Query 034327
Match_columns 98
No_of_seqs 22 out of 24
Neff 2.2
Searched_HMMs 13730
Date Mon Mar 25 21:09:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034327.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/034327hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2ct1a2 g.37.1.1 (A:8-43) Tran 45.6 2.7 0.0002 22.0 0.5 11 20-30 2-12 (36)
2 d1x6ea1 g.37.1.1 (A:8-40) Zinc 40.8 3.4 0.00025 21.5 0.4 11 21-31 2-12 (33)
3 d1p7aa_ g.37.1.1 (A:) Kruppel- 38.9 5.2 0.00038 20.7 1.0 13 19-31 4-16 (37)
4 d1srka_ g.37.1.1 (A:) Zinc fin 37.0 4.8 0.00035 21.1 0.6 10 21-30 2-11 (35)
5 d2epsa1 g.37.1.1 (A:408-446) P 35.2 6.5 0.00047 21.0 1.0 11 20-30 28-38 (39)
6 d1x6ha2 g.37.1.1 (A:8-43) Tran 34.8 5 0.00036 20.8 0.5 12 20-31 2-13 (36)
7 d1ix9a1 a.2.11.1 (A:1-90) Mn s 33.6 4.7 0.00034 24.6 0.3 8 54-61 82-89 (90)
8 d2cota2 g.37.1.1 (A:7-44) Zinc 28.9 9.3 0.00068 19.7 1.0 13 19-31 5-17 (38)
9 d1my6a1 a.2.11.1 (A:1-88) Fe s 27.7 6.8 0.0005 23.5 0.3 32 29-61 49-87 (88)
10 d1ma1a1 a.2.11.1 (A:4-91) Fe s 23.2 9.3 0.00068 23.0 0.3 8 54-61 78-85 (88)
11 d1mnga1 a.2.11.1 (A:1-92) Mn s 22.5 12 0.00091 22.6 0.8 8 54-61 84-91 (92)
12 d1idsa1 a.2.11.1 (A:2-85) Fe s 22.3 12 0.0009 22.3 0.7 8 54-61 76-83 (84)
13 d2p4ka1 a.2.11.1 (A:1-83) Mn s 21.8 11 0.0008 22.5 0.4 8 54-61 75-82 (83)
14 d1p7ga1 a.2.11.1 (A:12-103) Fe 20.9 7.3 0.00053 23.7 -0.6 13 53-65 79-91 (92)
No 1
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.65 E-value=2.7 Score=21.97 Aligned_cols=11 Identities=27% Similarity=0.486 Sum_probs=9.3
Q ss_pred CCCCCCcCccc
Q 034327 20 EHRQPKAHRCN 30 (98)
Q Consensus 20 ~~~~~rpHRCN 30 (98)
.|.+.|||.|+
T Consensus 2 ~HTgekP~~C~ 12 (36)
T d2ct1a2 2 THSGEKPYECY 12 (36)
T ss_dssp CCSCCCSEECT
T ss_pred ccCCCCCEeCC
Confidence 47899999996
No 2
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.84 E-value=3.4 Score=21.51 Aligned_cols=11 Identities=27% Similarity=0.504 Sum_probs=9.3
Q ss_pred CCCCCcCccch
Q 034327 21 HRQPKAHRCND 31 (98)
Q Consensus 21 ~~~~rpHRCND 31 (98)
|.+.|||.|+.
T Consensus 2 HTgekpy~C~~ 12 (33)
T d1x6ea1 2 HSGEKPYGCVE 12 (33)
T ss_dssp TTTCCCEECSS
T ss_pred cCCCCCeeCCC
Confidence 67899999984
No 3
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}
Probab=38.95 E-value=5.2 Score=20.72 Aligned_cols=13 Identities=23% Similarity=0.371 Sum_probs=10.5
Q ss_pred CCCCCCCcCccch
Q 034327 19 GEHRQPKAHRCND 31 (98)
Q Consensus 19 ~~~~~~rpHRCND 31 (98)
-.|.+.|||.|+.
T Consensus 4 R~HTgeKPy~C~~ 16 (37)
T d1p7aa_ 4 RGSTGIKPFQCPD 16 (37)
T ss_dssp STTCCSSSBCCTT
T ss_pred CccCCccCeEeCC
Confidence 3578999999974
No 4
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=36.97 E-value=4.8 Score=21.12 Aligned_cols=10 Identities=10% Similarity=0.358 Sum_probs=8.5
Q ss_pred CCCCCcCccc
Q 034327 21 HRQPKAHRCN 30 (98)
Q Consensus 21 ~~~~rpHRCN 30 (98)
+.+.|||.|+
T Consensus 2 ~TGekPy~C~ 11 (35)
T d1srka_ 2 SSGKRPFVCR 11 (35)
T ss_dssp CSCCSCEECS
T ss_pred CCCCccccCC
Confidence 6789999996
No 5
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.22 E-value=6.5 Score=20.96 Aligned_cols=11 Identities=27% Similarity=0.833 Sum_probs=9.1
Q ss_pred CCCCCCcCccc
Q 034327 20 EHRQPKAHRCN 30 (98)
Q Consensus 20 ~~~~~rpHRCN 30 (98)
-|.+.|||.|+
T Consensus 28 ~Ht~ekpy~C~ 38 (39)
T d2epsa1 28 VHTSERPHKCQ 38 (39)
T ss_dssp TSCCCCCCCSS
T ss_pred ccCCCcCcCCc
Confidence 37889999996
No 6
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.84 E-value=5 Score=20.76 Aligned_cols=12 Identities=25% Similarity=0.492 Sum_probs=9.8
Q ss_pred CCCCCCcCccch
Q 034327 20 EHRQPKAHRCND 31 (98)
Q Consensus 20 ~~~~~rpHRCND 31 (98)
.|.+.||+.|+.
T Consensus 2 ~HTgekPy~C~~ 13 (36)
T d1x6ha2 2 THTGEKPYACSH 13 (36)
T ss_dssp TCCCCCCEECSS
T ss_pred CCCCCCCEECCC
Confidence 478899999974
No 7
>d1ix9a1 a.2.11.1 (A:1-90) Mn superoxide dismutase (MnSOD) {Escherichia coli [TaxId: 562]}
Probab=33.65 E-value=4.7 Score=24.64 Aligned_cols=8 Identities=38% Similarity=1.261 Sum_probs=6.8
Q ss_pred HHHHHHHh
Q 034327 54 KLFWQCMR 61 (98)
Q Consensus 54 kLfwrCmR 61 (98)
.+||+||+
T Consensus 82 ~~fW~~mk 89 (90)
T d1ix9a1 82 SLFWKGLK 89 (90)
T ss_dssp HHHHHTBC
T ss_pred HHHHHHhc
Confidence 58999996
No 8
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.91 E-value=9.3 Score=19.71 Aligned_cols=13 Identities=15% Similarity=0.600 Sum_probs=10.6
Q ss_pred CCCCCCCcCccch
Q 034327 19 GEHRQPKAHRCND 31 (98)
Q Consensus 19 ~~~~~~rpHRCND 31 (98)
-.|.+.|||.|+.
T Consensus 5 ~~Ht~ekpy~C~~ 17 (38)
T d2cota2 5 WQQRERRRYKCDE 17 (38)
T ss_dssp SCCCCSCSSBCSS
T ss_pred cccCCCCCEecCC
Confidence 4578899999984
No 9
>d1my6a1 a.2.11.1 (A:1-88) Fe superoxide dismutase (FeSOD) {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=27.74 E-value=6.8 Score=23.51 Aligned_cols=32 Identities=25% Similarity=0.627 Sum_probs=18.6
Q ss_pred cchhHHHHHHHHhcCCCCcc-cC----ch--HHHHHHHHh
Q 034327 29 CNDRAEDVIQACFEGNPFKT-VP----GP--FKLFWQCMR 61 (98)
Q Consensus 29 CNDR~eDvlqa~fegnp~~t-vp----~~--fkLfwrCmR 61 (98)
++..++++|.... ++.... +. +- =.+||+||+
T Consensus 49 ~~~~l~~ii~~~~-~~~~~~~v~nnagg~~NH~~fW~~m~ 87 (88)
T d1my6a1 49 ADKSLEDVIRTTY-GDAAKVGIFNNAAQVWNHTFFWNSLK 87 (88)
T ss_dssp GGSCHHHHHHHHT-TCTTCHHHHHHHHHHHHHHHHHHTBC
T ss_pred HhcCHHHHHHHHH-HhHHHHHHHhcchhHhhHHHHHhccC
Confidence 4556888887764 333221 11 22 268999995
No 10
>d1ma1a1 a.2.11.1 (A:4-91) Fe superoxide dismutase (FeSOD) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=23.15 E-value=9.3 Score=23.04 Aligned_cols=8 Identities=38% Similarity=0.899 Sum_probs=6.8
Q ss_pred HHHHHHHh
Q 034327 54 KLFWQCMR 61 (98)
Q Consensus 54 kLfwrCmR 61 (98)
.+||+||.
T Consensus 78 s~fW~~m~ 85 (88)
T d1ma1a1 78 LFFWGNMG 85 (88)
T ss_dssp HHHHHTBC
T ss_pred HHHhcccC
Confidence 68999996
No 11
>d1mnga1 a.2.11.1 (A:1-92) Mn superoxide dismutase (MnSOD) {Thermus thermophilus [TaxId: 274]}
Probab=22.50 E-value=12 Score=22.61 Aligned_cols=8 Identities=38% Similarity=1.161 Sum_probs=6.5
Q ss_pred HHHHHHHh
Q 034327 54 KLFWQCMR 61 (98)
Q Consensus 54 kLfwrCmR 61 (98)
.+||+||.
T Consensus 84 ~~fW~~m~ 91 (92)
T d1mnga1 84 SLFWRLLT 91 (92)
T ss_dssp HHHHHHTC
T ss_pred HHHHcccC
Confidence 48999984
No 12
>d1idsa1 a.2.11.1 (A:2-85) Fe superoxide dismutase (FeSOD) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=22.35 E-value=12 Score=22.34 Aligned_cols=8 Identities=13% Similarity=0.958 Sum_probs=6.5
Q ss_pred HHHHHHHh
Q 034327 54 KLFWQCMR 61 (98)
Q Consensus 54 kLfwrCmR 61 (98)
.+||+||.
T Consensus 76 ~~fW~~m~ 83 (84)
T d1idsa1 76 TIWWKNLS 83 (84)
T ss_dssp HHHHHHBC
T ss_pred HHHhcccC
Confidence 58999984
No 13
>d2p4ka1 a.2.11.1 (A:1-83) Mn superoxide dismutase (MnSOD) {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.82 E-value=11 Score=22.47 Aligned_cols=8 Identities=25% Similarity=1.037 Sum_probs=6.4
Q ss_pred HHHHHHHh
Q 034327 54 KLFWQCMR 61 (98)
Q Consensus 54 kLfwrCmR 61 (98)
.+||+||.
T Consensus 75 ~~fW~~m~ 82 (83)
T d2p4ka1 75 SIFWTNLS 82 (83)
T ss_dssp HHHHHTBC
T ss_pred HHHhcccC
Confidence 58999984
No 14
>d1p7ga1 a.2.11.1 (A:12-103) Fe superoxide dismutase (FeSOD) {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=20.90 E-value=7.3 Score=23.72 Aligned_cols=13 Identities=23% Similarity=0.585 Sum_probs=9.4
Q ss_pred HHHHHHHHhcCCC
Q 034327 53 FKLFWQCMRSKPG 65 (98)
Q Consensus 53 fkLfwrCmRSk~G 65 (98)
=.+||+||...-|
T Consensus 79 H~~fW~~m~P~gg 91 (92)
T d1p7ga1 79 HSIFWPNMAPPGK 91 (92)
T ss_dssp HHHHTTTBCSBTT
T ss_pred HHHHHhccCCCCC
Confidence 3689999976543
Done!