BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034326
MATPPVPVVASLAKVKLFSIMPSSSSSSRSRPSHSLKSKPALCAPVKQEVEVGIMCESCN
GKGWLVCDFCGGQKTNVKAQNNRIYRRCPTCRAVSTPI

High Scoring Gene Products

Symbol, full name Information P value
AT2G24395 protein from Arabidopsis thaliana 2.0e-17

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034326
        (98 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:504955942 - symbol:AT2G24395 "AT2G24395" speci...   213  2.0e-17   1


>TAIR|locus:504955942 [details] [associations]
            symbol:AT2G24395 "AT2G24395" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:BT011725 EMBL:AK221846
            IPI:IPI00527626 RefSeq:NP_850052.1 UniGene:At.47162 PRIDE:Q6NMD5
            EnsemblPlants:AT2G24395.1 GeneID:816975 KEGG:ath:AT2G24395
            TAIR:At2g24395 eggNOG:NOG261740 HOGENOM:HOG000143354
            InParanoid:Q6NMD5 OMA:GQKTNVK PhylomeDB:Q6NMD5
            ProtClustDB:CLSN2690895 Genevestigator:Q6NMD5 Uniprot:Q6NMD5
        Length = 132

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 34/41 (82%), Positives = 39/41 (95%)

Query:    54 IMCESCNGKGWLVCDFCGGQKTNVKAQNNRIYRRCPTCRAV 94
             I+CE CNGKGWL+CDFC GQKTNVK++NNRIYRRCPTC+AV
Sbjct:    65 ILCEDCNGKGWLLCDFCKGQKTNVKSENNRIYRRCPTCKAV 105


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.135   0.444    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       98        79   0.00091  102 3  11 22  0.36    29
                                                     29  0.39    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  548 (58 KB)
  Total size of DFA:  110 KB (2073 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.30u 0.16s 7.46t   Elapsed:  00:00:00
  Total cpu time:  7.30u 0.16s 7.46t   Elapsed:  00:00:00
  Start:  Fri May 10 21:14:15 2013   End:  Fri May 10 21:14:15 2013

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