Query 034333
Match_columns 97
No_of_seqs 69 out of 71
Neff 2.7
Searched_HMMs 13730
Date Mon Mar 25 21:15:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034333.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/034333hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2guja1 b.106.1.3 (A:5-143) Ph 64.5 0.57 4.2E-05 31.4 -0.3 15 66-80 119-133 (139)
2 d1mkea1 b.55.1.4 (A:31-144) Ac 49.7 6.9 0.0005 24.4 3.1 39 55-97 75-113 (114)
3 d1texa_ c.37.1.5 (A:) Stf0 sul 33.5 15 0.0011 21.5 2.7 51 24-75 210-265 (265)
4 d1xoda1 b.55.1.4 (A:10-123) Sp 24.7 24 0.0017 22.6 2.6 35 57-95 75-109 (114)
5 d1egxa_ b.55.1.4 (A:) Vasodila 23.6 34 0.0025 20.7 3.1 33 59-95 79-111 (115)
6 d1nm3a1 c.47.1.1 (A:166-239) C 20.6 17 0.0012 19.9 1.0 12 85-96 16-27 (74)
7 d1aym3_ b.121.4.1 (3:) Rhinovi 19.3 15 0.0011 25.9 0.7 21 4-24 92-112 (238)
8 d1q33a_ d.113.1.1 (A:) NUDT9 ( 18.2 28 0.0021 24.5 2.1 36 53-92 244-279 (292)
9 d1lrza2 d.108.1.4 (A:1-165) Me 17.9 43 0.0032 21.4 2.8 22 76-97 79-100 (165)
10 d1chma1 c.55.2.1 (A:2-156) Cre 16.6 61 0.0044 19.3 3.2 26 70-96 11-36 (155)
No 1
>d2guja1 b.106.1.3 (A:5-143) Phage-like element PBSX protein XkdM {Bacillus subtilis [TaxId: 1423]}
Probab=64.52 E-value=0.57 Score=31.36 Aligned_cols=15 Identities=53% Similarity=0.742 Sum_probs=10.0
Q ss_pred ccccccccccccchH
Q 034333 66 REYAEEELPLTFSDR 80 (97)
Q Consensus 66 r~~~~ee~pltfsd~ 80 (97)
.|.++||+||||+|=
T Consensus 119 ~e~~Eee~~FtF~~~ 133 (139)
T d2guja1 119 SEALEEEVPFTFEDF 133 (139)
T ss_dssp ----CCEEEECCSEE
T ss_pred CceEEEEccceecCc
Confidence 478899999999973
No 2
>d1mkea1 b.55.1.4 (A:31-144) Actin regulatory protein WASP {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=49.71 E-value=6.9 Score=24.41 Aligned_cols=39 Identities=10% Similarity=0.284 Sum_probs=31.3
Q ss_pred CCCCcccccccccccccccccccchHHHHHHHHHHHHHHhhhC
Q 034333 55 GESGSTGWSDQREYAEEELPLTFSDRAVVRSFSRRAKKFIKKR 97 (97)
Q Consensus 55 ~~~~~~~~~~~r~~~~ee~pltfsd~~~~~~fs~~~k~~~~~~ 97 (97)
+....+.|-+ .+-.+-|.|.|...++.|.++....+++|
T Consensus 75 ~~~~Fh~~~~----~~~~~GL~F~~~~eA~~f~~~i~~~~~~~ 113 (114)
T d1mkea1 75 PRGYFHTFAG----DTCQVALNFANEEEAKKFRKAVTDLLGRR 113 (114)
T ss_dssp SSSSEEEEEC----SSSEEEEEESSHHHHHHHHHHHHHHHHHC
T ss_pred cCCeEEEEEc----CCceEEEeeCCHHHHHHHHHHHHHHHhcc
Confidence 4455788843 23467899999999999999999998876
No 3
>d1texa_ c.37.1.5 (A:) Stf0 sulfotransferase {Mycobacterium smegmatis [TaxId: 1772]}
Probab=33.51 E-value=15 Score=21.49 Aligned_cols=51 Identities=16% Similarity=0.292 Sum_probs=24.0
Q ss_pred chhH---HHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccccc--ccccccccccc
Q 034333 24 EDTA---LFILKHLYRDIPEDPNSPMESGGDNSKGESGSTGWSD--QREYAEEELPL 75 (97)
Q Consensus 24 ~DtA---LFILk~lY~~~~~~p~~~~e~~~~~~k~~~~~~~~~~--~r~~~~ee~pl 75 (97)
||++ --+|+.|+.-+++.+....+..-... ....+..|.+ +++....-+||
T Consensus 210 EdL~~dP~~~~~~I~~fLgl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 265 (265)
T d1texa_ 210 PYLWRNLTEVVGTVLEALGQDPRLAPKPVLERQ-ADQRSDEWVERYRRDAQRDGLPL 265 (265)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCTTCC---------------CCSTTTC-C-CCSCCCC
T ss_pred HHHHhCHHHHHHHHHHHhCcCcccccchhhhhh-cccchHHHHHHHHHHHHHcCCCC
Confidence 5555 35799999999997766433322221 2234556776 44444555554
No 4
>d1xoda1 b.55.1.4 (A:10-123) Sprouty-related, EVH1 domain-containing protein 1, Spred-1 {Western clawed frog (Xenopus tropicalis) [TaxId: 8364]}
Probab=24.69 E-value=24 Score=22.62 Aligned_cols=35 Identities=26% Similarity=0.419 Sum_probs=27.3
Q ss_pred CCcccccccccccccccccccchHHHHHHHHHHHHHHhh
Q 034333 57 SGSTGWSDQREYAEEELPLTFSDRAVVRSFSRRAKKFIK 95 (97)
Q Consensus 57 ~~~~~~~~~r~~~~ee~pltfsd~~~~~~fs~~~k~~~~ 95 (97)
..++.|-+.| --.-|+|++..-++.|.+++++-+.
T Consensus 75 ~~FH~w~~~~----~~~GL~F~se~eA~~F~~~v~~ale 109 (114)
T d1xoda1 75 PTFHHWRIGD----KKFGLTFQSPADARAFDRGIRRAIE 109 (114)
T ss_dssp TTEEEEEETT----EEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CceEEEEeCC----EEEEEecCCHHHHHHHHHHHHHHHH
Confidence 3466776654 3467999999999999999987664
No 5
>d1egxa_ b.55.1.4 (A:) Vasodilator-stimulated phosphoprotein (VASP) {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.55 E-value=34 Score=20.68 Aligned_cols=33 Identities=15% Similarity=0.319 Sum_probs=25.8
Q ss_pred cccccccccccccccccccchHHHHHHHHHHHHHHhh
Q 034333 59 STGWSDQREYAEEELPLTFSDRAVVRSFSRRAKKFIK 95 (97)
Q Consensus 59 ~~~~~~~r~~~~ee~pltfsd~~~~~~fs~~~k~~~~ 95 (97)
...|-+. ++-+-|.|.+...+++|.....+.++
T Consensus 79 f~~w~~~----~~~f~lrF~~~e~A~~F~~~~~~a~~ 111 (115)
T d1egxa_ 79 FHQWRDA----RQVWGLNFGSKEDAAQFAAGMASALE 111 (115)
T ss_dssp EEEEESS----SCEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred ceeeccc----ceEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 5567553 46789999999999999998776553
No 6
>d1nm3a1 c.47.1.1 (A:166-239) C-terminal, Grx domain of Hybrid-Prx5 {Haemophilus influenzae [TaxId: 727]}
Probab=20.60 E-value=17 Score=19.87 Aligned_cols=12 Identities=25% Similarity=0.628 Sum_probs=9.8
Q ss_pred HHHHHHHHHhhh
Q 034333 85 SFSRRAKKFIKK 96 (97)
Q Consensus 85 ~fs~~~k~~~~~ 96 (97)
.||.+||++|++
T Consensus 16 ~~C~~ak~lL~~ 27 (74)
T d1nm3a1 16 PFCAKAKQLLHD 27 (74)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 488999998875
No 7
>d1aym3_ b.121.4.1 (3:) Rhinovirus coat proteins {Human rhinovirus 16, (HRV-16) [TaxId: 31708]}
Probab=19.26 E-value=15 Score=25.90 Aligned_cols=21 Identities=14% Similarity=0.306 Sum_probs=17.8
Q ss_pred ccccchhHHHhhhhhhccccc
Q 034333 4 KTFEHPYLQAIGSHTNYWRDE 24 (97)
Q Consensus 4 ~~~En~YL~AltSHt~YW~s~ 24 (97)
+++.|.||..|+...+||+-.
T Consensus 92 ~~~~~T~L~~ls~~f~~WrGS 112 (238)
T d1aym3_ 92 HPLATTLIGEIASYFTHWTGS 112 (238)
T ss_dssp TTTTTSHHHHHHTTEEEEESC
T ss_pred ccccchHHHHHHhhhceEeee
Confidence 466788999999999999853
No 8
>d1q33a_ d.113.1.1 (A:) NUDT9 (mitochondrial ADP-ribose pyrophosphatase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.20 E-value=28 Score=24.47 Aligned_cols=36 Identities=17% Similarity=0.402 Sum_probs=27.4
Q ss_pred CCCCCCcccccccccccccccccccchHHHHHHHHHHHHH
Q 034333 53 SKGESGSTGWSDQREYAEEELPLTFSDRAVVRSFSRRAKK 92 (97)
Q Consensus 53 ~k~~~~~~~~~~~r~~~~ee~pltfsd~~~~~~fs~~~k~ 92 (97)
..++.....|++. ++.++|.|+-+.+++.+.++.+.
T Consensus 244 ~~dEa~~v~W~~v----de~~~L~~~H~~il~~aa~~~~A 279 (292)
T d1q33a_ 244 AGDDAGKVKWVDI----NDKLKLYASHSQFIKLVAEKRDA 279 (292)
T ss_dssp CCTTCSEEEEEEC----CTTCCCSTTHHHHHHHHHHHHTC
T ss_pred CCCchheEEEEEh----hccccchhhHHHHHHHHHHHHhc
Confidence 3567888999984 55678999988888887776554
No 9
>d1lrza2 d.108.1.4 (A:1-165) Methicillin resistance protein FemA {Staphylococcus aureus [TaxId: 1280]}
Probab=17.91 E-value=43 Score=21.43 Aligned_cols=22 Identities=23% Similarity=0.519 Sum_probs=19.5
Q ss_pred ccchHHHHHHHHHHHHHHhhhC
Q 034333 76 TFSDRAVVRSFSRRAKKFIKKR 97 (97)
Q Consensus 76 tfsd~~~~~~fs~~~k~~~~~~ 97 (97)
.|+|...++.|-+..++|.|++
T Consensus 79 d~~d~~ll~~~l~~L~~~akk~ 100 (165)
T d1lrza2 79 DYENQELVHFFFNELSKYVKKH 100 (165)
T ss_dssp CTTCHHHHHHHHHHHHHHHHTT
T ss_pred CccCHHHHHHHHHHHHHHHHHC
Confidence 4899999999999999999874
No 10
>d1chma1 c.55.2.1 (A:2-156) Creatinase {Pseudomonas putida [TaxId: 303]}
Probab=16.56 E-value=61 Score=19.25 Aligned_cols=26 Identities=15% Similarity=0.238 Sum_probs=17.4
Q ss_pred ccccccccchHHHHHHHHHHHHHHhhh
Q 034333 70 EEELPLTFSDRAVVRSFSRRAKKFIKK 96 (97)
Q Consensus 70 ~ee~pltfsd~~~~~~fs~~~k~~~~~ 96 (97)
-|..+++||...+-+.. .++++.|++
T Consensus 11 ~~k~~~~fs~~E~~~Rl-~klr~~m~~ 36 (155)
T d1chma1 11 GDKVRSTFSAQEYANRQ-ARLRAHLAA 36 (155)
T ss_dssp SCCCCCSSCHHHHHHHH-HHHHHHHHH
T ss_pred CccCCCCCCHHHHHHHH-HHHHHHHHH
Confidence 35788899988775443 456666665
Done!