BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034317
(98 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P14275|CB2C_SOLLC Chlorophyll a-b binding protein 1C, chloroplastic (Fragments)
OS=Solanum lycopersicum GN=CAB1C PE=3 SV=1
Length = 265
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
>sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB2R PE=2 SV=2
Length = 261
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 97/98 (98%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 164 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 223
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 224 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 261
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 70
+D GL+ DPE FA+ + E+ + R AM G ++ G
Sbjct: 75 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNG 118
>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type I, chloroplastic
(Fragment) OS=Cucumis sativus PE=2 SV=1
Length = 255
Score = 198 bits (503), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 158 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 217
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 218 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 255
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 70
+D GL+ DPE FA+ + E+ + R AM G +++ G
Sbjct: 69 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNG 112
>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum
lycopersicum GN=CAB3C PE=3 SV=1
Length = 267
Score = 198 bits (503), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 267
>sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB1R PE=2 SV=2
Length = 265
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 70
+D GL+ DPE FA+ + E+ + R AM G ++ G
Sbjct: 79 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNG 122
>sp|P14276|CB2E_SOLLC Chlorophyll a-b binding protein 3A, chloroplastic (Fragments)
OS=Solanum lycopersicum GN=CAB3A PE=3 SV=1
Length = 267
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADH+ADPVNNNAWA+ATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 267
>sp|P14277|CB2F_SOLLC Chlorophyll a-b binding protein 3B, chloroplastic (Fragments)
OS=Solanum lycopersicum GN=CAB3B PE=3 SV=1
Length = 267
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADH+ADPVNNNAWA+ATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 267
>sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp.
GN=CAB91R PE=3 SV=1
Length = 267
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267
>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member 1B, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 274
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 177 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 236
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 237 FVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 274
>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana
tabacum GN=CAB40 PE=2 SV=1
Length = 267
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
>sp|P14274|CB2A_SOLLC Chlorophyll a-b binding protein 1A, chloroplastic (Fragments)
OS=Solanum lycopersicum GN=CAB1A PE=3 SV=1
Length = 265
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
>sp|P08222|CB22_CUCSA Chlorophyll a-b binding protein of LHCII type 1 (Fragment)
OS=Cucumis sativus PE=2 SV=1
Length = 206
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/98 (97%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 109 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 168
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 169 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 206
>sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp.
GN=CAB22R PE=3 SV=1
Length = 267
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267
>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana
tabacum GN=CAB7 PE=3 SV=1
Length = 267
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYR+AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPL+NL DHLADPVNNNAWAYATNFVPGK
Sbjct: 230 FVQAIVTGKGPLDNLVDHLADPVNNNAWAYATNFVPGK 267
>sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum
sativum GN=AB80 PE=1 SV=1
Length = 269
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 172 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 231
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 232 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 269
>sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum
GN=CAB8 PE=1 SV=1
Length = 268
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 171 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 230
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHL+DPVNNNAW+YATNFVPGK
Sbjct: 231 FVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK 268
Score = 28.9 bits (63), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 70
+D GL+ DPE F++ + E+ + R AM G +++ G
Sbjct: 82 WDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNG 125
>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp.
GN=CAB25 PE=3 SV=1
Length = 266
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana
tabacum GN=CAB21 PE=2 SV=1
Length = 265
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplastic (Fragment)
OS=Glycine max PE=2 SV=1
Length = 245
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPL LADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 148 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLALADDPEAFAELKVKEIKNGRLAMFSMFGF 207
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLA+PVNNNAWAYATNFVPGK
Sbjct: 208 FVQAIVTGKGPLENLADHLAEPVNNNAWAYATNFVPGK 245
Score = 29.3 bits (64), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
+D GL+ DPE FA+ + E+ + R AM G
Sbjct: 59 WDTAGLSADPETFAKNRELEVIHSRWAMLGALG 91
>sp|P10707|CB2D_SOLLC Chlorophyll a-b binding protein 1D (Fragment) OS=Solanum
lycopersicum GN=CAB1D PE=3 SV=1
Length = 116
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 19 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 78
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 79 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 116
>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana
tabacum GN=CAB16 PE=2 SV=1
Length = 266
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 266
>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum
lycopersicum GN=CAB1B PE=3 SV=1
Length = 265
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
>sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp.
GN=CAB13 PE=3 SV=1
Length = 266
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAEL+VKEIKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea
PE=1 SV=1
Length = 267
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAW +ATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWNFATNFVPGK 267
>sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max
GN=CAB3 PE=3 SV=1
Length = 263
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 95/98 (96%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 166 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 225
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLA PVNNNAWAYATNFVPGK
Sbjct: 226 FVQAIVTGKGPLENLADHLAGPVNNNAWAYATNFVPGK 263
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 70
+D GL+ DPE FA+ + E+ + R AM G +++ G
Sbjct: 77 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNG 120
>sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 member 1A, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 278
Score = 195 bits (496), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 92/98 (93%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYR+AGGPLGEVTDP+YPGG+FDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 181 MGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGF 240
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 FVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 278
Score = 29.3 bits (64), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
+D GL+ DPE FA+ + E+ + R AM G
Sbjct: 92 WDTAGLSADPETFAKNRELEVIHSRWAMLGALG 124
>sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABC PE=3 SV=1
Length = 267
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AG PLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
>sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare
GN=CAB2 PE=3 SV=1
Length = 264
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 94/98 (95%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADD EAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 167 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDAEAFAELKVKEIKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 227 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 264
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
+D GL+ DPE FA+ + E+ +GR AM G
Sbjct: 78 WDTAGLSADPETFAKNRELEVIHGRWAMLGALG 110
>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana
tabacum GN=CAB50 PE=2 SV=1
Length = 267
Score = 195 bits (495), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 93/98 (94%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVK IKNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKHIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267
>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays
GN=CAB1 PE=3 SV=1
Length = 262
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/97 (96%), Positives = 96/97 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 165 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 224
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGPLENLADH+ADPVNNNAWAYATNFVPG
Sbjct: 225 FVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPG 261
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 70
+D GL+ DPE FA+ + E+ + R AM G +++ G
Sbjct: 76 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNG 119
>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays
GN=CAB-M9 PE=2 SV=1
Length = 265
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 91/98 (92%), Positives = 97/98 (98%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYR+AGGPLGEV DPLYPGG+FDPLGLADDPEAFA++KVKE+KNGRLAMFSMFGF
Sbjct: 168 MGAIEGYRVAGGPLGEVVDPLYPGGTFDPLGLADDPEAFADVKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
Score = 28.9 bits (63), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 70
+D GL+ DPE FA+ + E+ + R AM G ++ G
Sbjct: 79 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNG 122
>sp|P09755|CB22_SOYBN Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max
GN=CAB2 PE=3 SV=1
Length = 256
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 92/98 (93%), Positives = 94/98 (95%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEA AELKVKE+KNGRLAMFSMFGF
Sbjct: 159 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEALAELKVKELKNGRLAMFSMFGF 218
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWAYAT PGK
Sbjct: 219 FVQAIVTGKGPLENLADHLADPVNNNAWAYATKLCPGK 256
>sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus
pyrifolia PE=2 SV=1
Length = 278
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 90/98 (91%), Positives = 98/98 (100%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGA+EGYR+AGGPLGEVTDP+YPGG+FDPLGLADDP+AFA++KVKEIKNGRLAMFSMFGF
Sbjct: 181 MGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFADVKVKEIKNGRLAMFSMFGF 240
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 FVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 278
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
+D GL+ DPE FA+ + E+ + R AM G
Sbjct: 92 WDTAGLSADPETFAKNRELEVIHSRWAMLGALG 124
>sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABE PE=3 SV=1
Length = 266
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 92/98 (93%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AG PLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQA+VTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 229 FVQALVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 266
>sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2
SV=1
Length = 265
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/98 (93%), Positives = 94/98 (95%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAF ELKVKE+K GRLAM SMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFGELKVKELKKGRLAMLSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADH+ADPVNNNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPGK 265
>sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens
GN=LHC0 PE=1 SV=1
Length = 264
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 90/98 (91%), Positives = 95/98 (96%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGE+ DPLYPGGSFDPLGLA+DPE AELKVKE+KNGRLAMFSMFGF
Sbjct: 167 MGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLAEDPERSAELKVKELKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 227 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 264
Score = 28.9 bits (63), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 70
+D GL+ DPE FA+ + E+ + R AM G ++ G
Sbjct: 78 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNG 121
>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic
OS=Polystichum munitum GN=CABF3 PE=3 SV=1
Length = 265
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 89/98 (90%), Positives = 94/98 (95%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL+DHLADP NNAWAYATNF PGK
Sbjct: 228 FVQAIVTGKGPIENLSDHLADPAVNNAWAYATNFTPGK 265
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 70
+D GL+ DPE FA+ + E+ + R AM G ++ G
Sbjct: 79 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNG 122
>sp|P04159|CB21_PEA Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum
GN=AB96 PE=1 SV=1
Length = 228
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 92/98 (93%), Positives = 95/98 (96%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+ PEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 131 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEVPEAFAELKVKELKNGRLAMFSMFGF 190
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FV AIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 191 FVPAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 228
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 70
+D GL+ DPE FA+ + E+ + R AM G +++ G
Sbjct: 42 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNG 85
>sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp.
GN=CAB22L PE=3 SV=1
Length = 267
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/98 (90%), Positives = 93/98 (94%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLG V DPLYPGGSFDPLGLA+DPEAFAELKVKE KNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRVAGGPLGVVVDPLYPGGSFDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGF 229
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
F+QAIVTGKGPLENLADHL DPVNNNAW+YATNFVP K
Sbjct: 230 FIQAIVTGKGPLENLADHLVDPVNNNAWSYATNFVPRK 267
>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum
GN=WHAB1.6 PE=3 SV=1
Length = 266
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 89/98 (90%), Positives = 94/98 (95%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYRIAGGPLGE+ DPLYPGGSFDPLGLA+ P+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGPLE+LADH+ADPVNNNAW ATNFVPGK
Sbjct: 229 FVQAIVTGKGPLEDLADHIADPVNNNAWLIATNFVPGK 266
>sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba
GN=CAB1 PE=3 SV=1
Length = 266
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/99 (92%), Positives = 94/99 (94%), Gaps = 1/99 (1%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MGAVEGYR+AG GPLGE D LYPGGSFDPLGLA DPEAFAELKVKEIKNGRLAMFSMFG
Sbjct: 168 MGAVEGYRVAGEGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFG 227
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 228 FFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Lemna gibba PE=3 SV=1
Length = 264
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 87/98 (88%), Positives = 93/98 (94%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE DPLYPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 167 MGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENLADH+ADPV NNAWA+ATNFVPGK
Sbjct: 227 FVQAIVTGKGPIENLADHIADPVANNAWAFATNFVPGK 264
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 12 GPLGEVTDPLYPGGSF------DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 65
GP E T P Y G F D GL+ DPE FA+ + E+ + R AM G +
Sbjct: 58 GPFSEQT-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPEL 116
Query: 66 VTGKG 70
++ G
Sbjct: 117 LSKNG 121
>sp|Q00827|CB48_MAIZE Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays
GN=CAB48 PE=3 SV=1
Length = 264
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/98 (90%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGY +AGG LGEV DPLY GGSFDPLGL DDPE FAELKVKEIKNGRLAMFSMFGF
Sbjct: 167 MGAVEGYHVAGGRLGEVVDPLYLGGSFDPLGLGDDPERFAELKVKEIKNGRLAMFSMFGF 226
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENLADHL DPVNNNAWAYATNFVPGK
Sbjct: 227 FVQAIVTGKGPIENLADHLTDPVNNNAWAYATNFVPGK 264
>sp|P04778|CB1C_ARATH Chlorophyll a-b binding protein 1, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.3 PE=1 SV=1
Length = 267
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 90/99 (90%), Positives = 94/99 (94%), Gaps = 1/99 (1%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MGAVEGYR+AG GPLGE D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFG
Sbjct: 169 MGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFG 228
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FFVQAIVTGKGP+ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 229 FFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 267
>sp|Q8VZ87|CB1B_ARATH Chlorophyll a-b binding protein 3, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.2 PE=1 SV=2
Length = 267
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 90/99 (90%), Positives = 94/99 (94%), Gaps = 1/99 (1%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MGAVEGYR+AG GPLGE D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFG
Sbjct: 169 MGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFG 228
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FFVQAIVTGKGP+ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 229 FFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 267
>sp|P0CJ48|CB1A_ARATH Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.1 PE=1 SV=1
Length = 267
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 90/99 (90%), Positives = 94/99 (94%), Gaps = 1/99 (1%)
Query: 1 MGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 59
MGAVEGYR+AG GPLGE D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFG
Sbjct: 169 MGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFG 228
Query: 60 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FFVQAIVTGKGP+ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 229 FFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 267
>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium
hirsutum GN=CAB-151 PE=2 SV=2
Length = 265
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/98 (88%), Positives = 92/98 (93%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE DP+YPGG+FDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPIENLFDHLADPVANNAWAYATNFVPGK 265
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 70
+D GL+ DPE FA+ + E+ + R AM G I++ G
Sbjct: 79 WDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNG 122
>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella
patens subsp. patens PE=3 SV=1
Length = 269
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 87/97 (89%), Positives = 90/97 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MGAVEGYR+AGGPLGEVTDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGF
Sbjct: 171 MGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 230
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 97
FVQAIVTGKGPLENL DHLADPV NNAWAYA PG
Sbjct: 231 FVQAIVTGKGPLENLNDHLADPVANNAWAYAPTSPPG 267
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 27 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 70
+D GL+ DPE FA + E+ + R AM G ++ G
Sbjct: 82 WDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSG 125
>sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloroplastic (Fragment)
OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1
Length = 237
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/98 (87%), Positives = 92/98 (93%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG VEGYR+ GGPLGE D +YPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 140 MGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 199
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL+DH+ADPV NNAWAYATNFVPGK
Sbjct: 200 FVQAIVTGKGPIENLSDHIADPVANNAWAYATNFVPGK 237
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 12 GPLGEVTDPLYPGGSF------DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 65
GP E T P Y G F D GL+ DPE FA + E+ + R AM G I
Sbjct: 31 GPFSEQT-PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEI 89
Query: 66 VTGKG 70
++ G
Sbjct: 90 LSKNG 94
>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana
tabacum GN=CAB36 PE=3 SV=1
Length = 265
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 85/98 (86%), Positives = 91/98 (92%)
Query: 1 MGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
MG +EGYR+ GGPLGE D +YPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF
Sbjct: 168 MGLIEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
FVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 228 FVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 265
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 12 GPLGEVTDPLYPGGSF------DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 65
GP E T P Y G F D GL+ DPE FA + E+ + R AM G I
Sbjct: 59 GPFSEQT-PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEI 117
Query: 66 VTGKG 70
++ G
Sbjct: 118 LSKNG 122
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.141 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,455,807
Number of Sequences: 539616
Number of extensions: 1693451
Number of successful extensions: 3493
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 3277
Number of HSP's gapped (non-prelim): 197
length of query: 98
length of database: 191,569,459
effective HSP length: 67
effective length of query: 31
effective length of database: 155,415,187
effective search space: 4817870797
effective search space used: 4817870797
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)