Query 034318
Match_columns 98
No_of_seqs 162 out of 845
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 20:58:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034318.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034318hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3f7l_A Copper,zinc superoxide 99.9 5.2E-27 1.8E-31 169.2 5.9 81 17-97 40-150 (152)
2 3l9y_A Cu-znsod1, superoxide d 99.9 1.1E-26 3.6E-31 167.7 6.1 81 17-97 41-152 (154)
3 3pu7_A Superoxide dismutase [C 99.9 9.6E-27 3.3E-31 168.2 5.9 81 17-97 42-152 (154)
4 4a7u_A Superoxide dismutase [C 99.9 8.6E-27 2.9E-31 168.0 5.2 81 17-97 42-152 (153)
5 3kbe_A Superoxide dismutase [C 99.9 2.4E-26 8.2E-31 166.6 6.2 82 17-98 41-155 (157)
6 1f1g_A Cuznsod, copper-zinc su 99.9 3E-26 1E-30 165.3 5.5 82 17-98 43-154 (154)
7 2wyt_A Superoxide dismutase [C 99.9 5.9E-26 2E-30 163.8 5.2 82 17-98 42-153 (153)
8 2e47_A EA4, TIME interVal meas 99.9 8.3E-26 2.8E-30 163.6 5.9 81 17-97 46-156 (156)
9 2q2l_A Superoxide dismutase; S 99.9 1.1E-25 3.8E-30 162.2 6.1 82 17-98 41-152 (152)
10 1xso_A Copper,zinc superoxide 99.9 1.8E-25 6E-30 160.7 6.1 81 17-97 40-149 (150)
11 1to4_A Superoxide dismutase; b 99.9 1.4E-25 4.6E-30 162.3 5.2 81 17-97 44-154 (156)
12 3ce1_A Superoxide dismutase [C 99.9 1.8E-25 6.2E-30 163.7 5.6 82 17-98 46-157 (168)
13 2jlp_A Extracellular superoxid 99.9 3.7E-24 1.3E-28 163.1 5.8 82 17-98 92-196 (222)
14 1do5_A Human copper chaperone 99.9 2.9E-24 9.9E-29 155.2 4.8 79 17-98 43-151 (154)
15 1xtm_B Hypothetical superoxide 99.9 1.6E-23 5.3E-28 154.2 7.5 81 17-97 61-171 (175)
16 2aqm_A Superoxide dismutase [C 99.9 1.2E-22 4.2E-27 146.7 6.1 79 17-95 44-154 (154)
17 2aqp_A Superoxide dismutase [C 99.9 1.9E-22 6.5E-27 146.9 5.4 79 17-95 53-164 (164)
18 1oal_A Superoxide dismutase; o 99.9 1.2E-22 4.1E-27 146.4 4.0 76 17-95 41-151 (151)
19 1eqw_A Cu,Zn superoxide dismut 99.9 2.3E-22 7.9E-27 145.4 5.4 79 17-95 44-155 (156)
20 1eso_A SOD, Cu, Zn superoxide 99.9 2.9E-22 1E-26 144.6 5.7 79 17-95 44-154 (154)
21 1pzs_A Superoxide dismutase [C 99.8 4E-22 1.4E-26 150.3 4.6 80 17-96 80-207 (208)
22 1z9n_A Superoxide dismutase [C 99.8 8.7E-22 3E-26 145.3 5.4 79 17-95 66-177 (177)
23 1ej8_A Lys7; beta barrel, copp 99.8 6.5E-22 2.2E-26 141.5 1.6 76 17-95 51-139 (140)
24 1jk9_B CCS, copper chaperone f 99.8 4.5E-22 1.6E-26 151.8 0.1 80 17-98 128-219 (249)
25 1qup_A Superoxide dismutase 1 99.8 5.5E-22 1.9E-26 148.6 0.5 80 17-98 127-218 (222)
26 1hf2_A MINC, septum site-deter 53.2 13 0.00044 26.9 3.5 34 56-94 132-165 (210)
No 1
>3f7l_A Copper,zinc superoxide dismutase; oxidoreductase (superoxide acceptor), greek KEY beta-barrel, amyloid filaments, ALS, FALS; 0.99A {Alvinella pompejana} SCOP: b.1.8.1 PDB: 3f7k_A
Probab=99.93 E-value=5.2e-27 Score=169.15 Aligned_cols=81 Identities=28% Similarity=0.432 Sum_probs=72.3
Q ss_pred cccccccCCCCccccccCCCCccCCCCC--------CCCCCCCCceEE---------eecCeEEeeCCCCccccEEEEec
Q 034318 17 IGEISSNKYEQYLSGTGLEIELYQPDLD--------MLHCVGIPALAS---------HEHSSVALSGPDSVIGRGLVLHS 79 (98)
Q Consensus 17 ~re~~~~~~gdfssg~~sdgg~ynP~~~--------~~H~gd~p~~~~---------~~d~~i~L~G~~siiGRalVIHa 79 (98)
.+.+|+|+++|.+.+|.|+|+||||... ..|.|||||+.. +.|..++|+|+++|+|||||||+
T Consensus 40 ~hgfHIHe~Gd~s~gc~SaGgHfnP~~~~Hg~p~~~~~H~GDLgni~~~~~G~a~~~~~d~~i~L~g~~~iiGRslVIHa 119 (152)
T 3f7l_A 40 KHGFHVHEFGDNTNGCTSAGGHFNPHGKEHGAPEDENRHAGDLGNVVAGEDGKAVINMKDKLVKLTGPDSVIGRTLVVHV 119 (152)
T ss_dssp EEEEEEESCCCCTTTTGGGCSBCCTTCCCCCCTTCSSSCTTEEEEEEECTTSCEEEEEEESSCBSSSTTBCTTCEEEEES
T ss_pred cccEEEeecCcCCCCcccccccccccCCcCCCCCCCCCccccccCeEECCCCeEEEEEECcceeccCCcccCCeEEEEEc
Confidence 4789999999999999999999999832 148999999753 56778889999999999999999
Q ss_pred CCC-------------CCCCCceeEEEEeec
Q 034318 80 NPS-------------PNPGPGVAWGVIGLD 97 (98)
Q Consensus 80 ~~D-------------GnaG~RiACGvI~~~ 97 (98)
++| ||||+|||||||+++
T Consensus 120 ~~Dd~g~g~~~~s~~tGnaG~RiACgvI~~~ 150 (152)
T 3f7l_A 120 DEDDLGRGGHEQSKITGNAGGRLACGVIGIT 150 (152)
T ss_dssp SCCCTTCSCSTTHHHHTTCCSEEEEEECEEC
T ss_pred CCccCCCCCCcCcccCCCCCceEEEEEEEEe
Confidence 999 899999999999986
No 2
>3l9y_A Cu-znsod1, superoxide dismutase [CU-ZN]; greek-KEY-barrel, antioxidant, copper, cytoplasm, metal- binding, oxidoreductase; 1.80A {Bombyx mori} SCOP: b.1.8.1 PDB: 3l9e_A
Probab=99.93 E-value=1.1e-26 Score=167.69 Aligned_cols=81 Identities=28% Similarity=0.527 Sum_probs=71.7
Q ss_pred cccccccCCCCccccccCCCCccCCCCC--------CCCCCCCCceEE----------eecCeEEeeCCCCccccEEEEe
Q 034318 17 IGEISSNKYEQYLSGTGLEIELYQPDLD--------MLHCVGIPALAS----------HEHSSVALSGPDSVIGRGLVLH 78 (98)
Q Consensus 17 ~re~~~~~~gdfssg~~sdgg~ynP~~~--------~~H~gd~p~~~~----------~~d~~i~L~G~~siiGRalVIH 78 (98)
.+.+|+|+++|.+.+|.|+|+||||... ..|.||||+++. +.|..++|+|+++|+|||||||
T Consensus 41 ~hg~HIHe~Gd~s~gc~SaGgHfnP~~~~Hg~p~~~~~h~GDLgni~~~~~~G~a~~~~~d~~~sL~g~~~iiGRsiVIH 120 (154)
T 3l9y_A 41 KHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLVVH 120 (154)
T ss_dssp EEEEEEESCCCCTTGGGGGCSBCCTTCCCCCCTTCSSCCTTEEEEEEESSTTSEEEEEEEESSCBSSSTTBCTTSEEEEE
T ss_pred CccEEEEecCcCCCCcccccccccccCCcCCCCCcccccccccCCEEEeCCCCeEEEEEEcCceEecCccccCCeEEEEE
Confidence 4789999999999999999999999832 137899999875 3467778889999999999999
Q ss_pred cCCC-------------CCCCCceeEEEEeec
Q 034318 79 SNPS-------------PNPGPGVAWGVIGLD 97 (98)
Q Consensus 79 a~~D-------------GnaG~RiACGvI~~~ 97 (98)
+++| ||||+|||||||+++
T Consensus 121 a~~Dd~g~g~~~~s~~tGnaG~RiaCgvI~~~ 152 (154)
T 3l9y_A 121 ADPDDLGLGGNELSKTTGNAGGRIACGVIGLA 152 (154)
T ss_dssp SSCCCTTCSSSTTTTTTTTCCCEEEEEECEEC
T ss_pred cCCccCCCCCCcCcccCCCCCCcEEEEEEEEe
Confidence 9999 899999999999986
No 3
>3pu7_A Superoxide dismutase [CU-ZN], chloroplastic; oxidoreductase, antioxidant, metal-binding, DIS bond, transit peptide; 1.80A {Solanum lycopersicum} PDB: 3km1_A 3km2_A 3mkg_A 3hog_A 3s0p_A 1srd_A
Probab=99.93 E-value=9.6e-27 Score=168.23 Aligned_cols=81 Identities=26% Similarity=0.450 Sum_probs=72.0
Q ss_pred cccccccCCCCccccccCCCCccCCCCC--------CCCCCCCCceE---------EeecCeEEeeCCCCccccEEEEec
Q 034318 17 IGEISSNKYEQYLSGTGLEIELYQPDLD--------MLHCVGIPALA---------SHEHSSVALSGPDSVIGRGLVLHS 79 (98)
Q Consensus 17 ~re~~~~~~gdfssg~~sdgg~ynP~~~--------~~H~gd~p~~~---------~~~d~~i~L~G~~siiGRalVIHa 79 (98)
.+.+|+|+++|.+.+|.|+|+||||... ..|.||||++. .+.|..++|+|+++|+|||||||+
T Consensus 42 ~hgfHIHe~Gd~s~gc~SaGgHfnP~~~~Hg~p~~~~~h~GDLgni~~~~~G~a~~~~~d~~l~L~g~~~iiGRslVIH~ 121 (154)
T 3pu7_A 42 LHGFHLHEYGDTTNGCMSTGAHFNPNKLTHGAPGDEIRHAGDLGNIVANADGVAEVTLVDNQIPLTGPNSVVGRALVVHE 121 (154)
T ss_dssp EEEEEEESCCCCTTGGGGGCSBCCTTCCCCCCTTCSSCCTTEEEEEEECTTSCEEEEEEESSCCSSSTTCCTTSEEEEES
T ss_pred cccEEEeecCCCCCCccccccccCCccCcCCCCCccCCcCCcccCEEeCCCCcEEEEEEeCCeeeCCCCccCCeEEEEEC
Confidence 4789999999999999999999999832 13789999875 356778888999999999999999
Q ss_pred CCC-------------CCCCCceeEEEEeec
Q 034318 80 NPS-------------PNPGPGVAWGVIGLD 97 (98)
Q Consensus 80 ~~D-------------GnaG~RiACGvI~~~ 97 (98)
++| ||||+|||||||+++
T Consensus 122 ~~DD~~~g~~~~s~~tGnaG~RiaCGvIg~~ 152 (154)
T 3pu7_A 122 LEDDLGKGGHELSLTTGNAGGRLACGVVGLT 152 (154)
T ss_dssp SCCCTTCSCCTTTTTTTTCCCEEEEEECEEC
T ss_pred CCccCCCCCCcCCcCCCCCcCcEEEEEEEEe
Confidence 999 899999999999986
No 4
>4a7u_A Superoxide dismutase [CU-ZN]; oxidoreductase, amyotrophic lateral sclerosis, antioxidant, mutation, metal-binding, Zn superoxide dismutase; HET: ALE; 0.98A {Homo sapiens} PDB: 3ecv_A 1uxl_A* 4a7g_F* 4a7q_A* 4a7t_A* 4a7s_A* 4a7v_A* 4b3e_A 4a7g_A* 1hl4_A 1spd_A 2c9v_A* 1hl5_A 1pu0_A 2c9u_A 2c9s_A* 2v0a_A* 3ecu_A 3kh3_A 3kh4_A ...
Probab=99.93 E-value=8.6e-27 Score=168.02 Aligned_cols=81 Identities=26% Similarity=0.404 Sum_probs=72.1
Q ss_pred cccccccCCCCccccccCCCCccCCCCC--------CCCCCCCCceE---------EeecCeEEeeCCCCccccEEEEec
Q 034318 17 IGEISSNKYEQYLSGTGLEIELYQPDLD--------MLHCVGIPALA---------SHEHSSVALSGPDSVIGRGLVLHS 79 (98)
Q Consensus 17 ~re~~~~~~gdfssg~~sdgg~ynP~~~--------~~H~gd~p~~~---------~~~d~~i~L~G~~siiGRalVIHa 79 (98)
.+.+|+|+++|.+.+|.|+|+||||... ..|.||||++. .+.|..++|+|+++|+|||||||+
T Consensus 42 ~hg~HIHe~Gd~s~gc~SaGgHfnP~~~~Hg~p~~~~~h~GDLgni~~~~~G~a~~~~~d~~isL~g~~~iiGRsiVIHa 121 (153)
T 4a7u_A 42 LHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCITGRTLVVHE 121 (153)
T ss_dssp EEEEEEESCCCCTTSGGGGCSBCCTTCCCCCCTTCSSCCTTEEEEEEECTTSCEEEEEEESSCBSSGGGBCTTSEEEEES
T ss_pred cccEEEeecCccccccccccCeecccCCcCCCCCcCCCccCcccCeEeCCCceEEEEEEcCceEecCCcccCCeEEEEEc
Confidence 4789999999999999999999999832 13889999975 356778889999999999999999
Q ss_pred CCC-------------CCCCCceeEEEEeec
Q 034318 80 NPS-------------PNPGPGVAWGVIGLD 97 (98)
Q Consensus 80 ~~D-------------GnaG~RiACGvI~~~ 97 (98)
++| ||||+|||||||+++
T Consensus 122 ~~Dd~g~g~~~~s~~tGnaG~RiaCgvI~~~ 152 (153)
T 4a7u_A 122 KADDLGKGGNEESTKTGNAGSRLACGVIGIA 152 (153)
T ss_dssp SCCCTTCSSSGGGGTTTTCCSEEEEEECEEC
T ss_pred CCccCCCCCCcCcccCCCCcCeEEEEEEEEe
Confidence 999 899999999999986
No 5
>3kbe_A Superoxide dismutase [CU-ZN]; Cu-Zn superoxide dismutase, antioxidant, oxidoreductase, NEM disulfide bond, metal-binding; 1.10A {Caenorhabditis elegans} SCOP: b.1.8.1 PDB: 3kbf_A
Probab=99.93 E-value=2.4e-26 Score=166.60 Aligned_cols=82 Identities=26% Similarity=0.389 Sum_probs=70.6
Q ss_pred cccccccCCCCccccccCCCCccCCCCCC--------CCCCCCCceE---------EeecCeEEeeCCCCccccEEEEec
Q 034318 17 IGEISSNKYEQYLSGTGLEIELYQPDLDM--------LHCVGIPALA---------SHEHSSVALSGPDSVIGRGLVLHS 79 (98)
Q Consensus 17 ~re~~~~~~gdfssg~~sdgg~ynP~~~~--------~H~gd~p~~~---------~~~d~~i~L~G~~siiGRalVIHa 79 (98)
.+.+|+|+++|.+.+|.++|+||||.... .|.||||++. .+.|..++|+|+++|+|||||||+
T Consensus 41 ~hgfHIHe~Gd~s~gc~SaGgHfnP~~~~Hg~p~~~~~h~GDLgni~~~~~G~a~~~~~d~~i~L~g~~siiGRsiVIHa 120 (157)
T 3kbe_A 41 LHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHA 120 (157)
T ss_dssp CEEEEEESCCCCTTTTGGGCSBCCTTCCCSSSGGGGSCCTTEEEEECCCTTSEEEEEECSCCCCSSSTTCCTTSEEEEEC
T ss_pred cccEEEeecCccCcccccccccccccCCcCCCCCcCCCccCcccCEEeCCCCeEEEEEEecceeeCCCcccCCeEEEEeC
Confidence 57899999999999999999999998321 3889999874 466788899999999999999999
Q ss_pred CCC----------------CCCCCceeEEEEeecC
Q 034318 80 NPS----------------PNPGPGVAWGVIGLDA 98 (98)
Q Consensus 80 ~~D----------------GnaG~RiACGvI~~~a 98 (98)
++| ||||+|||||||+++.
T Consensus 121 ~~Dd~~~g~~~~~~~s~~tGnaG~RiaCGvI~~~~ 155 (157)
T 3kbe_A 121 GQDDLGEGVGDKAEESKKTGNAGARAACGVIALAA 155 (157)
T ss_dssp C-----------------CCTTTTEEEEEEEEECC
T ss_pred CCCcCCCCCCCCCcCccCCCCCcCcEEEEEEEeec
Confidence 998 6999999999999863
No 6
>1f1g_A Cuznsod, copper-zinc superoxide dismutase; nitric oxide, oxidoreductase; 1.35A {Saccharomyces cerevisiae} SCOP: b.1.8.1 PDB: 1f1a_A 1f18_A 1jcv_A 1b4l_A 1sdy_A 1yaz_A 1yso_A 2jcw_A 1f1d_A 1jk9_A 1b4t_A
Probab=99.92 E-value=3e-26 Score=165.32 Aligned_cols=82 Identities=28% Similarity=0.413 Sum_probs=72.8
Q ss_pred cccccccCCCCccccccCCCCccCCCCCC--------CCCCCCCceE---------EeecCeEEeeCCCCccccEEEEec
Q 034318 17 IGEISSNKYEQYLSGTGLEIELYQPDLDM--------LHCVGIPALA---------SHEHSSVALSGPDSVIGRGLVLHS 79 (98)
Q Consensus 17 ~re~~~~~~gdfssg~~sdgg~ynP~~~~--------~H~gd~p~~~---------~~~d~~i~L~G~~siiGRalVIHa 79 (98)
.+.+|+|+++|.+.+|.++|+||||.... .|.||||++. .+.|..++|+|+++|+|||||||+
T Consensus 43 ~hg~HIHe~Gd~s~gc~SaG~HfnP~~~~hg~p~~~~~h~GDLgni~~~~~G~a~~~~~d~~~~l~g~~siiGRsvVIH~ 122 (154)
T 1f1g_A 43 ERGFHIHEFGDATNGCVSAGPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHA 122 (154)
T ss_dssp EEEEEEESCCCCTTTTGGGCSBCCTTCCCCCCTTSSSSCTTEEEEEECCTTSCEEEEEEESSCCSSSTTCCTTSEEEECS
T ss_pred eEeEEEecCCCCCCChhhccCccCCCCCCCCCCCcCCcccCcccCeEECCCceEEEEEEccceEcCCCCCcCCCEEEEee
Confidence 58899999999999999999999998321 3789999875 367788889999999999999999
Q ss_pred CCC-------------CCCCCceeEEEEeecC
Q 034318 80 NPS-------------PNPGPGVAWGVIGLDA 98 (98)
Q Consensus 80 ~~D-------------GnaG~RiACGvI~~~a 98 (98)
++| ||+|+|||||||++++
T Consensus 123 ~~Dd~g~g~~~~s~~tGnaG~RiACGvI~~~~ 154 (154)
T 1f1g_A 123 GQDDLGKGDTEESLKTGNAGPRPACGVIGLTN 154 (154)
T ss_dssp SCCCTTCSSSTTHHHHTTCCCCCEEEECEEEC
T ss_pred cCccccccccccccccCCCCCcEEEEEEEEcC
Confidence 988 8999999999999875
No 7
>2wyt_A Superoxide dismutase [CU-ZN]; oxidoreductase, disease mutation, amyotrophic lateral sclero antioxidant; HET: SO4; 1.00A {Homo sapiens} PDB: 2wyz_A* 2wz0_A* 2wz5_A* 1hl4_A 1spd_A 2c9v_A* 1hl5_A 1pu0_A 2c9u_A 2c9s_A* 2v0a_A* 3ecu_A 3kh3_A 3kh4_A 3re0_A 2wko_A 3gzo_A 2wz6_A* 3gzp_A 1uxl_A ...
Probab=99.92 E-value=5.9e-26 Score=163.80 Aligned_cols=82 Identities=26% Similarity=0.415 Sum_probs=72.1
Q ss_pred cccccccCCCCccccccCCCCccCCCCCC--------CCCCCCCceEE---------eecCeEEeeCCCCccccEEEEec
Q 034318 17 IGEISSNKYEQYLSGTGLEIELYQPDLDM--------LHCVGIPALAS---------HEHSSVALSGPDSVIGRGLVLHS 79 (98)
Q Consensus 17 ~re~~~~~~gdfssg~~sdgg~ynP~~~~--------~H~gd~p~~~~---------~~d~~i~L~G~~siiGRalVIHa 79 (98)
.+.+|+|++||.+.+|.++|+||||.... .|.||||++.. +.|..++|+|+++|+|||||||+
T Consensus 42 ~hg~HIHe~gd~~~~c~SaG~HfnP~~~~hg~p~~~~~h~GDLgni~~~~~G~a~~~~~d~~~~l~g~~siiGRslVIH~ 121 (153)
T 2wyt_A 42 LHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHE 121 (153)
T ss_dssp EEEEEEESCCCCTTGGGGGCSBCCTTCCCCCCTTCSSCCTTEEEEEEECTTSCEEEEEEESSSBSSGGGBCTTSEEEEES
T ss_pred ceeEEEecCCcCCCCcccccCccCCCCCCCCCCccCCCccCcccCeEECCCceEEEEEEcceEeccCCCCcCCCEEEEee
Confidence 47899999999999999999999998321 27899998764 66778888999999999999999
Q ss_pred CCC-------------CCCCCceeEEEEeecC
Q 034318 80 NPS-------------PNPGPGVAWGVIGLDA 98 (98)
Q Consensus 80 ~~D-------------GnaG~RiACGvI~~~a 98 (98)
++| ||+|+|||||||+++.
T Consensus 122 ~~Dd~~~~~~~~s~~tGnaG~RiACGvI~~~~ 153 (153)
T 2wyt_A 122 KADDLGKGGNEESTKTGNAGSRLACGVIGIAQ 153 (153)
T ss_dssp SCCCTTCSSSGGGGTTTTCCSEEEEEECEECC
T ss_pred cCccccccccccccccCCCCCcEEEEEEEEcC
Confidence 987 7999999999999863
No 8
>2e47_A EA4, TIME interVal measuring enzyme TIME; motalloprotein, glycoprotein, metal binding protein; HET: NAG MAN; 2.11A {Bombyx mori} PDB: 2e46_A
Probab=99.92 E-value=8.3e-26 Score=163.62 Aligned_cols=81 Identities=26% Similarity=0.355 Sum_probs=71.6
Q ss_pred cccccccCCCCccccccCCCCccCCCCCC--------CCCCCCCceEE---------eecCeEEeeCCCCccccEEEEec
Q 034318 17 IGEISSNKYEQYLSGTGLEIELYQPDLDM--------LHCVGIPALAS---------HEHSSVALSGPDSVIGRGLVLHS 79 (98)
Q Consensus 17 ~re~~~~~~gdfssg~~sdgg~ynP~~~~--------~H~gd~p~~~~---------~~d~~i~L~G~~siiGRalVIHa 79 (98)
.+.+|+|++||.+.+|.|+|+||||.... .|.||||++.. +.|..++|+|+++|+|||||||+
T Consensus 46 ~hg~HIHe~Gd~s~~c~SaGgHfnP~~~~Hg~p~~~~~h~GDLgni~~~~~G~a~~~~~d~~~~l~g~~siiGRslVIH~ 125 (156)
T 2e47_A 46 EYGFHVHEKGDLSGGCLSTGSHFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHE 125 (156)
T ss_dssp EEEEEEESCCCCTTGGGGGCSBCCTTCCCCCCTTSSSSCTTEEEEEEECTTSEEEEEEEESSCBSSSTTBCTTSEEEEES
T ss_pred cEEEEEeCCCcCCCChhhccCccCCCCCCCCCCCcCCCccccccCeEECCCceEEEEEEccceeccCCCCcCCCEEEEee
Confidence 47899999999999999999999998321 37899998754 66788889999999999999999
Q ss_pred CCC-------------CCCCCceeEEEEeec
Q 034318 80 NPS-------------PNPGPGVAWGVIGLD 97 (98)
Q Consensus 80 ~~D-------------GnaG~RiACGvI~~~ 97 (98)
++| ||+|+|||||||+++
T Consensus 126 ~~Dd~~~~~~~~s~~tGnaG~RiACGvI~~~ 156 (156)
T 2e47_A 126 KADDYGKSDHPDSRKTGNAGGRVACGVIGIL 156 (156)
T ss_dssp SCCCTTCSSSTTHHHHTTCCSEEEEEECEEC
T ss_pred cCcccccccccccccCCCCCCcEEEEEEEeC
Confidence 998 899999999999974
No 9
>2q2l_A Superoxide dismutase; SOD, SAD, antioxidant, oxidoreductase, metal-binding; 2.37A {Potentilla atrosanguinea}
Probab=99.92 E-value=1.1e-25 Score=162.24 Aligned_cols=82 Identities=24% Similarity=0.439 Sum_probs=72.2
Q ss_pred cccccccCCCCccccccCCCCccCCCCC--------CCCCCCCCceEE---------eecCeEEeeCCCCccccEEEEec
Q 034318 17 IGEISSNKYEQYLSGTGLEIELYQPDLD--------MLHCVGIPALAS---------HEHSSVALSGPDSVIGRGLVLHS 79 (98)
Q Consensus 17 ~re~~~~~~gdfssg~~sdgg~ynP~~~--------~~H~gd~p~~~~---------~~d~~i~L~G~~siiGRalVIHa 79 (98)
.+.+|+|+++|.+.+|.++|+||||... ..|.||||++.. +.|..++|+|+++|+|||||||+
T Consensus 41 ~hg~HIHe~Gd~~~gc~SaG~HfnP~~~~hg~p~~~~~h~GDLgni~~~~~G~a~~~~~d~~i~l~g~~siiGRslVIH~ 120 (152)
T 2q2l_A 41 LHGFHVHALGDTTNGCMSTGPHFNPAGKEHGSPEDETRHAGDLGNITVGDDGTACFTIVDKQIPLTGPHSIIGRAVVVHA 120 (152)
T ss_dssp EEEEEEESCCCCTTGGGGGCSBCCTTCCCCCCTTSSSCCTTEEEEEEECTTSCEEEEEEESSCCSSSTTCCTTSEEEEES
T ss_pred ceeEEEeecCccCCCcccccCccCCCCCCCCCCCcCCCcCCcccCeEECCCCcEEEEEEccceecCCCCccCCCEEEEee
Confidence 5789999999999999999999999832 137899999764 66778889999999999999999
Q ss_pred CCC-------------CCCCCceeEEEEeecC
Q 034318 80 NPS-------------PNPGPGVAWGVIGLDA 98 (98)
Q Consensus 80 ~~D-------------GnaG~RiACGvI~~~a 98 (98)
++| ||||+|||||||+++.
T Consensus 121 ~~Dd~g~g~~~~s~~tGnaG~RiACGvI~~~~ 152 (152)
T 2q2l_A 121 DPDDLGKGGHELSKSTGNAGGRIACGIIGLQG 152 (152)
T ss_dssp SCCCTTCSCSTTTTTTTTCCCEEEEEECEECC
T ss_pred cCccccccccccccccCCCCCcEEEEEEEEcC
Confidence 987 8999999999999863
No 10
>1xso_A Copper,zinc superoxide dismutase; oxidoreductase (superoxide acceptor); 1.49A {Xenopus laevis} SCOP: b.1.8.1
Probab=99.92 E-value=1.8e-25 Score=160.71 Aligned_cols=81 Identities=25% Similarity=0.402 Sum_probs=71.0
Q ss_pred cccccccCCCCccccccCCCCccCCCCC--------CCCCCCCCceEE--------eecCeEEeeCCCCccccEEEEecC
Q 034318 17 IGEISSNKYEQYLSGTGLEIELYQPDLD--------MLHCVGIPALAS--------HEHSSVALSGPDSVIGRGLVLHSN 80 (98)
Q Consensus 17 ~re~~~~~~gdfssg~~sdgg~ynP~~~--------~~H~gd~p~~~~--------~~d~~i~L~G~~siiGRalVIHa~ 80 (98)
.+.+|+|+++|.+.+|.++|+||||... ..|.||||++.. +.|..++|+|+++|+|||||||++
T Consensus 40 ~hg~HIHe~Gd~s~gc~saG~HfnP~~~~hg~p~~~~~h~GDLgni~~~~G~a~~~~~d~~~~l~g~~siiGRsiVIH~~ 119 (150)
T 1xso_A 40 LHGFHIHVFGDNTNGCMSAGSHFNPENKNHGAPGDTDRHVGDLGNVTAEGGVAQFKITDSLISLKGPNSIIGRTAVVHEK 119 (150)
T ss_dssp EEEEEEESCCCCTTGGGGGCSBCCTTCCCCCCTTCSSSCTTEEEEEEEBTTEEEEEEEESSCBSSSTTBCTTSEEEEESS
T ss_pred ceeEEEecCCCCCCCcccccCccCCCCCCCCCCcccccccccccCEEecCCeEEEEeeccceeeCCCCccCCCEEEEeec
Confidence 5789999999999999999999999832 137899999764 455667788999999999999999
Q ss_pred CC-------------CCCCCceeEEEEeec
Q 034318 81 PS-------------PNPGPGVAWGVIGLD 97 (98)
Q Consensus 81 ~D-------------GnaG~RiACGvI~~~ 97 (98)
+| ||||+|||||||+++
T Consensus 120 ~Dd~g~g~~~~s~~tGnaG~RiACGvI~~~ 149 (150)
T 1xso_A 120 ADDLGKGGNDESLKTGNAGGRLACGVIGYS 149 (150)
T ss_dssp CCCTTCSSSTTHHHHTTCCCEEEEEECEEC
T ss_pred CccccccccccccccCCCCCcEEEEEEEec
Confidence 98 899999999999986
No 11
>1to4_A Superoxide dismutase; beta-barrel, oxidoreductase; 1.55A {Schistosoma mansoni} SCOP: b.1.8.1 PDB: 1to5_A 3mnd_A
Probab=99.91 E-value=1.4e-25 Score=162.34 Aligned_cols=81 Identities=23% Similarity=0.409 Sum_probs=71.8
Q ss_pred cccccccCCCCccccccCCCCccCCCCCC--------CCCCCCCceEE---------eecCeEEeeCCCCccccEEEEec
Q 034318 17 IGEISSNKYEQYLSGTGLEIELYQPDLDM--------LHCVGIPALAS---------HEHSSVALSGPDSVIGRGLVLHS 79 (98)
Q Consensus 17 ~re~~~~~~gdfssg~~sdgg~ynP~~~~--------~H~gd~p~~~~---------~~d~~i~L~G~~siiGRalVIHa 79 (98)
.+.+|+|+++|.+.+|.++|+||||.... .|.||||++.. +.|..++|+|+++|+|||||||+
T Consensus 44 ~hg~HIHe~Gd~s~gc~SaG~HfnP~~~~hg~p~~~~~h~GDLgni~~~~~G~a~~~~~d~~~~l~g~~siiGRslVIH~ 123 (156)
T 1to4_A 44 KHGFHVHEFGDTTNGCTSAGAHFNPTKQEHGAPEDSIRHVGDLGNVVAGADGNAVYNATDKLISLNGSHSIIGRSMVIHE 123 (156)
T ss_dssp EEEEEEESCCCCTTTTGGGCSBCCTTCCCCCCTTCSSCCTTEEEEEEECTTSCEEEEEEESSCBSSGGGBCTTSEEEEES
T ss_pred cEeEEEecCCCCCCChhhccCcCCCCCCCcCCcccCCCccccccCeEECCCceEEEEEEecceecCCCCccCCCEEEEee
Confidence 57899999999999999999999998321 37899998764 66788889999999999999999
Q ss_pred CCC-------------CCCCCceeEEEEeec
Q 034318 80 NPS-------------PNPGPGVAWGVIGLD 97 (98)
Q Consensus 80 ~~D-------------GnaG~RiACGvI~~~ 97 (98)
++| ||+|+|||||||+++
T Consensus 124 ~~DD~g~g~~~~s~~tGnaG~RiACGvI~~~ 154 (156)
T 1to4_A 124 NEDDLGRGGHELSKVTGNAGGRLACGVVGLA 154 (156)
T ss_dssp SCCCTTCSCSTTHHHHTTCCSEEEEEECEEC
T ss_pred cCccccccccccccccCCCCCcEEEEEEEee
Confidence 997 899999999999986
No 12
>3ce1_A Superoxide dismutase [CU-ZN]; greek-KEY beta barrel, antioxidant, copper, metal-binding, oxidoreductase, zinc; 1.20A {Cryptococcus liquefaciens}
Probab=99.91 E-value=1.8e-25 Score=163.75 Aligned_cols=82 Identities=26% Similarity=0.419 Sum_probs=72.4
Q ss_pred cccccccCCCCccccccCCCCccCCCCC--------CCCCCCCCceE---------EeecCeEEeeCCCCccccEEEEec
Q 034318 17 IGEISSNKYEQYLSGTGLEIELYQPDLD--------MLHCVGIPALA---------SHEHSSVALSGPDSVIGRGLVLHS 79 (98)
Q Consensus 17 ~re~~~~~~gdfssg~~sdgg~ynP~~~--------~~H~gd~p~~~---------~~~d~~i~L~G~~siiGRalVIHa 79 (98)
.+.+|+|++||.+.+|.++|+||||... ..|.||||++. .+.|..++|.|+++|+|||||||+
T Consensus 46 ~hg~HIHe~Gd~s~gc~SaGgHfnP~~~~Hg~p~~~~~h~GDLgni~~~~~G~a~~~~~d~~i~L~g~~siiGRSiVIHa 125 (168)
T 3ce1_A 46 QRGFHVHQFGDNSNGCTSAGPHFNPTGTNHGDRTAEVRHVGDLGNVKTDASGVAKVQISDSQLSLVGPHSIIGRTIVIHA 125 (168)
T ss_dssp EEEEEEESCCCCTTGGGGGCSBCCTTCCCCCCTTSSSCCTTEEEEEEBCTTSCEEEEEEESSCBSSSTTBCTTSEEEEES
T ss_pred eeeEEEecCCcCCCChhhccCccCCCCCCCCCCCcCCCcCCcccCeEECCCCcEEEEecccceEeCCCCCcCCCEEEEee
Confidence 4789999999999999999999999832 23789999875 367788899999999999999999
Q ss_pred CCC-------------CCCCCceeEEEEeecC
Q 034318 80 NPS-------------PNPGPGVAWGVIGLDA 98 (98)
Q Consensus 80 ~~D-------------GnaG~RiACGvI~~~a 98 (98)
++| ||||+|||||||++++
T Consensus 126 ~~DD~g~g~~~~s~~tGnaG~RiACGvI~~~~ 157 (168)
T 3ce1_A 126 GEDDLGKTDHPESLKTGNAGARSACGVIGIAA 157 (168)
T ss_dssp SCCCTTCSSSTTHHHHCSCCSEEEEEECEEEC
T ss_pred cCccccccccccccccCCCCCcEEEEEEEecc
Confidence 998 7999999999999864
No 13
>2jlp_A Extracellular superoxide dismutase (Cu-Zn); glycolisation, oxidoreductase, heparin binding, heparin-BIND oxidative stress, antioxidant; 1.70A {Homo sapiens}
Probab=99.89 E-value=3.7e-24 Score=163.07 Aligned_cols=82 Identities=23% Similarity=0.338 Sum_probs=70.7
Q ss_pred cccccccCCCCccccccCCCCccCCCCC--CCCCCCCCceEE--------eecCeEEeeCCCCccccEEEEecCCC----
Q 034318 17 IGEISSNKYEQYLSGTGLEIELYQPDLD--MLHCVGIPALAS--------HEHSSVALSGPDSVIGRGLVLHSNPS---- 82 (98)
Q Consensus 17 ~re~~~~~~gdfssg~~sdgg~ynP~~~--~~H~gd~p~~~~--------~~d~~i~L~G~~siiGRalVIHa~~D---- 82 (98)
.+.+|+|++||.+.+|.++|+||||... ..|+||||++.. +.|..++|+|+++|+|||||||+++|
T Consensus 92 ~HGfHIHe~Gd~s~gc~SAGgHfNP~~~~H~~H~GDLgni~~~~G~a~~~~~d~~i~L~g~~sIiGRSiVIHa~~DD~g~ 171 (222)
T 2jlp_A 92 SRAIHVHQFGDLSQGCESTGPHYNPLAVPHPQHPGDFGNFAVRDGSLWRYRAGLAASLAGPHSIVGRAVVVHAGEDDLGR 171 (222)
T ss_dssp EEEEEEESCCCCTTGGGGGCSBCCTTCCCTTCSTTEEEEEEEETTBEEEEEEEESCBSSSTTBCTTSEEEEESSCCCTTC
T ss_pred ceeEEEECCCCCCCCcccccCCCCCCCCCCcccccccccEEecCCcEEEEEEccccccCCCCccCCCEEEEeecCccccc
Confidence 5899999999999999999999999832 247899999765 33445667899999999999999997
Q ss_pred ---------CCCCCceeEEEEeecC
Q 034318 83 ---------PNPGPGVAWGVIGLDA 98 (98)
Q Consensus 83 ---------GnaG~RiACGvI~~~a 98 (98)
||+|+|||||||++++
T Consensus 172 g~~~~S~~tGnaG~RiACGVI~~s~ 196 (222)
T 2jlp_A 172 GGNQASVENGNAGRRLACCVVGVCG 196 (222)
T ss_dssp SSSTTHHHHTTCCCEEEEEECEECC
T ss_pred CccccccccCCCCceEEEEEEEeec
Confidence 8999999999999864
No 14
>1do5_A Human copper chaperone for superoxide dismutase domain II; beta-barrel; 2.75A {Homo sapiens} SCOP: b.1.8.1
Probab=99.89 E-value=2.9e-24 Score=155.24 Aligned_cols=79 Identities=20% Similarity=0.318 Sum_probs=66.8
Q ss_pred cccccccCCCCccccccCCCCccCCCCCC--------CCCCCCCceEE---------eecCeEEeeCCCCccccEEEEec
Q 034318 17 IGEISSNKYEQYLSGTGLEIELYQPDLDM--------LHCVGIPALAS---------HEHSSVALSGPDSVIGRGLVLHS 79 (98)
Q Consensus 17 ~re~~~~~~gdfssg~~sdgg~ynP~~~~--------~H~gd~p~~~~---------~~d~~i~L~G~~siiGRalVIHa 79 (98)
.+.+|+|++||.+.+|.++|+||||.... .|.||||++.. +.|..++|+ +|+|||||||+
T Consensus 43 ~hg~HIHe~Gd~s~~c~SaG~HfnP~~~~hg~p~~~~~h~GDLgni~~~~~G~a~~~~~d~~~~l~---~iiGRslVIH~ 119 (154)
T 1do5_A 43 LHGLHVHQYGDLTNNCNSCGNHFNPDGASHGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLKVW---DVIGRSLIIDE 119 (154)
T ss_dssp EEEEEEESCCCCTTGGGTTCSBCCTTCCCCCCTTCSSSCTTEEEEEEECTTSEEEEEEEESSCCHH---HHTTSEEEEES
T ss_pred ceeEEEeecCCCCCCcccCcCccCCCCCCCCCCCcccCccccccCeEecCCceEEEEEEccccccc---ccCCeEEEEEe
Confidence 47899999999999999999999998322 27899999865 445555554 89999999999
Q ss_pred CCC-------------CCCCCceeEEEEeecC
Q 034318 80 NPS-------------PNPGPGVAWGVIGLDA 98 (98)
Q Consensus 80 ~~D-------------GnaG~RiACGvI~~~a 98 (98)
++| ||+|+|||||||+.+|
T Consensus 120 ~~Dd~g~g~~~~s~~tGnaG~RiACGvI~~sA 151 (154)
T 1do5_A 120 GEDDLGRGGHPLSKITGNSGERLACGIIARSA 151 (154)
T ss_dssp SCCCTTCSCSTTTTTTTTCCCEEEEEECEEEC
T ss_pred CCccCCCCCCcccccCCCCCCcEEEEEEEeec
Confidence 988 7899999999999876
No 15
>1xtm_B Hypothetical superoxide dismutase-like protein YO; SOD, Cu-Zn SOD, SOD-like, superoxide dismutase mutants, STRU genomics, unknown function; 1.60A {Bacillus subtilis} PDB: 1xtl_B 1s4i_B 1u3n_A
Probab=99.89 E-value=1.6e-23 Score=154.15 Aligned_cols=81 Identities=12% Similarity=0.168 Sum_probs=70.4
Q ss_pred cccccccCCCCcc-ccccCCCCccCCCCC--------CCCCCCCCceE---------EeecCeEEeeC--CCCcc---cc
Q 034318 17 IGEISSNKYEQYL-SGTGLEIELYQPDLD--------MLHCVGIPALA---------SHEHSSVALSG--PDSVI---GR 73 (98)
Q Consensus 17 ~re~~~~~~gdfs-sg~~sdgg~ynP~~~--------~~H~gd~p~~~---------~~~d~~i~L~G--~~sii---GR 73 (98)
.+.+|+|+++|.+ .+|.++|+||||.-. ..|.||||++. .+.|..++|++ +++|+ ||
T Consensus 61 ~hg~HIHe~Gd~s~~~c~SaGgHfnP~~~~Hg~p~~~~~h~GDLgni~~~~~G~a~~~~~d~~i~l~~~~~~sii~~~GR 140 (175)
T 1xtm_B 61 SLGFHIHEKGSCVRPDFESAGGHFNPLNKEHGFNNPMGHHAGDLPNLEVGADGKVDVIMNAPDTSLKKGSKLNILDEDGS 140 (175)
T ss_dssp EECEEEESSCCCCTTTCGGGCSBCCTTCCBSCTTCTTBCCTTBCCCEECCTTSCEEEEEEETTCBCCTTCTTBSSSTTCE
T ss_pred cceEEEecCCccCCCChhhccCccCCCcCCCCCCCccccccccccCeEeCCCCeEEEEEEecceeecCCCccceecCCCc
Confidence 5889999999999 599999999999831 24899999975 46677788887 89999 99
Q ss_pred EEEEecCCC-------CCCCCceeEEEEeec
Q 034318 74 GLVLHSNPS-------PNPGPGVAWGVIGLD 97 (98)
Q Consensus 74 alVIHa~~D-------GnaG~RiACGvI~~~ 97 (98)
|||||+++| ||+|+|||||||+++
T Consensus 141 SiVIH~~~DD~~~~~tGnaG~RiACGvI~~~ 171 (175)
T 1xtm_B 141 AFIIHEQADDYLTNPSGNSGARIVCGALLGN 171 (175)
T ss_dssp EEEEESSCCCSSSTTTTTCCSEEEEEEECC-
T ss_pred EEEEEcCCCCCCCCcCCCCCCcEEEEEEEec
Confidence 999999998 899999999999875
No 16
>2aqm_A Superoxide dismutase [CU-ZN]; oxidoreductase; 1.10A {Brucella abortus}
Probab=99.87 E-value=1.2e-22 Score=146.72 Aligned_cols=79 Identities=19% Similarity=0.229 Sum_probs=65.1
Q ss_pred cccccccCCCCcccccc--------CCCCccCCCCCC--------CCCCCCCceEEeecCeEEe-------eCCCCcccc
Q 034318 17 IGEISSNKYEQYLSGTG--------LEIELYQPDLDM--------LHCVGIPALASHEHSSVAL-------SGPDSVIGR 73 (98)
Q Consensus 17 ~re~~~~~~gdfssg~~--------sdgg~ynP~~~~--------~H~gd~p~~~~~~d~~i~L-------~G~~siiGR 73 (98)
.+.+|+|++||.+++|. ++|+||||.... .|+||||+++...++..++ .+..+|+||
T Consensus 44 ~hGfHIHe~Gdc~~gc~~g~~~~~~SaGgHfnP~~~~~hg~p~~~~h~GDLgni~~~~~G~a~~~~~~~~~~~l~~iiGR 123 (154)
T 2aqm_A 44 YHGFHVHENPSCAPGEKDGKIVPALAAGGHYDPGNTHHHLGPEGDGHMGDLPRLSANADGKVSETVVAPHLKKLAEIKQR 123 (154)
T ss_dssp EECEEEESSSCCCCEEETTEEETTGGGCSBCCTTCCCSCCCTTSSSCTTBCCCEEECTTSCEEEEEEETTCCCGGGGTTE
T ss_pred cceEEEccCCccCCccccccccccccccCCCCCcccccCCCCCccCccccccCeEECCCceEEEEEEcCCcccccccCCc
Confidence 47899999999999886 999999998322 3799999987655544332 135689999
Q ss_pred EEEEecCCC---------CCCCCceeEEEEe
Q 034318 74 GLVLHSNPS---------PNPGPGVAWGVIG 95 (98)
Q Consensus 74 alVIHa~~D---------GnaG~RiACGvI~ 95 (98)
|||||+++| ||||+|||||||+
T Consensus 124 siVIHa~~Dd~~~~s~~tGnaG~RiACGVI~ 154 (154)
T 2aqm_A 124 SLMVHVGGDNYSDKPEPLGGGGARFACGVIE 154 (154)
T ss_dssp EEEEESSCCCSSSSSSGGGGCCSEEEEEEEC
T ss_pred EEEEEecCCcccccccccCCCCCeEEEEEEC
Confidence 999999998 8999999999995
No 17
>2aqp_A Superoxide dismutase [CU-ZN]; electrostatic guidance, neisseria MENI oxidoreductase; 1.30A {Neisseria meningitidis} PDB: 2aqn_A 2aqr_A 2aqq_A 2aqt_C 2aqs_A 2aps_A 1z9p_A
Probab=99.86 E-value=1.9e-22 Score=146.95 Aligned_cols=79 Identities=19% Similarity=0.217 Sum_probs=64.5
Q ss_pred cccccccCCCCcccc--------ccCCCCccCCCC-C--------CCCCCCCCceEEeecCeEEe-------eCCCCccc
Q 034318 17 IGEISSNKYEQYLSG--------TGLEIELYQPDL-D--------MLHCVGIPALASHEHSSVAL-------SGPDSVIG 72 (98)
Q Consensus 17 ~re~~~~~~gdfssg--------~~sdgg~ynP~~-~--------~~H~gd~p~~~~~~d~~i~L-------~G~~siiG 72 (98)
.+.+|+|++||.+++ |.|+|+||||.. . ..|.||||+++...++..++ .|.++|+|
T Consensus 53 ~HGfHIHe~Gdc~~g~~~G~~~~~~SaGgHfnP~~~~~Hg~p~~~~~H~GDLgni~~~~~G~a~~~~~d~~~~gl~~iiG 132 (164)
T 2aqp_A 53 LHGFHIHENPSCEPKEKEGKLTAGLGAGGHWDPKGAKQHGYPWQDDAHLGDLPALTVLHDGTATNPVLAPRLKHLDDVRG 132 (164)
T ss_dssp EECEEEESSSCCCCEEETTEEETTGGGCSBCCTTCCCSCCCTTCTTSCTTBCCCEEECTTSCBCCCEEETTCCCGGGGTT
T ss_pred ceeEEEecCCcccCcccCCcccccccccCccCCcCCCcCCCCCccccccCcccCeEECCCceEEEEEECCCcccccccCC
Confidence 478999999999975 569999999983 1 25899999988755543321 14579999
Q ss_pred cEEEEecCCC---------CCCCCceeEEEEe
Q 034318 73 RGLVLHSNPS---------PNPGPGVAWGVIG 95 (98)
Q Consensus 73 RalVIHa~~D---------GnaG~RiACGvI~ 95 (98)
||||||+++| ||||+|||||||+
T Consensus 133 RslVIHa~~Dd~~~~p~~tGnaG~RiACGVI~ 164 (164)
T 2aqp_A 133 HSIMIHTGGDNHSDHPAPLGGGGPRMACGVIK 164 (164)
T ss_dssp EEEEEESSCCCSSSSSSGGGGCCSEEEEEEEC
T ss_pred cEEEEEecCCcCCCCccccCCCCCcEEEEEeC
Confidence 9999999998 8999999999995
No 18
>1oal_A Superoxide dismutase; oxidoreductase, prokaryotic Cu, protein-subunit interaction recognition, protein electrostatic; 1.5A {Photobacterium leiognathi} SCOP: b.1.8.1 PDB: 1bzo_A 1ibh_A 1ibd_A 1yai_A 1ib5_A 1oaj_A 1ibb_A 1ibf_A
Probab=99.86 E-value=1.2e-22 Score=146.38 Aligned_cols=76 Identities=22% Similarity=0.299 Sum_probs=63.4
Q ss_pred cccccccCCCCcccc--------ccCCCCccCCCC-C--------CCCCCCCCceEEee---------cCeEEeeCCCCc
Q 034318 17 IGEISSNKYEQYLSG--------TGLEIELYQPDL-D--------MLHCVGIPALASHE---------HSSVALSGPDSV 70 (98)
Q Consensus 17 ~re~~~~~~gdfssg--------~~sdgg~ynP~~-~--------~~H~gd~p~~~~~~---------d~~i~L~G~~si 70 (98)
.+.+|+|++||.+++ |.|+|+||||.. . ..|.||||+++... |..++| ++|
T Consensus 41 ~hGfHIHe~Gd~~~g~~~G~~~~~~SaGgHfnP~~~~~Hg~p~~~~~h~GDLgni~~~~~G~a~~~~~~~~i~l---~~i 117 (151)
T 1oal_A 41 EHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPEHTNKHGFPWTDDNHKGDLPALFVSANGLATNPVLAPRLTL---KEL 117 (151)
T ss_dssp EECEEEESSSCCCCEEETTEEETTGGGCSBCCTTCCCCCCCTTCSSSCTTBCCCEEECTTSCBCCCEEETTCCH---HHH
T ss_pred cceEEEccCCcCCCccccCcccccccccCCcCCCCCCCCCCCCccccccccccCeEECCCCeEEEEEEcCcCCh---hhc
Confidence 478999999999986 569999999983 1 24899999987644 444555 589
Q ss_pred cccEEEEecCCC---------CCCCCceeEEEEe
Q 034318 71 IGRGLVLHSNPS---------PNPGPGVAWGVIG 95 (98)
Q Consensus 71 iGRalVIHa~~D---------GnaG~RiACGvI~ 95 (98)
+|||||||+++| ||||+|||||||+
T Consensus 118 iGRslVIH~~~Dd~~~~p~~tGnaG~RiACGvI~ 151 (151)
T 1oal_A 118 KGHAIMIHAGGDNHSDMPKALGGGGARVACGVIQ 151 (151)
T ss_dssp TTCEEEEESSCCCSSSSSSGGGGCCSEEEEEECC
T ss_pred CCeEEEEEecCCcCCCCccccCCCCCcEEEEEeC
Confidence 999999999998 8999999999995
No 19
>1eqw_A Cu,Zn superoxide dismutase; greek KEY B-barrel, oxidoreductase; 2.30A {Salmonella typhimurium} SCOP: b.1.8.1 PDB: 2wn0_A* 2wn1_A* 2wwn_A* 2wwo_A*
Probab=99.86 E-value=2.3e-22 Score=145.38 Aligned_cols=79 Identities=18% Similarity=0.267 Sum_probs=64.0
Q ss_pred cccccccCCCCcccc--------ccCCCCccCCCC-C--------CCCCCCCCceEEeecCeEEe-------eCCCCccc
Q 034318 17 IGEISSNKYEQYLSG--------TGLEIELYQPDL-D--------MLHCVGIPALASHEHSSVAL-------SGPDSVIG 72 (98)
Q Consensus 17 ~re~~~~~~gdfssg--------~~sdgg~ynP~~-~--------~~H~gd~p~~~~~~d~~i~L-------~G~~siiG 72 (98)
.+.+|+|++||.+++ |.++|+||||.. . ..|+||||+++...++..++ .+.++|+|
T Consensus 44 ~hGfHIHe~Gd~~~g~~~G~~~~~~SaGgHfnP~~~~~Hg~p~~~~~h~GDLgni~~~~~G~a~~~~~~~~~~~l~~iiG 123 (156)
T 1eqw_A 44 IHGFHVHTNPSCMPGMKDGKEVPALMAGGHLDPEKTGKHLGPYNDKGHLGDLPGLVVNADGTATYPLLAPRLKSLSELKG 123 (156)
T ss_dssp EECEEEESSSCCCCEEETTEEETTGGGCSBCCTTCCCCCCCTTCTTSCTTBCCCEEECTTSCBCCCEEETTCCCGGGGTT
T ss_pred ceeEEECCCCcCCCcccCCcccccccccCccCCCCCCcCCCCCccccccccccCeEECCCCeEEEEEEcCccccccccCC
Confidence 478999999999975 569999999983 1 24899999987654443321 12478999
Q ss_pred cEEEEecCCC---------CCCCCceeEEEEe
Q 034318 73 RGLVLHSNPS---------PNPGPGVAWGVIG 95 (98)
Q Consensus 73 RalVIHa~~D---------GnaG~RiACGvI~ 95 (98)
||||||+++| ||||+|||||||+
T Consensus 124 RsiVIH~~~Dd~~~~p~~tGnaG~RiACGvI~ 155 (156)
T 1eqw_A 124 HSLMIHKGGDNYSDKPAPLGGGGARFACGVIE 155 (156)
T ss_dssp EEEEEESSCCCSSSSSSSGGGCCSEEEEEEEC
T ss_pred cEEEEeecCCccccCccccCCCCCcEEEEEEe
Confidence 9999999998 8999999999997
No 20
>1eso_A SOD, Cu, Zn superoxide dismutase; oxidoreductase, monomeric superoxide dismutase, copper enzymes, enzyme evolution, X- RAY; 2.00A {Escherichia coli} SCOP: b.1.8.1 PDB: 2k4w_A
Probab=99.86 E-value=2.9e-22 Score=144.59 Aligned_cols=79 Identities=16% Similarity=0.147 Sum_probs=63.9
Q ss_pred cccccccCCCCcccc--------ccCCCCccCCCC-C-------CCCCCCCCceEEeecCeEEe-------eCCCCcccc
Q 034318 17 IGEISSNKYEQYLSG--------TGLEIELYQPDL-D-------MLHCVGIPALASHEHSSVAL-------SGPDSVIGR 73 (98)
Q Consensus 17 ~re~~~~~~gdfssg--------~~sdgg~ynP~~-~-------~~H~gd~p~~~~~~d~~i~L-------~G~~siiGR 73 (98)
.+.+|+|+++|.+++ |.++|+||||.. . ..|.||||+++...++..++ .+.++|+||
T Consensus 44 ~hGfHIHe~Gd~~~g~~~G~~~~~~SaGgHfnP~~~~~Hg~p~~~~h~GDLgni~~~~~G~a~~~~~~~~~~~l~~iiGR 123 (154)
T 1eso_A 44 EHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHEGPEGAGHLGDLPALVVNNDGKATDAVIAPRLKSLDEIKDK 123 (154)
T ss_dssp EECEEEESSSCCCCBCCSSSCBTTGGGCSBCCTTCCCCCCCTTSSSCTTBCCCEEECTTSCBCCCEEETTCCCGGGGTTE
T ss_pred cccEEEcCCCccCCcccCCccccccccccccCCcCCCcCCCCCCCCccccccCeEECCCCeEEEEEEccccccccccCCe
Confidence 478999999999986 458999999983 1 25899999987654443321 124689999
Q ss_pred EEEEecCCC---------CCCCCceeEEEEe
Q 034318 74 GLVLHSNPS---------PNPGPGVAWGVIG 95 (98)
Q Consensus 74 alVIHa~~D---------GnaG~RiACGvI~ 95 (98)
|||||+++| ||||+|||||||+
T Consensus 124 siVIH~~~Dd~~~~p~~tGnaG~RiACGvI~ 154 (154)
T 1eso_A 124 ALMVHVGGDNMSDQPKPLGGGGERYACGVIK 154 (154)
T ss_dssp EEEEESSCCCSSSSSSGGGGCCSEEEEEEEC
T ss_pred EEEEEecCCccccCccccCCCCCcEEEEEEC
Confidence 999999998 8999999999995
No 21
>1pzs_A Superoxide dismutase [CU-ZN]; Cu-protein, beta core, antioxidant, metal binding, greek KEY barrel, oxidoreductase; 1.63A {Mycobacterium tuberculosis} SCOP: b.1.8.1
Probab=99.85 E-value=4e-22 Score=150.29 Aligned_cols=80 Identities=14% Similarity=0.119 Sum_probs=68.5
Q ss_pred cccccccCCCCccc-----------cccCCCCccCCCC--CCCCCCCCCceEE---------eecCeEEeeCCCCccccE
Q 034318 17 IGEISSNKYEQYLS-----------GTGLEIELYQPDL--DMLHCVGIPALAS---------HEHSSVALSGPDSVIGRG 74 (98)
Q Consensus 17 ~re~~~~~~gdfss-----------g~~sdgg~ynP~~--~~~H~gd~p~~~~---------~~d~~i~L~G~~siiGRa 74 (98)
.+-+|+|+++|.+. +|.++|+||||.- +..|.||||+++. +.|..++|++..+|+|||
T Consensus 80 ~HGfHIHe~Gdcs~~~~~~~~G~~~~c~SAGgHfNP~~~~g~P~~GDLgni~v~~dG~a~~~~~d~~l~L~~~~siiGRS 159 (208)
T 1pzs_A 80 FHGLHIHQVGKCEPNSVAPTGGAPGNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTA 159 (208)
T ss_dssp EECEEEESSCCCCSSBCCTTCCSCBTTGGGCSBCCCTTCCSSSCTTBCCCEEECTTSCCEEEEEESSCCHHHHHSTTCCE
T ss_pred ceeEEEecCCcccCcccccccCcccCcccccCcCCCCCCCCCCccccCcCcEeCCCceEEEEEEeCCcccCCCCCCCCCE
Confidence 47899999999987 7899999999983 1248899999863 566777788888999999
Q ss_pred EEEecCCC--------------------------CCCCCceeEEEEee
Q 034318 75 LVLHSNPS--------------------------PNPGPGVAWGVIGL 96 (98)
Q Consensus 75 lVIHa~~D--------------------------GnaG~RiACGvI~~ 96 (98)
||||+++| ||+|+|||||||+.
T Consensus 160 iVIHa~~Dd~~~~P~~~~~~~~~~~g~~~~s~~tGnaG~RiACGVI~~ 207 (208)
T 1pzs_A 160 IIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGS 207 (208)
T ss_dssp EEEESSCCCTTCCCTTTCBCTTSCBSCCHHHHHHTTCCSEEEEEESBC
T ss_pred EEEeecCcccccccccccccccccCCCcccccccCCCcccEEEEEEeC
Confidence 99999887 48999999999975
No 22
>1z9n_A Superoxide dismutase [CU-ZN]; Cu-Zn SOD, SOD, oxidoreductase; HET: HEM; 1.50A {Haemophilus ducreyi}
Probab=99.84 E-value=8.7e-22 Score=145.30 Aligned_cols=79 Identities=20% Similarity=0.214 Sum_probs=63.9
Q ss_pred cccccccCCCCcccc--------ccCCCCccCCCC-C--------CCCCCCCCceEEeecCeEEe-------eCCCCccc
Q 034318 17 IGEISSNKYEQYLSG--------TGLEIELYQPDL-D--------MLHCVGIPALASHEHSSVAL-------SGPDSVIG 72 (98)
Q Consensus 17 ~re~~~~~~gdfssg--------~~sdgg~ynP~~-~--------~~H~gd~p~~~~~~d~~i~L-------~G~~siiG 72 (98)
.+.+|+|++||.+++ |.|+|+||||.. . ..|+||||+++...++..++ .+.++|+|
T Consensus 66 ~HGfHIHe~Gdcs~g~~dG~~~~c~SaGgHfnP~~~~~Hg~P~~~~~H~GDLgni~~~~~G~a~~~~~d~~l~~l~~iiG 145 (177)
T 1z9n_A 66 LHGFHIHEKPSCEPKEKDGKLVAGLGAGGHWDPKQTQKHGYPWSDDAHMGDLPALFVMHDGSATTPVLAPRLKKLAEVKG 145 (177)
T ss_dssp EECEEEESSSCCCCEECSSSEETTGGGCSBCCTTCCCCCCCTTCTTSCTTBCCCEEECTTSCBCCCEEETTCCCGGGGTT
T ss_pred ceeEEEecCCccccccccCcccccccccCccCCCCCCCCCCCCCCCCccccccCeEECCCceEEEEEEecCcccccccCC
Confidence 478999999999975 569999999983 1 24899999987655443321 12478999
Q ss_pred cEEEEecCCC---------CCCCCceeEEEEe
Q 034318 73 RGLVLHSNPS---------PNPGPGVAWGVIG 95 (98)
Q Consensus 73 RalVIHa~~D---------GnaG~RiACGvI~ 95 (98)
||||||+++| ||||+|||||||+
T Consensus 146 RSiVIHa~~DD~~~~p~~tGnaG~RiACGVI~ 177 (177)
T 1z9n_A 146 HSLMIHAGGDNHSDHPAPLGGGGPRMACGVIK 177 (177)
T ss_dssp EEEEEESSCCCSSSSSSGGGGCCSEEEEEEEC
T ss_pred eEEEEEeCCCCCCCCccccCCCCCeEEEEEeC
Confidence 9999999998 8999999999995
No 23
>1ej8_A Lys7; beta barrel, copper chaperone for SOD, domain 2; 1.55A {Saccharomyces cerevisiae} SCOP: b.1.8.1
Probab=99.83 E-value=6.5e-22 Score=141.55 Aligned_cols=76 Identities=14% Similarity=-0.018 Sum_probs=62.7
Q ss_pred cccccccCCCCccccccCCCCccCCCCCCCCCCCCCceEEee-cCeEEe-----eCCCCccccEEEEecCCC-------C
Q 034318 17 IGEISSNKYEQYLSGTGLEIELYQPDLDMLHCVGIPALASHE-HSSVAL-----SGPDSVIGRGLVLHSNPS-------P 83 (98)
Q Consensus 17 ~re~~~~~~gdfssg~~sdgg~ynP~~~~~H~gd~p~~~~~~-d~~i~L-----~G~~siiGRalVIHa~~D-------G 83 (98)
.+.+|+|++||.+.+|.|+|+||||. ...| |||||+.... ++..++ ....+|+|||||||+++| +
T Consensus 51 ~HGfHIHe~Gd~s~g~~SaG~HfnP~-~~~h-GDLgni~~~~~~G~a~~~~~~~i~l~~iiGRslVVHa~~DD~~~~~~~ 128 (140)
T 1ej8_A 51 NYHASIHEKGDVSKGVESTGKVWHKF-DEPI-ECFNESDLGKNLYSGKTFLSAPLPTWQLIGRSFVISKSLNHPENEPSS 128 (140)
T ss_dssp EEEEEEESCCCCTTGGGGSCSEEEEC-CSCE-EECEEEETTTTEEEEEEEEEESCCGGGTTTSEEEEEEECSCGGGSCSS
T ss_pred eeEEEEcCCCCCCCCcccccCccCCC-CCcc-cccCCEEEecCCcEEEEEECCCcCcceeCCeEEEEECCCCcCCCCCCC
Confidence 47899999999999999999999999 7778 9999987655 433321 123589999999999999 3
Q ss_pred CCCCceeEEEEe
Q 034318 84 NPGPGVAWGVIG 95 (98)
Q Consensus 84 naG~RiACGvI~ 95 (98)
+ ++|+|||||+
T Consensus 129 ~-s~RiACGVI~ 139 (140)
T 1ej8_A 129 V-KDYSFLGVIA 139 (140)
T ss_dssp C-CEEEEEEECB
T ss_pred C-CceEEEEEEe
Confidence 4 4999999997
No 24
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.82 E-value=4.5e-22 Score=151.80 Aligned_cols=80 Identities=15% Similarity=-0.009 Sum_probs=66.7
Q ss_pred cccccccCCCCccccccCCCCccCCCCCCCCCCCCCceEEee-cCeEEe-----eCCCCccccEEEEecCCC------CC
Q 034318 17 IGEISSNKYEQYLSGTGLEIELYQPDLDMLHCVGIPALASHE-HSSVAL-----SGPDSVIGRGLVLHSNPS------PN 84 (98)
Q Consensus 17 ~re~~~~~~gdfssg~~sdgg~ynP~~~~~H~gd~p~~~~~~-d~~i~L-----~G~~siiGRalVIHa~~D------Gn 84 (98)
.+.+|+|++||.+.+|.|+|+||||. +..| |||||+.... ++..++ ....+|+|||||||+++| ++
T Consensus 128 ~hg~hiHe~Gd~~~g~~saG~h~np~-~~~h-GDlgni~~~~~~G~a~~~~~~~~~l~~iiGrs~vvh~~~Dd~~~~~~~ 205 (249)
T 1jk9_B 128 NYHASIHEKGDVSKGVESTGKVWHKF-DEPI-ECFNESDLGKNLYSGKTFLSAPLPTWQLIGRSFVISKSLNHPENEPSS 205 (249)
T ss_dssp EEEEEEESCCCCTTGGGGGCSEEEEC-CSCE-EECEECSSCTTCEEEEEEEEESCCHHHHTTSEEEEEEECSCGGGSSSS
T ss_pred cEeEEEEeCCCCCCCcccccCCcCCC-CCCc-cccCCEEecCCCceEEEEECCCCCccccCCeEEEEECCCccCCCCCCC
Confidence 47899999999999999999999999 7778 9999987655 443321 122589999999999999 45
Q ss_pred CCCceeEEEEeecC
Q 034318 85 PGPGVAWGVIGLDA 98 (98)
Q Consensus 85 aG~RiACGvI~~~a 98 (98)
+|+|+|||||+.+|
T Consensus 206 ~~~r~aCGvI~~~~ 219 (249)
T 1jk9_B 206 VKDYSFLGVIARSA 219 (249)
T ss_dssp CCEEEEEEECEECC
T ss_pred CCCcEEEEEEeecc
Confidence 78999999999875
No 25
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.82 E-value=5.5e-22 Score=148.65 Aligned_cols=80 Identities=15% Similarity=-0.015 Sum_probs=66.0
Q ss_pred cccccccCCCCccccccCCCCccCCCCCCCCCCCCCceEEee-cCeEEee-----CCCCccccEEEEecCCC----C--C
Q 034318 17 IGEISSNKYEQYLSGTGLEIELYQPDLDMLHCVGIPALASHE-HSSVALS-----GPDSVIGRGLVLHSNPS----P--N 84 (98)
Q Consensus 17 ~re~~~~~~gdfssg~~sdgg~ynP~~~~~H~gd~p~~~~~~-d~~i~L~-----G~~siiGRalVIHa~~D----G--n 84 (98)
.+.+|+|++||.+.+|.|+|+||||. +..| |||||+.... ++..+++ ...+|+|||||||+++| | .
T Consensus 127 ~hg~hiHe~Gd~~~g~~saG~h~np~-~~~h-GDlgni~~~~~~G~a~~~~~~~~~l~~iiGrs~vvh~~~Dd~~~~~~~ 204 (222)
T 1qup_A 127 NYHASIHEKGDVSKGVESTGKVWHKF-DEPI-ECFNESDLGKNLYSGKTFLSAPLPTWQLIGRSFVISKSLNHPENEPSS 204 (222)
T ss_dssp EEEEEEESCCCCTTGGGGGCSEEEEC-CSCE-EECEEETTEEEEEEEEEEEEESCCHHHHTTSEEEEEEECSCGGGCTTC
T ss_pred cEeEEEcCCCCCCCCcccccCCcCCC-CCcc-CccCCEEecCCCcEEEEEECCCcCccccCCeEEEEEcCCccCCCCCCC
Confidence 47899999999999999999999999 7778 9999987655 4433211 22589999999999999 2 2
Q ss_pred CCCceeEEEEeecC
Q 034318 85 PGPGVAWGVIGLDA 98 (98)
Q Consensus 85 aG~RiACGvI~~~a 98 (98)
.|+|+|||||+.+|
T Consensus 205 ~~~r~aCgvI~~~a 218 (222)
T 1qup_A 205 VKDYSFLGVIARSA 218 (222)
T ss_dssp CCEEEEEEECEEEC
T ss_pred CCCcEEEEEEEEec
Confidence 57999999999876
No 26
>1hf2_A MINC, septum site-determining protein MINC; cell division protein, FTSZ, bacterial cell division, beta helix; 2.2A {Thermotoga maritima} SCOP: b.80.3.1 c.102.1.1
Probab=53.24 E-value=13 Score=26.87 Aligned_cols=34 Identities=18% Similarity=0.074 Sum_probs=24.1
Q ss_pred EeecCeEEeeCCCCccccEEEEecCCCCCCCCceeEEEE
Q 034318 56 SHEHSSVALSGPDSVIGRGLVLHSNPSPNPGPGVAWGVI 94 (98)
Q Consensus 56 ~~~d~~i~L~G~~siiGRalVIHa~~DGnaG~RiACGvI 94 (98)
.+.++.|-++| .+-|| +|||..||..+||.|=-+
T Consensus 132 ViA~GnI~V~G--~LrG~---a~AGa~Gn~~A~I~a~~l 165 (210)
T 1hf2_A 132 ILAGGSVVVFG--KAQGN---IRAGLNEGGQAVVAALDL 165 (210)
T ss_dssp EEESSCEEEEE--EECSE---EEECTTTCTTCEEEEEEE
T ss_pred EEeCCcEEEEE--eeceE---EEeCCCCCCCcEEEeccC
Confidence 34556666665 33476 589999999999999643
Done!