DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 57
+G E YR ++ P E+T + PGG FD LGLA+ + ELK+KE+K+ RL+MF+
Sbjct: 132 VGLAEAYRTGLSDSPFEELTVGDVSPGGRFDSLGLAESGD-LEELKIKELKHCRLSMFAW 190
Query: 58 FGFFVQAIVTGKGPLENLADHLADPVNNN 86
G QA+ T +GP+ N H+ADPV+ N
Sbjct: 191 LGCIFQALATQEGPIANWQAHVADPVHAN 219
>gi|145355794|ref|XP_001422134.1| photosystem I light harvesting complex, chlorophyll a/b binding
[Ostreococcus lucimarinus CCE9901]
gi|144582374|gb|ABP00451.1| photosystem I light harvesting complex, chlorophyll a/b binding
[Ostreococcus lucimarinus CCE9901]
Length = 281
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 14 LGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 73
LG +P YPGG F+ +G A+++VKEIKNGRLAM + F QA++TG+GP++
Sbjct: 197 LGGSGEPAYPGGFFNIMG--QGKSDMAKMRVKEIKNGRLAMMACFACGAQAVMTGEGPVK 254
Query: 74 NLADHLADPVNNN 86
NL DH++DP +N
Sbjct: 255 NLIDHVSDPFGHN 267
>gi|449435085|ref|XP_004135326.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
[Cucumis sativus]
gi|449529174|ref|XP_004171576.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
[Cucumis sativus]
Length = 271
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP++NL
Sbjct: 193 TDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL 252
Query: 76 ADHLADP 82
HLADP
Sbjct: 253 FAHLADP 259
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
FDPLGLA DPE+ + E+ + R AM G F+ +T G L + + A
Sbjct: 89 FDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTA 142
>gi|211953323|gb|ACJ13823.1| chlorophyll binding protein [Helianthus annuus]
gi|211953325|gb|ACJ13824.1| chlorophyll binding protein [Helianthus annuus]
gi|211953327|gb|ACJ13825.1| chlorophyll binding protein [Helianthus annuus]
gi|211953329|gb|ACJ13826.1| chlorophyll binding protein [Helianthus annuus]
gi|211953331|gb|ACJ13827.1| chlorophyll binding protein [Helianthus annuus]
gi|211953333|gb|ACJ13828.1| chlorophyll binding protein [Helianthus annuus]
gi|211953335|gb|ACJ13829.1| chlorophyll binding protein [Helianthus annuus]
gi|211953337|gb|ACJ13830.1| chlorophyll binding protein [Helianthus annuus]
gi|211953339|gb|ACJ13831.1| chlorophyll binding protein [Helianthus annuus]
gi|211953341|gb|ACJ13832.1| chlorophyll binding protein [Helianthus annuus]
gi|211953349|gb|ACJ13836.1| chlorophyll binding protein [Helianthus annuus]
gi|211953351|gb|ACJ13837.1| chlorophyll binding protein [Helianthus annuus]
gi|211953353|gb|ACJ13838.1| chlorophyll binding protein [Helianthus annuus]
gi|211953355|gb|ACJ13839.1| chlorophyll binding protein [Helianthus annuus]
gi|211953357|gb|ACJ13840.1| chlorophyll binding protein [Helianthus annuus]
gi|211953359|gb|ACJ13841.1| chlorophyll binding protein [Helianthus annuus]
gi|211953361|gb|ACJ13842.1| chlorophyll binding protein [Helianthus annuus]
gi|211953363|gb|ACJ13843.1| chlorophyll binding protein [Helianthus annuus]
gi|211953365|gb|ACJ13844.1| chlorophyll binding protein [Helianthus annuus]
gi|211953367|gb|ACJ13845.1| chlorophyll binding protein [Helianthus annuus]
gi|211953369|gb|ACJ13846.1| chlorophyll binding protein [Helianthus annuus]
gi|211953371|gb|ACJ13847.1| chlorophyll binding protein [Helianthus annuus]
gi|211953373|gb|ACJ13848.1| chlorophyll binding protein [Helianthus annuus]
gi|211953375|gb|ACJ13849.1| chlorophyll binding protein [Helianthus annuus]
gi|211953377|gb|ACJ13850.1| chlorophyll binding protein [Helianthus petiolaris]
gi|211953379|gb|ACJ13851.1| chlorophyll binding protein [Helianthus petiolaris]
Length = 116
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG P EL+ KEIKNGRLAM ++ G + QAI TG GP++NL
Sbjct: 39 TDVGYPGGLWFDPLGWGTGSPAKLKELRTKEIKNGRLAMLAVMGAWFQAIYTGTGPIDNL 98
Query: 76 ADHLADP 82
HLADP
Sbjct: 99 FAHLADP 105
>gi|303324979|pdb|3LW5|2 Chain 2, Improved Model Of Plant Photosystem I
Length = 176
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG P+ EL+ KEIKNGRLAM ++ G + Q I TG GP++NL
Sbjct: 98 TDVGYPGGLWFDPLGWGSASPQKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL 157
Query: 76 ADHLADP 82
HLADP
Sbjct: 158 FAHLADP 164
>gi|307106821|gb|EFN55066.1| hypothetical protein CHLNCDRAFT_35848 [Chlorella variabilis]
Length = 219
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 53/95 (55%), Gaps = 9/95 (9%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
M E +R A P V YPGG FDP G++ + EL+ KEIKNGRLAM + GF
Sbjct: 129 MAGAESFRGAAEPEKRV----YPGGPFDPAGMSKGNQD--ELRTKEIKNGRLAMIACLGF 182
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFV 95
Q TG PLE L HLA+P+ N +ATN V
Sbjct: 183 VAQHAATGASPLEALGAHLANPMVAN---FATNGV 214
>gi|87313217|gb|ABD37905.1| light-harvesting chlorophyll-a/b binding protein Lhca3
[Chlamydomonas incerta]
Length = 245
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD 81
YPGG FDP G + F EL+ KEIKNGRLAM + F +QA TGKGPL L+ HL++
Sbjct: 152 YPGGIFDPFGFSKG--DFKELQTKEIKNGRLAMIAYMAFILQAQATGKGPLAALSAHLSN 209
Query: 82 PVNNN 86
P NN
Sbjct: 210 PFGNN 214
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 66
+DPLGL DP A + E+++ R AM + G VQ IV
Sbjct: 43 WDPLGLGADPTALKWYRQSELQHARWAMLGVAGVLVQEIV 82
>gi|11762172|gb|AAG40364.1|AF325012_1 AT3g47470 [Arabidopsis thaliana]
Length = 148
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 46/74 (62%), Gaps = 7/74 (9%)
Query: 13 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
P GEV YPGG F+PL A EA K KE+ NGRLAM + GF VQ VTGKGP
Sbjct: 76 PKGEVG---YPGGIFNPLNFAPTQEA----KEKELANGRLAMLAFLGFVVQHNVTGKGPF 128
Query: 73 ENLADHLADPVNNN 86
ENL HL+DP +N
Sbjct: 129 ENLLQHLSDPWHNT 142
>gi|356556398|ref|XP_003546513.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Glycine max]
Length = 260
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 60/109 (55%), Gaps = 16/109 (14%)
Query: 1 MGAVEGYRIAG----------GPLGEVTDPL----YPGG-SFDPLGLAD-DPEAFAELKV 44
MG VEG R A + +T+P YPGG FDP+ PE L+
Sbjct: 152 MGWVEGRRWADMVNPGSVDIEPKVPHITNPKPDVGYPGGLWFDPMMWGRGSPEPVMVLRT 211
Query: 45 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 93
KEIKNGRLAM + GF+ QAI TG+GP+ENL HLADP + N ++ T
Sbjct: 212 KEIKNGRLAMLAFVGFWFQAIYTGEGPIENLMAHLADPGHCNIFSAFTR 260
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 76
FDPLGL DPE E+ + R AM ++FG V ++ G +EN +
Sbjct: 79 FDPLGLGSDPELLKWFAQAELMHARWAMLAVFGILVPELLEKIGYIENFS 128
>gi|551047|emb|CAA55864.1| type II LHCI [Lolium temulentum]
Length = 253
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG + PE EL+ KEIKNGRLAM ++ G + QA TG GP++NL
Sbjct: 175 TDVGYPGGLWFDPLGYGNGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNL 234
Query: 76 ADHLADP 82
HLADP
Sbjct: 235 FAHLADP 241
>gi|358346846|ref|XP_003637475.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355503410|gb|AES84613.1| Chlorophyll a-b binding protein [Medicago truncatula]
Length = 294
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG P+ EL+ KEIKNGRLAM ++ G + Q I TG GP++NL
Sbjct: 216 TDVGYPGGLWFDPLGWGSGSPQKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL 275
Query: 76 ADHLADP 82
HLADP
Sbjct: 276 FAHLADP 282
>gi|602359|emb|CAA57492.1| Type II chlorophyll a/b binding protein from photosystem I [Pisum
sativum]
Length = 269
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG P+ EL+ KEIKNGRLAM ++ G + Q I TG GP++NL
Sbjct: 191 TDVGYPGGLWFDPLGWGSASPQKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL 250
Query: 76 ADHLADP 82
HLADP
Sbjct: 251 FAHLADP 257
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 26/54 (48%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
FDPLGL DPE+ E+ + R AM G F+ +T G L + + A
Sbjct: 87 FDPLGLGSDPESLRWNVQAELVHSRWAMLGAAGIFIPEFLTKLGILNTPSWYTA 140
>gi|145078859|tpg|DAA05887.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca2 [Euglena gracilis]
Length = 1036
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 47/68 (69%), Gaps = 7/68 (10%)
Query: 19 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 78
D YPG FDPL L DD E K+KEIKNGRLAM +M G VQ+ +TGK PL NL++H
Sbjct: 265 DQSYPG--FDPLRLTDD-----ETKLKEIKNGRLAMTAMLGLEVQSHITGKSPLVNLSEH 317
Query: 79 LADPVNNN 86
L++P + N
Sbjct: 318 LSNPASVN 325
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 49/86 (56%), Gaps = 10/86 (11%)
Query: 4 VEGYRIAGGPLG---EVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
+E +R GG L E D YPG FDPL L + K EIKNGRLAM MFG
Sbjct: 808 LEYWRGNGGFLWNDEETVDQSYPG--FDPLNLTTE-----YTKEAEIKNGRLAMIGMFGL 860
Query: 61 FVQAIVTGKGPLENLADHLADPVNNN 86
VQ+ VTGK P+ NL DHL+ P+ N
Sbjct: 861 EVQSHVTGKSPITNLIDHLSHPLTAN 886
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 10/82 (12%)
Query: 7 YRIAGGPLGEVTDP--LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 64
+ +A G + E +DP +YPG FDPL L D K EIKNGRLA+ ++ GF VQ
Sbjct: 440 FEVARG-VKENSDPTTIYPG--FDPLNLTTD-----YTKEAEIKNGRLALTALLGFEVQR 491
Query: 65 IVTGKGPLENLADHLADPVNNN 86
V G PL NLA+HL P+ N
Sbjct: 492 HVVGGSPLANLAEHLQQPLQRN 513
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 19 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 78
D YPG FDPL L D + E+KNGRLA+ ++ G Q + TG+ PL NL+ H
Sbjct: 641 DRSYPG--FDPLNLTTD-----YTRAAEVKNGRLALTAVAGLTAQYLATGESPLANLSAH 693
Query: 79 LADPVNNN 86
LA+P+ N
Sbjct: 694 LANPIGAN 701
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 22 YPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 76
+PG FDPLGL+ DP F +++ E+ +GRLAM + G V + +GP +L+
Sbjct: 174 FPGDRGFDPLGLSTDPVVFERMRISEVFHGRLAMLGIVGCIVPELFFSQGPWFDLS 229
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 70
FDPL LA DP+ +A ++V E+ +GRLAM M G V ++ GKG
Sbjct: 557 FDPLNLAADPDVYARMRVAEVFHGRLAMLCMVGCIVPELL-GKG 599
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 70
FDPL LA DP+ +A ++V E+ +GRLAM M G V ++ GKG
Sbjct: 931 FDPLNLAADPDVYARMRVAEVFHGRLAMLCMVGCIVPELL-GKG 973
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 62
FDP GLA DP+ F +++ E+ +GRLAM ++ G V
Sbjct: 372 FDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALV 407
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 17 VTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 66
+T Y FDP GLA DP F ++V E+ + RL+M ++ G V ++
Sbjct: 731 LTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELL 780
>gi|388508808|gb|AFK42470.1| unknown [Lotus japonicus]
Length = 259
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 22 YPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
YPGG FDP+ PE L+ KEIKNGRLAM + GF+ QAI TG+GP+ENL HL
Sbjct: 185 YPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGQGPIENLMAHL 244
Query: 80 ADPVNNNAWAYATN 93
ADP + N ++ T+
Sbjct: 245 ADPGHCNIFSAFTS 258
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA-------DHL 79
FDP+GL DPE L E+ + R AM + G + ++ G +EN + ++
Sbjct: 77 FDPIGLGSDPELLKWLAQAELMHARWAMLGVSGILIPELLEKMGYVENYSWYEAGTQEYF 136
Query: 80 ADPVN 84
ADP
Sbjct: 137 ADPTT 141
>gi|255071911|ref|XP_002499630.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas sp. RCC299]
gi|255071913|ref|XP_002499631.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas sp. RCC299]
gi|255072873|ref|XP_002500111.1| prasinophyte specific chlorophyll a/b-binding protein [Micromonas
sp. RCC299]
gi|255080166|ref|XP_002503663.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas sp. RCC299]
gi|226514892|gb|ACO60888.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas sp. RCC299]
gi|226514893|gb|ACO60889.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas sp. RCC299]
gi|226515373|gb|ACO61369.1| prasinophyte specific chlorophyll a/b-binding protein [Micromonas
sp. RCC299]
gi|226518930|gb|ACO64921.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas sp. RCC299]
Length = 231
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 16/95 (16%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLY---------PGGSFDPLGLADDPEAFAELKVKEIKNGR 51
+G E YR ++DP++ PGG FDPLGLA+ + ELK+KE+K+ R
Sbjct: 132 VGLAEAYRTG------LSDPVFDELTVGDVSPGGRFDPLGLAESGD-LEELKIKELKHCR 184
Query: 52 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 86
L+MF+ G +Q + T +GP+ N H+ADPV+ N
Sbjct: 185 LSMFAWLGCIMQGLATQEGPIANWQAHVADPVHAN 219
>gi|303283632|ref|XP_003061107.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas pusilla CCMP1545]
gi|226457458|gb|EEH54757.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas pusilla CCMP1545]
Length = 232
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 16/95 (16%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLY---------PGGSFDPLGLADDPEAFAELKVKEIKNGR 51
+G E YR ++DP++ PGG FDPLGLA+ + ELK+KE+K+ R
Sbjct: 133 VGLAEAYRTG------LSDPVFDELTVGDVSPGGRFDPLGLAESGD-LEELKIKELKHCR 185
Query: 52 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 86
L+MF+ G +Q + T +GP+ N H+ADPV+ N
Sbjct: 186 LSMFAWLGCIMQGLATQEGPIANWQAHVADPVHAN 220
>gi|388515647|gb|AFK45885.1| unknown [Lotus japonicus]
Length = 269
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG P+ EL+ KEIKNGRLAM ++ G + Q I TG GP++NL
Sbjct: 191 TDVGYPGGLWFDPLGWGSGSPQKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL 250
Query: 76 ADHLADP 82
HLADP
Sbjct: 251 FAHLADP 257
>gi|115472983|ref|NP_001060090.1| Os07g0577600 [Oryza sativa Japonica Group]
gi|34393511|dbj|BAC83072.1| putative photosystem I antenna protein [Oryza sativa Japonica
Group]
gi|113611626|dbj|BAF22004.1| Os07g0577600 [Oryza sativa Japonica Group]
gi|125558916|gb|EAZ04452.1| hypothetical protein OsI_26600 [Oryza sativa Indica Group]
gi|125600834|gb|EAZ40410.1| hypothetical protein OsJ_24861 [Oryza sativa Japonica Group]
gi|215678915|dbj|BAG96345.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215679008|dbj|BAG96438.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215679048|dbj|BAG96478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215686399|dbj|BAG87660.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737439|dbj|BAG96569.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737698|dbj|BAG96828.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737734|dbj|BAG96864.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767334|dbj|BAG99562.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 263
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GP++NL
Sbjct: 185 TDVGYPGGLWFDPLGWGTGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNL 244
Query: 76 ADHLADP 82
HLADP
Sbjct: 245 FAHLADP 251
>gi|145079879|tpg|DAA05945.1| TPA_inf: chloroplast light-harvesting complex protein precursor
Lhcp1.1 [Micromonas sp. CCMP490]
Length = 259
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Query: 1 MGAVEGYRIA--GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
+G+ E YR P E+ + PGG FDPLG A+ + ELK+KE+K+ RL+MF+
Sbjct: 161 VGSAECYRTGLFENPFPELELSVTPGGRFDPLGFAEAGD-LEELKIKELKHCRLSMFAWL 219
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNNN 86
G Q + T +GP+ N H+ADPV+ N
Sbjct: 220 GCIAQGLATQEGPIANWQAHVADPVHAN 247
>gi|303271155|ref|XP_003054939.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas pusilla CCMP1545]
gi|303272221|ref|XP_003055472.1| prasinophyte specific chlorophyll a/b-binding protein [Micromonas
pusilla CCMP1545]
gi|303277051|ref|XP_003057819.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas pusilla CCMP1545]
gi|303277801|ref|XP_003058194.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas pusilla CCMP1545]
gi|226460476|gb|EEH57770.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas pusilla CCMP1545]
gi|226460851|gb|EEH58145.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas pusilla CCMP1545]
gi|226462913|gb|EEH60191.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas pusilla CCMP1545]
gi|226463446|gb|EEH60724.1| prasinophyte specific chlorophyll a/b-binding protein [Micromonas
pusilla CCMP1545]
Length = 231
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 16/95 (16%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLY---------PGGSFDPLGLADDPEAFAELKVKEIKNGR 51
+G E YR ++DP++ PGG FDPLGLA+ + ELK+KE+K+ R
Sbjct: 132 VGLAEAYRTG------LSDPVFDELTVGDVSPGGRFDPLGLAESGD-LEELKIKELKHCR 184
Query: 52 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 86
L+MF+ G +Q + T +GP+ N H+ADPV+ N
Sbjct: 185 LSMFAWLGCIMQGLATQEGPIANWQAHVADPVHAN 219
>gi|358346569|ref|XP_003637339.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355503274|gb|AES84477.1| Chlorophyll a-b binding protein [Medicago truncatula]
Length = 268
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG P+ EL+ KEIKNGRLAM ++ G + Q I TG GP++NL
Sbjct: 190 TDVGYPGGLWFDPLGWGSGSPQKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL 249
Query: 76 ADHLADP 82
HLADP
Sbjct: 250 FAHLADP 256
>gi|388495628|gb|AFK35880.1| unknown [Medicago truncatula]
Length = 268
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG P+ EL+ KEIKNGRLAM ++ G + Q I TG GP++NL
Sbjct: 190 TDVGYPGGLWFDPLGWGSGSPQKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL 249
Query: 76 ADHLADP 82
HLADP
Sbjct: 250 FAHLADP 256
>gi|40736929|dbj|BAD06999.1| chlorophyll a/b-binding protein-like protein [Ipomoea nil]
Length = 51
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 38/43 (88%)
Query: 44 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 86
+KE+KNGRLAM ++ G+F+QA+VTG GP +NL DHLADPVNNN
Sbjct: 1 LKEVKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNN 43
>gi|194689644|gb|ACF78906.1| unknown [Zea mays]
Length = 156
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GP++NL
Sbjct: 78 TDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNL 137
Query: 76 ADHLADP 82
HLADP
Sbjct: 138 FAHLADP 144
>gi|159479992|ref|XP_001698070.1| light-harvesting protein of photosystem I [Chlamydomonas
reinhardtii]
gi|40714517|dbj|BAD06922.1| light-harvesting chlorophyll-a/b protein of photosystem I
[Chlamydomonas reinhardtii]
gi|158273869|gb|EDO99655.1| light-harvesting protein of photosystem I [Chlamydomonas
reinhardtii]
Length = 257
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD 81
YPGG F P D AELKVKEIKNGRLAM + GF + A VTGKGP+ L +HLAD
Sbjct: 156 YPGGVFAPFIPGD----LAELKVKEIKNGRLAMLAFVGFVMAAQVTGKGPIAALQEHLAD 211
Query: 82 PVNNNAWAYATNFVPGK 98
P ++ A VPG+
Sbjct: 212 PWGTTIFSKAA-VVPGQ 227
>gi|149242541|pdb|2O01|2 Chain 2, The Structure Of A Plant Photosystem I Supercomplex At 3.4
Angstrom Resolution
Length = 186
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG P+ EL+ KEIKNGRLAM ++ G + Q I TG GP++NL
Sbjct: 118 TDVGYPGGLWFDPLGWGSASPQKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL 177
Query: 76 ADHLADP 82
HLADP
Sbjct: 178 FAHLADP 184
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 74
FDPLGL+ DPE+ E+ + R AM G F+ +T G L
Sbjct: 14 FDPLGLSSDPESLRWNVQAELVHSRWAMLGAAGIFIPEFLTKLGILNT 61
>gi|212274977|ref|NP_001130616.1| uncharacterized protein LOC100191715 [Zea mays]
gi|195636368|gb|ACG37652.1| chlorophyll a-b binding protein [Zea mays]
gi|414590632|tpg|DAA41203.1| TPA: chlorophyll a-b binding protein [Zea mays]
Length = 260
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GP++NL
Sbjct: 182 TDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNL 241
Query: 76 ADHLADP 82
HLADP
Sbjct: 242 FAHLADP 248
>gi|226499760|ref|NP_001148893.1| chlorophyll a-b binding protein [Zea mays]
gi|195622990|gb|ACG33325.1| chlorophyll a-b binding protein [Zea mays]
gi|414887286|tpg|DAA63300.1| TPA: chlorophyll a-b binding protein isoform 1 [Zea mays]
gi|414887287|tpg|DAA63301.1| TPA: chlorophyll a-b binding protein isoform 2 [Zea mays]
gi|414887288|tpg|DAA63302.1| TPA: chlorophyll a-b binding protein isoform 3 [Zea mays]
Length = 270
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GP++NL
Sbjct: 192 TDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNL 251
Query: 76 ADHLADP 82
HLADP
Sbjct: 252 FAHLADP 258
>gi|303277087|ref|XP_003057837.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas pusilla CCMP1545]
gi|226460494|gb|EEH57788.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas pusilla CCMP1545]
Length = 237
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 1 MGAVEGYR--IAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 58
+G E YR I P G LYPGG FDPLG A+ + +LK++E+K+ RLAM +
Sbjct: 141 VGLAEAYRGGIVSPPKGFPEPSLYPGGRFDPLGFAEKGD-LEKLKLQELKHCRLAMGAFL 199
Query: 59 GFFVQAIVTGKGPLENLADHLADPVNN 85
G VQ TG GP+ NL H++DP +N
Sbjct: 200 GCLVQKEFTGVGPVANLTSHISDPTHN 226
>gi|145079885|tpg|DAA05947.1| TPA_inf: chloroplast light-harvesting complex protein precursor
Lhcp2.1 [Micromonas sp. CCMP490]
Length = 231
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 16/95 (16%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLY---------PGGSFDPLGLADDPEAFAELKVKEIKNGR 51
+G E YR +TDP + PGG FDPLGLA+ + ELK+KE+K+ R
Sbjct: 132 VGLAEAYRTG------LTDPAFDELTVGDVSPGGRFDPLGLAESGD-LEELKIKELKHCR 184
Query: 52 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 86
L+MF+ G Q + T +GP+ N H+ADPV+ N
Sbjct: 185 LSMFAWLGCISQGLATQEGPIANWQAHVADPVHAN 219
>gi|666054|emb|CAA59049.1| LHCI-680, photosystem I antenna protein [Hordeum vulgare subsp.
vulgare]
gi|326493584|dbj|BAJ85253.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 255
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GP++NL
Sbjct: 177 TDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNL 236
Query: 76 ADHLADP 82
HLADP
Sbjct: 237 FAHLADP 243
>gi|384245552|gb|EIE19045.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
Length = 172
Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 44/60 (73%), Gaps = 5/60 (8%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 86
FDP+GL +D + E++N RLAM + GF+ QA VTGKGPL+NL+DHLADP++NN
Sbjct: 73 FDPMGLRNDYR-----RQSEVRNARLAMLANLGFWSQAAVTGKGPLQNLSDHLADPLHNN 127
>gi|87313221|gb|ABD37907.1| light-harvesting chlorophyll-a/b binding protein Lhca5
[Chlamydomonas incerta]
Length = 257
Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 22 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD 81
YPGG F P D AELKVKEIKNGRLAM + GF + A VTGKGP+ L +HLAD
Sbjct: 156 YPGGVFAPFIPGD----LAELKVKEIKNGRLAMLAFVGFVMAAQVTGKGPIAALQEHLAD 211
Query: 82 PVNNNAWAYATNFVPG 97
P ++ A VPG
Sbjct: 212 PFGTTIFSKAA-VVPG 226
>gi|62199619|gb|AAX76906.1| chloroplast Tidi [Dunaliella salina]
Length = 350
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 19 DPLYPGG---SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
P YPGG +F LG D+ + F ELKVKEI+NGRLAM + GF VQA VT GP +NL
Sbjct: 274 QPAYPGGGFFNFAGLGAKDEKQMF-ELKVKEIRNGRLAMLAFLGFMVQAEVTHVGPFQNL 332
Query: 76 ADHLADPVNNNAWAYATN 93
DH+ P N + TN
Sbjct: 333 LDHINSPGAQNLLSRLTN 350
>gi|1098325|prf||2115393A chlorophyll a/b/c-binding protein
Length = 200
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
Query: 1 MGAVEGYR--IAGGPLGEVT-DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 57
+G E YR ++ P E+T + PGG FD LGLA+ + ELK+KE+K+ RL+MF+
Sbjct: 101 VGLAEAYRTGLSDSPFEELTVGDVSPGGRFDXLGLAESGD-LEELKIKELKHCRLSMFAW 159
Query: 58 FGFFVQAIVTGKGPLENLADHLADPVNNN 86
G QA+ T +GP+ N H+ADPV+ N
Sbjct: 160 LGCIFQALATQEGPIANWQAHVADPVHAN 188
>gi|357122261|ref|XP_003562834.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
[Brachypodium distachyon]
Length = 258
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + QA TG GP++NL
Sbjct: 180 TDVGYPGGLWFDPLGYGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNL 239
Query: 76 ADHLADP 82
HLADP
Sbjct: 240 FAHLADP 246
>gi|115765|sp|P10708.1|CB12_SOLLC RecName: Full=Chlorophyll a-b binding protein 7, chloroplastic;
AltName: Full=LHCI type II CAB-7; Flags: Precursor
gi|19180|emb|CAA32197.1| chlorophyll a/b-binding protein [Solanum lycopersicum]
gi|170431|gb|AAA34159.1| chlorophyll a/b-binding protein [Solanum lycopersicum]
gi|226546|prf||1601518A chlorophyll a/b binding protein II
Length = 270
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 18 TDPLYPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 75
TD YPGG FDPLG P EL+ KEIKNGRLAM ++ G + Q I TG GP++NL
Sbjct: 192 TDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNL 251
Query: 76 ADHLADP 82
HLADP
Sbjct: 252 FAHLADP 258
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 80
FDPLGLA DPE+ + E+ + R AM G F+ ++T G L + + A
Sbjct: 88 FDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPSWYTA 141
>gi|217073418|gb|ACJ85068.1| unknown [Medicago truncatula]
gi|388507876|gb|AFK42004.1| unknown [Medicago truncatula]
Length = 253
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 46/74 (62%), Gaps = 7/74 (9%)
Query: 13 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 72
P GEV YPGG F+PL A EA K KEI NGRLAM + GF +Q VTGKGP
Sbjct: 178 PKGEVG---YPGGIFNPLNFAPTLEA----KEKEIANGRLAMLAFLGFIIQHNVTGKGPF 230
Query: 73 ENLADHLADPVNNN 86
+NL HL+DP +N
Sbjct: 231 DNLLQHLSDPWHNT 244
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 28/56 (50%)
Query: 15 GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 70
G +T L FDPLGLA+DPE E+ NGR AM + G + + T G
Sbjct: 64 GYLTGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTNIG 119
>gi|255078326|ref|XP_002502743.1| prasinophyte specific chlorophyll a/b-binding protein [Micromonas
sp. RCC299]
gi|255079024|ref|XP_002503092.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas sp. RCC299]
gi|255080886|ref|XP_002504009.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precuror [Micromonas sp. RCC299]
gi|226518009|gb|ACO64001.1| prasinophyte specific chlorophyll a/b-binding protein [Micromonas
sp. RCC299]
gi|226518358|gb|ACO64350.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas sp. RCC299]
gi|226519276|gb|ACO65267.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precuror [Micromonas sp. RCC299]
Length = 231
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 16/95 (16%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLY---------PGGSFDPLGLADDPEAFAELKVKEIKNGR 51
+G E YR ++DP++ PGG FDPLGLA+ + ELK+KE+K+ R
Sbjct: 132 VGLAEAYRTG------LSDPVFDELTVGDVSPGGRFDPLGLAESGD-LEELKIKELKHCR 184
Query: 52 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 86
L+MF+ G Q + T +GP+ N H+ADPV+ N
Sbjct: 185 LSMFAWLGCIFQGLATQEGPIANWQAHVADPVHAN 219
>gi|449452592|ref|XP_004144043.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Cucumis sativus]
Length = 267
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 22 YPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
YPGG FDP+ PE L+ KEIKNGRLAM + G + QAI TG+GPLENLA H+
Sbjct: 191 YPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHV 250
Query: 80 ADPVNNN 86
ADP + N
Sbjct: 251 ADPGHCN 257
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA-------DHL 79
FDPLGL DPE E+ + R AM ++ G + G ++N + ++
Sbjct: 83 FDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYF 142
Query: 80 ADPVN 84
ADP
Sbjct: 143 ADPTT 147
>gi|449500520|ref|XP_004161120.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Cucumis sativus]
Length = 267
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 22 YPGG-SFDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 79
YPGG FDP+ PE L+ KEIKNGRLAM + G + QAI TG+GPLENLA H+
Sbjct: 191 YPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHV 250
Query: 80 ADPVNNN 86
ADP + N
Sbjct: 251 ADPGHCN 257
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA-------DHL 79
FDPLGL DPE E+ + R AM ++ G + G ++N + ++
Sbjct: 83 FDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYF 142
Query: 80 ADPVN 84
ADP
Sbjct: 143 ADPTT 147
>gi|157965825|gb|ABW06949.1| chloroplast light-harvesting complex I protein precursor [Euglena
gracilis]
Length = 342
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%), Gaps = 7/68 (10%)
Query: 19 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 78
D YPG FDPLGL ++ E K++EIKNGRLAM +M G VQ+ +TGK PL NL++H
Sbjct: 83 DRSYPG--FDPLGLTNE-----ETKLQEIKNGRLAMTAMLGLEVQSHITGKSPLTNLSEH 135
Query: 79 LADPVNNN 86
L+ P++ N
Sbjct: 136 LSHPLSAN 143
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 18 TDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 77
+DP FD L L D K EIKNGRLA+ +M G VQ VTG PL NL +
Sbjct: 265 SDPTSRYSGFDSLNLTTD-----YTKEAEIKNGRLALTAMLGLQVQRHVTGVSPLLNLVE 319
Query: 78 HLADPV 83
H+ P+
Sbjct: 320 HVKHPL 325
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 86
FDP GLA DP+ F ++V E+ +GRLAM ++ G V I GKG A VN
Sbjct: 187 FDPAGLAADPKVFERMRVSEVYHGRLAMLAIVGAVVPDI-QGKGAWYEAAQSAGIGVNEV 245
Query: 87 A 87
A
Sbjct: 246 A 246
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 30 LGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 78
LGLA DP+ + +++ E+ +GRLAM + G + KG + +D+
Sbjct: 1 LGLAKDPKVYQRMRISEVFHGRLAMLGIVGCVAPELFFSKGAWFDYSDY 49
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.141 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,850,529,870
Number of Sequences: 23463169
Number of extensions: 71315964
Number of successful extensions: 139791
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1503
Number of HSP's successfully gapped in prelim test: 255
Number of HSP's that attempted gapping in prelim test: 136526
Number of HSP's gapped (non-prelim): 3098
length of query: 98
length of database: 8,064,228,071
effective HSP length: 67
effective length of query: 31
effective length of database: 6,492,195,748
effective search space: 201258068188
effective search space used: 201258068188
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)