Query 034345
Match_columns 97
No_of_seqs 109 out of 554
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 21:30:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034345.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034345hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3u5r_E Uncharacterized protein 99.7 7.7E-17 2.6E-21 115.4 9.4 84 8-95 122-209 (218)
2 2ywi_A Hypothetical conserved 99.6 1.4E-14 5E-19 99.8 9.5 84 8-95 109-196 (196)
3 2cvb_A Probable thiol-disulfid 99.5 1.6E-14 5.3E-19 99.5 8.0 83 8-95 95-181 (188)
4 1zye_A Thioredoxin-dependent p 99.0 1.2E-09 4E-14 78.4 7.5 75 8-95 119-201 (220)
5 2i81_A 2-Cys peroxiredoxin; st 98.9 1.1E-09 3.6E-14 78.4 5.2 77 8-95 115-196 (213)
6 1n8j_A AHPC, alkyl hydroperoxi 98.8 4.6E-09 1.6E-13 73.1 5.6 78 8-95 90-173 (186)
7 3eyt_A Uncharacterized protein 98.8 7E-09 2.4E-13 68.6 6.1 61 8-81 91-156 (158)
8 3lor_A Thiol-disulfide isomera 98.8 7.8E-09 2.7E-13 68.3 6.1 60 8-80 93-158 (160)
9 2pn8_A Peroxiredoxin-4; thiore 98.8 4.2E-09 1.4E-13 75.2 4.6 75 8-95 111-193 (211)
10 1uul_A Tryparedoxin peroxidase 98.8 4.4E-09 1.5E-13 73.6 4.6 75 8-95 99-181 (202)
11 2h01_A 2-Cys peroxiredoxin; th 98.8 7.1E-09 2.4E-13 71.8 5.1 77 8-95 94-175 (192)
12 2c0d_A Thioredoxin peroxidase 98.8 8.8E-09 3E-13 74.5 5.4 75 8-95 119-200 (221)
13 1qmv_A Human thioredoxin perox 98.8 8E-09 2.7E-13 71.9 4.8 77 8-95 97-179 (197)
14 2f9s_A Thiol-disulfide oxidore 98.7 1.6E-08 5.5E-13 66.5 5.4 64 8-84 82-145 (151)
15 2bmx_A Alkyl hydroperoxidase C 98.7 4.2E-08 1.4E-12 68.2 7.8 73 8-95 105-182 (195)
16 2b5x_A YKUV protein, TRXY; thi 98.7 3.5E-08 1.2E-12 63.7 6.9 59 8-79 89-147 (148)
17 3ztl_A Thioredoxin peroxidase; 98.7 3.5E-09 1.2E-13 75.9 1.8 74 8-95 132-214 (222)
18 1we0_A Alkyl hydroperoxide red 98.7 3.9E-08 1.3E-12 67.6 6.8 78 8-95 91-174 (187)
19 2l5o_A Putative thioredoxin; s 98.7 3.2E-08 1.1E-12 64.8 6.0 64 8-84 85-148 (153)
20 3qpm_A Peroxiredoxin; oxidored 98.7 3.1E-09 1.1E-13 77.7 1.1 77 8-95 140-222 (240)
21 4g2e_A Peroxiredoxin; redox pr 98.7 5.5E-08 1.9E-12 66.0 7.0 60 8-75 86-156 (157)
22 3ha9_A Uncharacterized thiored 98.7 2.6E-08 9E-13 66.5 4.9 54 10-78 112-165 (165)
23 2v2g_A Peroxiredoxin 6; oxidor 98.6 2.6E-08 8.7E-13 73.0 4.4 77 8-95 93-181 (233)
24 3tjj_A Peroxiredoxin-4; thiore 98.6 7.5E-09 2.6E-13 76.6 0.9 77 8-95 154-236 (254)
25 3gl3_A Putative thiol:disulfid 98.6 1.5E-07 5.2E-12 61.5 7.1 65 8-83 84-148 (152)
26 1zof_A Alkyl hydroperoxide-red 98.6 1E-07 3.5E-12 66.2 6.3 77 7-94 95-176 (198)
27 1xcc_A 1-Cys peroxiredoxin; un 98.6 5.2E-08 1.8E-12 70.3 4.8 78 7-95 93-182 (220)
28 3kcm_A Thioredoxin family prot 98.6 8.4E-08 2.9E-12 62.9 5.3 65 8-83 85-149 (154)
29 1lu4_A Soluble secreted antige 98.5 9.8E-08 3.4E-12 60.9 4.9 55 8-76 78-135 (136)
30 2lrn_A Thiol:disulfide interch 98.5 6.4E-07 2.2E-11 59.0 8.5 61 8-84 85-148 (152)
31 1zzo_A RV1677; thioredoxin fol 98.5 1.5E-07 5.1E-12 59.7 5.2 54 10-77 82-135 (136)
32 1prx_A HORF6; peroxiredoxin, h 98.5 7.4E-08 2.5E-12 69.7 4.1 78 7-95 96-185 (224)
33 4gqc_A Thiol peroxidase, perox 98.5 5E-07 1.7E-11 61.9 7.7 61 7-75 88-158 (164)
34 4evm_A Thioredoxin family prot 98.5 2.5E-07 8.5E-12 58.3 5.2 53 10-75 85-137 (138)
35 3raz_A Thioredoxin-related pro 98.5 2.6E-07 9E-12 60.9 5.3 63 8-83 79-146 (151)
36 3a2v_A Probable peroxiredoxin; 98.4 1.8E-07 6E-12 69.6 4.8 74 8-93 95-175 (249)
37 3drn_A Peroxiredoxin, bacterio 98.4 5.6E-07 1.9E-11 60.4 6.4 62 8-78 85-150 (161)
38 3ia1_A THIO-disulfide isomeras 98.4 1.4E-07 4.7E-12 62.0 3.1 62 8-82 85-149 (154)
39 3gkn_A Bacterioferritin comigr 98.4 7.9E-07 2.7E-11 59.2 6.4 59 8-76 91-161 (163)
40 3hdc_A Thioredoxin family prot 98.4 8.5E-07 2.9E-11 58.9 6.6 46 8-55 94-139 (158)
41 3keb_A Probable thiol peroxida 98.4 1.2E-06 4.1E-11 64.6 7.7 63 8-78 104-177 (224)
42 1kng_A Thiol:disulfide interch 98.4 5.6E-07 1.9E-11 58.8 5.1 56 8-76 95-151 (156)
43 2h30_A Thioredoxin, peptide me 98.4 4.1E-07 1.4E-11 60.1 4.4 57 9-78 100-157 (164)
44 3fkf_A Thiol-disulfide oxidore 98.4 9.8E-07 3.3E-11 56.9 6.1 56 7-78 89-147 (148)
45 3fw2_A Thiol-disulfide oxidore 98.3 1.1E-06 3.8E-11 57.7 6.4 54 8-77 92-148 (150)
46 1jfu_A Thiol:disulfide interch 98.3 8.8E-07 3E-11 60.2 5.8 60 10-80 120-183 (186)
47 3p7x_A Probable thiol peroxida 98.3 1.3E-06 4.5E-11 58.9 6.5 43 8-54 99-149 (166)
48 1xvw_A Hypothetical protein RV 98.3 1.4E-06 4.7E-11 57.7 6.3 60 8-76 92-159 (160)
49 3erw_A Sporulation thiol-disul 98.3 5.9E-07 2E-11 57.6 4.3 43 8-52 93-135 (145)
50 3kh7_A Thiol:disulfide interch 98.3 9.2E-07 3.1E-11 60.5 5.3 44 8-53 110-154 (176)
51 2lja_A Putative thiol-disulfid 98.3 9.9E-07 3.4E-11 57.5 5.1 58 11-81 90-147 (152)
52 2lrt_A Uncharacterized protein 98.3 3.1E-06 1E-10 56.3 7.6 57 7-79 88-147 (152)
53 3lwa_A Secreted thiol-disulfid 98.3 9.2E-07 3.1E-11 60.1 4.8 59 7-78 121-182 (183)
54 2jsy_A Probable thiol peroxida 98.3 2.6E-06 8.9E-11 57.0 7.0 60 10-77 101-167 (167)
55 1xzo_A BSSCO, hypothetical pro 98.2 2.5E-06 8.6E-11 56.9 5.8 60 9-79 96-174 (174)
56 3zrd_A Thiol peroxidase; oxido 98.2 3.2E-06 1.1E-10 59.7 6.4 57 8-75 132-199 (200)
57 3ewl_A Uncharacterized conserv 98.2 2.1E-06 7.2E-11 55.5 5.0 53 8-76 86-140 (142)
58 3ixr_A Bacterioferritin comigr 98.2 4.4E-06 1.5E-10 57.4 6.8 59 8-76 107-177 (179)
59 3or5_A Thiol:disulfide interch 98.2 3.6E-06 1.2E-10 55.4 5.5 58 8-79 90-153 (165)
60 2hyx_A Protein DIPZ; thioredox 98.1 2.3E-06 7.8E-11 66.3 5.2 59 8-79 143-201 (352)
61 2b1k_A Thiol:disulfide interch 98.1 2.3E-06 7.9E-11 57.0 4.5 43 8-52 103-146 (168)
62 1xvq_A Thiol peroxidase; thior 98.1 5.2E-06 1.8E-10 56.7 6.3 54 10-77 100-165 (175)
63 1psq_A Probable thiol peroxida 98.1 9.1E-06 3.1E-10 54.6 7.2 40 8-51 96-143 (163)
64 2yzh_A Probable thiol peroxida 98.1 6.4E-06 2.2E-10 55.6 6.3 60 8-76 101-171 (171)
65 2a4v_A Peroxiredoxin DOT5; yea 98.1 1.7E-06 5.8E-11 57.8 2.9 38 8-50 90-133 (159)
66 1q98_A Thiol peroxidase, TPX; 98.1 6.6E-06 2.3E-10 55.5 5.5 40 8-51 97-147 (165)
67 3mng_A Peroxiredoxin-5, mitoch 98.0 1.6E-05 5.5E-10 55.4 7.5 39 11-54 106-157 (173)
68 4eo3_A Bacterioferritin comigr 98.0 4.1E-06 1.4E-10 63.8 4.5 61 7-77 75-139 (322)
69 1tp9_A Peroxiredoxin, PRX D (t 98.0 7.5E-06 2.6E-10 55.3 5.0 36 10-50 97-143 (162)
70 2ggt_A SCO1 protein homolog, m 98.0 3.8E-06 1.3E-10 55.4 3.2 57 8-77 87-161 (164)
71 3hcz_A Possible thiol-disulfid 98.0 6.6E-06 2.3E-10 52.9 4.2 35 11-49 91-127 (148)
72 2wfc_A Peroxiredoxin 5, PRDX5; 98.0 2E-05 6.9E-10 54.1 6.7 38 8-50 89-139 (167)
73 2v1m_A Glutathione peroxidase; 97.9 7.1E-06 2.4E-10 54.3 3.1 59 8-79 95-169 (169)
74 2rli_A SCO2 protein homolog, m 97.9 1.7E-05 6E-10 52.6 4.9 58 8-78 90-165 (171)
75 2ls5_A Uncharacterized protein 97.1 1.8E-06 6.2E-11 57.1 0.0 58 8-79 91-150 (159)
76 2k6v_A Putative cytochrome C o 97.8 1E-05 3.5E-10 53.6 3.0 57 8-76 98-172 (172)
77 3tue_A Tryparedoxin peroxidase 97.7 5.1E-05 1.7E-09 55.7 5.8 77 8-95 119-201 (219)
78 3eur_A Uncharacterized protein 97.7 2.6E-05 8.9E-10 50.6 3.5 40 8-51 90-131 (142)
79 3dwv_A Glutathione peroxidase- 97.7 8.5E-06 2.9E-10 56.1 1.2 61 8-81 110-187 (187)
80 3sbc_A Peroxiredoxin TSA1; alp 97.7 0.00011 3.7E-09 53.9 7.0 60 8-76 115-180 (216)
81 3uma_A Hypothetical peroxiredo 97.7 7.5E-05 2.6E-09 52.4 5.9 41 8-53 114-167 (184)
82 4fo5_A Thioredoxin-like protei 97.6 6.8E-05 2.3E-09 48.6 4.3 39 8-50 88-130 (143)
83 2l5l_A Thioredoxin; structural 97.6 0.00014 4.9E-09 47.2 5.6 55 15-83 78-132 (136)
84 2l57_A Uncharacterized protein 97.6 0.00012 4E-09 46.7 5.1 55 15-82 68-122 (126)
85 2p5q_A Glutathione peroxidase 97.6 3.3E-05 1.1E-09 51.0 2.5 58 8-78 96-169 (170)
86 2pwj_A Mitochondrial peroxired 97.5 0.00015 5E-09 49.8 5.6 38 9-51 104-152 (171)
87 3hxs_A Thioredoxin, TRXP; elec 97.5 0.0001 3.5E-09 47.7 4.1 53 12-78 88-140 (141)
88 3cmi_A Peroxiredoxin HYR1; thi 97.5 4.9E-05 1.7E-09 51.1 2.6 58 8-78 95-169 (171)
89 2vup_A Glutathione peroxidase- 97.5 3.8E-05 1.3E-09 52.8 2.0 59 8-79 112-187 (190)
90 2kuc_A Putative disulphide-iso 97.4 0.00028 9.6E-09 44.8 5.4 52 17-81 74-125 (130)
91 1nm3_A Protein HI0572; hybrid, 97.4 0.00061 2.1E-08 48.4 7.7 40 8-52 91-142 (241)
92 2gs3_A PHGPX, GPX-4, phospholi 97.3 5.5E-05 1.9E-09 51.8 1.4 56 8-76 112-185 (185)
93 2ju5_A Thioredoxin disulfide i 97.3 0.00051 1.8E-08 45.8 6.2 51 16-78 103-153 (154)
94 2obi_A PHGPX, GPX-4, phospholi 97.3 4.4E-05 1.5E-09 51.9 0.6 42 8-51 110-169 (183)
95 2f8a_A Glutathione peroxidase 97.3 0.00013 4.6E-09 51.6 2.8 38 27-77 170-207 (208)
96 2p31_A CL683, glutathione pero 97.3 2.5E-05 8.6E-10 53.3 -1.0 57 7-76 112-180 (181)
97 3me7_A Putative uncharacterize 97.2 0.00038 1.3E-08 47.2 4.6 54 17-82 105-167 (170)
98 3fk8_A Disulphide isomerase; A 97.2 0.00087 3E-08 42.9 5.6 52 16-76 75-132 (133)
99 2lus_A Thioredoxion; CR-Trp16, 96.2 7.5E-05 2.6E-09 47.8 0.0 40 11-54 90-129 (143)
100 1thx_A Thioredoxin, thioredoxi 97.1 0.00059 2E-08 41.9 4.2 50 15-78 65-114 (115)
101 1i5g_A Tryparedoxin II; electr 97.1 0.00016 5.4E-09 46.8 1.5 38 10-51 88-127 (144)
102 2trx_A Thioredoxin; electron t 97.1 0.00065 2.2E-08 41.5 4.2 49 15-77 60-108 (108)
103 2b7k_A SCO1 protein; metalloch 97.0 0.00096 3.3E-08 46.3 5.2 42 9-52 105-165 (200)
104 1o8x_A Tryparedoxin, TRYX, TXN 97.0 0.00018 6.3E-09 46.7 1.4 38 10-51 88-127 (146)
105 1dby_A Chloroplast thioredoxin 97.0 0.001 3.5E-08 40.5 4.4 48 15-76 59-106 (107)
106 2e0q_A Thioredoxin; electron t 96.9 0.001 3.6E-08 39.8 4.2 49 15-77 55-103 (104)
107 1v98_A Thioredoxin; oxidoreduc 96.9 0.0012 4.1E-08 42.8 4.5 51 15-79 90-140 (140)
108 1o73_A Tryparedoxin; electron 96.9 0.00035 1.2E-08 44.9 1.5 32 16-51 95-127 (144)
109 2fwh_A Thiol:disulfide interch 96.8 0.00038 1.3E-08 45.2 1.5 35 16-53 78-115 (134)
110 3tco_A Thioredoxin (TRXA-1); d 96.8 0.0012 4E-08 40.1 3.6 49 14-76 60-108 (109)
111 1nsw_A Thioredoxin, TRX; therm 96.8 0.00056 1.9E-08 41.7 2.0 48 15-76 57-104 (105)
112 3d22_A TRXH4, thioredoxin H-ty 96.8 0.0016 5.3E-08 41.9 4.2 53 15-82 85-137 (139)
113 1t00_A Thioredoxin, TRX; redox 96.8 0.0014 4.8E-08 40.3 3.8 49 15-77 63-111 (112)
114 1x5d_A Protein disulfide-isome 96.7 0.0015 5.2E-08 41.3 3.8 50 16-79 70-119 (133)
115 3s9f_A Tryparedoxin; thioredox 96.7 0.00049 1.7E-08 46.3 1.5 29 19-51 118-147 (165)
116 2i4a_A Thioredoxin; acidophIle 96.7 0.0013 4.4E-08 39.9 3.2 47 15-75 60-106 (107)
117 1w4v_A Thioredoxin, mitochondr 96.7 0.0022 7.4E-08 40.5 4.3 48 15-76 71-118 (119)
118 2es7_A Q8ZP25_salty, putative 96.6 0.001 3.5E-08 44.7 2.7 54 13-80 75-128 (142)
119 4f82_A Thioredoxin reductase; 96.6 0.0024 8.3E-08 45.2 4.6 39 8-51 105-156 (176)
120 1xiy_A Peroxiredoxin, pfaop; a 96.6 0.0084 2.9E-07 42.2 7.4 63 10-77 105-179 (182)
121 2lst_A Thioredoxin; structural 95.6 0.00033 1.1E-08 44.6 0.0 56 16-84 65-123 (130)
122 2r37_A Glutathione peroxidase 96.6 0.0012 4.1E-08 46.9 2.9 36 30-78 159-194 (207)
123 2dj1_A Protein disulfide-isome 96.6 0.0032 1.1E-07 40.3 4.7 51 16-81 78-128 (140)
124 1ep7_A Thioredoxin CH1, H-type 96.6 0.0031 1.1E-07 38.7 4.4 48 15-77 64-111 (112)
125 2o8v_B Thioredoxin 1; disulfid 96.6 0.0014 4.7E-08 42.4 2.9 49 15-77 80-128 (128)
126 2i3y_A Epididymal secretory gl 96.6 0.0013 4.4E-08 47.2 3.0 36 30-78 177-212 (215)
127 2dml_A Protein disulfide-isome 96.6 0.0019 6.4E-08 40.9 3.5 51 15-78 75-125 (130)
128 1ti3_A Thioredoxin H, PTTRXH1; 96.5 0.0045 1.6E-07 37.8 5.0 48 15-77 65-112 (113)
129 1nho_A Probable thioredoxin; b 96.5 0.0021 7.3E-08 37.5 3.3 44 15-76 41-84 (85)
130 2yzu_A Thioredoxin; redox prot 96.5 0.0017 5.6E-08 39.3 2.7 49 15-77 58-106 (109)
131 1fb6_A Thioredoxin M; electron 96.4 0.0038 1.3E-07 37.6 4.0 48 15-76 58-105 (105)
132 2vlu_A Thioredoxin, thioredoxi 96.4 0.0046 1.6E-07 38.6 4.3 49 15-78 73-121 (122)
133 3p2a_A Thioredoxin 2, putative 96.4 0.0037 1.3E-07 40.7 4.0 54 13-80 93-146 (148)
134 3die_A Thioredoxin, TRX; elect 96.3 0.0025 8.7E-08 38.5 2.9 49 13-75 57-105 (106)
135 2pu9_C TRX-F, thioredoxin F-ty 96.3 0.007 2.4E-07 37.2 5.0 45 17-76 66-110 (111)
136 3qfa_C Thioredoxin; protein-pr 96.3 0.0051 1.7E-07 38.8 4.2 49 13-76 68-116 (116)
137 2ppt_A Thioredoxin-2; thiredox 96.3 0.0049 1.7E-07 41.3 4.2 51 15-79 104-154 (155)
138 2voc_A Thioredoxin; electron t 96.2 0.0036 1.2E-07 38.9 3.3 49 15-77 57-105 (112)
139 1oaz_A Thioredoxin 1; immune s 96.2 0.0018 6E-08 41.7 1.9 50 13-76 73-122 (123)
140 1fo5_A Thioredoxin; disulfide 96.2 0.0023 7.9E-08 37.4 2.0 44 15-76 42-85 (85)
141 3gnj_A Thioredoxin domain prot 96.2 0.0061 2.1E-07 37.1 4.0 51 13-77 60-110 (111)
142 3hz4_A Thioredoxin; NYSGXRC, P 96.1 0.00083 2.9E-08 43.8 -0.1 50 15-78 64-113 (140)
143 3emx_A Thioredoxin; structural 96.1 0.0086 2.9E-07 38.7 4.8 50 16-79 79-128 (135)
144 2l6c_A Thioredoxin; oxidoreduc 96.1 0.0044 1.5E-07 38.6 3.2 49 15-77 58-106 (110)
145 2j23_A Thioredoxin; immune pro 96.1 0.0059 2E-07 38.6 3.8 48 15-77 74-121 (121)
146 3m9j_A Thioredoxin; oxidoreduc 96.0 0.0059 2E-07 36.8 3.5 47 15-76 59-105 (105)
147 2yj7_A LPBCA thioredoxin; oxid 95.0 0.0011 3.6E-08 39.9 0.0 36 15-53 59-94 (106)
148 1xfl_A Thioredoxin H1; AT3G510 96.0 0.0064 2.2E-07 38.9 3.6 48 15-77 77-124 (124)
149 3cxg_A Putative thioredoxin; m 96.0 0.0048 1.6E-07 40.1 3.0 52 15-78 78-130 (133)
150 3f3q_A Thioredoxin-1; His TAG, 96.0 0.0086 2.9E-07 37.2 4.0 49 13-76 61-109 (109)
151 2vim_A Thioredoxin, TRX; thior 95.9 0.0082 2.8E-07 36.0 3.8 47 15-76 58-104 (104)
152 2i1u_A Thioredoxin, TRX, MPT46 95.9 0.0027 9.3E-08 39.4 1.6 50 15-78 70-119 (121)
153 3f9u_A Putative exported cytoc 95.9 0.0026 8.9E-08 42.5 1.4 30 22-53 123-152 (172)
154 2wz9_A Glutaredoxin-3; protein 95.9 0.014 4.8E-07 38.5 5.0 52 15-81 71-122 (153)
155 2vm1_A Thioredoxin, thioredoxi 95.8 0.012 4.1E-07 36.1 4.1 49 15-78 67-115 (118)
156 3kij_A Probable glutathione pe 95.8 0.0032 1.1E-07 42.5 1.5 40 29-77 131-174 (180)
157 1xwb_A Thioredoxin; dimerizati 95.8 0.0082 2.8E-07 36.1 3.2 47 15-76 60-106 (106)
158 4euy_A Uncharacterized protein 95.7 0.0055 1.9E-07 37.6 2.4 50 13-76 55-104 (105)
159 1x5e_A Thioredoxin domain cont 95.7 0.0049 1.7E-07 38.9 2.2 48 15-77 63-110 (126)
160 1r26_A Thioredoxin; redox-acti 95.7 0.012 4E-07 37.9 4.0 48 15-77 76-123 (125)
161 2xc2_A Thioredoxinn; oxidoredu 95.7 0.01 3.4E-07 36.9 3.6 46 16-76 72-117 (117)
162 3aps_A DNAJ homolog subfamily 95.7 0.0059 2E-07 38.1 2.4 54 15-78 61-114 (122)
163 2xhf_A Peroxiredoxin 5; oxidor 95.6 0.02 6.7E-07 40.0 5.0 37 10-51 103-150 (171)
164 3apq_A DNAJ homolog subfamily 95.5 0.016 5.5E-07 40.1 4.3 54 15-82 154-207 (210)
165 1syr_A Thioredoxin; SGPP, stru 95.3 0.013 4.4E-07 36.2 3.0 47 15-76 65-111 (112)
166 3d6i_A Monothiol glutaredoxin- 95.3 0.018 6E-07 35.3 3.6 48 15-77 62-109 (112)
167 1gh2_A Thioredoxin-like protei 95.3 0.022 7.7E-07 34.6 4.1 47 15-76 60-106 (107)
168 1mek_A Protein disulfide isome 95.3 0.0071 2.4E-07 37.0 1.7 47 17-77 69-117 (120)
169 1faa_A Thioredoxin F; electron 95.2 0.022 7.5E-07 35.6 3.9 45 17-76 79-123 (124)
170 1wmj_A Thioredoxin H-type; str 95.2 0.0093 3.2E-07 37.4 2.1 50 16-80 76-125 (130)
171 3dxb_A Thioredoxin N-terminall 95.2 0.017 6E-07 40.4 3.7 56 14-83 69-124 (222)
172 3idv_A Protein disulfide-isome 95.2 0.031 1E-06 38.5 4.9 50 15-79 75-124 (241)
173 4hde_A SCO1/SENC family lipopr 94.8 0.073 2.5E-06 35.9 5.9 39 28-77 132-170 (170)
174 3uvt_A Thioredoxin domain-cont 94.7 0.033 1.1E-06 33.6 3.6 35 15-52 64-98 (111)
175 3q6o_A Sulfhydryl oxidase 1; p 94.6 0.057 1.9E-06 38.0 5.2 43 7-52 183-225 (244)
176 1a8l_A Protein disulfide oxido 94.6 0.039 1.3E-06 37.9 4.1 48 15-76 178-225 (226)
177 2dj3_A Protein disulfide-isome 94.5 0.042 1.5E-06 34.5 3.9 52 16-79 68-120 (133)
178 3ul3_B Thioredoxin, thioredoxi 94.4 0.033 1.1E-06 35.3 3.2 36 13-51 80-115 (128)
179 2qgv_A Hydrogenase-1 operon pr 94.3 0.041 1.4E-06 37.7 3.6 51 15-79 77-127 (140)
180 3gix_A Thioredoxin-like protei 94.2 0.077 2.6E-06 35.1 4.9 60 15-78 63-122 (149)
181 3h79_A Thioredoxin-like protei 94.1 0.044 1.5E-06 34.5 3.4 37 15-52 78-114 (127)
182 2djk_A PDI, protein disulfide- 93.9 0.024 8.2E-07 36.7 1.8 53 16-80 63-118 (133)
183 2oe3_A Thioredoxin-3; electron 93.8 0.039 1.3E-06 34.6 2.7 34 15-51 69-102 (114)
184 1v58_A Thiol:disulfide interch 93.7 0.021 7.3E-07 41.0 1.4 49 15-77 185-233 (241)
185 3gv1_A Disulfide interchange p 93.7 0.042 1.4E-06 37.2 2.8 45 15-77 95-139 (147)
186 2qsi_A Putative hydrogenase ex 93.6 0.086 2.9E-06 35.9 4.2 51 13-77 73-123 (137)
187 1ilo_A Conserved hypothetical 93.5 0.11 3.8E-06 29.5 4.1 28 18-52 39-66 (77)
188 2ywm_A Glutaredoxin-like prote 93.3 0.2 6.8E-06 34.5 5.8 35 16-53 68-102 (229)
189 1qgv_A Spliceosomal protein U5 93.3 0.081 2.8E-06 34.7 3.6 60 15-78 63-122 (142)
190 3iv4_A Putative oxidoreductase 93.1 0.098 3.3E-06 34.6 3.8 24 21-49 72-96 (112)
191 3qou_A Protein YBBN; thioredox 93.1 0.072 2.5E-06 38.0 3.3 36 15-53 66-101 (287)
192 3f4s_A Alpha-DSBA1, putative u 93.0 0.055 1.9E-06 38.8 2.7 57 18-82 159-216 (226)
193 2f51_A Thioredoxin; electron t 92.9 0.061 2.1E-06 33.8 2.5 47 15-75 62-111 (118)
194 3zzx_A Thioredoxin; oxidoreduc 92.8 0.1 3.4E-06 32.8 3.4 34 15-51 59-92 (105)
195 1sen_A Thioredoxin-like protei 92.7 0.14 4.6E-06 34.3 4.1 63 13-78 84-149 (164)
196 3gha_A Disulfide bond formatio 92.6 0.069 2.4E-06 37.4 2.6 44 17-79 151-194 (202)
197 3gyk_A 27KDA outer membrane pr 92.6 0.071 2.4E-06 35.4 2.5 44 15-77 130-173 (175)
198 1ttz_A Conserved hypothetical 92.5 0.047 1.6E-06 33.8 1.5 47 13-78 32-78 (87)
199 2hls_A Protein disulfide oxido 92.4 0.16 5.6E-06 36.2 4.5 44 17-78 184-227 (243)
200 3feu_A Putative lipoprotein; a 92.0 0.12 4.1E-06 35.5 3.2 46 16-77 139-184 (185)
201 3idv_A Protein disulfide-isome 92.0 0.12 4.2E-06 35.4 3.3 47 15-76 190-236 (241)
202 2znm_A Thiol:disulfide interch 91.7 0.071 2.4E-06 36.0 1.8 45 15-77 136-180 (195)
203 2k8s_A Thioredoxin; dimer, str 91.4 0.15 5.3E-06 29.8 2.9 30 17-53 43-72 (80)
204 1zma_A Bacterocin transport ac 91.2 0.12 4.3E-06 31.9 2.4 30 19-51 77-106 (118)
205 2dlx_A UBX domain-containing p 91.1 0.21 7.1E-06 34.0 3.7 24 18-41 90-114 (153)
206 3h93_A Thiol:disulfide interch 91.1 0.1 3.4E-06 35.3 2.0 46 16-77 139-184 (192)
207 2dj0_A Thioredoxin-related tra 91.0 0.28 9.6E-06 31.2 4.0 37 16-55 68-110 (137)
208 4dvc_A Thiol:disulfide interch 90.9 0.19 6.5E-06 33.1 3.2 46 17-78 138-183 (184)
209 2in3_A Hypothetical protein; D 90.8 0.15 5E-06 35.0 2.7 51 16-80 163-213 (216)
210 2ywm_A Glutaredoxin-like prote 90.7 0.15 5.1E-06 35.1 2.6 46 15-77 175-220 (229)
211 3t58_A Sulfhydryl oxidase 1; o 90.3 0.41 1.4E-05 38.5 5.3 52 16-80 76-130 (519)
212 2av4_A Thioredoxin-like protei 90.0 0.31 1E-05 34.2 3.8 61 13-78 79-140 (160)
213 2rem_A Disulfide oxidoreductas 90.0 0.16 5.4E-06 34.1 2.2 45 15-78 141-185 (193)
214 3ph9_A Anterior gradient prote 89.9 0.36 1.2E-05 32.7 3.9 42 12-55 82-124 (151)
215 3dml_A Putative uncharacterize 89.7 0.1 3.4E-06 34.5 1.0 46 19-78 66-111 (116)
216 1a8l_A Protein disulfide oxido 89.4 0.87 3E-05 30.9 5.7 34 18-53 67-100 (226)
217 3bci_A Disulfide bond protein 89.2 0.2 6.8E-06 33.7 2.2 44 17-79 137-180 (186)
218 3ira_A Conserved protein; meth 88.9 0.46 1.6E-05 33.0 4.0 35 13-51 80-122 (173)
219 3q6o_A Sulfhydryl oxidase 1; p 88.6 0.44 1.5E-05 33.3 3.8 52 16-80 76-130 (244)
220 1eej_A Thiol:disulfide interch 88.4 0.13 4.3E-06 36.1 0.8 46 13-76 165-210 (216)
221 3kp8_A Vkorc1/thioredoxin doma 88.3 0.49 1.7E-05 29.7 3.5 28 17-52 54-81 (106)
222 3t58_A Sulfhydryl oxidase 1; o 87.1 0.71 2.4E-05 37.1 4.5 35 7-41 183-217 (519)
223 1t3b_A Thiol:disulfide interch 86.8 0.14 4.8E-06 35.9 0.2 42 15-74 167-208 (211)
224 1sji_A Calsequestrin 2, calseq 86.7 0.5 1.7E-05 35.0 3.3 35 15-53 75-109 (350)
225 3kzq_A Putative uncharacterize 85.4 0.91 3.1E-05 31.1 3.9 49 17-79 157-205 (208)
226 3c7m_A Thiol:disulfide interch 85.3 0.3 1E-05 32.6 1.3 46 16-77 149-194 (195)
227 3gmf_A Protein-disulfide isome 84.9 0.77 2.6E-05 32.2 3.4 42 18-78 156-198 (205)
228 2hls_A Protein disulfide oxido 84.4 2.2 7.4E-05 30.3 5.6 56 9-81 65-123 (243)
229 3hz8_A Thiol:disulfide interch 84.2 0.9 3.1E-05 31.1 3.4 42 17-77 142-183 (193)
230 2djj_A PDI, protein disulfide- 83.6 0.5 1.7E-05 28.9 1.7 43 20-77 74-117 (121)
231 1wjk_A C330018D20RIK protein; 83.3 0.59 2E-05 28.9 2.0 41 17-76 55-95 (100)
232 1z6m_A Conserved hypothetical 81.3 0.45 1.5E-05 31.5 0.9 20 16-35 136-155 (175)
233 3gl5_A Putative DSBA oxidoredu 80.9 2.2 7.4E-05 30.4 4.5 46 18-81 172-217 (239)
234 1z6n_A Hypothetical protein PA 80.8 0.78 2.7E-05 31.3 2.0 34 15-51 93-129 (167)
235 3hd5_A Thiol:disulfide interch 80.5 1 3.5E-05 30.3 2.5 46 16-77 138-184 (195)
236 3us3_A Calsequestrin-1; calciu 80.3 1.6 5.5E-05 32.7 3.8 33 16-52 78-110 (367)
237 3uem_A Protein disulfide-isome 79.5 2.7 9.1E-05 30.8 4.7 54 18-82 180-235 (361)
238 1wou_A Thioredoxin -related pr 79.0 1.5 5.3E-05 27.3 2.8 25 16-40 79-103 (123)
239 3qcp_A QSOX from trypanosoma b 78.8 0.97 3.3E-05 36.3 2.2 62 15-77 90-152 (470)
240 3f8u_A Protein disulfide-isome 78.3 1.8 6.3E-05 33.0 3.6 55 15-81 410-465 (481)
241 3ed3_A Protein disulfide-isome 77.5 1.9 6.5E-05 31.6 3.3 24 17-40 79-102 (298)
242 2fgx_A Putative thioredoxin; N 77.4 1.9 6.5E-05 27.7 2.9 35 15-55 66-100 (107)
243 2b5e_A Protein disulfide-isome 77.4 2 6.7E-05 33.2 3.5 34 16-52 73-108 (504)
244 2r2j_A Thioredoxin domain-cont 76.3 2 6.8E-05 32.2 3.2 47 16-77 69-117 (382)
245 3apo_A DNAJ homolog subfamily 73.8 3.2 0.00011 33.9 4.0 47 16-77 496-542 (780)
246 3f8u_A Protein disulfide-isome 73.0 2.4 8.3E-05 32.3 3.0 35 15-52 61-95 (481)
247 2imf_A HCCA isomerase, 2-hydro 72.1 4.1 0.00014 27.6 3.7 42 18-78 156-197 (203)
248 4gs5_A Acyl-COA synthetase (AM 70.1 1.3 4.6E-05 32.9 0.9 49 28-81 230-278 (358)
249 3l8c_A D-alanine--poly(phospho 69.9 4.1 0.00014 31.2 3.6 43 28-74 382-424 (521)
250 3ite_A SIDN siderophore synthe 69.8 2.3 7.9E-05 33.0 2.3 43 28-74 406-448 (562)
251 2d1s_A Luciferase, luciferin 4 69.0 4.9 0.00017 31.3 4.0 51 20-74 409-462 (548)
252 3l9v_A Putative thiol-disulfid 68.5 8.5 0.00029 25.9 4.7 53 16-79 132-185 (189)
253 3g7s_A Long-chain-fatty-acid-- 68.1 3.7 0.00013 31.9 3.1 42 28-73 418-459 (549)
254 3ipl_A 2-succinylbenzoate--COA 67.5 4.3 0.00015 30.9 3.3 42 28-73 377-418 (501)
255 3o83_A Peptide arylation enzym 66.9 2.8 9.7E-05 32.5 2.2 50 20-73 407-459 (544)
256 3apo_A DNAJ homolog subfamily 66.3 2.5 8.4E-05 34.5 1.8 55 15-79 715-769 (780)
257 2dbc_A PDCL2, unnamed protein 66.3 21 0.00073 22.3 6.2 53 15-75 67-119 (135)
258 2v7b_A Benzoate-coenzyme A lig 65.9 5.8 0.0002 30.4 3.8 50 20-73 398-449 (529)
259 1mdb_A 2,3-dihydroxybenzoate-A 65.7 4 0.00014 31.7 2.9 50 20-73 398-450 (539)
260 1ry2_A Acetyl-coenzyme A synth 65.3 7.3 0.00025 31.4 4.4 44 27-74 504-547 (663)
261 4fuq_A Malonyl COA synthetase; 64.0 2.8 9.7E-05 32.2 1.7 51 20-74 367-420 (503)
262 4gr5_A Non-ribosomal peptide s 63.9 3.3 0.00011 32.4 2.1 42 28-73 448-489 (570)
263 3ga4_A Dolichyl-diphosphooligo 63.7 4.9 0.00017 28.0 2.7 28 13-40 87-114 (178)
264 3ni2_A 4-coumarate:COA ligase; 63.3 3.6 0.00012 31.8 2.2 51 20-74 402-455 (536)
265 1t5h_X 4-chlorobenzoyl COA lig 63.0 3.3 0.00011 31.7 1.9 49 20-72 371-421 (504)
266 3rix_A Luciferase, luciferin 4 62.6 3.2 0.00011 32.2 1.8 51 20-74 407-460 (550)
267 3c5e_A Acyl-coenzyme A synthet 62.3 3.2 0.00011 32.7 1.7 51 20-74 425-477 (570)
268 1pg4_A Acetyl-COA synthetase; 61.7 3.8 0.00013 32.9 2.1 44 27-74 495-538 (652)
269 3rg2_A Enterobactin synthase c 60.8 3.5 0.00012 32.6 1.8 51 19-73 401-454 (617)
270 3uem_A Protein disulfide-isome 60.2 4.2 0.00014 29.7 1.9 38 13-51 305-342 (361)
271 4dg8_A PA1221; ANL superfamily 59.6 3.4 0.00012 33.1 1.5 43 28-74 398-440 (620)
272 3etc_A AMP-binding protein; ad 58.9 5 0.00017 31.7 2.3 50 20-73 444-495 (580)
273 3r44_A Fatty acyl COA syntheta 58.1 4.3 0.00015 31.3 1.8 49 20-72 382-432 (517)
274 2qc7_A ERP31, ERP28, endoplasm 56.3 11 0.00037 27.1 3.6 34 18-53 70-106 (240)
275 1r4w_A Glutathione S-transfera 56.1 7.2 0.00025 26.9 2.5 46 18-78 171-216 (226)
276 3ihg_A RDME; flavoenzyme, anth 54.9 20 0.00068 27.7 5.1 52 14-77 483-534 (535)
277 2trc_P Phosducin, MEKA, PP33; 53.2 4.7 0.00016 28.3 1.2 33 18-53 161-193 (217)
278 1amu_A GRSA, gramicidin synthe 52.8 4.9 0.00017 31.5 1.3 41 28-72 409-449 (563)
279 3tsy_A Fusion protein 4-coumar 52.4 7.7 0.00026 32.5 2.5 50 20-73 449-501 (979)
280 1a0r_P Phosducin, MEKA, PP33; 51.3 6.7 0.00023 28.4 1.8 32 19-53 175-206 (245)
281 2e7p_A Glutaredoxin; thioredox 50.8 6.3 0.00022 23.7 1.4 17 19-35 63-79 (116)
282 2c0g_A ERP29 homolog, windbeut 50.7 12 0.0004 27.2 3.0 45 18-76 82-131 (248)
283 1v25_A Long-chain-fatty-acid-C 50.6 3.5 0.00012 32.0 0.1 43 28-74 414-456 (541)
284 3kp9_A Vkorc1/thioredoxin doma 50.2 12 0.00042 27.9 3.1 27 18-52 240-266 (291)
285 3ivr_A Putative long-chain-fat 49.7 8.7 0.0003 29.3 2.3 50 20-73 367-420 (509)
286 3gn3_A Putative protein-disulf 49.4 9.9 0.00034 25.9 2.3 17 19-35 144-160 (182)
287 1hyu_A AHPF, alkyl hydroperoxi 47.9 16 0.00056 28.5 3.6 30 16-52 157-186 (521)
288 1ego_A Glutaredoxin; electron 46.6 13 0.00044 20.9 2.3 16 20-35 47-64 (85)
289 3nyq_A Malonyl-COA ligase; A/B 46.6 11 0.00036 29.0 2.3 50 20-73 373-426 (505)
290 2vsq_A Surfactin synthetase su 43.1 9.4 0.00032 33.2 1.7 42 29-74 841-882 (1304)
291 3l9s_A Thiol:disulfide interch 42.2 14 0.0005 25.0 2.3 20 16-35 138-157 (191)
292 3evi_A Phosducin-like protein 40.9 65 0.0022 20.1 5.7 51 14-72 59-109 (118)
293 3fce_A D-alanine--poly(phospho 40.6 13 0.00045 28.3 2.0 42 28-74 379-420 (512)
294 3rpp_A Glutathione S-transfera 38.9 30 0.001 24.2 3.6 47 17-78 170-216 (234)
295 4h86_A Peroxiredoxin type-2; o 38.8 52 0.0018 23.5 4.8 38 10-52 134-180 (199)
296 3fz5_A Possible 2-hydroxychrom 38.3 29 0.001 23.4 3.3 27 17-51 161-187 (202)
297 3gqw_A Fatty acid AMP ligase; 37.8 18 0.00061 27.7 2.4 43 27-74 440-482 (576)
298 1pn0_A Phenol 2-monooxygenase; 37.5 49 0.0017 26.8 5.0 46 18-77 600-646 (665)
299 3kxw_A Saframycin MX1 syntheta 36.2 8.8 0.0003 29.7 0.4 40 28-72 438-477 (590)
300 3e7w_A D-alanine--poly(phospho 36.0 20 0.00069 27.3 2.4 42 28-74 378-419 (511)
301 1sji_A Calsequestrin 2, calseq 31.8 59 0.002 23.6 4.3 32 17-51 178-209 (350)
302 1r7h_A NRDH-redoxin; thioredox 31.1 31 0.0011 18.6 2.1 20 16-35 34-56 (75)
303 2h8l_A Protein disulfide-isome 30.6 80 0.0027 21.8 4.7 59 9-80 169-233 (252)
304 1t0f_A Transposon TN7 transpos 29.7 20 0.00069 26.3 1.4 32 11-42 86-127 (276)
305 2l4c_A Endoplasmic reticulum r 29.1 93 0.0032 19.7 4.5 38 9-51 68-105 (124)
306 2b5e_A Protein disulfide-isome 27.8 27 0.00092 26.7 1.9 35 15-51 417-452 (504)
307 3ic4_A Glutaredoxin (GRX-1); s 26.7 79 0.0027 17.9 3.5 17 19-35 57-73 (92)
308 1un2_A DSBA, thiol-disulfide i 23.6 26 0.00089 24.0 1.0 20 16-35 37-56 (197)
309 4b2g_A GH3-1 auxin conjugating 23.1 94 0.0032 25.6 4.4 32 45-76 429-460 (609)
310 3bj5_A Protein disulfide-isome 21.6 1.7E+02 0.0058 18.8 5.8 50 20-80 79-130 (147)
311 2y4o_A Phenylacetate-coenzyme 20.8 18 0.00062 26.9 -0.3 45 29-73 309-355 (443)
312 2hze_A Glutaredoxin-1; thiored 20.3 66 0.0023 19.5 2.3 16 20-35 66-81 (114)
No 1
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.70 E-value=7.7e-17 Score=115.42 Aligned_cols=84 Identities=49% Similarity=0.848 Sum_probs=76.0
Q ss_pred hcceeEEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCC
Q 034345 8 FLMWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVSSNQKP 87 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v~~~~t~ 87 (97)
.++||++.|.+++++++||+..+|++||||++| +++|+|++|++.+......+..+|+++|+++|+|++++.++++
T Consensus 122 ~~~~~~l~D~~~~~~~~~~v~~~P~~~liD~~G----~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~ 197 (218)
T 3u5r_E 122 GYGFPYLKDASQSVAKAYGAACTPDFFLYDRER----RLVYHGQFDDARPGNGKDVTGADLRAAVDAVLKGKDVGTTQVP 197 (218)
T ss_dssp TCCSCEEECTTCHHHHHHTCCEESEEEEECTTC----BEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHTTCCCCSCCCC
T ss_pred CCCccEEECCccHHHHHcCCCCCCeEEEECCCC----cEEEeccccccccccccccCHHHHHHHHHHHHcCCCCCcCCcC
Confidence 578999999999999999999999999999999 7999999999865555566788999999999999999999999
Q ss_pred c----eeecCCC
Q 034345 88 S----IKWHPQT 95 (97)
Q Consensus 88 ~----IKw~~~~ 95 (97)
+ |||+++.
T Consensus 198 ~~GC~i~w~~~~ 209 (218)
T 3u5r_E 198 SIGCNIKWTAGN 209 (218)
T ss_dssp CEEEECCCCCC-
T ss_pred CCCeeEEeCCCC
Confidence 8 9998653
No 2
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.57 E-value=1.4e-14 Score=99.82 Aligned_cols=84 Identities=48% Similarity=0.905 Sum_probs=73.3
Q ss_pred hcceeEEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCC
Q 034345 8 FLMWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVSSNQKP 87 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v~~~~t~ 87 (97)
.++||++.|+++++++.||...+|++||||++| +++|+|.+|+.........+...|+++|++++++++++.++++
T Consensus 109 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G----~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~~~~~~~~~~ 184 (196)
T 2ywi_A 109 GYPFPYLYDETQEVAKAYDAACTPDFYIFDRDL----KCVYRGQLDDSRPNNGIPVTGESIRAALDALLEGRPVPEKQKP 184 (196)
T ss_dssp TCCSCEEECSSCHHHHHHTCCEESEEEEEETTC----BEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHTCCCCSCCCC
T ss_pred CCCceEEECCchHHHHHhCCCCCCeEEEEcCCC----eEEEccccCcccccccCccCHHHHHHHHHHHHcCCCCCCCCCC
Confidence 578999999999999999999999999999999 7999999998753122233567899999999999999999999
Q ss_pred c----eeecCCC
Q 034345 88 S----IKWHPQT 95 (97)
Q Consensus 88 ~----IKw~~~~ 95 (97)
+ |+|+++.
T Consensus 185 ~~gC~~~~~~~~ 196 (196)
T 2ywi_A 185 SIGCSIKWKPSA 196 (196)
T ss_dssp CEEEECCCCCCC
T ss_pred CCceeeeeccCC
Confidence 8 9998874
No 3
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.55 E-value=1.6e-14 Score=99.52 Aligned_cols=83 Identities=34% Similarity=0.598 Sum_probs=71.7
Q ss_pred hcceeEEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCC
Q 034345 8 FLMWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVSSNQKP 87 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v~~~~t~ 87 (97)
.++||++.|.+++++++||+..+|++||||++| +++|+|.+|+... .....+...|+++|++++++++++.++++
T Consensus 95 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G----~i~~~g~~~~~~~-~~g~~~~~~l~~~i~~ll~~~~~~~~~~~ 169 (188)
T 2cvb_A 95 GIFFPYLLDETQEVAKAYRALRTPEVFLFDERR----LLRYHGRVNDNPK-DPSKVQSHDLEAAIEALLRGEEPPLKEAP 169 (188)
T ss_dssp TCCSCEEECSSSHHHHHTTCCEESEEEEECTTC----BEEEEECSSSCTT-CGGGCCCCHHHHHHHHHHTTCCCCSSCCC
T ss_pred CCCceEEECCcchHHHHcCCCCCCeEEEECCCC----cEEEEEecCCccc-cccccCHHHHHHHHHHHHcCCCCCcccCC
Confidence 478999999999999999999999999999999 7999999987642 11222345899999999999999999999
Q ss_pred c----eeecCCC
Q 034345 88 S----IKWHPQT 95 (97)
Q Consensus 88 ~----IKw~~~~ 95 (97)
+ |+|++|+
T Consensus 170 ~~gc~~~~~~~~ 181 (188)
T 2cvb_A 170 AIGCTIKWRPGN 181 (188)
T ss_dssp CCSEECCCCTTC
T ss_pred CCceEEEecCCC
Confidence 8 9998775
No 4
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.99 E-value=1.2e-09 Score=78.38 Aligned_cols=75 Identities=9% Similarity=0.216 Sum_probs=50.3
Q ss_pred hcceeEEEeChhhHHHHhCCc------cCceEEEEecCCCCCeeEEEe--eecCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034345 8 FLMWLITLFQSQDVARDFGAA------CTPEFFLFKKDGRRPFQLVYH--GQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~------~TPe~fvld~~g~~~~~l~Y~--G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~ 79 (97)
.++||++.|.+++++++||+. .+|.+||||++| +++|+ |.++.. .....+.++|++|+..+
T Consensus 119 ~~~fp~l~D~~~~i~~~ygv~~~~~g~~~P~~~liD~~G----~I~~~~~g~~~~~-------~~~~ell~~l~~l~~~~ 187 (220)
T 1zye_A 119 HMNIALLSDLTKQISRDYGVLLEGPGLALRGLFIIDPNG----VIKHLSVNDLPVG-------RSVEETLRLVKAFQFVE 187 (220)
T ss_dssp SCSSEEEECTTSHHHHHTTCEETTTTEECEEEEEECTTS----BEEEEEEECTTCC-------CCHHHHHHHHHHHHHTT
T ss_pred CCceEEEECCcHHHHHHhCCeecCCCcccceEEEECCCC----EEEEEEecCCCCC-------CCHHHHHHHHHHhhhhc
Confidence 579999999999999999999 999999999999 56665 433222 24568999999999875
Q ss_pred CCCCCCCCceeecCCC
Q 034345 80 PVSSNQKPSIKWHPQT 95 (97)
Q Consensus 80 ~v~~~~t~~IKw~~~~ 95 (97)
.... .-+++|++|+
T Consensus 188 ~~~~--~cp~~W~~g~ 201 (220)
T 1zye_A 188 AHGE--VSPANWTPES 201 (220)
T ss_dssp C---------------
T ss_pred ccCC--ccCCCCCCCC
Confidence 3321 2239998774
No 5
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.92 E-value=1.1e-09 Score=78.41 Aligned_cols=77 Identities=9% Similarity=0.100 Sum_probs=57.6
Q ss_pred hcceeEEEeChhhHHHHhCCc-----cCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCCC
Q 034345 8 FLMWLITLFQSQDVARDFGAA-----CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVS 82 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~-----~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v~ 82 (97)
.++||++.|++++++++||+. .+|.+||||++| +++|+..-+... ......|.++|+++...+.-
T Consensus 115 ~~~fp~l~D~~~~~~~~ygv~~~~g~~~p~~~lID~~G----~i~~~~~~~~~~-----~~~~~ell~~l~~l~~~~~~- 184 (213)
T 2i81_A 115 NIKHTLLSDITKSISKDYNVLFDDSVSLRAFVLIDMNG----IVQHLLVNNLAI-----GRSVDEILRIIDAIQHHEKY- 184 (213)
T ss_dssp SCSSEEEECTTSHHHHHTTCEETTTEECEEEEEECTTS----BEEEEEEECTTC-----CCCHHHHHHHHHHHHHHHHH-
T ss_pred CCCceEEECCchHHHHHhCCccccCCcccEEEEECCCC----EEEEEEecCCCC-----CCCHHHHHHHHHHHHhhhhc-
Confidence 579999999999999999999 999999999999 677775323221 12456888999998865421
Q ss_pred CCCCCceeecCCC
Q 034345 83 SNQKPSIKWHPQT 95 (97)
Q Consensus 83 ~~~t~~IKw~~~~ 95 (97)
...-++||++|+
T Consensus 185 -~~~cp~~w~~g~ 196 (213)
T 2i81_A 185 -GDVCPANWQKGK 196 (213)
T ss_dssp -CCBCCTTCCTTS
T ss_pred -CCCcCCCCCcCC
Confidence 122238998775
No 6
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=98.83 E-value=4.6e-09 Score=73.13 Aligned_cols=78 Identities=13% Similarity=0.137 Sum_probs=54.7
Q ss_pred hcceeEEEeChhhHHHHhCCc------cCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034345 8 FLMWLITLFQSQDVARDFGAA------CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~------~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v 81 (97)
.++||++.|.+++++++||+. .+|++||||++|+ ++-+|.|...... ....+.++|++|..-+.-
T Consensus 90 ~~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~--i~~~~~~~~~~~~-------~~~~l~~~l~~l~~~~~~ 160 (186)
T 1n8j_A 90 KIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGI--IQAIEVTAEGIGR-------DASDLLRKIKAAQYVAAH 160 (186)
T ss_dssp GCCSEEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSB--EEEEEEECTTBCC-------CHHHHHHHHHHHHHHHHS
T ss_pred CCceeEEECCchHHHHHhCCccCCCCceeeEEEEECCCCe--EEEEEecCCCCCC-------CHHHHHHHHHHHHHHhhc
Confidence 678999999999999999987 5899999999994 3444445432111 245788889988763322
Q ss_pred CCCCCCceeecCCC
Q 034345 82 SSNQKPSIKWHPQT 95 (97)
Q Consensus 82 ~~~~t~~IKw~~~~ 95 (97)
+ ...-+++|++|+
T Consensus 161 p-~~~~p~~w~~~~ 173 (186)
T 1n8j_A 161 P-GEVCPAKWKEGE 173 (186)
T ss_dssp T-TCBBCTTCCTTS
T ss_pred C-CCccCCCCCCCC
Confidence 1 112239998775
No 7
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=98.83 E-value=7e-09 Score=68.56 Aligned_cols=61 Identities=15% Similarity=0.197 Sum_probs=50.1
Q ss_pred hcceeEEEeChh-----hHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034345 8 FLMWLITLFQSQ-----DVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (97)
Q Consensus 8 ~~~fpvL~D~~q-----~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v 81 (97)
.++||++.|..+ .+++.||...+|++||||++|+ ++-+|.|.++ ...|+++|+.+|+.+..
T Consensus 91 ~~~~~~~~d~~~~~~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~g~~~-----------~~~l~~~i~~ll~~~~~ 156 (158)
T 3eyt_A 91 RIKFPVGVDQPGDGAMPRTMAAYQMRGTPSLLLIDKAGD--LRAHHFGDVS-----------ELLLGAEIATLLGEAAP 156 (158)
T ss_dssp TCCSCEEEECCCSSSSCHHHHHTTCCSSSEEEEECTTSE--EEEEEESCCC-----------HHHHHHHHHHHHTSCCC
T ss_pred CCCceEEEcCccchhhHHHHHHcCCCCCCEEEEECCCCC--EEEEEeCCCC-----------HHHHHHHHHHHhccCCC
Confidence 578999999998 6999999999999999999994 3445557543 34799999999987654
No 8
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=98.81 E-value=7.8e-09 Score=68.28 Aligned_cols=60 Identities=22% Similarity=0.351 Sum_probs=49.5
Q ss_pred hcceeEEEeChhh------HHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCC
Q 034345 8 FLMWLITLFQSQD------VARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQP 80 (97)
Q Consensus 8 ~~~fpvL~D~~q~------va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~ 80 (97)
.++||++.|..+. ++++||...+|..||||++|+ ++-+|.|.++. ..|++.|+.+|+..+
T Consensus 93 ~~~~~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~g~~~~-----------~~l~~~i~~ll~~~~ 158 (160)
T 3lor_A 93 GIKFPVAVDMPREGQRIPSTMKKYRLEGTPSIILADRKGR--IRQVQFGQVDD-----------FVLGLLLGSLLSETD 158 (160)
T ss_dssp TCCSCEEEECCCTTCSSCHHHHHTTCCSSSEEEEECTTSB--EEEEEESCCCH-----------HHHHHHHHHHHTCC-
T ss_pred CCCCcEEECCccccchhhhHHHhcccCccceEEEECCCCc--EEEEecCcCCH-----------HHHHHHHHHHHhccC
Confidence 5789999999998 999999999999999999994 44455576543 379999999998754
No 9
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=98.80 E-value=4.2e-09 Score=75.18 Aligned_cols=75 Identities=9% Similarity=0.158 Sum_probs=54.9
Q ss_pred hcceeEEEeChhhHHHHhCCc------cCceEEEEecCCCCCeeEEEe--eecCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034345 8 FLMWLITLFQSQDVARDFGAA------CTPEFFLFKKDGRRPFQLVYH--GQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~------~TPe~fvld~~g~~~~~l~Y~--G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~ 79 (97)
.++||++.|.+++++++||+. .+|.+||||++| +++|+ |.++.. .....+.++|++|...+
T Consensus 111 ~~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G----~I~~~~~g~~~~~-------~~~~ell~~l~~l~~~~ 179 (211)
T 2pn8_A 111 PIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKG----ILRQITLNDLPVG-------RSVDETLRLVQAFQYTD 179 (211)
T ss_dssp SCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTS----BEEEEEEECTTBC-------CCHHHHHHHHHHHHHHH
T ss_pred CCceEEEECCchHHHHHcCCcccCCCcccceEEEECCCC----EEEEEEecCCCCC-------CCHHHHHHHHHHhhhcc
Confidence 578999999999999999985 799999999999 56665 433221 13457888899888653
Q ss_pred CCCCCCCCceeecCCC
Q 034345 80 PVSSNQKPSIKWHPQT 95 (97)
Q Consensus 80 ~v~~~~t~~IKw~~~~ 95 (97)
... ..-+++|++|+
T Consensus 180 ~~~--~~~p~~w~~g~ 193 (211)
T 2pn8_A 180 KHG--EVCPAGWKPGS 193 (211)
T ss_dssp HHC--CBBCTTCCTTS
T ss_pred cCC--cccCCCCCCCC
Confidence 321 12238998775
No 10
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.79 E-value=4.4e-09 Score=73.65 Aligned_cols=75 Identities=8% Similarity=0.102 Sum_probs=55.8
Q ss_pred hcceeEEEeChhhHHHHhCCc------cCceEEEEecCCCCCeeEEEe--eecCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034345 8 FLMWLITLFQSQDVARDFGAA------CTPEFFLFKKDGRRPFQLVYH--GQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~------~TPe~fvld~~g~~~~~l~Y~--G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~ 79 (97)
.++||++.|.+++++++||+. .+|++||||++| +++|+ |..+.. .+...+.++|+++...+
T Consensus 99 ~~~~p~l~D~~~~~~~~ygv~~~~~g~~~P~~~lid~~G----~i~~~~~g~~~~~-------~~~~ell~~l~~l~~~~ 167 (202)
T 1uul_A 99 QMNIPILADKTKCIMKSYGVLKEEDGVAYRGLFIIDPKQ----NLRQITVNDLPVG-------RDVDEALRLVKAFQFVE 167 (202)
T ss_dssp SCSSCEEECTTCHHHHHHTCEETTTTEECEEEEEECTTS----BEEEEEEECTTBC-------CCHHHHHHHHHHHHHHH
T ss_pred CCceeEEECCchHHHHHcCCccCCCCceeeEEEEECCCC----EEEEEEeCCCCCC-------CCHHHHHHHHHHhhhhh
Confidence 679999999999999999999 999999999999 56655 443222 24568899999988643
Q ss_pred CCCCCCCCceeecCCC
Q 034345 80 PVSSNQKPSIKWHPQT 95 (97)
Q Consensus 80 ~v~~~~t~~IKw~~~~ 95 (97)
.- ...-+++|++|+
T Consensus 168 ~~--~~~~p~~w~~g~ 181 (202)
T 1uul_A 168 KH--GEVCPANWKPGD 181 (202)
T ss_dssp HH--SCBBCTTCCTTS
T ss_pred hc--CCccCCCcCCCC
Confidence 21 111238888764
No 11
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.78 E-value=7.1e-09 Score=71.79 Aligned_cols=77 Identities=13% Similarity=0.112 Sum_probs=55.3
Q ss_pred hcceeEEEeChhhHHHHhCCc-----cCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCCC
Q 034345 8 FLMWLITLFQSQDVARDFGAA-----CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVS 82 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~-----~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v~ 82 (97)
.++||++.|.+++++++||+. .+|++||||++| +++|+..-+... ......+.++|+++...+.-
T Consensus 94 ~~~~~~l~D~~~~~~~~~gv~~~~g~~~P~~~liD~~G----~i~~~~~g~~~~-----~~~~~~l~~~l~~l~~~~~~- 163 (192)
T 2h01_A 94 NIKHTLISDISKSIARSYDVLFNESVALRAFVLIDKQG----VVQHLLVNNLAL-----GRSVDEILRLIDALQHHEKY- 163 (192)
T ss_dssp SCSSEEEECTTSHHHHHTTCEETTTEECCEEEEECTTS----BEEEEEEGGGSS-----GGGHHHHHHHHHHHHHHHHH-
T ss_pred CCCcCeEECCcHHHHHHhCCcCcCCceeeEEEEEcCCC----EEEEEEeCCCCC-----CCCHHHHHHHHHHHhhhhhc-
Confidence 578999999999999999999 999999999999 566664322211 12456788899988854322
Q ss_pred CCCCCceeecCCC
Q 034345 83 SNQKPSIKWHPQT 95 (97)
Q Consensus 83 ~~~t~~IKw~~~~ 95 (97)
...-+++|++|+
T Consensus 164 -~~~cp~~w~~~~ 175 (192)
T 2h01_A 164 -GDVCPANWQKGK 175 (192)
T ss_dssp -CCCCCSSCCCC-
T ss_pred -CCCccCCCCCCC
Confidence 112238888764
No 12
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=98.76 E-value=8.8e-09 Score=74.46 Aligned_cols=75 Identities=9% Similarity=0.236 Sum_probs=49.3
Q ss_pred hcceeEEEeChhhHHHHhCC-----ccCceEEEEecCCCCCeeEEEe--eecCCCCCCCCCCCcHHHHHHHHHHHHcCCC
Q 034345 8 FLMWLITLFQSQDVARDFGA-----ACTPEFFLFKKDGRRPFQLVYH--GQFDDSRPSNNLPVTGRDIRLAIECVLSGQP 80 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA-----~~TPe~fvld~~g~~~~~l~Y~--G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~ 80 (97)
.++||++.|.+++++++||+ ..+|.+||||++| +++|+ |..... .....+.++|++|...+.
T Consensus 119 ~~~fp~l~D~~~~~~~~ygv~~~~g~~~P~~~lID~~G----~I~~~~~g~~~~~-------~~~~ell~~l~~L~~~~~ 187 (221)
T 2c0d_A 119 NVEFTLVSDINKDISKNYNVLYDNSFALRGLFIIDKNG----CVRHQTVNDLPIG-------RNVQEVLRTIDSIIHVDT 187 (221)
T ss_dssp SCSSEEEECTTSHHHHHTTCEETTTEECEEEEEECTTS----BEEEEEEECTTCC-------CCHHHHHHHHHHHHHHHH
T ss_pred CCceEEEECCchHHHHHcCCcccCCCccceEEEECCCC----eEEEEEecCCCCC-------CCHHHHHHHHHHHhhhhc
Confidence 57899999999999999999 4899999999999 56665 543222 135578888998886533
Q ss_pred CCCCCCCceeecCCC
Q 034345 81 VSSNQKPSIKWHPQT 95 (97)
Q Consensus 81 v~~~~t~~IKw~~~~ 95 (97)
-... -+++|++++
T Consensus 188 ~~~~--cp~~W~~g~ 200 (221)
T 2c0d_A 188 SGEV--CPINWKKGQ 200 (221)
T ss_dssp HCCS--CC-------
T ss_pred CCCc--CCCCCCCCC
Confidence 2111 138998764
No 13
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.75 E-value=8e-09 Score=71.92 Aligned_cols=77 Identities=10% Similarity=0.190 Sum_probs=54.3
Q ss_pred hcceeEEEeChhhHHHHhCCc------cCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034345 8 FLMWLITLFQSQDVARDFGAA------CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~------~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v 81 (97)
.++||++.|.+++++++||+. .+|..||||++|+ ++-++.|.++... ....+.++|+++...+.
T Consensus 97 ~~~~p~l~D~~~~~~~~~gv~~~~~~~~~P~~~lid~~G~--i~~~~~g~~~~~~-------~~~e~l~~l~~l~~~~~- 166 (197)
T 1qmv_A 97 PLNIPLLADVTRRLSEDYGVLKTDEGIAYRGLFIIDGKGV--LRQITVNDLPVGR-------SVDEALRLVQAFQYTDE- 166 (197)
T ss_dssp SCSSCEEECTTCHHHHHTTCEETTTTEECEEEEEECTTSB--EEEEEEECTTBCC-------CHHHHHHHHHHHHHHHH-
T ss_pred CCceEEEECCcHHHHHHcCCccCCCCceeeEEEEECCCCc--EEEEEeCCCCCCC-------CHHHHHHHHHhcchhhc-
Confidence 679999999999999999998 7999999999994 3344447654321 24567777877764321
Q ss_pred CCCCCCceeecCCC
Q 034345 82 SSNQKPSIKWHPQT 95 (97)
Q Consensus 82 ~~~~t~~IKw~~~~ 95 (97)
...--+++|++|+
T Consensus 167 -~~~~cp~~w~~g~ 179 (197)
T 1qmv_A 167 -HGEVCPAGWKPGS 179 (197)
T ss_dssp -HCCBBCTTCCTTS
T ss_pred -cCCccCCCcCcCC
Confidence 1111239998875
No 14
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=98.73 E-value=1.6e-08 Score=66.50 Aligned_cols=64 Identities=16% Similarity=0.238 Sum_probs=48.6
Q ss_pred hcceeEEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCCC
Q 034345 8 FLMWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVSSN 84 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v~~~ 84 (97)
.++||++.|.++++++.||...+|.+||+|++|+ +.-+|.|.++ ...|.+.|+.++++...+.+
T Consensus 82 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~G~~~-----------~~~l~~~l~~ll~~~~~~~~ 145 (151)
T 2f9s_A 82 GVNFPVVLDTDRQVLDAYDVSPLPTTFLINPEGK--VVKVVTGTMT-----------ESMIHDYMNLIKPGETSGLE 145 (151)
T ss_dssp TCCSCEEEETTSHHHHHTTCCSSCEEEEECTTSE--EEEEEESCCC-----------HHHHHHHHHHHSCC------
T ss_pred CCCceEEECCchHHHHhcCCCCCCeEEEECCCCc--EEEEEeCCCC-----------HHHHHHHHHHHHhhhhcccc
Confidence 5689999999999999999999999999999994 3344556532 44899999999988765544
No 15
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.73 E-value=4.2e-08 Score=68.16 Aligned_cols=73 Identities=10% Similarity=0.119 Sum_probs=49.0
Q ss_pred hcceeEEEeChhhHHHHhCCc-----cCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCCC
Q 034345 8 FLMWLITLFQSQDVARDFGAA-----CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVS 82 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~-----~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v~ 82 (97)
.++||++.|.+++++++||.. .+|++||||++|+ ++-+|.|..+.. .+...|.++|+++++|..
T Consensus 105 ~~~~~~~~d~~~~~~~~~~v~~~~g~~~P~~~lid~~G~--i~~~~~g~~~~~-------~~~~~l~~~l~~l~~~~~-- 173 (195)
T 2bmx_A 105 TLPFPMLSDIKRELSQAAGVLNADGVADRVTFIVDPNNE--IQFVSATAGSVG-------RNVDEVLRVLDALQSDEL-- 173 (195)
T ss_dssp GCCSCEEECTTSHHHHHHTCBCTTSSBCEEEEEECTTSB--EEEEEEECTTCC-------CCHHHHHHHHHHHHC-----
T ss_pred CCceeEEeCCchHHHHHhCCcccCCCccceEEEEcCCCe--EEEEEecCCCCC-------CCHHHHHHHHHHHhhCCC--
Confidence 688999999999999999999 9999999999994 344444554222 135689999999998542
Q ss_pred CCCCCceeecCCC
Q 034345 83 SNQKPSIKWHPQT 95 (97)
Q Consensus 83 ~~~t~~IKw~~~~ 95 (97)
.+++|+++.
T Consensus 174 ----~p~~w~~~~ 182 (195)
T 2bmx_A 174 ----CASNWRKGD 182 (195)
T ss_dssp -------------
T ss_pred ----cCcccccCC
Confidence 237787653
No 16
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=98.73 E-value=3.5e-08 Score=63.68 Aligned_cols=59 Identities=15% Similarity=0.262 Sum_probs=47.6
Q ss_pred hcceeEEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034345 8 FLMWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~ 79 (97)
.++||++.|..+++++.||...+|++||+|++|+ +.-+|.|.. +...|+++|+.+|+..
T Consensus 89 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~g~~-----------~~~~l~~~l~~~l~~~ 147 (148)
T 2b5x_A 89 DITQPIFVDSDHALTDAFENEYVPAYYVFDKTGQ--LRHFQAGGS-----------GMKMLEKRVNRVLAET 147 (148)
T ss_dssp TCCSCEEECSSCHHHHHTCCCCSSEEEEECTTCB--EEEEEESCS-----------TTHHHHHHHHHHHTTC
T ss_pred CCCcceEECCchhHHHHhCCCCCCEEEEECCCCc--EEEEecCCC-----------CHHHHHHHHHHHHhcc
Confidence 5789999999999999999999999999999994 333444542 1337999999998764
No 17
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.71 E-value=3.5e-09 Score=75.87 Aligned_cols=74 Identities=12% Similarity=0.201 Sum_probs=51.1
Q ss_pred hcceeEEEeChhhHHHHhCCc------cCceEEEEecCCCCCeeEEEe--eecCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034345 8 FLMWLITLFQSQDVARDFGAA------CTPEFFLFKKDGRRPFQLVYH--GQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~------~TPe~fvld~~g~~~~~l~Y~--G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~ 79 (97)
.++||++.|.+++++++||+. .+|.+||||++| +++|+ |..+... .+++.++.|.+.+
T Consensus 132 ~~~~~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G----~I~~~~~g~~~~~~----------~~~~il~~l~~l~ 197 (222)
T 3ztl_A 132 HMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNG----ILRQITINDKPVGR----------SVDETLRLLDAFQ 197 (222)
T ss_dssp SCSSCEEECSSSHHHHHTTCBCTTTSSBCEEEEEECTTS----EEEEEEEECTTBCC----------CHHHHHHHHHHHH
T ss_pred ccceeEEeCCchHHHHHcCCeecCCCCccceEEEECCCC----eEEEEEecCCCCCC----------CHHHHHHHHHHhh
Confidence 689999999999999999998 899999999999 56555 5433221 2444444444444
Q ss_pred CCCCC-CCCceeecCCC
Q 034345 80 PVSSN-QKPSIKWHPQT 95 (97)
Q Consensus 80 ~v~~~-~t~~IKw~~~~ 95 (97)
.+... ..-+|||++++
T Consensus 198 ~~~~~~~~c~~~w~~~~ 214 (222)
T 3ztl_A 198 FVEKHGEVCPVNWKRGQ 214 (222)
T ss_dssp HHHHHSCBBCTTCCTTS
T ss_pred cccccCccCCcCcCCCC
Confidence 44221 12239998774
No 18
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.70 E-value=3.9e-08 Score=67.62 Aligned_cols=78 Identities=14% Similarity=0.171 Sum_probs=50.5
Q ss_pred hcceeEEEeChhhHHHHhCCc------cCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034345 8 FLMWLITLFQSQDVARDFGAA------CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~------~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v 81 (97)
.++||++.|.+++++++||.. .+|.+||||++|+ ++-+|.|...... +...|.++|+++++.+.-
T Consensus 91 ~~~~~~~~d~~~~~~~~~~v~~~~~g~~~P~~~lid~~G~--i~~~~~g~~~~~~-------~~~~l~~~l~~l~~~~~~ 161 (187)
T 1we0_A 91 SIEYIMIGDPSQTISRQFDVLNEETGLADRGTFIIDPDGV--IQAIEINADGIGR-------DASTLINKVKAAQYVREN 161 (187)
T ss_dssp TCCSEEEECTTCHHHHHTTCEETTTTEECEEEEEECTTSB--EEEEEEECTTSCC-------CTTHHHHHHHHHHHHHTS
T ss_pred CCCceEEECCchHHHHHhCCCcCCCCceeeEEEEECCCCe--EEEEEecCCCCCC-------CHHHHHHHHHHHhhhhhC
Confidence 588999999999999999999 9999999999994 3444556532211 233788999999875432
Q ss_pred CCCCCCceeecCCC
Q 034345 82 SSNQKPSIKWHPQT 95 (97)
Q Consensus 82 ~~~~t~~IKw~~~~ 95 (97)
+ ...-+++|.+|+
T Consensus 162 ~-~~~~p~~w~~~~ 174 (187)
T 1we0_A 162 P-GEVCPAKWEEGG 174 (187)
T ss_dssp T-TCCC--------
T ss_pred C-CcccccccccCC
Confidence 1 122238997764
No 19
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=98.69 E-value=3.2e-08 Score=64.81 Aligned_cols=64 Identities=19% Similarity=0.252 Sum_probs=53.2
Q ss_pred hcceeEEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCCC
Q 034345 8 FLMWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVSSN 84 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v~~~ 84 (97)
.++||++.|...++++.||...+|++||||++|+ +.-+|.|..+ ...|.+.|+.+|.+...+-.
T Consensus 85 ~~~~~~~~d~~~~~~~~~~i~~~P~~~lid~~G~--i~~~~~g~~~-----------~~~l~~~l~~ll~~~~~~~~ 148 (153)
T 2l5o_A 85 GLPFTVMYDADKAVGQAFGTQVYPTSVLIGKKGE--ILKTYVGEPD-----------FGKLYQEIDTAWRNSDAEGH 148 (153)
T ss_dssp TCCSEEEECSSCHHHHHHTCCSSSEEEEECSSSC--CCEEEESSCC-----------HHHHHHHHHHHHHCCSSCCT
T ss_pred CCCceEEcCchHHHHHHcCCCccCeEEEECCCCc--EEEEEcCCCC-----------HHHHHHHHHHHHHhhhhccc
Confidence 4678999999999999999999999999999996 4567888643 34799999999998766543
No 20
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=98.69 E-value=3.1e-09 Score=77.68 Aligned_cols=77 Identities=10% Similarity=0.127 Sum_probs=51.3
Q ss_pred hcceeEEEeChhhHHHHhCCc------cCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034345 8 FLMWLITLFQSQDVARDFGAA------CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~------~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v 81 (97)
.++||++.|.+++++++||+. .+|.+||||++| +++|+..-+... ......+.++|+++-.-.+-
T Consensus 140 ~~~fp~l~D~~~~v~~~ygv~~~~~g~~~p~~flID~~G----~I~~~~~~~~~~-----~~~~~eil~~l~~lq~~~~~ 210 (240)
T 3qpm_A 140 PMKIPLLSDLTHQISKDYGVYLEDQGHTLRGLFIIDEKG----VLRQITMNDLPV-----GRSVDETLRLVQAFQYTDKH 210 (240)
T ss_dssp SCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTS----BEEEEEEECTTB-----CCCHHHHHHHHHHHHHHHHH
T ss_pred CCceeEEeCchHHHHHHhCCccccCCCccceEEEEcCCC----eEEEEEecCCCC-----CCCHHHHHHHHHHhhhhhhc
Confidence 589999999999999999998 799999999999 677774422221 11233455555554321110
Q ss_pred CCCCCCceeecCCC
Q 034345 82 SSNQKPSIKWHPQT 95 (97)
Q Consensus 82 ~~~~t~~IKw~~~~ 95 (97)
..--+|||++|+
T Consensus 211 --~~~cp~~W~~g~ 222 (240)
T 3qpm_A 211 --GEVCPAGWKPGS 222 (240)
T ss_dssp --SCBBCTTCCTTS
T ss_pred --CCccCCCCCCCC
Confidence 111238998775
No 21
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.68 E-value=5.5e-08 Score=65.98 Aligned_cols=60 Identities=18% Similarity=0.303 Sum_probs=45.1
Q ss_pred hcceeEEEeChhhHHHHhCCc-----------cCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHH
Q 034345 8 FLMWLITLFQSQDVARDFGAA-----------CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECV 75 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~-----------~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~al 75 (97)
.++||+|.|++++++++||+. ..|.+||||++| +++|+..-++.. . ......+.++|++|
T Consensus 86 ~~~~p~l~D~~~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G----~I~~~~~~~~~~--~--~~~~~eil~~l~~L 156 (157)
T 4g2e_A 86 KLNFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEG----KVRYKWVSDDPT--K--EPPYDEIEKVVKSL 156 (157)
T ss_dssp TCCSEEEECTTSHHHHHTTCEEECTTSTTCEEECEEEEEECTTS----BEEEEEEESSTT--C--CCCHHHHHHHHHHT
T ss_pred CCcEEEEEcCCcHHHHHcCCccccccCCCcceeeeeEEEECCCC----EEEEEEECCCCC--C--CCCHHHHHHHHHHh
Confidence 578999999999999999974 478899999999 688876544432 1 11244677777765
No 22
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.66 E-value=2.6e-08 Score=66.48 Aligned_cols=54 Identities=15% Similarity=0.380 Sum_probs=44.4
Q ss_pred ceeEEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034345 10 MWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (97)
Q Consensus 10 ~fpvL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG 78 (97)
+||++.| ++++++.||...+|++||||++| ++++.|.+. +...|++.|++++.|
T Consensus 112 ~~~~~~d-~~~~~~~~~v~~~P~~~lid~~G----~i~~~g~~~----------~~~~l~~~l~~l~~g 165 (165)
T 3ha9_A 112 SWIMVMD-DGSLVEKFNVRSIDYIVIMDKSS----NVLYAGTTP----------SLGELESVIKSVQGG 165 (165)
T ss_dssp TSEEEEC-CSHHHHHTTCCSSSEEEEEETTC----CEEEEEESC----------CHHHHHHHHHHC---
T ss_pred CeeEEeC-hHHHHHHhCCCCceEEEEEcCCC----cEEEeCCCC----------CHHHHHHHHHHHhcC
Confidence 8999999 99999999999999999999999 577777762 133799999998875
No 23
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=98.62 E-value=2.6e-08 Score=73.03 Aligned_cols=77 Identities=13% Similarity=0.192 Sum_probs=54.2
Q ss_pred hcceeEEEeChhhHHHHhCCc------------cCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHH
Q 034345 8 FLMWLITLFQSQDVARDFGAA------------CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECV 75 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~------------~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~al 75 (97)
.++||++.|.+++++++||+. .+|.+||||++| +|+++-.-+.... .+..++.++|++|
T Consensus 93 ~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G----~I~~~~~~~~~~g-----r~~~eilr~l~~L 163 (233)
T 2v2g_A 93 DMPYPIIADETRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDK----KLKLSILYPATTG-----RNFSEILRVIDSL 163 (233)
T ss_dssp SCSSCEEECTTCHHHHHTTCEEEEEECTTCCEEECEEEEEECTTS----BEEEEEEECTTBC-----CCHHHHHHHHHHH
T ss_pred CCceEEEECChHHHHHHhCCcCcccccCCCcccccceEEEECCCC----EEEEEEecCCCCC-----CCHHHHHHHHHHH
Confidence 679999999999999999975 689999999999 4555433222211 1355788899998
Q ss_pred HcCCCCCCCCCCceeecCCC
Q 034345 76 LSGQPVSSNQKPSIKWHPQT 95 (97)
Q Consensus 76 LaG~~v~~~~t~~IKw~~~~ 95 (97)
.....- ...-+++|++|+
T Consensus 164 q~~~~~--~~~~p~~W~~g~ 181 (233)
T 2v2g_A 164 QLTAQK--KVATPADWQPGD 181 (233)
T ss_dssp HHHHHS--SEEBCTTCCTTS
T ss_pred HhhccC--CccCCCCcCcCC
Confidence 876432 111228888764
No 24
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=98.60 E-value=7.5e-09 Score=76.63 Aligned_cols=77 Identities=10% Similarity=0.133 Sum_probs=44.4
Q ss_pred hcceeEEEeChhhHHHHhCCc------cCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034345 8 FLMWLITLFQSQDVARDFGAA------CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~------~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v 81 (97)
.++||+|.|.+++++++||+. .+|.+||||++| +|+|+..-+... ......+.++|+++-...+-
T Consensus 154 ~~~fp~l~D~~~~va~~ygv~~~~~g~~~p~tflID~~G----~I~~~~~~~~~~-----~~~~~eil~~L~alq~~~~~ 224 (254)
T 3tjj_A 154 PIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKG----ILRQITLNDLPV-----GRSVDETLRLVQAFQYTDKH 224 (254)
T ss_dssp SCSSCEEECTTSHHHHHHTCEETTTTEECEEEEEECTTS----BEEEEEEECTTC-----CCCHHHHHHHHHHHHHHHHH
T ss_pred ccccceeeCcHHHHHHHcCCccccCCCccceEEEECCCC----eEEEEEecCCCC-----CCCHHHHHHHHHhhcccccc
Confidence 589999999999999999986 689999999999 677764433221 11233555555554322111
Q ss_pred CCCCCCceeecCCC
Q 034345 82 SSNQKPSIKWHPQT 95 (97)
Q Consensus 82 ~~~~t~~IKw~~~~ 95 (97)
...-+|||++|+
T Consensus 225 --~~~cp~~W~~g~ 236 (254)
T 3tjj_A 225 --GEVAPAGWKPGS 236 (254)
T ss_dssp --C-----------
T ss_pred --CccccCCCCCCC
Confidence 112249999875
No 25
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.59 E-value=1.5e-07 Score=61.51 Aligned_cols=65 Identities=17% Similarity=0.226 Sum_probs=47.8
Q ss_pred hcceeEEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCC
Q 034345 8 FLMWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVSS 83 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v~~ 83 (97)
.++||++.|.++++++.||...+|.+||||++|+ +..++.|.... +...|++.|++++.+.+-+.
T Consensus 84 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~g~~~~---------~~~~l~~~i~~~~~~~~~~~ 148 (152)
T 3gl3_A 84 PAEFTVAFDPKGQTPRLYGVKGMPTSFLIDRNGK--VLLQHVGFRPA---------DKEALEQQILAALGGNEGHH 148 (152)
T ss_dssp CCCSEEEECTTCHHHHHTTCCSSSEEEEECTTSB--EEEEEESCCTT---------THHHHHHHHHHHTC------
T ss_pred CCCCceeECCcchhHHHcCCCCCCeEEEECCCCC--EEEEEccCCCc---------CHHHHHHHHHHHHccccccc
Confidence 4689999999999999999999999999999994 33445554222 24589999999988866543
No 26
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.58 E-value=1e-07 Score=66.18 Aligned_cols=77 Identities=9% Similarity=0.142 Sum_probs=50.4
Q ss_pred hhcceeEEEeChhhHHHHhCCc-----cCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034345 7 LFLMWLITLFQSQDVARDFGAA-----CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (97)
Q Consensus 7 ~~~~fpvL~D~~q~va~a~gA~-----~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v 81 (97)
..++||++.|.+++++++||.. .+|+.||||++|+ ++-++.|.++.. .+...|.++|+++...++-
T Consensus 95 ~~~~~~~~~d~~~~~~~~~~v~~~~g~~~P~~~lid~~G~--i~~~~~g~~~~~-------~~~~~l~~~l~~l~~~~~~ 165 (198)
T 1zof_A 95 GQVSFPMVADITKSISRDYDVLFEEAIALRGAFLIDKNMK--VRHAVINDLPLG-------RNADEMLRMVDALLHFEEH 165 (198)
T ss_dssp CCCSSCEEECTTSHHHHHTTCEETTTEECEEEEEEETTTE--EEEEEEESSSCC-------CHHHHHHHHHHHHHHHHSS
T ss_pred cCceeEEEECCchHHHHHhCCcccCCcccceEEEECCCCE--EEEEEecCCCCC-------CCHHHHHHHHHHHHHhhcc
Confidence 4678999999999999999999 9999999999994 333444543322 1356888999998853321
Q ss_pred CCCCCCceeecCC
Q 034345 82 SSNQKPSIKWHPQ 94 (97)
Q Consensus 82 ~~~~t~~IKw~~~ 94 (97)
..--+.+|.++
T Consensus 166 --~~~~p~~w~~~ 176 (198)
T 1zof_A 166 --GEVCPAGWRKG 176 (198)
T ss_dssp --CCCCC------
T ss_pred --CCccCCcCcCC
Confidence 11112677654
No 27
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=98.57 E-value=5.2e-08 Score=70.32 Aligned_cols=78 Identities=8% Similarity=0.077 Sum_probs=54.1
Q ss_pred hhcceeEEEeChhhHHHHhCCc------------cCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHH
Q 034345 7 LFLMWLITLFQSQDVARDFGAA------------CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (97)
Q Consensus 7 ~~~~fpvL~D~~q~va~a~gA~------------~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~a 74 (97)
..++||++.|.+++++++||+. .+|.+||||++|+ ++..+.|..... .+...+.++|++
T Consensus 93 ~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~--I~~~~~~~~~~g-------~~~~ell~~i~~ 163 (220)
T 1xcc_A 93 NKWEIPIVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKK--IKATVLYPATTG-------RNAHEILRVLKS 163 (220)
T ss_dssp SCCCCCEEECTTSHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSB--EEEEEEECTTBC-------CCHHHHHHHHHH
T ss_pred CCCcceeEECchhHHHHHhCCCCcccccCCCCCcccceEEEECCCCE--EEEEEecCCCCC-------CCHHHHHHHHHH
Confidence 3678999999999999999984 5899999999994 344444433211 135578888999
Q ss_pred HHcCCCCCCCCCCceeecCCC
Q 034345 75 VLSGQPVSSNQKPSIKWHPQT 95 (97)
Q Consensus 75 lLaG~~v~~~~t~~IKw~~~~ 95 (97)
|....+- ...-+++|++|.
T Consensus 164 lq~~~~~--~~~~p~~w~~g~ 182 (220)
T 1xcc_A 164 LQLTYTT--PVATPVNWNEGD 182 (220)
T ss_dssp HHHHHHS--SEEBCTTCCTTS
T ss_pred HHhhhcC--CcccCCCcCcCC
Confidence 8765432 111227787764
No 28
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.57 E-value=8.4e-08 Score=62.87 Aligned_cols=65 Identities=15% Similarity=0.181 Sum_probs=46.5
Q ss_pred hcceeEEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCC
Q 034345 8 FLMWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVSS 83 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v~~ 83 (97)
.++||++.|.++.+++.||...+|.+||||++|+ +.-+|.|..+.. ...+.+.|+++..+.+.+.
T Consensus 85 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~g~~~~~---------~~~l~~~l~~l~~~~~~~~ 149 (154)
T 3kcm_A 85 GFTLPVLLDADKRVGKLYGTTGVPETFVIDRHGV--ILKKVVGAMEWD---------HPEVIAFLNNELSKAREGH 149 (154)
T ss_dssp CCCCCEEECTTCHHHHHHTCCSBCEEEEECTTSB--EEEEEESCCCTT---------SHHHHHHHHTC--------
T ss_pred CCCeeEEecCchHHHHHhCCCCCCeEEEECCCCc--EEEEEcCCCccc---------cHHHHHHHHHHHHHhhhcc
Confidence 5789999999999999999999999999999994 344555764433 2378899988888766554
No 29
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.54 E-value=9.8e-08 Score=60.87 Aligned_cols=55 Identities=9% Similarity=0.168 Sum_probs=44.7
Q ss_pred hcceeEEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEe---eecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 8 FLMWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYH---GQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~---G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
.++||++.|+.+++++.||...+|.+||+|++|+ +. +|. |..+ ...|++.|++++
T Consensus 78 ~~~~~~~~d~~~~~~~~~~i~~~P~~~lid~~G~--i~-~~~~~~g~~~-----------~~~l~~~l~~ll 135 (136)
T 1lu4_A 78 NLNFTNLNDADGVIWARYNVPWQPAFVFYRADGT--ST-FVNNPTAAMS-----------QDELSGRVAALT 135 (136)
T ss_dssp TCCSEEEECTTSHHHHHTTCCSSSEEEEECTTSC--EE-EECCSSSCCC-----------HHHHHHHHHHC-
T ss_pred CCCceEEECCchhHHHhcCCCCCCEEEEECCCCc--EE-EEEcCCCccC-----------HHHHHHHHHHHh
Confidence 5689999999999999999999999999999995 33 566 5432 447888888776
No 30
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=98.51 E-value=6.4e-07 Score=59.03 Aligned_cols=61 Identities=21% Similarity=0.388 Sum_probs=51.1
Q ss_pred hcceeEEEeC---hhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCCC
Q 034345 8 FLMWLITLFQ---SQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVSSN 84 (97)
Q Consensus 8 ~~~fpvL~D~---~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v~~~ 84 (97)
.++||++.|. .++++++||...+|.+||||++| +++++. ++ ...|++.|+.++++.....+
T Consensus 85 ~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G----~i~~~~-~~-----------~~~l~~~l~~l~~~~~~~~~ 148 (152)
T 2lrn_A 85 KSYWNQVLLQKDDVKDVLESYCIVGFPHIILVDPEG----KIVAKE-LR-----------GDDLYNTVEKFVNGAKEGHH 148 (152)
T ss_dssp TCCSEEEEECHHHHHHHHHHTTCCSSCEEEEECTTS----EEEEEC-CC-----------TTHHHHHHHHHHTSSSSCCS
T ss_pred CCCCeEEecccchhHHHHHHhCCCcCCeEEEECCCC----eEEEee-CC-----------HHHHHHHHHHHHhhcccccc
Confidence 5789999999 79999999999999999999999 788775 21 12799999999998766544
No 31
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=98.51 E-value=1.5e-07 Score=59.70 Aligned_cols=54 Identities=15% Similarity=0.293 Sum_probs=45.5
Q ss_pred ceeEEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 10 MWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 10 ~fpvL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
+||++.|.++++++.||...+|.+||+|++|+ +. +|.|..+ ...|.+.|+++++
T Consensus 82 ~~~~~~d~~~~~~~~~~i~~~P~~~~id~~g~--i~-~~~g~~~-----------~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 82 TFTQLADTDGSVWANFGVTQQPAYAFVDPHGN--VD-VVRGRMS-----------QDELTRRVTALTS 135 (136)
T ss_dssp TSEEEECTTCHHHHHTTCCSSSEEEEECTTCC--EE-EEESCCC-----------HHHHHHHHHHHC-
T ss_pred ceEEEEcCCcHHHHHcCCCCCceEEEECCCCC--EE-EEecCCC-----------HHHHHHHHHHHhc
Confidence 89999999999999999999999999999995 34 7888643 3478888888764
No 32
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=98.51 E-value=7.4e-08 Score=69.69 Aligned_cols=78 Identities=13% Similarity=0.105 Sum_probs=53.2
Q ss_pred hhcceeEEEeChhhHHHHhCCc------------cCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHH
Q 034345 7 LFLMWLITLFQSQDVARDFGAA------------CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (97)
Q Consensus 7 ~~~~fpvL~D~~q~va~a~gA~------------~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~a 74 (97)
..++||++.|.+++++++||.. .+|.+||||++|+ ++..+.|..... .+...+.++|++
T Consensus 96 ~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~--I~~~~~~~~~~g-------r~~~eil~~i~~ 166 (224)
T 1prx_A 96 EKLPFPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKK--LKLSILYPATTG-------RNFDEILRVVIS 166 (224)
T ss_dssp SCCSSCEEECTTCHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSB--EEEEEECCTTBC-------CCHHHHHHHHHH
T ss_pred cCcCcceeecCchHHHHHhCCCCcccccCCCccccceEEEEECCCCE--EEEEEecCCCCC-------CCHHHHHHHHHH
Confidence 4689999999999999999974 4799999999994 333444432211 135578888999
Q ss_pred HHcCCCCCCCCCCceeecCCC
Q 034345 75 VLSGQPVSSNQKPSIKWHPQT 95 (97)
Q Consensus 75 lLaG~~v~~~~t~~IKw~~~~ 95 (97)
|.....-. ..-+++|++|+
T Consensus 167 l~~~~~~~--~~~p~~W~~g~ 185 (224)
T 1prx_A 167 LQLTAEKR--VATPVDWKDGD 185 (224)
T ss_dssp HHHHHHHC--EEBCTTCCTTS
T ss_pred HHhhccCC--cCCCCCCCCCC
Confidence 88753221 11126777664
No 33
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=98.49 E-value=5e-07 Score=61.90 Aligned_cols=61 Identities=15% Similarity=0.180 Sum_probs=43.4
Q ss_pred hhcceeEEEeChhhHHHHhCCc----------cCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHH
Q 034345 7 LFLMWLITLFQSQDVARDFGAA----------CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECV 75 (97)
Q Consensus 7 ~~~~fpvL~D~~q~va~a~gA~----------~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~al 75 (97)
..++||+|.|++++++++||+. ..|.+||||++| +++|+-.-++.. +. .....+-++|++|
T Consensus 88 ~~~~fp~l~D~~~~v~~~ygv~~~~~~~~~~~~~p~tflID~~G----~I~~~~~~~~~~--~~--~~~~eil~~l~~l 158 (164)
T 4gqc_A 88 NRLAFNLLSDYNREVIKLYNVYHEDLKGLKMVAKRAVFIVKPDG----TVAYKWVTDNPL--NE--PDYDEVVREANKI 158 (164)
T ss_dssp TTCCSEEEECTTSHHHHHTTCEEEEETTEEEEECCEEEEECTTS----BEEEEEECSCTT--CC--CCHHHHHHHHHHH
T ss_pred cCcccceeecCchHHHHHcCCcccccccCcCCeeeEEEEECCCC----EEEEEEEeCCCC--CC--CCHHHHHHHHHHH
Confidence 3679999999999999999974 478999999999 788875433331 11 1233455556554
No 34
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=98.46 E-value=2.5e-07 Score=58.29 Aligned_cols=53 Identities=13% Similarity=0.206 Sum_probs=42.6
Q ss_pred ceeEEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHH
Q 034345 10 MWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECV 75 (97)
Q Consensus 10 ~fpvL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~al 75 (97)
+||++.|+++++++.||...+|.+||+|++|+ +.-+|.|..+ ...|.+.|+++
T Consensus 85 ~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~g~~~-----------~~~l~~~l~~l 137 (138)
T 4evm_A 85 NLPVLVDPSGKLLETYGVRSYPTQAFIDKEGK--LVKTHPGFME-----------KDAILQTLKEL 137 (138)
T ss_dssp TCCEEECTTCHHHHHTTCCSSSEEEEECTTCC--EEEEEESCCC-----------HHHHHHHHHHC
T ss_pred CeeEEECcchHHHHHcCcccCCeEEEECCCCc--EEEeecCCCc-----------HHHHHHHHHhh
Confidence 89999999999999999999999999999995 4445565432 34677777654
No 35
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=98.45 E-value=2.6e-07 Score=60.87 Aligned_cols=63 Identities=11% Similarity=0.171 Sum_probs=46.9
Q ss_pred hcceeEEEeC---hhhHHHHhC--CccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCCC
Q 034345 8 FLMWLITLFQ---SQDVARDFG--AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVS 82 (97)
Q Consensus 8 ~~~fpvL~D~---~q~va~a~g--A~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v~ 82 (97)
.++||++.|. ..+++++|| ...+|+.||||++|+ ++-+|.|.++ ...|+++|+.++++++-+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~g~~~-----------~~~l~~~l~~l~~~~~~~ 145 (151)
T 3raz_A 79 PVSYPIWRYTGANSRNFMKTYGNTVGVLPFTVVEAPKCG--YRQTITGEVN-----------EKSLTDAVKLAHSKCREG 145 (151)
T ss_dssp CCSSCEEEECCSCHHHHHHTTTCCSCCSSEEEEEETTTT--EEEECCSCCC-----------HHHHHHHHHHHHTC----
T ss_pred CCCCceEecCccchHHHHHHhCCccCCCCEEEEECCCCc--EEEEECCCCC-----------HHHHHHHHHHHHHHhhcc
Confidence 5689999887 466889999 899999999999995 4445556542 448999999999987654
Q ss_pred C
Q 034345 83 S 83 (97)
Q Consensus 83 ~ 83 (97)
.
T Consensus 146 ~ 146 (151)
T 3raz_A 146 H 146 (151)
T ss_dssp -
T ss_pred c
Confidence 3
No 36
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=98.44 E-value=1.8e-07 Score=69.57 Aligned_cols=74 Identities=15% Similarity=0.192 Sum_probs=53.9
Q ss_pred hcceeEEEeChhhHHHHhCCc-------cCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCC
Q 034345 8 FLMWLITLFQSQDVARDFGAA-------CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQP 80 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~-------~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~ 80 (97)
.++||++.|.+++++++||+. .+|.+||||++| +++++..-+.... .+..++..+|+++.....
T Consensus 95 ~i~fPil~D~~~~ia~~ygv~~~~~g~~~~p~~fIID~dG----~I~~~~~~~~~~g-----r~~~Ellr~I~alq~~~~ 165 (249)
T 3a2v_A 95 RIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARG----VIRTMLYYPMELG-----RLVDEILRIVKALKLGDS 165 (249)
T ss_dssp CCCSCEEECTTSHHHHHHTCCCTTCSSSCCEEEEEECTTS----BEEEEEEECTTBC-----CCHHHHHHHHHHHHHHHH
T ss_pred CCceeEEECCchHHHHHhCCccccCCCcccceEEEECCCC----eEEEEEecCCccc-----chhHHHHHHHHHHHhccc
Confidence 689999999999999999987 899999999999 5666543332211 135688999999886542
Q ss_pred CCCCCCCceeecC
Q 034345 81 VSSNQKPSIKWHP 93 (97)
Q Consensus 81 v~~~~t~~IKw~~ 93 (97)
- ...-+++| +
T Consensus 166 ~--~~~~Pa~W-~ 175 (249)
T 3a2v_A 166 L--KRAVPADW-P 175 (249)
T ss_dssp H--TCBBCTTT-T
T ss_pred c--CccCCCCC-C
Confidence 2 11222677 6
No 37
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.42 E-value=5.6e-07 Score=60.38 Aligned_cols=62 Identities=15% Similarity=0.248 Sum_probs=46.0
Q ss_pred hcceeEEEeChhhHHHHhCCcc----CceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034345 8 FLMWLITLFQSQDVARDFGAAC----TPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~~----TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG 78 (97)
.++||++.|.+++++++||+.. +|.+||||++|+ ++-+|.|.++... ....+.++|+++-.+
T Consensus 85 ~~~~~~~~d~~~~~~~~~~v~~~~~~~P~~~lid~~G~--i~~~~~g~~~~~~-------~~~~il~~l~~l~~~ 150 (161)
T 3drn_A 85 KLPFILVSDPDKKIRELYGAKGFILPARITFVIDKKGI--IRHIYNSQMNPAN-------HVNEALKALKQIKEE 150 (161)
T ss_dssp TCCSEEEECTTSHHHHHTTCCCSSSCCCEEEEECTTSB--EEEEEECSSCTTH-------HHHHHHHHHHHHHHH
T ss_pred CCCceEEECCcHHHHHHcCCCCcCcccceEEEECCCCE--EEEEEecCCCCCc-------CHHHHHHHHHHhhhh
Confidence 5789999999999999999998 999999999995 4446666544331 233555666665443
No 38
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=98.41 E-value=1.4e-07 Score=61.99 Aligned_cols=62 Identities=13% Similarity=0.130 Sum_probs=48.3
Q ss_pred hcceeEEEe---ChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCCC
Q 034345 8 FLMWLITLF---QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVS 82 (97)
Q Consensus 8 ~~~fpvL~D---~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v~ 82 (97)
.++||++.| ..+.+++.||...+|.+||||++|+ +.-+|.|.. +...|++.|+.++.+++-.
T Consensus 85 ~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~g~~-----------~~~~l~~~l~~~~~~~~~~ 149 (154)
T 3ia1_A 85 PRFIPLLASDRDRPHEVAARFKVLGQPWTFVVDREGK--VVALFAGRA-----------GREALLDALLLAGADLEGH 149 (154)
T ss_dssp TTEEECBCCSSCCHHHHHTTSSBCSSCEEEEECTTSE--EEEEEESBC-----------CHHHHHHHHHHTTCCC---
T ss_pred CCCcccccccccchHHHHHHhCCCcccEEEEECCCCC--EEEEEcCCC-----------CHHHHHHHHHhccCccccc
Confidence 468999998 8999999999999999999999994 344455543 2448999999998887644
No 39
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.38 E-value=7.9e-07 Score=59.22 Aligned_cols=59 Identities=14% Similarity=0.101 Sum_probs=43.1
Q ss_pred hcceeEEEeChhhHHHHhCCcc------------CceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHH
Q 034345 8 FLMWLITLFQSQDVARDFGAAC------------TPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECV 75 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~~------------TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~al 75 (97)
.++||++.|.+++++++||... +|.+||||++| +++|+- -+... ......+.++|+++
T Consensus 91 ~~~~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G----~i~~~~-~~~~~-----~~~~~~il~~l~~l 160 (163)
T 3gkn_A 91 GFAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEG----QVVQAW-RKVKV-----AGHADAVLAALKAH 160 (163)
T ss_dssp CCSSCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTS----CEEEEE-CSCCS-----TTHHHHHHHHHHHH
T ss_pred CCCceEEECCcHHHHHHhCCccccccccccccCcceEEEEECCCC----eEEEEE-cCCCc-----ccCHHHHHHHHHHH
Confidence 5789999999999999999987 99999999999 566554 11111 11234566666665
Q ss_pred H
Q 034345 76 L 76 (97)
Q Consensus 76 L 76 (97)
.
T Consensus 161 ~ 161 (163)
T 3gkn_A 161 A 161 (163)
T ss_dssp C
T ss_pred h
Confidence 4
No 40
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.38 E-value=8.5e-07 Score=58.91 Aligned_cols=46 Identities=15% Similarity=0.250 Sum_probs=40.2
Q ss_pred hcceeEEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCC
Q 034345 8 FLMWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDS 55 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~ 55 (97)
.++||++.|..+++++.||...+|.+||||++|+ ++-+|.|..+..
T Consensus 94 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~G~~~~~ 139 (158)
T 3hdc_A 94 PVSFNFLSDATGQVQQRYGANRLPDTFIVDRKGI--IRQRVTGGIEWD 139 (158)
T ss_dssp CCSCEEEECTTSHHHHHTTCCSSSEEEEECTTSB--EEEEEESCCCTT
T ss_pred CCCceEEECchHHHHHHhCCCCcceEEEEcCCCC--EEEEEeCCCccc
Confidence 5689999999999999999999999999999996 566777876555
No 41
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=98.37 E-value=1.2e-06 Score=64.58 Aligned_cols=63 Identities=13% Similarity=0.120 Sum_probs=48.5
Q ss_pred hc-ceeEEEeC-hhhHHHHhCCcc---------CceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 8 FL-MWLITLFQ-SQDVARDFGAAC---------TPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 8 ~~-~fpvL~D~-~q~va~a~gA~~---------TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
.+ +||+|.|. +++++++||+.. +|.+||||++| +|+|++..++... ...-..+.++|+++.
T Consensus 104 gl~~fplLsD~~~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG----~I~~~~~~~~~~~----~pd~~evl~~L~~l~ 175 (224)
T 3keb_A 104 GLPNIALLSTLRGRDFHKRYGVLITEYPLSGYTSPAIILADAAN----VVHYSERLANTRD----FFDFDAIEKLLQEGE 175 (224)
T ss_dssp CCTTCEEEESTTCTTHHHHTTCBCCSTTSTTCBCCEEEEECTTC----BEEEEEECSBTTC----CCCHHHHHHHHHHHH
T ss_pred CCCCceEEEcCCchHHHHHhCCccccccccCCccCEEEEEcCCC----EEEEEEecCCCCC----CCCHHHHHHHHHHhh
Confidence 45 69999998 699999999875 89999999999 8999998776531 112445666776665
Q ss_pred cC
Q 034345 77 SG 78 (97)
Q Consensus 77 aG 78 (97)
..
T Consensus 176 ~~ 177 (224)
T 3keb_A 176 QQ 177 (224)
T ss_dssp HH
T ss_pred hc
Confidence 43
No 42
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.35 E-value=5.6e-07 Score=58.82 Aligned_cols=56 Identities=13% Similarity=0.190 Sum_probs=42.9
Q ss_pred hccee-EEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 8 FLMWL-ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 8 ~~~fp-vL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
.++|| ++.|+.+++++.||...+|.+||+|++|+ +.-+|.|..+. ..+.+.|+.++
T Consensus 95 ~~~~~~~~~d~~~~~~~~~~v~~~P~~~~id~~G~--i~~~~~g~~~~-----------~~l~~~l~~~l 151 (156)
T 1kng_A 95 GNPFGRVGVDANGRASIEWGVYGVPETFVVGREGT--IVYKLVGPITP-----------DNLRSVLLPQM 151 (156)
T ss_dssp CCCCSEEEEETTSHHHHHTTCCSSCEEEEECTTSB--EEEEEESCCCH-----------HHHHHTHHHHH
T ss_pred CCCCceeeeCchhHHHHhcCcCccCeEEEEcCCCC--EEEEEeCCCCH-----------HHHHHHHHHHH
Confidence 46788 88999999999999999999999999994 34445665432 25666666655
No 43
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=98.35 E-value=4.1e-07 Score=60.09 Aligned_cols=57 Identities=16% Similarity=0.209 Sum_probs=45.6
Q ss_pred cc-eeEEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034345 9 LM-WLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (97)
Q Consensus 9 ~~-fpvL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG 78 (97)
++ ||++.|..+++++.||...+|++||||++|+ +.-+|.|.++ ...|+..|+.+++.
T Consensus 100 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~g~~~-----------~~~l~~~i~~~~~~ 157 (164)
T 2h30_A 100 YPKLPVVTDNGGTIAQNLNISVYPSWALIGKDGD--VQRIVKGSIN-----------EAQALALIRNPNAD 157 (164)
T ss_dssp CTTSCEEECTTCHHHHHTTCCSSSEEEEECTTSC--EEEEEESCCC-----------HHHHHHHHHCTTCC
T ss_pred CCcceEEEcCchHHHHHcCCCccceEEEECCCCc--EEEEEcCCCC-----------HHHHHHHHHHHHHH
Confidence 44 8899999999999999999999999999995 3444557543 34788888887753
No 44
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=98.35 E-value=9.8e-07 Score=56.89 Aligned_cols=56 Identities=16% Similarity=0.237 Sum_probs=46.5
Q ss_pred hhcceeEEEeC---hhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034345 7 LFLMWLITLFQ---SQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (97)
Q Consensus 7 ~~~~fpvL~D~---~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG 78 (97)
..++||++.|. .+.+++.||...+|.+||+|++| +++++.. +...|++.|+.+|+.
T Consensus 89 ~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G----~i~~~~~------------~~~~l~~~l~~ll~~ 147 (148)
T 3fkf_A 89 DTLSWDQVCDFTGLSSETAKQYAILTLPTNILLSPTG----KILARDI------------QGEALTGKLKELLKT 147 (148)
T ss_dssp TTCCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTS----BEEEESC------------CHHHHHHHHHHHC--
T ss_pred cCCCceEEEccCCcchHHHHhcCCCCcCEEEEECCCC----eEEEecC------------CHHHHHHHHHHHHcc
Confidence 35789999999 78999999999999999999999 6888764 245789999988764
No 45
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.35 E-value=1.1e-06 Score=57.74 Aligned_cols=54 Identities=20% Similarity=0.382 Sum_probs=46.2
Q ss_pred hcceeEEEeC---hhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 8 FLMWLITLFQ---SQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 8 ~~~fpvL~D~---~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
.++||++.|. +++++++||...+|++||||++| +++++.. +...|++.|+.+++
T Consensus 92 ~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G----~i~~~~~------------~~~~l~~~l~~ll~ 148 (150)
T 3fw2_A 92 TLDWEQVCDFGGLNSEVAKQYSIYKIPANILLSSDG----KILAKNL------------RGEELKKKIENIVE 148 (150)
T ss_dssp TCCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTS----BEEEESC------------CHHHHHHHHHHHHH
T ss_pred CCCceEEEcCcccchHHHHHcCCCccCeEEEECCCC----EEEEccC------------CHHHHHHHHHHHHh
Confidence 5789999999 77999999999999999999999 6888763 24478888888874
No 46
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.33 E-value=8.8e-07 Score=60.16 Aligned_cols=60 Identities=17% Similarity=0.023 Sum_probs=46.7
Q ss_pred ceeEEEeChhhHHHHhCCc----cCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCC
Q 034345 10 MWLITLFQSQDVARDFGAA----CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQP 80 (97)
Q Consensus 10 ~fpvL~D~~q~va~a~gA~----~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~ 80 (97)
.||++.|+++.+++.||.. .+|++||||++|+ ++-+|.|..+.. ...+.+.|+++++++.
T Consensus 120 ~~~~~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~--i~~~~~g~~~~~---------~~~l~~~l~~ll~~~a 183 (186)
T 1jfu_A 120 RLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGC--EIATIAGPAEWA---------SEDALKLIRAATGKAA 183 (186)
T ss_dssp TTCCEECTTCHHHHHHHTTTCCSSSSEEEEECTTSB--EEEEEESCCCTT---------SHHHHHHHHHHHC---
T ss_pred CCceEECCcchHHHHhccccccCCCCEEEEECCCCC--EEEEEecCCccC---------HHHHHHHHHHHhcccc
Confidence 5899999999999999986 8999999999995 455666764322 2378999999998753
No 47
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=98.32 E-value=1.3e-06 Score=58.95 Aligned_cols=43 Identities=14% Similarity=0.270 Sum_probs=37.0
Q ss_pred hc-ceeEEEeC-hhhHHHHhCCcc------CceEEEEecCCCCCeeEEEeeecCC
Q 034345 8 FL-MWLITLFQ-SQDVARDFGAAC------TPEFFLFKKDGRRPFQLVYHGQFDD 54 (97)
Q Consensus 8 ~~-~fpvL~D~-~q~va~a~gA~~------TPe~fvld~~g~~~~~l~Y~G~IDd 54 (97)
.+ +||++.|. +++++++||+.. +|+.||||++| +++|+....+
T Consensus 99 ~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G----~i~~~~~~~~ 149 (166)
T 3p7x_A 99 GLDNVITLSDHRDLSFGENYGVVMEELRLLARAVFVLDADN----KVVYKEIVSE 149 (166)
T ss_dssp TCSSCEEEECTTTCHHHHHHTCEETTTTEECCEEEEECTTC----BEEEEEECSB
T ss_pred CCCceEEccCCchhHHHHHhCCccccCCceeeEEEEECCCC----eEEEEEEcCC
Confidence 46 89999999 999999999985 99999999999 6888765443
No 48
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.32 E-value=1.4e-06 Score=57.73 Aligned_cols=60 Identities=12% Similarity=0.075 Sum_probs=44.1
Q ss_pred hcceeEEEeC--hhhHHHHhCCc----cCc--eEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 8 FLMWLITLFQ--SQDVARDFGAA----CTP--EFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 8 ~~~fpvL~D~--~q~va~a~gA~----~TP--e~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
.++||++.|. +++++++||.. .+| .+||||++|+ ++-+|.|.++.. .....+.++|+++.
T Consensus 92 ~~~~~~~~d~~~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~--i~~~~~g~~~~~-------~~~~~l~~~l~~l~ 159 (160)
T 1xvw_A 92 GFTFPLLSDFWPHGAVSQAYGVFNEQAGIANRGTFVVDRSGI--IRFAEMKQPGEV-------RDQRLWTDALAALT 159 (160)
T ss_dssp TCCSCEEECTTTTTHHHHHTTCEETTTTEECSEEEEECTTSB--EEEEEECCTTCC-------CCHHHHHHHHHHTC
T ss_pred CCCceEEecCCcChHHHHHcCCccccCCCeeeeEEEECCCCe--EEEEEecCCCCC-------CCHHHHHHHHHHhc
Confidence 5689999995 89999999998 888 9999999994 444555554332 13446666776654
No 49
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=98.31 E-value=5.9e-07 Score=57.59 Aligned_cols=43 Identities=19% Similarity=0.357 Sum_probs=37.4
Q ss_pred hcceeEEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeec
Q 034345 8 FLMWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQF 52 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~I 52 (97)
.++||++.|.++.+++.||...+|++||+|++|+ +.-+|.|..
T Consensus 93 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~g~~ 135 (145)
T 3erw_A 93 KLTFPIVLDSKGELMKEYHIITIPTSFLLNEKGE--IEKTKIGPM 135 (145)
T ss_dssp TCCSCEEECSSSHHHHHTTCCEESEEEEECTTCC--EEEEEESCC
T ss_pred CCceeEEEcCchhHHHhcCcCccCeEEEEcCCCc--EEEEEcCCc
Confidence 5789999999999999999999999999999995 445666654
No 50
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.30 E-value=9.2e-07 Score=60.50 Aligned_cols=44 Identities=23% Similarity=0.280 Sum_probs=35.8
Q ss_pred hccee-EEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecC
Q 034345 8 FLMWL-ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFD 53 (97)
Q Consensus 8 ~~~fp-vL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~ID 53 (97)
.++|| ++.|.++.+++.||...+|.+||||++|+ ++-+|.|.++
T Consensus 110 ~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~g~~~ 154 (176)
T 3kh7_A 110 HNPYLLSISDADGTLGLDLGVYGAPETYLIDKQGI--IRHKIVGVVD 154 (176)
T ss_dssp TCCCSEEEEETTCHHHHHHTCCSSCEEEEECTTCB--EEEEEESCCC
T ss_pred CCCCceEEECCcchHHHHcCCCCCCeEEEECCCCe--EEEEEcCCCC
Confidence 45677 68899999999999999999999999994 3445557653
No 51
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=98.29 E-value=9.9e-07 Score=57.54 Aligned_cols=58 Identities=10% Similarity=0.160 Sum_probs=45.5
Q ss_pred eeEEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034345 11 WLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (97)
Q Consensus 11 fpvL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v 81 (97)
++++.|..+++++.||...+|.+||+|++| +++++..-.. +...|++.|+.++++.+=
T Consensus 90 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G----~i~~~~~g~~---------~~~~l~~~l~~~~~~~~~ 147 (152)
T 2lja_A 90 IQLHMGTDRTFMDAYLINGIPRFILLDRDG----KIISANMTRP---------SDPKTAEKFNELLGLEGH 147 (152)
T ss_dssp EEEECSSCTHHHHHTTCCSSCCEEEECTTS----CEEESSCCCT---------TCHHHHHHHHHHHTCCSS
T ss_pred ceeecCcchhHHHHcCcCCCCEEEEECCCC----eEEEccCCCC---------CHHHHHHHHHHHhccccc
Confidence 468889999999999999999999999999 5666532111 233799999999988653
No 52
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.29 E-value=3.1e-06 Score=56.35 Aligned_cols=57 Identities=21% Similarity=0.320 Sum_probs=45.3
Q ss_pred hhcceeEEEeChhh---HHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034345 7 LFLMWLITLFQSQD---VARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (97)
Q Consensus 7 ~~~~fpvL~D~~q~---va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~ 79 (97)
..++||++.|.++. ++++||...+|.+||||++| +++++..-. ..+++.+..++.|.
T Consensus 88 ~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G----~i~~~~~g~------------~~~e~~~~~~~~~~ 147 (152)
T 2lrt_A 88 DNLPWVCVRDANGAYSSYISLYNVTNLPSVFLVNRNN----ELSARGENI------------KDLDEAIKKLLEGH 147 (152)
T ss_dssp TTCSSEEEECSSGGGCHHHHHHTCCSCSEEEEEETTT----EEEEETTTC------------SCHHHHHHHHHGGG
T ss_pred hCCCceEEECCCCcchHHHHHcCcccCceEEEECCCC----eEEEecCCH------------HHHHHHHHHHHhcc
Confidence 45899999999997 99999999999999999999 677654211 13677777777764
No 53
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.28 E-value=9.2e-07 Score=60.06 Aligned_cols=59 Identities=17% Similarity=0.116 Sum_probs=47.2
Q ss_pred hhcceeEEEeChhhHHHHhC---CccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034345 7 LFLMWLITLFQSQDVARDFG---AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (97)
Q Consensus 7 ~~~~fpvL~D~~q~va~a~g---A~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG 78 (97)
..++||++.|.++.+++.|| ...+|++||||++|+ ++-+|.|.+ +...|.+.|+.+|+.
T Consensus 121 ~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~g~~-----------~~~~l~~~l~~ll~~ 182 (183)
T 3lwa_A 121 NGLDYPSIYDPPFMTAASLGGVPASVIPTTIVLDKQHR--PAAVFLREV-----------TSKDVLDVALPLVDE 182 (183)
T ss_dssp TTCCSCEEECTTCGGGGGTTTCCTTCCSEEEEECTTSC--EEEEECSCC-----------CHHHHHHHHHHHHHC
T ss_pred cCCCccEEECCcchHHHHhccCCCCCCCeEEEECCCCc--EEEEEcCCC-----------CHHHHHHHHHHHHhc
Confidence 35789999999999999996 689999999999995 344455543 245899999998863
No 54
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.27 E-value=2.6e-06 Score=57.01 Aligned_cols=60 Identities=13% Similarity=0.177 Sum_probs=43.1
Q ss_pred ceeEEEe-ChhhHHHHhCCcc------CceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 10 MWLITLF-QSQDVARDFGAAC------TPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 10 ~fpvL~D-~~q~va~a~gA~~------TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
+||++.| .+++++++||... +|++||||++| +++|+..-.+.. . ......+.++|++|++
T Consensus 101 ~~~~~~d~~~~~~~~~~~v~~~~~g~~~p~~~lid~~G----~i~~~~~g~~~~--~--~~~~~~l~~~l~~llk 167 (167)
T 2jsy_A 101 KVETLSDHRDMSFGEAFGVYIKELRLLARSVFVLDENG----KVVYAEYVSEAT--N--HPNYEKPIEAAKALVK 167 (167)
T ss_dssp TEEEEEGGGTCHHHHHTTCBBTTTCSBCCEEEEECTTS----CEEEEEECSBTT--S--CCCSHHHHHHHHHHHC
T ss_pred CceEeeCCchhHHHHHhCCccccCCceeeEEEEEcCCC----cEEEEEecCCcC--C--CCCHHHHHHHHHHhhC
Confidence 8999999 8999999999887 59999999999 455554322111 0 1123467778888764
No 55
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.21 E-value=2.5e-06 Score=56.87 Aligned_cols=60 Identities=20% Similarity=0.228 Sum_probs=45.2
Q ss_pred cce---eEEEeChhhHHHHhC----------------CccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHH
Q 034345 9 LMW---LITLFQSQDVARDFG----------------AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIR 69 (97)
Q Consensus 9 ~~f---pvL~D~~q~va~a~g----------------A~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~ 69 (97)
++| |++.|.+++++++|+ ...+|++||||++|+ ++-+|.|..+. ....|.
T Consensus 96 ~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~--i~~~~~g~~~~---------~~~~l~ 164 (174)
T 1xzo_A 96 LSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGK--VLKDYNGVENT---------PYDDII 164 (174)
T ss_dssp CCGGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSE--EEEEEESSSSC---------CHHHHH
T ss_pred CCCcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCe--EEEEEcCCCCC---------CHHHHH
Confidence 456 999998889888875 467999999999994 44445676531 245799
Q ss_pred HHHHHHHcCC
Q 034345 70 LAIECVLSGQ 79 (97)
Q Consensus 70 ~Ai~alLaG~ 79 (97)
++|+++|+.+
T Consensus 165 ~~l~~ll~~k 174 (174)
T 1xzo_A 165 SDVKSASTLK 174 (174)
T ss_dssp HHHHHHTCCC
T ss_pred HHHHHHHhcC
Confidence 9999998753
No 56
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=98.19 E-value=3.2e-06 Score=59.66 Aligned_cols=57 Identities=11% Similarity=0.191 Sum_probs=43.1
Q ss_pred hc-ceeEEEeC-hhhHHHHhCCc---------cCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHH
Q 034345 8 FL-MWLITLFQ-SQDVARDFGAA---------CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECV 75 (97)
Q Consensus 8 ~~-~fpvL~D~-~q~va~a~gA~---------~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~al 75 (97)
.+ +||++.|. +++++++||+. .+|.+||||++| +++|+....+... ...++++|++|
T Consensus 132 ~~~~f~~l~D~~~~~~~~~ygv~~~~~~~~g~~~p~~~lID~~G----~I~~~~~~~~~~~-------~~~~~~~l~~L 199 (200)
T 3zrd_A 132 GLSNVITLSTLRGADFKQAYGVAITEGPLAGLTARAVVVLDGQD----NVIYSELVNEITT-------EPNYDAALAAL 199 (200)
T ss_dssp TCTTEEEEETTSCTHHHHHTTCEECSSTTTTSBCCEEEEECTTS----BEEEEEECSBTTS-------CCCHHHHHHHH
T ss_pred CCCCceEEecCchHHHHHHhCceeecccCCCccccEEEEECCCC----eEEEEEecCCccc-------CCCHHHHHHhh
Confidence 56 99999999 99999999987 479999999999 6888765443311 11366666654
No 57
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.19 E-value=2.1e-06 Score=55.49 Aligned_cols=53 Identities=9% Similarity=0.225 Sum_probs=42.3
Q ss_pred hcceeEEEeChhhHHH--HhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 8 FLMWLITLFQSQDVAR--DFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~--a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
.++||++.|.++.++. .||...+|++||||++| +++|++ .+...|++.|+.+.
T Consensus 86 ~~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G----~i~~~~------------~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 86 PQGWIVGWNKAGDIRTRQLYDIRATPTIYLLDGRK----RVILKD------------TSMEQLIDYLATQA 140 (142)
T ss_dssp CTTCEEEECTTCHHHHTTCSCCCSSSEEEEECTTC----BEEECS------------CCHHHHHHHHHC--
T ss_pred CCCcceeeCCccchhhHHHcCCCCCCeEEEECCCC----CEEecC------------CCHHHHHHHHHHHc
Confidence 4689999999999987 99999999999999999 688843 13446777776553
No 58
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=98.19 E-value=4.4e-06 Score=57.41 Aligned_cols=59 Identities=8% Similarity=0.089 Sum_probs=42.3
Q ss_pred hcceeEEEeChhhHHHHhCCcc------------CceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHH
Q 034345 8 FLMWLITLFQSQDVARDFGAAC------------TPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECV 75 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~~------------TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~al 75 (97)
.++||++.|.+++++++||+.. +|..||||++| +++|+= .+.. .......+.++|+++
T Consensus 107 ~~~f~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G----~I~~~~--~~~~----~~~~~~~il~~l~~l 176 (179)
T 3ixr_A 107 GFTFPLVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTH----RIVEAW--RQVK----VPGHAEEVLNKLKAH 176 (179)
T ss_dssp TCCSCEEECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTS----BEEEEE--CSCC----STTHHHHHHHHHHHH
T ss_pred CCceEEEECCchHHHHHcCCcccccccCcccCCcceEEEEECCCC----EEEEEE--cCCC----CCCCHHHHHHHHHHH
Confidence 6789999999999999999864 68899999999 566553 1111 112344666667665
Q ss_pred H
Q 034345 76 L 76 (97)
Q Consensus 76 L 76 (97)
.
T Consensus 177 ~ 177 (179)
T 3ixr_A 177 A 177 (179)
T ss_dssp H
T ss_pred h
Confidence 4
No 59
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=98.15 E-value=3.6e-06 Score=55.40 Aligned_cols=58 Identities=17% Similarity=0.335 Sum_probs=44.8
Q ss_pred hcceeEEEeChhhHHHHh------CCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034345 8 FLMWLITLFQSQDVARDF------GAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~------gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~ 79 (97)
.++||++.|.. ++++.| |...+|.+||||++|+ +.-+|.|.. +...+++.|+.+|+..
T Consensus 90 ~~~~~~~~~~~-~~~~~~~~~~~~~i~~~P~~~lid~~G~--i~~~~~g~~-----------~~~~l~~~l~~~l~~~ 153 (165)
T 3or5_A 90 GIIYPVMMATP-ELIRAFNGYIDGGITGIPTSFVIDASGN--VSGVIVGPR-----------SKADFDRIVKMALGAK 153 (165)
T ss_dssp TCCSCEEECCH-HHHHHHHTTSTTCSCSSSEEEEECTTSB--EEEEECSCC-----------CHHHHHHHHHHHHC--
T ss_pred CCCCceEecCH-HHHHHHhhhhccCCCCCCeEEEECCCCc--EEEEEcCCC-----------CHHHHHHHHHHHHhhh
Confidence 57899999987 899999 7899999999999994 334455643 2447889999998754
No 60
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.15 E-value=2.3e-06 Score=66.29 Aligned_cols=59 Identities=14% Similarity=0.151 Sum_probs=47.2
Q ss_pred hcceeEEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034345 8 FLMWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~ 79 (97)
.++||++.|.+++++++|+...+|.+||||++|+ ++-+|.|..+ ...|++.|+++|+..
T Consensus 143 ~l~fpv~~D~~~~l~~~ygV~~~Pt~~lID~~G~--Iv~~~~G~~~-----------~~~l~~~I~~lL~e~ 201 (352)
T 2hyx_A 143 GISYPIALDNNYATWTNYRNRYWPAEYLIDATGT--VRHIKFGEGD-----------YNVTETLVRQLLNDA 201 (352)
T ss_dssp TCCSCEEECTTSHHHHHTTCCEESEEEEECTTSB--EEEEEESBCC-----------HHHHHHHHHHHHHHH
T ss_pred CCCccEEeCCcHHHHHHcCCCccCEEEEEeCCCe--EEEEEcCCCC-----------HHHHHHHHHHHHhhc
Confidence 5789999999999999999999999999999995 4445556532 336888888887643
No 61
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.15 E-value=2.3e-06 Score=57.05 Aligned_cols=43 Identities=19% Similarity=0.203 Sum_probs=34.9
Q ss_pred hccee-EEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeec
Q 034345 8 FLMWL-ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQF 52 (97)
Q Consensus 8 ~~~fp-vL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~I 52 (97)
.++|| ++.|+.+++++.||...+|++||||++|+ +.-+|.|..
T Consensus 103 ~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~g~~ 146 (168)
T 2b1k_A 103 GNPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGI--IRYRHAGDL 146 (168)
T ss_dssp CCCCSEEEEETTCHHHHHHTCCSSSEEEEECTTSB--EEEEEESCC
T ss_pred CCCCceeeECcchHHHHHcCccccCEEEEECCCCe--EEEEEeCCC
Confidence 46777 67899999999999999999999999994 333455643
No 62
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.14 E-value=5.2e-06 Score=56.65 Aligned_cols=54 Identities=11% Similarity=0.212 Sum_probs=42.0
Q ss_pred ceeEEEeChhhHHHHhCCccC---------ceEEEEecCCCCCeeEEEeee---cCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 10 MWLITLFQSQDVARDFGAACT---------PEFFLFKKDGRRPFQLVYHGQ---FDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 10 ~fpvL~D~~q~va~a~gA~~T---------Pe~fvld~~g~~~~~l~Y~G~---IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
+||++.|.+++++++||...+ |..||||++| +++|+.. +.+. ..++++|+++.+
T Consensus 100 ~~~~l~D~~~~~~~~~gv~~~~~~~~g~~~p~~~lid~~G----~I~~~~~g~~~~~~----------~~~~~~l~~l~~ 165 (175)
T 1xvq_A 100 NVMPASAFRDSFGEDYGVTIADGPMAGLLARAIVVIGADG----NVAYTELVPEIAQE----------PNYEAALAALGA 165 (175)
T ss_dssp CEEEEECTTSSHHHHTTCBBCSSTTTTSBCSEEEEECTTS----BEEEEEECSBTTCC----------CCHHHHHHHHHH
T ss_pred CceEeeCCHHHHHHHhCCcccccccCCcccceEEEECCCC----eEEEEEECCCcCCC----------CCHHHHHHHHHh
Confidence 899999999999999999877 9999999999 5666543 2222 147777777764
No 63
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=98.13 E-value=9.1e-06 Score=54.59 Aligned_cols=40 Identities=15% Similarity=0.189 Sum_probs=33.7
Q ss_pred hc-ceeEEEe-ChhhHHHHhCCcc------CceEEEEecCCCCCeeEEEeee
Q 034345 8 FL-MWLITLF-QSQDVARDFGAAC------TPEFFLFKKDGRRPFQLVYHGQ 51 (97)
Q Consensus 8 ~~-~fpvL~D-~~q~va~a~gA~~------TPe~fvld~~g~~~~~l~Y~G~ 51 (97)
.+ +||++.| .+++++++||+.. +|..||||++| +++|+..
T Consensus 96 ~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G----~i~~~~~ 143 (163)
T 1psq_A 96 GLDNAIMLSDYFDHSFGRDYALLINEWHLLARAVFVLDTDN----TIRYVEY 143 (163)
T ss_dssp TCTTSEEEECTTTCHHHHHHTCBCTTTCSBCCEEEEECTTC----BEEEEEE
T ss_pred CCCCcEEecCCchhHHHHHhCCccccCCceEEEEEEEcCCC----eEEEEEe
Confidence 46 8999999 8999999999874 59999999999 5666543
No 64
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=98.11 E-value=6.4e-06 Score=55.62 Aligned_cols=60 Identities=10% Similarity=0.223 Sum_probs=40.4
Q ss_pred hc-ceeEEEe-ChhhHHHHhCCcc---------CceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 8 FL-MWLITLF-QSQDVARDFGAAC---------TPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 8 ~~-~fpvL~D-~~q~va~a~gA~~---------TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
.+ +||++.| +++++ ++||+.. +|++||||++| +++|+..-.+.. . ......+.++|++||
T Consensus 101 ~~~~~~~l~D~~~~~~-~~~gv~~~~~~~~g~~~p~~~liD~~G----~i~~~~~~~~~~--~--~~~~~~ll~~l~~ll 171 (171)
T 2yzh_A 101 NIQNVTVASDFRYRDM-EKYGVLIGEGALKGILARAVFIIDKEG----KVAYVQLVPEIT--E--EPNYDEVVNKVKELI 171 (171)
T ss_dssp TCCSSEEEECTTTCGG-GGGTCBBCSSTTTTSBCCEEEEECTTS----BEEEEEECSBTT--S--CCCCHHHHHHHHHC-
T ss_pred CCCCeEEeecCccCcH-HHhCCEecccccCCceeeEEEEEcCCC----eEEEEEeCCCcC--C--CCCHHHHHHHHHhhC
Confidence 46 8999999 88999 9999863 79999999999 465554321110 0 011235777777654
No 65
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.08 E-value=1.7e-06 Score=57.75 Aligned_cols=38 Identities=26% Similarity=0.412 Sum_probs=33.3
Q ss_pred hcceeEEEeChhhHHHHhCCccCc------eEEEEecCCCCCeeEEEee
Q 034345 8 FLMWLITLFQSQDVARDFGAACTP------EFFLFKKDGRRPFQLVYHG 50 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~~TP------e~fvld~~g~~~~~l~Y~G 50 (97)
.++||++.|.+++++++||+..+| +.||| ++| +++|+-
T Consensus 90 ~~~~~~l~D~~~~~~~~~gv~~~p~~g~~~~~~li-~~G----~i~~~~ 133 (159)
T 2a4v_A 90 NLPYHLLSDPKREFIGLLGAKKTPLSGSIRSHFIF-VDG----KLKFKR 133 (159)
T ss_dssp TCSSEEEECTTCHHHHHHTCBSSSSSCBCCEEEEE-ETT----EEEEEE
T ss_pred CCCceEEECCccHHHHHhCCcccccCCccceEEEE-cCC----EEEEEE
Confidence 578999999999999999999998 89999 999 566553
No 66
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=98.06 E-value=6.6e-06 Score=55.49 Aligned_cols=40 Identities=3% Similarity=0.009 Sum_probs=33.8
Q ss_pred hc-ceeEEEeC-hhhHHHHhCCcc---------CceEEEEecCCCCCeeEEEeee
Q 034345 8 FL-MWLITLFQ-SQDVARDFGAAC---------TPEFFLFKKDGRRPFQLVYHGQ 51 (97)
Q Consensus 8 ~~-~fpvL~D~-~q~va~a~gA~~---------TPe~fvld~~g~~~~~l~Y~G~ 51 (97)
.+ +||++.|. +++++++||+.. +|..||||++| +++|+..
T Consensus 97 ~~~~~~~l~D~~~~~~~~~~gv~~~~~~~~g~~~p~~~liD~~G----~i~~~~~ 147 (165)
T 1q98_A 97 GIENAKTVSTFRNHALHSQLGVDIQTGPLAGLTSRAVIVLDEQN----NVLHSQL 147 (165)
T ss_dssp TCTTEEEEECTTCTHHHHHTTCEECSSTTTTSBCCEEEEECTTS----BEEEEEE
T ss_pred CCCceEEeeccccchHHHHhCceecccccCCccceeEEEEcCCC----EEEEEEe
Confidence 46 79999998 899999999864 69999999999 5666654
No 67
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=98.05 E-value=1.6e-05 Score=55.39 Aligned_cols=39 Identities=8% Similarity=-0.058 Sum_probs=33.1
Q ss_pred eeEEEeChhhHHHHhCCc-------------cCceEEEEecCCCCCeeEEEeeecCC
Q 034345 11 WLITLFQSQDVARDFGAA-------------CTPEFFLFKKDGRRPFQLVYHGQFDD 54 (97)
Q Consensus 11 fpvL~D~~q~va~a~gA~-------------~TPe~fvld~~g~~~~~l~Y~G~IDd 54 (97)
||+|.|++++++++||+. ..|.+|||| +| +++|.-.-++
T Consensus 106 fp~l~D~~~~va~~yGv~~~~~~~~~~g~~~~~r~tfvID-dG----~I~~~~v~~~ 157 (173)
T 3mng_A 106 VRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ-DG----IVKALNVEPD 157 (173)
T ss_dssp CEEEECTTCHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE-TT----EEEEEEECTT
T ss_pred eEEEECCChHHHHHhCCCcccccccccCCcceEEEEEEEE-CC----EEEEEEEeCC
Confidence 999999999999999986 349999999 99 7888754333
No 68
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=98.03 E-value=4.1e-06 Score=63.82 Aligned_cols=61 Identities=10% Similarity=0.022 Sum_probs=43.4
Q ss_pred hhcceeEEEeChhhHHHHhCC----ccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 7 LFLMWLITLFQSQDVARDFGA----ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 7 ~~~~fpvL~D~~q~va~a~gA----~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
..++||+|.|++++++++||+ ...|.+||||++|. ++-.|++- .. .-....+-++|+++..
T Consensus 75 ~~l~fp~l~D~~~~v~~~ygv~~~~~~~r~tfiId~~G~--i~~~~~~v---~~-----~~h~~~~l~~~~~~~~ 139 (322)
T 4eo3_A 75 NDLKVTLLSDPEGILHEFFNVLENGKTVRSTFLIDRWGF--VRKEWRRV---KV-----EGHVQEVKEALDRLIE 139 (322)
T ss_dssp HTCCSEEEECTTCHHHHHTTCEETTEECCEEEEECTTSB--EEEEEESC---CS-----TTHHHHHHHHHHHHHH
T ss_pred hCCceEEEEcCchHHHHhcCCCCCCcCccEEEEECCCCE--EEEEEeCC---Cc-----cccHHHHHHHHhhhch
Confidence 358999999999999999998 46789999999994 33345431 11 1123456667777764
No 69
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=98.00 E-value=7.5e-06 Score=55.32 Aligned_cols=36 Identities=11% Similarity=-0.045 Sum_probs=32.8
Q ss_pred ceeEEEeChhhHHHHhCCc-----------cCceEEEEecCCCCCeeEEEee
Q 034345 10 MWLITLFQSQDVARDFGAA-----------CTPEFFLFKKDGRRPFQLVYHG 50 (97)
Q Consensus 10 ~fpvL~D~~q~va~a~gA~-----------~TPe~fvld~~g~~~~~l~Y~G 50 (97)
+||+|.|++++++++||+. .+|++|||| +| +++|+.
T Consensus 97 ~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~~~vid-~G----~i~~~~ 143 (162)
T 1tp9_A 97 HVKFLADGSATYTHALGLELDLQEKGLGTRSRRFALLVD-DL----KVKAAN 143 (162)
T ss_dssp SEEEEECTTSHHHHHTTCEEEETTTTSEEEECCEEEEEE-TT----EEEEEE
T ss_pred CeEEEECCCchHHHHcCcccccccCCCCccceeEEEEEE-CC----EEEEEE
Confidence 7999999999999999987 389999999 99 788876
No 70
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=97.99 E-value=3.8e-06 Score=55.36 Aligned_cols=57 Identities=18% Similarity=0.196 Sum_probs=43.1
Q ss_pred hcceeEE---EeChhhHHHHhCCccCc---------------eEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHH
Q 034345 8 FLMWLIT---LFQSQDVARDFGAACTP---------------EFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIR 69 (97)
Q Consensus 8 ~~~fpvL---~D~~q~va~a~gA~~TP---------------e~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~ 69 (97)
.++||+| .|..++++++||...+| .+||||++|+ ++-+|.|.. +...|.
T Consensus 87 ~~~~~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~--i~~~~~g~~-----------~~~~l~ 153 (164)
T 2ggt_A 87 SPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGE--FLDYFGQNK-----------RKGEIA 153 (164)
T ss_dssp CSSCEEEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSC--EEEEEETTC-----------CHHHHH
T ss_pred CCCeEEEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCe--EEEEeCCCC-----------CHHHHH
Confidence 4678888 46777899999999999 8999999995 344444432 234788
Q ss_pred HHHHHHHc
Q 034345 70 LAIECVLS 77 (97)
Q Consensus 70 ~Ai~alLa 77 (97)
++|+++|+
T Consensus 154 ~~l~~ll~ 161 (164)
T 2ggt_A 154 ASIATHMR 161 (164)
T ss_dssp HHHHHHHG
T ss_pred HHHHHHHH
Confidence 89998875
No 71
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=97.98 E-value=6.6e-06 Score=52.89 Aligned_cols=35 Identities=14% Similarity=0.352 Sum_probs=32.1
Q ss_pred eeEEEeChhh--HHHHhCCccCceEEEEecCCCCCeeEEEe
Q 034345 11 WLITLFQSQD--VARDFGAACTPEFFLFKKDGRRPFQLVYH 49 (97)
Q Consensus 11 fpvL~D~~q~--va~a~gA~~TPe~fvld~~g~~~~~l~Y~ 49 (97)
||++.|.++. +++.||...+|++||+|++| +++++
T Consensus 91 ~~~~~d~~~~~~~~~~~~i~~~P~~~lid~~G----~i~~~ 127 (148)
T 3hcz_A 91 WLNVRDSKNHTDFKITYDIYATPVLYVLDKNK----VIIAK 127 (148)
T ss_dssp SEEEECTTCCCCHHHHHCCCSSCEEEEECTTC----BEEEE
T ss_pred ceEEeccccchhHHHhcCcCCCCEEEEECCCC----cEEEe
Confidence 9999999998 99999999999999999999 56655
No 72
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=97.97 E-value=2e-05 Score=54.12 Aligned_cols=38 Identities=5% Similarity=-0.090 Sum_probs=33.9
Q ss_pred hcc--eeEEEeChhhHHHHhCCccC-----------ceEEEEecCCCCCeeEEEee
Q 034345 8 FLM--WLITLFQSQDVARDFGAACT-----------PEFFLFKKDGRRPFQLVYHG 50 (97)
Q Consensus 8 ~~~--fpvL~D~~q~va~a~gA~~T-----------Pe~fvld~~g~~~~~l~Y~G 50 (97)
.++ ||+|.|++++++++||+..+ |.+||| ++| +++|+.
T Consensus 89 ~~~~~fp~l~D~~~~~~~~~gv~~~~~~~~g~~~~~p~t~lI-~~G----~I~~~~ 139 (167)
T 2wfc_A 89 GADDKVQMLADPGGAFTKAVDMELDLSAVLGNVRSKRYSLVI-EDG----VVTKVN 139 (167)
T ss_dssp TCTTTSEEEECTTSHHHHHTTCEECCHHHHSSCEECCEEEEE-ETT----EEEEEE
T ss_pred CCCcceEEEECCCCcHHHHcCCccccccccCcccceEEEEEE-eCC----EEEEEE
Confidence 456 99999999999999998876 999999 999 788884
No 73
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=97.88 E-value=7.1e-06 Score=54.26 Aligned_cols=59 Identities=17% Similarity=0.070 Sum_probs=41.3
Q ss_pred hcceeEEE--eChhhHHH-Hh--------C-----CccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHH
Q 034345 8 FLMWLITL--FQSQDVAR-DF--------G-----AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLA 71 (97)
Q Consensus 8 ~~~fpvL~--D~~q~va~-a~--------g-----A~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~A 71 (97)
.++||++. |.++.++. .| | ...+|+.||||++|+ ++-+|.|..+. ..|+++
T Consensus 95 ~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~--i~~~~~g~~~~-----------~~l~~~ 161 (169)
T 2v1m_A 95 GVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQ--PVKRYSPTTAP-----------YDIEGD 161 (169)
T ss_dssp CCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSC--EEEEECTTSCG-----------GGGHHH
T ss_pred CCCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCC--EEEEcCCCCCH-----------HHHHHH
Confidence 57899995 88877653 34 5 334689999999995 44445564332 268889
Q ss_pred HHHHHcCC
Q 034345 72 IECVLSGQ 79 (97)
Q Consensus 72 i~alLaG~ 79 (97)
|+++|+.+
T Consensus 162 i~~ll~~k 169 (169)
T 2v1m_A 162 IMELLEKK 169 (169)
T ss_dssp HHHHHHCC
T ss_pred HHHHhccC
Confidence 99998754
No 74
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=97.88 E-value=1.7e-05 Score=52.57 Aligned_cols=58 Identities=12% Similarity=0.154 Sum_probs=43.2
Q ss_pred hcceeEEEeCh---hhHHHHhCCccCc---------------eEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHH
Q 034345 8 FLMWLITLFQS---QDVARDFGAACTP---------------EFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIR 69 (97)
Q Consensus 8 ~~~fpvL~D~~---q~va~a~gA~~TP---------------e~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~ 69 (97)
.++||+|.|.. +.++++||...+| .+||||++|+ ++-+|.|..+ ...|.
T Consensus 90 ~~~~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~--i~~~~~g~~~-----------~~~l~ 156 (171)
T 2rli_A 90 HPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGL--FTDYYGRSRS-----------AEQIS 156 (171)
T ss_dssp CTTCCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSC--EEEEEESSCC-----------HHHHH
T ss_pred CCCeEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCe--EEEEECCCCC-----------HHHHH
Confidence 35788888643 5799999998887 8999999995 4445555432 34788
Q ss_pred HHHHHHHcC
Q 034345 70 LAIECVLSG 78 (97)
Q Consensus 70 ~Ai~alLaG 78 (97)
+.|+++++.
T Consensus 157 ~~l~~ll~~ 165 (171)
T 2rli_A 157 DSVRRHMAA 165 (171)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888888864
No 75
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=97.10 E-value=1.8e-06 Score=57.07 Aligned_cols=58 Identities=10% Similarity=0.145 Sum_probs=42.0
Q ss_pred hcceeEEEeChhhHHHHhCC--ccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034345 8 FLMWLITLFQSQDVARDFGA--ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA--~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~ 79 (97)
.++||++.|++++++++||. ..+|++||||++| +++++..-- + ...+++.|+++..+.
T Consensus 91 ~~~~~~~~d~~~~~~~~~~~~~~~~P~~~lid~~G----~i~~~~~g~-~---------~~~l~~~l~~l~~~~ 150 (159)
T 2ls5_A 91 GVTYPLGLDPGADIFAKYALRDAGITRNVLIDREG----KIVKLTRLY-N---------EEEFASLVQQINEML 150 (159)
Confidence 56899999999999999995 4599999999999 455543211 1 114666666665553
No 76
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=97.82 E-value=1e-05 Score=53.62 Aligned_cols=57 Identities=21% Similarity=0.351 Sum_probs=41.6
Q ss_pred hcceeEEEeCh---hhHHHHhCC---------------ccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHH
Q 034345 8 FLMWLITLFQS---QDVARDFGA---------------ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIR 69 (97)
Q Consensus 8 ~~~fpvL~D~~---q~va~a~gA---------------~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~ 69 (97)
.++||++.|+. ++++++||+ ..+|++|||| +|+ ++-+|.|..+. +...|.
T Consensus 98 ~~~~~~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~--i~~~~~g~~~~---------~~~~l~ 165 (172)
T 2k6v_A 98 HPSFLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGR--LVLLYSPDKAE---------ATDRVV 165 (172)
T ss_dssp CTTEEEECCCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTE--EEEEECHHHHT---------CHHHHH
T ss_pred CCCcEEEeCCHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCE--EEEEECCCCCC---------CHHHHH
Confidence 46899999998 689999985 4789999999 994 44455565411 234677
Q ss_pred HHHHHHH
Q 034345 70 LAIECVL 76 (97)
Q Consensus 70 ~Ai~alL 76 (97)
+.|+++|
T Consensus 166 ~~l~~ll 172 (172)
T 2k6v_A 166 ADLQALL 172 (172)
T ss_dssp HHHHHCC
T ss_pred HHHHHhC
Confidence 7777654
No 77
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=97.73 E-value=5.1e-05 Score=55.72 Aligned_cols=77 Identities=13% Similarity=0.139 Sum_probs=42.6
Q ss_pred hcceeEEEeChhhHHHHhCCccC------ceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034345 8 FLMWLITLFQSQDVARDFGAACT------PEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~~T------Pe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v 81 (97)
.++||+|-|++++|+++||+-.. -.+||||++| +|+|.=--+... .....++-++|++|---+.-
T Consensus 119 ~l~fpllsD~~~~va~~yGv~~~~~g~~~R~tFiIDp~g----~Ir~~~~~~~~~-----gr~~~EvLr~l~aLQ~~~~~ 189 (219)
T 3tue_A 119 TMAIPILADKTKNIARSYGVLEESQGVAYRGLFIIDPHG----MLRQITVNDMPV-----GRSVEEVLRLLEAFQFVEKH 189 (219)
T ss_dssp SCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTS----BEEEEEEECTTC-----CCCHHHHHHHHHHHHHHHHC
T ss_pred ccccccccCcccHHHHHcCCcccCCCeeEEEEEEECCCC----eEEEEEEecCCC-----CCCHHHHHHHHHHhhhHHhc
Confidence 57999999999999999998543 4689999999 576653212221 11234555667776532111
Q ss_pred CCCCCCceeecCCC
Q 034345 82 SSNQKPSIKWHPQT 95 (97)
Q Consensus 82 ~~~~t~~IKw~~~~ 95 (97)
. ..-+.+|++|+
T Consensus 190 ~--~~~Pa~W~~G~ 201 (219)
T 3tue_A 190 G--EVCPANWKKGD 201 (219)
T ss_dssp --------------
T ss_pred C--CCcCCCCCCCC
Confidence 1 11237787764
No 78
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=97.71 E-value=2.6e-05 Score=50.61 Aligned_cols=40 Identities=10% Similarity=0.184 Sum_probs=35.3
Q ss_pred hcceeEEEeChhh--HHHHhCCccCceEEEEecCCCCCeeEEEeee
Q 034345 8 FLMWLITLFQSQD--VARDFGAACTPEFFLFKKDGRRPFQLVYHGQ 51 (97)
Q Consensus 8 ~~~fpvL~D~~q~--va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~ 51 (97)
.++||.+.|.++. +++.|+...+|++||||++| +++|++.
T Consensus 90 ~~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G----~i~~~~~ 131 (142)
T 3eur_A 90 AKEWTNGYDKELVIKNKNLYDLRAIPTLYLLDKNK----TVLLKDA 131 (142)
T ss_dssp CTTSEEEECTTCHHHHTTCSCCTTCSEEEEECTTC----BEEEEEE
T ss_pred ccccccccCccchhhhhhhcCCCcCCeEEEECCCC----cEEecCC
Confidence 3579999999876 78999999999999999999 7888874
No 79
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=97.71 E-value=8.5e-06 Score=56.12 Aligned_cols=61 Identities=15% Similarity=0.093 Sum_probs=38.4
Q ss_pred hcceeEEE--eChhhHHH------------HhCCccCc---eEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHH
Q 034345 8 FLMWLITL--FQSQDVAR------------DFGAACTP---EFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRL 70 (97)
Q Consensus 8 ~~~fpvL~--D~~q~va~------------a~gA~~TP---e~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~ 70 (97)
.++||++. |.++..+. .||....| +.||||++|+ ++-+|.|.. +...|++
T Consensus 110 ~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~--i~~~~~g~~-----------~~~~l~~ 176 (187)
T 3dwv_A 110 KAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGV--PVERFSPGA-----------SVKDIEE 176 (187)
T ss_dssp CCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSC--EEEEECTTC-----------CHHHHHH
T ss_pred CCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCC--EEEEECCCC-----------CHHHHHH
Confidence 67899985 77766552 23555667 9999999994 334444432 2347999
Q ss_pred HHHHHHcCCCC
Q 034345 71 AIECVLSGQPV 81 (97)
Q Consensus 71 Ai~alLaG~~v 81 (97)
.|+.+|++.++
T Consensus 177 ~i~~lL~~~~~ 187 (187)
T 3dwv_A 177 KLIPLLGSARL 187 (187)
T ss_dssp HHHHHC-----
T ss_pred HHHHHHhcCCC
Confidence 99999988653
No 80
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=97.69 E-value=0.00011 Score=53.86 Aligned_cols=60 Identities=12% Similarity=0.133 Sum_probs=44.0
Q ss_pred hcceeEEEeChhhHHHHhCCc------cCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 8 FLMWLITLFQSQDVARDFGAA------CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 8 ~~~fpvL~D~~q~va~a~gA~------~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
.++||+|.|++++++++||.- ..+.+||||++| +|+|.= +.+... .....++-++|++|-
T Consensus 115 ~l~fpllsD~~~~vak~YGv~~~~~g~~~R~tFiID~~G----~Ir~~~-v~~~~~----grn~dEiLr~l~AlQ 180 (216)
T 3sbc_A 115 PINIPLLADTNHSLSRDYGVLIEEEGVALRGLFIIDPKG----VIRHIT-INDLPV----GRNVDEALRLVEAFQ 180 (216)
T ss_dssp SCSSCEEECTTSHHHHHHTCEETTTTEECEEEEEECTTS----BEEEEE-EECTTB----CCCHHHHHHHHHHHH
T ss_pred CcccceEeCCCCHHHHHcCCeeccCCceeeEEEEECCCC----eEEEEE-EcCCCC----CCCHHHHHHHHHHhh
Confidence 479999999999999999974 457899999999 788863 333311 113445666777765
No 81
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=97.69 E-value=7.5e-05 Score=52.42 Aligned_cols=41 Identities=12% Similarity=-0.043 Sum_probs=33.3
Q ss_pred hcc--eeEEEeChhhHHHHhCCcc-----------CceEEEEecCCCCCeeEEEeeecC
Q 034345 8 FLM--WLITLFQSQDVARDFGAAC-----------TPEFFLFKKDGRRPFQLVYHGQFD 53 (97)
Q Consensus 8 ~~~--fpvL~D~~q~va~a~gA~~-----------TPe~fvld~~g~~~~~l~Y~G~ID 53 (97)
.++ ||+|.|++++++++||+.. .|..|||| +| +++|+-.-+
T Consensus 114 ~~~~~fp~l~D~~~~va~~yGv~~~~~~~g~g~~~~r~tfiId-dG----~I~~~~~~~ 167 (184)
T 3uma_A 114 GGMGKIHFLSDWNAAFTKAIGMEIDLSAGTLGIRSKRYSMLVE-DG----VVKALNIEE 167 (184)
T ss_dssp TCTTTSEEEECTTCHHHHHTTCEEEEGGGTCEEEECCEEEEEE-TT----EEEEEEECS
T ss_pred CCCCceEEEEcCchHHHHHcCCceeccccCCcccceeEEEEEC-CC----EEEEEEEeC
Confidence 456 9999999999999999863 47899996 88 677775433
No 82
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=97.59 E-value=6.8e-05 Score=48.64 Aligned_cols=39 Identities=10% Similarity=0.059 Sum_probs=33.8
Q ss_pred hcce-eEEEeCh---hhHHHHhCCccCceEEEEecCCCCCeeEEEee
Q 034345 8 FLMW-LITLFQS---QDVARDFGAACTPEFFLFKKDGRRPFQLVYHG 50 (97)
Q Consensus 8 ~~~f-pvL~D~~---q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G 50 (97)
.++| +++.|.. +++++.||...+|+.||||++| ++++++
T Consensus 88 ~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G----~i~~~~ 130 (143)
T 4fo5_A 88 KLDLSTQFHEGLGKESELYKKYDLRKGFKNFLINDEG----VIIAAN 130 (143)
T ss_dssp TCCGGGEEECTTGGGSHHHHHTTGGGCCCEEEECTTS----BEEEES
T ss_pred CCCCceeeecccccchHHHHHcCCCCCCcEEEECCCC----EEEEcc
Confidence 4677 7888884 6899999999999999999999 788875
No 83
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=97.57 E-value=0.00014 Score=47.25 Aligned_cols=55 Identities=18% Similarity=0.304 Sum_probs=44.4
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCC
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVSS 83 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v~~ 83 (97)
.|+..++++.||...+|+++++|++|+ .++|.|.++ ...|++.|+.++....+..
T Consensus 78 ~~~~~~l~~~~~v~~~Pt~~~~~~~G~---~~~~~G~~~-----------~~~l~~~l~~~~~~~~~~~ 132 (136)
T 2l5l_A 78 TEKEQELAGAFGIRSIPSILFIPMEGK---PEMAQGAMP-----------KASFKKAIDEFLLKKEGHH 132 (136)
T ss_dssp TTTCHHHHHHTTCCSSCEEEEECSSSC---CEEEESCCC-----------HHHHHHHHHHHHTSCTTSS
T ss_pred CCCCHHHHHHcCCCCCCEEEEECCCCc---EEEEeCCCC-----------HHHHHHHHHHHhhccCCCC
Confidence 466778999999999999999999996 558888653 3479999999887765543
No 84
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=97.57 E-value=0.00012 Score=46.65 Aligned_cols=55 Identities=16% Similarity=0.207 Sum_probs=42.5
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCCC
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVS 82 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v~ 82 (97)
.|+..++++.||...+|+++++|++|+ ..-+|.|..+ ...|.+.|+.++...+..
T Consensus 68 ~d~~~~~~~~~~v~~~Pt~~~~~~~G~--~~~~~~G~~~-----------~~~l~~~l~~~~~~~~~~ 122 (126)
T 2l57_A 68 EEKNIDLAYKYDANIVPTTVFLDKEGN--KFYVHQGLMR-----------KNNIETILNSLGVKEGHH 122 (126)
T ss_dssp SSHHHHHHHHTTCCSSSEEEEECTTCC--EEEEEESCCC-----------HHHHHHHHHHHCCCCCCC
T ss_pred CCchHHHHHHcCCcceeEEEEECCCCC--EEEEecCCCC-----------HHHHHHHHHHHhcccccc
Confidence 467789999999999999999999995 3445667543 347899998887766543
No 85
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=97.57 E-value=3.3e-05 Score=51.01 Aligned_cols=58 Identities=19% Similarity=0.133 Sum_probs=40.6
Q ss_pred hcceeEE--EeChhhHHH---------HhCC--ccCc---eEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHH
Q 034345 8 FLMWLIT--LFQSQDVAR---------DFGA--ACTP---EFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLA 71 (97)
Q Consensus 8 ~~~fpvL--~D~~q~va~---------a~gA--~~TP---e~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~A 71 (97)
.++||++ .|.++.++. .+|. ..+| +.||||++|+ ++-+|.|..+. ..|++.
T Consensus 96 ~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~--i~~~~~g~~~~-----------~~l~~~ 162 (170)
T 2p5q_A 96 KSEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQ--VVDRYYPTTSP-----------LSLERD 162 (170)
T ss_dssp CCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSC--EEEEECTTSCG-----------GGGHHH
T ss_pred CCCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCC--EEEeeCCCCCH-----------HHHHHH
Confidence 5789999 788877652 2366 6778 9999999995 34445554322 268888
Q ss_pred HHHHHcC
Q 034345 72 IECVLSG 78 (97)
Q Consensus 72 i~alLaG 78 (97)
|+.+|+.
T Consensus 163 i~~ll~~ 169 (170)
T 2p5q_A 163 IKQLLEI 169 (170)
T ss_dssp HHHHTTC
T ss_pred HHHHhhc
Confidence 9888763
No 86
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=97.54 E-value=0.00015 Score=49.76 Aligned_cols=38 Identities=5% Similarity=-0.202 Sum_probs=31.8
Q ss_pred cceeEEEeChhhHHHHhCCcc-----------CceEEEEecCCCCCeeEEEeee
Q 034345 9 LMWLITLFQSQDVARDFGAAC-----------TPEFFLFKKDGRRPFQLVYHGQ 51 (97)
Q Consensus 9 ~~fpvL~D~~q~va~a~gA~~-----------TPe~fvld~~g~~~~~l~Y~G~ 51 (97)
++||+|.|++++++++||+.. .|..|+|| +| +++|+-.
T Consensus 104 ~~fp~l~D~~~~~~~~ygv~~~~~~~~~g~~~~~~t~~I~-~G----~I~~~~~ 152 (171)
T 2pwj_A 104 DAIEFYGDFDGSFHKSLELTTDLSAGLLGIRSERWSAYVV-DG----KVKALNV 152 (171)
T ss_dssp TTSEEEECTTCHHHHHHTCEEECTTTTCCEEECCEEEEEE-TT----EEEEEEE
T ss_pred CceEEEECCccHHHHHhCCccccccccCCcccceeEEEEE-CC----EEEEEEe
Confidence 479999999999999999864 46799999 88 6777643
No 87
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=97.50 E-value=0.0001 Score=47.69 Aligned_cols=53 Identities=23% Similarity=0.400 Sum_probs=42.3
Q ss_pred eEEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034345 12 LITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (97)
Q Consensus 12 pvL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG 78 (97)
.+-.|...++++.||...+|++++++++|+ .++|.|.++ ...|.+.|+.+|+.
T Consensus 88 ~v~~~~~~~~~~~~~v~~~Pt~~~~~~~g~---~~~~~G~~~-----------~~~l~~~l~~~l~k 140 (141)
T 3hxs_A 88 KVNVDKEPELARDFGIQSIPTIWFVPMKGE---PQVNMGALS-----------KEQLKGYIDKVLLK 140 (141)
T ss_dssp EEETTTCHHHHHHTTCCSSSEEEEECSSSC---CEEEESCCC-----------HHHHHHHHHHTTC-
T ss_pred EEECCCCHHHHHHcCCCCcCEEEEEeCCCC---EEEEeCCCC-----------HHHHHHHHHHHHcc
Confidence 345677889999999999999999999996 568888653 33788888888753
No 88
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=97.49 E-value=4.9e-05 Score=51.07 Aligned_cols=58 Identities=19% Similarity=0.138 Sum_probs=40.0
Q ss_pred hcceeEEEeCh--hhH---------HHHhCCccCc------eEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHH
Q 034345 8 FLMWLITLFQS--QDV---------ARDFGAACTP------EFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRL 70 (97)
Q Consensus 8 ~~~fpvL~D~~--q~v---------a~a~gA~~TP------e~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~ 70 (97)
.++||++.|.+ +.. .+.||...+| ..||||++|+ ++-+|.|.++ ...|++
T Consensus 95 ~~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~--i~~~~~g~~~-----------~~~l~~ 161 (171)
T 3cmi_A 95 GVTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGK--VYERYSSLTK-----------PSSLSE 161 (171)
T ss_dssp CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSC--EEEEECTTSC-----------GGGGHH
T ss_pred CCCceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCC--EEEEeCCCCC-----------HHHHHH
Confidence 57899998643 332 1457888999 9999999994 3444445432 226888
Q ss_pred HHHHHHcC
Q 034345 71 AIECVLSG 78 (97)
Q Consensus 71 Ai~alLaG 78 (97)
.|+++|+.
T Consensus 162 ~i~~ll~~ 169 (171)
T 3cmi_A 162 TIEELLKE 169 (171)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHh
Confidence 99988863
No 89
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=97.49 E-value=3.8e-05 Score=52.80 Aligned_cols=59 Identities=19% Similarity=0.102 Sum_probs=42.2
Q ss_pred hcceeEEE--eChhhHHH---------HhCCccCc------eEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHH
Q 034345 8 FLMWLITL--FQSQDVAR---------DFGAACTP------EFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRL 70 (97)
Q Consensus 8 ~~~fpvL~--D~~q~va~---------a~gA~~TP------e~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~ 70 (97)
.++||++. |.++.+++ .||...+| ..||||++|+ ++-+|.|.++ ...|.+
T Consensus 112 ~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~--i~~~~~g~~~-----------~~~l~~ 178 (190)
T 2vup_A 112 KAEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGV--PVERFSPGAS-----------VKDIEK 178 (190)
T ss_dssp CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSC--EEEEECTTCC-----------HHHHHH
T ss_pred CCCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCc--EEEEECCCCC-----------HHHHHH
Confidence 57899986 77776543 35888899 9999999995 3334445432 337899
Q ss_pred HHHHHHcCC
Q 034345 71 AIECVLSGQ 79 (97)
Q Consensus 71 Ai~alLaG~ 79 (97)
.|+++|+..
T Consensus 179 ~i~~ll~~~ 187 (190)
T 2vup_A 179 KLIPLLEST 187 (190)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHHhhc
Confidence 999998753
No 90
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=97.42 E-value=0.00028 Score=44.83 Aligned_cols=52 Identities=10% Similarity=0.273 Sum_probs=39.9
Q ss_pred ChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034345 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (97)
Q Consensus 17 ~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v 81 (97)
+...+++.||...+|+++++|++|+ +..+|.|..+ ...|.+.|+.++.....
T Consensus 74 ~~~~~~~~~~v~~~Pt~~~~d~~G~--~~~~~~G~~~-----------~~~l~~~l~~~~~~~~~ 125 (130)
T 2kuc_A 74 EGVELRKKYGVHAYPTLLFINSSGE--VVYRLVGAED-----------APELLKKVKLGVESEGH 125 (130)
T ss_dssp THHHHHHHTTCCSSCEEEEECTTSC--EEEEEESCCC-----------HHHHHHHHHHHHSCCC-
T ss_pred chHHHHHHcCCCCCCEEEEECCCCc--EEEEecCCCC-----------HHHHHHHHHHHHHhccc
Confidence 4678999999999999999999995 3445667532 34788899988876543
No 91
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=97.42 E-value=0.00061 Score=48.42 Aligned_cols=40 Identities=10% Similarity=-0.137 Sum_probs=33.2
Q ss_pred hcc-eeEEEeChhhHHHHhCCcc-----------CceEEEEecCCCCCeeEEEeeec
Q 034345 8 FLM-WLITLFQSQDVARDFGAAC-----------TPEFFLFKKDGRRPFQLVYHGQF 52 (97)
Q Consensus 8 ~~~-fpvL~D~~q~va~a~gA~~-----------TPe~fvld~~g~~~~~l~Y~G~I 52 (97)
.++ ||+|.|++++++++||+.. .|.+||| ++| +++|+..-
T Consensus 91 ~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~t~li-~~G----~i~~~~~~ 142 (241)
T 1nm3_A 91 KSENISFIPDGNGEFTEGMGMLVGKEDLGFGKRSWRYSMLV-KNG----VVEKMFIE 142 (241)
T ss_dssp TCTTSEEEECTTSHHHHHTTCEEECTTTTCCEEECCEEEEE-ETT----EEEEEEEC
T ss_pred CCCceEEEECCCcHHHHHhCceeecccccCcccceeEEEEE-ECC----EEEEEEEe
Confidence 355 9999999999999999873 4899999 999 67777543
No 92
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=97.34 E-value=5.5e-05 Score=51.80 Aligned_cols=56 Identities=16% Similarity=0.071 Sum_probs=36.0
Q ss_pred hcceeEEE--eChhhHHH-Hh----------CCc-----cCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHH
Q 034345 8 FLMWLITL--FQSQDVAR-DF----------GAA-----CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIR 69 (97)
Q Consensus 8 ~~~fpvL~--D~~q~va~-a~----------gA~-----~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~ 69 (97)
.++||++. |.++..+. .| |.. .+|+.||||++|+ ++.+|.|..+. ..|+
T Consensus 112 ~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~--i~~~~~g~~~~-----------~~l~ 178 (185)
T 2gs3_A 112 NVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGC--VVKRYGPMEEP-----------LVIE 178 (185)
T ss_dssp TCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSC--EEEEECTTSCG-----------GGGG
T ss_pred CCCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCC--EEEeeCCCCCH-----------HHHH
Confidence 56799996 66776553 44 433 3699999999995 44455564322 2466
Q ss_pred HHHHHHH
Q 034345 70 LAIECVL 76 (97)
Q Consensus 70 ~Ai~alL 76 (97)
++|+.+|
T Consensus 179 ~~i~~lL 185 (185)
T 2gs3_A 179 KDLPHYF 185 (185)
T ss_dssp GGHHHHC
T ss_pred HHHHHhC
Confidence 6676654
No 93
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=97.34 E-value=0.00051 Score=45.85 Aligned_cols=51 Identities=14% Similarity=0.206 Sum_probs=37.4
Q ss_pred eChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034345 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (97)
Q Consensus 16 D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG 78 (97)
|..+++++.||...+|+++++|++|+ +.-++ |..+. +...+.+.|+.+++.
T Consensus 103 ~~~~~l~~~~~v~~~Pt~~~~d~~G~--~~~~~-G~~~~---------~~~~l~~~l~~~l~~ 153 (154)
T 2ju5_A 103 QKNQELKAQYKVTGFPELVFIDAEGK--QLARM-GFEPG---------GGAAYVSKVKSALKL 153 (154)
T ss_dssp HHHHHHHHHTTCCSSSEEEEECTTCC--EEEEE-CCCTT---------CHHHHHHHHHHHHTC
T ss_pred hhHHHHHHHcCCCCCCEEEEEcCCCC--EEEEe-cCCCC---------CHHHHHHHHHHHHhc
Confidence 33468999999999999999999995 33344 65411 244688888888764
No 94
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=97.31 E-value=4.4e-05 Score=51.94 Aligned_cols=42 Identities=19% Similarity=0.118 Sum_probs=29.2
Q ss_pred hcceeEEE--eChhhHHH-Hh----------CCc-----cCceEEEEecCCCCCeeEEEeee
Q 034345 8 FLMWLITL--FQSQDVAR-DF----------GAA-----CTPEFFLFKKDGRRPFQLVYHGQ 51 (97)
Q Consensus 8 ~~~fpvL~--D~~q~va~-a~----------gA~-----~TPe~fvld~~g~~~~~l~Y~G~ 51 (97)
.++||++. |.++..+. .| |.. .+|+.||||++|+ ++-+|.|.
T Consensus 110 ~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~--i~~~~~g~ 169 (183)
T 2obi_A 110 NVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGC--VVKRYGPM 169 (183)
T ss_dssp TCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSC--EEEEECTT
T ss_pred CCCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCC--EEEEeCCC
Confidence 56899997 87777653 34 433 3599999999995 44455564
No 95
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=97.27 E-value=0.00013 Score=51.58 Aligned_cols=38 Identities=37% Similarity=0.385 Sum_probs=27.3
Q ss_pred CccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 27 AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 27 A~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
...+|+.||||++|+ ++-+|.|..+. ..|+++|+.+|+
T Consensus 170 i~~~p~tflID~~G~--i~~~~~g~~~~-----------~~l~~~I~~ll~ 207 (208)
T 2f8a_A 170 VAWNFEKFLVGPDGV--PLRRYSRRFQT-----------IDIEPDIEALLS 207 (208)
T ss_dssp CCSTTCEEEECTTSC--EEEEECTTSCG-----------GGGHHHHHHHHC
T ss_pred cccCceEEEEcCCCc--EEEEeCCCCCH-----------HHHHHHHHHHhh
Confidence 345699999999995 45556665432 258888988875
No 96
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=97.27 E-value=2.5e-05 Score=53.33 Aligned_cols=57 Identities=12% Similarity=0.130 Sum_probs=38.9
Q ss_pred hhcceeEEE--eChhhHHH---HhCCccCc-------eEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHH
Q 034345 7 LFLMWLITL--FQSQDVAR---DFGAACTP-------EFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (97)
Q Consensus 7 ~~~~fpvL~--D~~q~va~---a~gA~~TP-------e~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~a 74 (97)
..++||++. |.++..+. .|+...+| ..||||++|+ ++-+|.|..+ ...|+++|++
T Consensus 112 ~~~~~p~~~~~d~~g~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~--i~~~~~g~~~-----------~~~l~~~i~~ 178 (181)
T 2p31_A 112 YSVSFPMFSKIAVTGTGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGK--VVGAWDPTVS-----------VEEVRPQITA 178 (181)
T ss_dssp HCCCSCBBCCCCCSSTTSCHHHHHHHHHHSCCCCSTTCEEEECTTSC--EEEEECTTSC-----------HHHHHHHHHT
T ss_pred cCCCceeEeecccCCccchhhhhhhhhcCCCccccceeEEEEcCCCC--EEEEeCCCCC-----------HHHHHHHHHH
Confidence 357899995 56665543 45577889 9999999995 3444555322 3478888887
Q ss_pred HH
Q 034345 75 VL 76 (97)
Q Consensus 75 lL 76 (97)
+|
T Consensus 179 ll 180 (181)
T 2p31_A 179 LV 180 (181)
T ss_dssp TC
T ss_pred Hh
Confidence 76
No 97
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=97.23 E-value=0.00038 Score=47.21 Aligned_cols=54 Identities=4% Similarity=-0.090 Sum_probs=38.8
Q ss_pred ChhhHHHHhCC---------ccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCCC
Q 034345 17 QSQDVARDFGA---------ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVS 82 (97)
Q Consensus 17 ~~q~va~a~gA---------~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v~ 82 (97)
+.++++++||. ..+|.+||||++|+ ++-+|.|. + ....++..+|++++.-.++.
T Consensus 105 ~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~--i~~~~~g~-~---------~~~~~i~~~l~~~~~~~~~~ 167 (170)
T 3me7_A 105 DLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQ--IKDYIYGV-N---------YNYLEFVNALRLARGEGHHH 167 (170)
T ss_dssp HHHHHHHHTTCCCEEETTEEECCCEEEEECTTSB--EEEEEESS-S---------CCHHHHHHHHHHHTTCSCTT
T ss_pred HHHHHHHHCCeEEecCCCccccCceEEEECCCCe--EEEEEeCC-C---------CCHHHHHHHHHHhhcccccc
Confidence 55789999873 57899999999995 44445664 1 12558999999888766554
No 98
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=97.16 E-value=0.00087 Score=42.86 Aligned_cols=52 Identities=15% Similarity=0.388 Sum_probs=38.6
Q ss_pred eChhhHHHHhCC---ccCceEEEEecCCCCCeeEEEe--e-ecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 16 FQSQDVARDFGA---ACTPEFFLFKKDGRRPFQLVYH--G-QFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 16 D~~q~va~a~gA---~~TPe~fvld~~g~~~~~l~Y~--G-~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
|...++++.||. ..+|+++++|++| ++.++ | .+.+.. ..+...+++.|+.+.
T Consensus 75 ~~~~~l~~~~~v~~~~~~Pt~~~~d~~G----~~~~~~~g~~~~~~~-----~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 75 DRNLELSQAYGDPIQDGIPAVVVVNSDG----KVRYTTKGGELANAR-----KMSDQGIYDFFAKIT 132 (133)
T ss_dssp TSSHHHHHHTTCGGGGCSSEEEEECTTS----CEEEECCSCTTTTGG-----GSCHHHHHHHHHHHH
T ss_pred cchHHHHHHhCCccCCccceEEEECCCC----CEEEEecCCcccccc-----cCCHHHHHHHHHHhc
Confidence 678899999999 9999999999999 45555 3 443331 234567888777764
No 99
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=96.17 E-value=7.5e-05 Score=47.81 Aligned_cols=40 Identities=20% Similarity=0.310 Sum_probs=32.0
Q ss_pred eeEEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCC
Q 034345 11 WLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDD 54 (97)
Q Consensus 11 fpvL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd 54 (97)
+|+..|..++++++||...+|++||||++| +++++...++
T Consensus 90 ~~~~~~~~~~~~~~~~v~~~P~~~lid~~G----~i~~~~~~~~ 129 (143)
T 2lus_A 90 IPYRSGPASNVTAKYGITGIPALVIVKKDG----TLISMNGRGE 129 (143)
Confidence 556677778999999999999999999999 5666544333
No 100
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=97.10 E-value=0.00059 Score=41.95 Aligned_cols=50 Identities=10% Similarity=0.147 Sum_probs=37.2
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG 78 (97)
.|...++++.||...+|+++++ ++|+ ..-+|.|..+ ...|.+.|++++.+
T Consensus 65 ~~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~g~~~-----------~~~l~~~l~~~l~~ 114 (115)
T 1thx_A 65 IDPNPTTVKKYKVEGVPALRLV-KGEQ--ILDSTEGVIS-----------KDKLLSFLDTHLNN 114 (115)
T ss_dssp STTCHHHHHHTTCCSSSEEEEE-ETTE--EEEEEESCCC-----------HHHHHHHHHHHHC-
T ss_pred cCCCHHHHHHcCCCceeEEEEE-cCCE--EEEEecCCCC-----------HHHHHHHHHHHhcC
Confidence 4667789999999999999999 7884 2334566532 34788899888764
No 101
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=97.09 E-value=0.00016 Score=46.80 Aligned_cols=38 Identities=8% Similarity=0.095 Sum_probs=30.4
Q ss_pred ceeEEE-eChhhHHHHhCCccCceEEEEe-cCCCCCeeEEEeee
Q 034345 10 MWLITL-FQSQDVARDFGAACTPEFFLFK-KDGRRPFQLVYHGQ 51 (97)
Q Consensus 10 ~fpvL~-D~~q~va~a~gA~~TPe~fvld-~~g~~~~~l~Y~G~ 51 (97)
.||++. |..++++++||...+|++|||| ++| +++++..
T Consensus 88 ~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~~G----~i~~~~~ 127 (144)
T 1i5g_A 88 ALPFEDRKGMEFLTTGFDVKSIPTLVGVEADSG----NIITTQA 127 (144)
T ss_dssp ECCTTCHHHHHHHHHHTTCCSSSEEEEEETTTC----CEEESCH
T ss_pred ccccCchHHHHHHHHHcCCCCCCEEEEEECCCC----cEEeccc
Confidence 345444 5678999999999999999999 899 5777654
No 102
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=97.08 E-value=0.00065 Score=41.53 Aligned_cols=49 Identities=20% Similarity=0.396 Sum_probs=36.5
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
.|...++++.||...+|+++++ ++|+ ..-+|.|..+ ...|.+.|+++|+
T Consensus 60 ~~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~~~-----------~~~l~~~l~~~l~ 108 (108)
T 2trx_A 60 IDQNPGTAPKYGIRGIPTLLLF-KNGE--VAATKVGALS-----------KGQLKEFLDANLA 108 (108)
T ss_dssp TTTCTTHHHHTTCCSSSEEEEE-ETTE--EEEEEESCCC-----------HHHHHHHHHHHHC
T ss_pred CCCCHHHHHHcCCcccCEEEEE-eCCE--EEEEEecCCC-----------HHHHHHHHHHhhC
Confidence 3667889999999999999999 7774 2345666532 3478888888764
No 103
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=97.04 E-value=0.00096 Score=46.30 Aligned_cols=42 Identities=14% Similarity=0.213 Sum_probs=27.9
Q ss_pred cceeEEE---eChhhHHHHhCCc-cC---------------ceEEEEecCCCCCeeEEEeeec
Q 034345 9 LMWLITL---FQSQDVARDFGAA-CT---------------PEFFLFKKDGRRPFQLVYHGQF 52 (97)
Q Consensus 9 ~~fpvL~---D~~q~va~a~gA~-~T---------------Pe~fvld~~g~~~~~l~Y~G~I 52 (97)
.+|+.|. |+.+.++++||+. .. |.+||||++|+ ++-+|.|.+
T Consensus 105 ~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~--i~~~~~g~~ 165 (200)
T 2b7k_A 105 PSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQ--FVDALGRNY 165 (200)
T ss_dssp TTCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSC--EEEEECTTC
T ss_pred CCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCc--EEEEeCCCC
Confidence 4577765 4567899999986 33 47899999995 444444443
No 104
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=97.03 E-value=0.00018 Score=46.69 Aligned_cols=38 Identities=13% Similarity=0.199 Sum_probs=30.1
Q ss_pred ceeEEE-eChhhHHHHhCCccCceEEEEe-cCCCCCeeEEEeee
Q 034345 10 MWLITL-FQSQDVARDFGAACTPEFFLFK-KDGRRPFQLVYHGQ 51 (97)
Q Consensus 10 ~fpvL~-D~~q~va~a~gA~~TPe~fvld-~~g~~~~~l~Y~G~ 51 (97)
.||++. |..++++++||...+|++|||| ++| +++++..
T Consensus 88 ~~~~~~~d~~~~~~~~~~v~~~Pt~~lid~~~G----~i~~~~~ 127 (146)
T 1o8x_A 88 AVPFAQSEAVQKLSKHFNVESIPTLIGVDADSG----DVVTTRA 127 (146)
T ss_dssp ECCGGGHHHHHHHHHHTTCCSSSEEEEEETTTC----CEEESCH
T ss_pred eeccchhhHHHHHHHHhCCCCCCEEEEEECCCC----eEEEecc
Confidence 445444 5678999999999999999999 899 5666543
No 105
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=96.97 E-value=0.001 Score=40.54 Aligned_cols=48 Identities=25% Similarity=0.350 Sum_probs=35.3
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
.|+..++++.||...+|+++++ ++|+ ..-+|.|..+ ...|++.|+++|
T Consensus 59 ~~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~~~-----------~~~l~~~l~~~l 106 (107)
T 1dby_A 59 TDESPNVASEYGIRSIPTIMVF-KGGK--KCETIIGAVP-----------KATIVQTVEKYL 106 (107)
T ss_dssp TTTCHHHHHHHTCCSSCEEEEE-SSSS--EEEEEESCCC-----------HHHHHHHHHHHC
T ss_pred CCCCHHHHHHCCCCcCCEEEEE-eCCE--EEEEEeCCCC-----------HHHHHHHHHHHh
Confidence 3567789999999999998777 6774 3445667542 336888888775
No 106
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=96.94 E-value=0.001 Score=39.76 Aligned_cols=49 Identities=24% Similarity=0.392 Sum_probs=36.7
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
.|+..++++.||...+|+++++ ++|+ ..-+|.|..+ ...|.+.|+.++.
T Consensus 55 ~~~~~~~~~~~~v~~~Pt~~~~-~~g~--~~~~~~g~~~-----------~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 55 SDENPDIAARYGVMSLPTVIFF-KDGE--PVDEIIGAVP-----------REEIEIRIKNLLG 103 (104)
T ss_dssp TTTCHHHHHHTTCCSSCEEEEE-ETTE--EEEEEESCCC-----------HHHHHHHHHHHHT
T ss_pred CCCCHHHHHhCCccccCEEEEE-ECCe--EhhhccCCCC-----------HHHHHHHHHHHhc
Confidence 3667889999999999999999 7773 2345667532 3478888888764
No 107
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=96.90 E-value=0.0012 Score=42.77 Aligned_cols=51 Identities=20% Similarity=0.346 Sum_probs=38.6
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~ 79 (97)
.|...++++.||...+|+++++ ++|+ ..-+|.|..+ ...|.+.|+.+|+|+
T Consensus 90 ~~~~~~l~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~~~-----------~~~l~~~i~~~l~~~ 140 (140)
T 1v98_A 90 VDEHPGLAARYGVRSVPTLVLF-RRGA--PVATWVGASP-----------RRVLEERLRPYLEGR 140 (140)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEE-ETTE--EEEEEESCCC-----------HHHHHHHHHHHHTCC
T ss_pred CCCCHHHHHHCCCCccCEEEEE-eCCc--EEEEEeCCCC-----------HHHHHHHHHHHHccC
Confidence 3566789999999999999999 6773 2345666532 347999999999874
No 108
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=96.85 E-value=0.00035 Score=44.87 Aligned_cols=32 Identities=13% Similarity=0.372 Sum_probs=26.9
Q ss_pred eChhhHHHHhCCccCceEEEEe-cCCCCCeeEEEeee
Q 034345 16 FQSQDVARDFGAACTPEFFLFK-KDGRRPFQLVYHGQ 51 (97)
Q Consensus 16 D~~q~va~a~gA~~TPe~fvld-~~g~~~~~l~Y~G~ 51 (97)
|..++++++||...+|++||+| ++| +++++..
T Consensus 95 ~~~~~~~~~~~v~~~Pt~~lid~~~G----~i~~~~~ 127 (144)
T 1o73_A 95 STVSELGKTFGVESIPTLITINADTG----AIIGTQA 127 (144)
T ss_dssp HHHHHHHHHHTCCSSSEEEEEETTTC----CEEESCH
T ss_pred hHHHHHHHHcCCCCCCEEEEEECCCC----eEEecch
Confidence 5567899999999999999999 899 5666643
No 109
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=96.81 E-value=0.00038 Score=45.20 Aligned_cols=35 Identities=17% Similarity=0.339 Sum_probs=28.4
Q ss_pred eChhhHHHHhCCccCceEEEEecCCCCCeeE---EEeeecC
Q 034345 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQL---VYHGQFD 53 (97)
Q Consensus 16 D~~q~va~a~gA~~TPe~fvld~~g~~~~~l---~Y~G~ID 53 (97)
|...++++.||...+|+++++|++|+ .+ +|.|.++
T Consensus 78 ~~~~~l~~~~~v~~~Pt~~~~d~~G~---~v~~~~~~G~~~ 115 (134)
T 2fwh_A 78 AQDVALLKHLNVLGLPTILFFDGQGQ---EHPQARVTGFMD 115 (134)
T ss_dssp HHHHHHHHHTTCCSSSEEEEECTTSC---BCGGGCBCSCCC
T ss_pred chHHHHHHHcCCCCCCEEEEECCCCC---EeeeeeeeeccC
Confidence 45678999999999999999999995 32 5777643
No 110
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=96.80 E-value=0.0012 Score=40.11 Aligned_cols=49 Identities=16% Similarity=0.317 Sum_probs=36.8
Q ss_pred EEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 14 TLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 14 L~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
=.|...++++.||...+|+++++ ++|+ ..-+|.|..+ ...|...|+.++
T Consensus 60 ~~~~~~~~~~~~~i~~~Pt~~~~-~~g~--~~~~~~g~~~-----------~~~l~~~l~~~l 108 (109)
T 3tco_A 60 NVDENQKIADKYSVLNIPTTLIF-VNGQ--LVDSLVGAVD-----------EDTLESTVNKYL 108 (109)
T ss_dssp ETTTCHHHHHHTTCCSSSEEEEE-ETTE--EEEEEESCCC-----------HHHHHHHHHHHC
T ss_pred ccccCHHHHHhcCcccCCEEEEE-cCCc--EEEeeeccCC-----------HHHHHHHHHHHh
Confidence 35777889999999999999999 7884 3455667542 336888887765
No 111
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=96.78 E-value=0.00056 Score=41.65 Aligned_cols=48 Identities=23% Similarity=0.355 Sum_probs=34.1
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
.|+..++++.||...+|+++++ ++|+ ..-+|.|..+ ...|.+.|+.+|
T Consensus 57 ~~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~~~-----------~~~l~~~l~~~l 104 (105)
T 1nsw_A 57 VDENPETTSQFGIMSIPTLILF-KGGR--PVKQLIGYQP-----------KEQLEAQLADVL 104 (105)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEE-ETTE--EEEEEESCCC-----------HHHHHHHTTTTT
T ss_pred CcCCHHHHHHcCCccccEEEEE-eCCe--EEEEEecCCC-----------HHHHHHHHHHHh
Confidence 3667889999999999999999 7873 2335666532 235777666554
No 112
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=96.77 E-value=0.0016 Score=41.94 Aligned_cols=53 Identities=23% Similarity=0.414 Sum_probs=39.8
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCCC
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVS 82 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v~ 82 (97)
.|+..++++.||...+|+++++ ++|+ ..-++.|. + ...|++.|+.++.+.+..
T Consensus 85 ~~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~-~-----------~~~l~~~l~~~~~~~~~~ 137 (139)
T 3d22_A 85 VDELSDFSASWEIKATPTFFFL-RDGQ--QVDKLVGA-N-----------KPELHKKITAILDSLPPS 137 (139)
T ss_dssp TTTSHHHHHHTTCCEESEEEEE-ETTE--EEEEEESC-C-----------HHHHHHHHHHHHHTSCTT
T ss_pred CcccHHHHHHcCCCcccEEEEE-cCCe--EEEEEeCC-C-----------HHHHHHHHHHHhccCCCC
Confidence 5677889999999999998888 7884 23345554 1 347999999999886543
No 113
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=96.77 E-value=0.0014 Score=40.35 Aligned_cols=49 Identities=14% Similarity=0.259 Sum_probs=35.7
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
.|+..++++.||...+|+++++ ++|+ ..-+|.|..+ ...|.+.|+.+|+
T Consensus 63 ~~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~~~-----------~~~l~~~l~~~l~ 111 (112)
T 1t00_A 63 IDENPGTAAKYGVMSIPTLNVY-QGGE--VAKTIVGAKP-----------KAAIVRDLEDFIA 111 (112)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEE-ETTE--EEEEEESCCC-----------HHHHHHHTHHHHC
T ss_pred cCCCHHHHHhCCCCcccEEEEE-eCCE--EEEEEeCCCC-----------HHHHHHHHHHHhh
Confidence 4667889999999999997777 6773 2344666532 3468888888775
No 114
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.72 E-value=0.0015 Score=41.26 Aligned_cols=50 Identities=24% Similarity=0.287 Sum_probs=38.3
Q ss_pred eChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034345 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (97)
Q Consensus 16 D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~ 79 (97)
|...++++.|+...+|+++++++ |+ ...+|.|..+ ...|.+.|+.++...
T Consensus 70 ~~~~~l~~~~~v~~~Pt~~~~~~-g~--~~~~~~G~~~-----------~~~l~~~l~~~~~~~ 119 (133)
T 1x5d_A 70 TVNQVLASRYGIRGFPTIKIFQK-GE--SPVDYDGGRT-----------RSDIVSRALDLFSDN 119 (133)
T ss_dssp TTCCHHHHHHTCCSSSEEEEEET-TE--EEEEECSCCS-----------HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHhCCCCeeCeEEEEeC-CC--ceEEecCCCC-----------HHHHHHHHHHHhhcc
Confidence 56678999999999999999998 53 3567777543 346888888887654
No 115
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=96.71 E-value=0.00049 Score=46.32 Aligned_cols=29 Identities=14% Similarity=0.363 Sum_probs=26.0
Q ss_pred hhHHHHhCCccCceEEEEecC-CCCCeeEEEeee
Q 034345 19 QDVARDFGAACTPEFFLFKKD-GRRPFQLVYHGQ 51 (97)
Q Consensus 19 q~va~a~gA~~TPe~fvld~~-g~~~~~l~Y~G~ 51 (97)
+++++.||...+|++||||++ | +++++..
T Consensus 118 ~~l~~~~~v~~~Pt~~lid~~~G----~iv~~~~ 147 (165)
T 3s9f_A 118 EALTKKYSVESIPTLIGLNADTG----DTVTTRA 147 (165)
T ss_dssp HHHHHHTTCCSSSEEEEEETTTC----CEEESCH
T ss_pred HHHHHHcCCCCCCEEEEEeCCCC----EEEeccc
Confidence 899999999999999999998 8 6777754
No 116
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=96.70 E-value=0.0013 Score=39.90 Aligned_cols=47 Identities=13% Similarity=0.294 Sum_probs=33.9
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHH
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECV 75 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~al 75 (97)
.|...++++.||...+|+++++ ++|+ ..-+|.|..+ ...|.+.|+++
T Consensus 60 ~~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~~~-----------~~~l~~~l~~~ 106 (107)
T 2i4a_A 60 IDDNPETPNAYQVRSIPTLMLV-RDGK--VIDKKVGALP-----------KSQLKAWVESA 106 (107)
T ss_dssp TTTCCHHHHHTTCCSSSEEEEE-ETTE--EEEEEESCCC-----------HHHHHHHHHHT
T ss_pred CCCCHHHHHhcCCCccCEEEEE-eCCE--EEEEecCCCC-----------HHHHHHHHHhc
Confidence 3667789999999999999999 7884 2334666532 33677777654
No 117
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=96.67 E-value=0.0022 Score=40.49 Aligned_cols=48 Identities=15% Similarity=0.302 Sum_probs=35.4
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
.|...++++.||...+|+++++ ++|+ ..-+|.|..+ ...|.+.|+.++
T Consensus 71 ~d~~~~l~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~~~-----------~~~l~~~l~~~l 118 (119)
T 1w4v_A 71 IDDHTDLAIEYEVSAVPTVLAM-KNGD--VVDKFVGIKD-----------EDQLEAFLKKLI 118 (119)
T ss_dssp TTTTHHHHHHTTCCSSSEEEEE-ETTE--EEEEEESCCC-----------HHHHHHHHHHHH
T ss_pred CCCCHHHHHHcCCCcccEEEEE-eCCc--EEEEEcCCCC-----------HHHHHHHHHHHh
Confidence 4667789999999999999999 7883 2335666532 336888887765
No 118
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=96.64 E-value=0.001 Score=44.70 Aligned_cols=54 Identities=17% Similarity=0.297 Sum_probs=37.7
Q ss_pred EEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCC
Q 034345 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQP 80 (97)
Q Consensus 13 vL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~ 80 (97)
|=.|+..++++.||...+|+++++ ++|+ ..-+|.|..+ ...|++.|+.+++...
T Consensus 75 Vd~d~~~~la~~~~V~~iPT~~~f-k~G~--~v~~~~G~~~-----------~~~l~~~i~~~l~~~~ 128 (142)
T 2es7_A 75 ADLEQSEAIGDRFNVRRFPATLVF-TDGK--LRGALSGIHP-----------WAELLTLMRSIVDTPA 128 (142)
T ss_dssp ECHHHHHHHHHTTTCCSSSEEEEE-SCC------CEESCCC-----------HHHHHHHHHHHHC---
T ss_pred EECCCCHHHHHhcCCCcCCeEEEE-eCCE--EEEEEeCCCC-----------HHHHHHHHHHHhcccc
Confidence 335677899999999999999999 7885 3445777543 3368899998886543
No 119
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=96.61 E-value=0.0024 Score=45.18 Aligned_cols=39 Identities=8% Similarity=-0.020 Sum_probs=32.6
Q ss_pred hcc--eeEEEeChhhHHHHhCCc-----------cCceEEEEecCCCCCeeEEEeee
Q 034345 8 FLM--WLITLFQSQDVARDFGAA-----------CTPEFFLFKKDGRRPFQLVYHGQ 51 (97)
Q Consensus 8 ~~~--fpvL~D~~q~va~a~gA~-----------~TPe~fvld~~g~~~~~l~Y~G~ 51 (97)
.++ ||+|.|.+++++++||.. ..+.+||| ++| +++|.-.
T Consensus 105 ~l~~~f~lLsD~~~~va~ayGv~~~~~~~G~g~~s~R~tfII-~dG----~I~~~~~ 156 (176)
T 4f82_A 105 HTAGKVRMMADGSAAFTHALGLTQDLSARGMGIRSLRYAMVI-DGG----VVKTLAV 156 (176)
T ss_dssp TCTTTSEEEECTTCHHHHHHTCEEECGGGTCCEEECCEEEEE-ETT----EEEEEEE
T ss_pred CCCCCceEEEcCchHHHHHhCCCccccccCCCcccccEEEEE-cCC----EEEEEEE
Confidence 355 999999999999999974 25899999 999 7877754
No 120
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=96.60 E-value=0.0084 Score=42.18 Aligned_cols=63 Identities=10% Similarity=-0.093 Sum_probs=40.9
Q ss_pred ceeEEEeChhhHHHHhCCc-----------cCceEEEEecCCCCCeeEEEeeecCCCCC-CCCCCCcHHHHHHHHHHHHc
Q 034345 10 MWLITLFQSQDVARDFGAA-----------CTPEFFLFKKDGRRPFQLVYHGQFDDSRP-SNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 10 ~fpvL~D~~q~va~a~gA~-----------~TPe~fvld~~g~~~~~l~Y~G~IDd~~~-~~~~~~t~~~L~~Ai~alLa 77 (97)
+||+|-|.+++++++||.. ....+|||| +| +++|.-.-.+... ....+++....++.++.|-+
T Consensus 105 ~f~lLsD~~~~~a~~yGv~~~~~~~G~g~~~~R~tfvId-dG----~V~~~~v~~~~~~~~~~~~~~~~~~~~vL~~L~~ 179 (182)
T 1xiy_A 105 KIKYISDGNSSFTDSMNMLVDKSNFFMGMRPWRFVAIVE-NN----ILVKMFQEKDKQHNIQTDPYDISTVNNVKEFLKN 179 (182)
T ss_dssp SSEEEECTTSHHHHHTTCEEECGGGTCCEEECCEEEEEE-TT----EEEEEEECSSCCTTCSSCCCSTTSHHHHHHHHHC
T ss_pred CceEEEeCchHHHHHhCCceeccccCCCCceEEEEEEEc-CC----EEEEEEEeCCcccccccCcccCCCHHHHHHHHHh
Confidence 6999999999999999964 245789998 88 7888754222210 00112233356666666654
No 121
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=95.63 E-value=0.00033 Score=44.63 Aligned_cols=56 Identities=16% Similarity=0.230 Sum_probs=39.7
Q ss_pred eChhhHHHHhCCccCceEEEEecC-CCCCe--eEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCCC
Q 034345 16 FQSQDVARDFGAACTPEFFLFKKD-GRRPF--QLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVSSN 84 (97)
Q Consensus 16 D~~q~va~a~gA~~TPe~fvld~~-g~~~~--~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v~~~ 84 (97)
|+..++++.||...+|+++++|++ |+ + ..++.|..+.. .|...|+.++++..-...
T Consensus 65 ~~~~~~~~~~~v~~~Pt~~~~d~~~G~--~~~~~~~~G~~~~~-----------~l~~~l~~~~~~~~~~~~ 123 (130)
T 2lst_A 65 PEGQELARRYRVPGTPTFVFLVPKAGA--WEEVGRLFGSRPRA-----------EFLKELRQVCVKGGACGE 123 (130)
Confidence 355789999999999999999964 63 2 23677765433 577778777776554443
No 122
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=96.59 E-value=0.0012 Score=46.92 Aligned_cols=36 Identities=19% Similarity=0.253 Sum_probs=25.4
Q ss_pred CceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034345 30 TPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (97)
Q Consensus 30 TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG 78 (97)
.|+.||||++|+ ++.+|.|.++ ...|+..|+++|+.
T Consensus 159 ~~ttflID~~G~--i~~~~~g~~~-----------~~~l~~~I~~ll~~ 194 (207)
T 2r37_A 159 NFEKFLVGPDGI--PIMRWHHRTT-----------VSNVKMDILSYMRR 194 (207)
T ss_dssp TTCEEEECTTSC--EEEEECTTSC-----------HHHHHHHHHHHHHH
T ss_pred cceEEEECCCCc--EEEEECCCCC-----------HHHHHHHHHHHHhh
Confidence 389999999995 4445555432 24788889988864
No 123
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.59 E-value=0.0032 Score=40.26 Aligned_cols=51 Identities=18% Similarity=0.239 Sum_probs=38.4
Q ss_pred eChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034345 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (97)
Q Consensus 16 D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v 81 (97)
|...++++.||...+|+++++ ++|+ ..+|.|..+ ...|.+.|+.++.....
T Consensus 78 ~~~~~~~~~~~v~~~Pt~~~~-~~G~---~~~~~g~~~-----------~~~l~~~l~~~~~~~~~ 128 (140)
T 2dj1_A 78 TSASMLASKFDVSGYPTIKIL-KKGQ---AVDYDGSRT-----------QEEIVAKVREVSQPDWT 128 (140)
T ss_dssp TTCHHHHHHTTCCSSSEEEEE-ETTE---EEECCSCCC-----------HHHHHHHHHHHHSSSCC
T ss_pred cccHHHHHHCCCCccCeEEEE-ECCc---EEEcCCCCC-----------HHHHHHHHHHhcCCCCC
Confidence 455689999999999999999 6773 566777532 44788999888865443
No 124
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=96.59 E-value=0.0031 Score=38.65 Aligned_cols=48 Identities=19% Similarity=0.240 Sum_probs=34.8
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
.|+..++++.||...+|+++++ ++|+ ..-+|.|. + ...|++.|+.+++
T Consensus 64 ~~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~-~-----------~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 64 VDAVAAVAEAAGITAMPTFHVY-KDGV--KADDLVGA-S-----------QDKLKALVAKHAA 111 (112)
T ss_dssp TTTTHHHHHHHTCCBSSEEEEE-ETTE--EEEEEESC-C-----------HHHHHHHHHHHHC
T ss_pred CCchHHHHHHcCCCcccEEEEE-ECCe--EEEEEcCC-C-----------HHHHHHHHHHHhc
Confidence 3567789999999999996665 7774 23456664 2 3368888988875
No 125
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=96.58 E-value=0.0014 Score=42.45 Aligned_cols=49 Identities=20% Similarity=0.396 Sum_probs=36.8
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
.|+..++++.||...+|+++++ ++|+ ..-+|.|..+ ...|.+.|+++|+
T Consensus 80 ~~~~~~l~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~~~-----------~~~l~~~l~~~l~ 128 (128)
T 2o8v_B 80 IDQNPGTAPKYGIRGIPTLLLF-KNGE--VAATKVGALS-----------KGQLKEFLDANLA 128 (128)
T ss_dssp TTTCCTTSGGGTCCSSSEEEEE-ETTE--EEEEEESCCC-----------HHHHHHHHHHHHC
T ss_pred CCCCHHHHHHcCCCccCEEEEE-eCCE--EEEEEcCCCC-----------HHHHHHHHHHhhC
Confidence 4667889999999999999999 7884 2345666532 3478888888764
No 126
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=96.58 E-value=0.0013 Score=47.21 Aligned_cols=36 Identities=19% Similarity=0.163 Sum_probs=25.9
Q ss_pred CceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034345 30 TPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (97)
Q Consensus 30 TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG 78 (97)
.|+.||||++|+ ++-+|.|.++ ...|+.+|+++|+.
T Consensus 177 npttfLID~~G~--vv~~~~g~~~-----------~~~l~~~I~~ll~~ 212 (215)
T 2i3y_A 177 NFEKFLVGPDGI--PVMRWSHRAT-----------VSSVKTDILAYLKQ 212 (215)
T ss_dssp TTCEEEECTTSC--EEEEECTTSC-----------HHHHHHHHHHHGGG
T ss_pred CceEEEECCCCe--EEEEeCCCCC-----------HHHHHHHHHHHHHH
Confidence 389999999995 4445555432 24799999999863
No 127
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.57 E-value=0.0019 Score=40.90 Aligned_cols=51 Identities=20% Similarity=0.220 Sum_probs=37.7
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG 78 (97)
.|...++++.|+...+|+++++++++. ...+|.|..+ ...|.+.|...+..
T Consensus 75 ~~~~~~l~~~~~v~~~Pt~~~~~~~~~--~~~~~~G~~~-----------~~~l~~~l~~~l~~ 125 (130)
T 2dml_A 75 ADKHQSLGGQYGVQGFPTIKIFGANKN--KPEDYQGGRT-----------GEAIVDAALSALRS 125 (130)
T ss_dssp TTTCHHHHHHHTCCSSSEEEEESSCTT--SCEECCSCCS-----------HHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHcCCCccCEEEEEeCCCC--eEEEeecCCC-----------HHHHHHHHHHHHhc
Confidence 456778999999999999999999884 2567777532 23566666666543
No 128
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=96.55 E-value=0.0045 Score=37.82 Aligned_cols=48 Identities=19% Similarity=0.326 Sum_probs=34.5
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
.|...++++.||...+|+++++ ++|+ ..-++.| .+.. .|.+.|++++.
T Consensus 65 ~~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~g-~~~~-----------~l~~~l~~~~~ 112 (113)
T 1ti3_A 65 VDELKAVAEEWNVEAMPTFIFL-KDGK--LVDKTVG-ADKD-----------GLPTLVAKHAT 112 (113)
T ss_dssp TTTCHHHHHHHHCSSTTEEEEE-ETTE--EEEEEEC-CCTT-----------HHHHHHHHHHH
T ss_pred ccccHHHHHhCCCCcccEEEEE-eCCE--EEEEEec-CCHH-----------HHHHHHHHhhc
Confidence 3666789999999999999888 5773 2334556 3222 68888888774
No 129
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=96.52 E-value=0.0021 Score=37.51 Aligned_cols=44 Identities=16% Similarity=0.344 Sum_probs=33.5
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
.|++.++++.||...+|++++ +|+ +++.|..+.. .|++.|+.++
T Consensus 41 ~~~~~~~~~~~~v~~~Pt~~~---~G~----~~~~G~~~~~-----------~l~~~l~~~l 84 (85)
T 1nho_A 41 IMVDREKAIEYGLMAVPAIAI---NGV----VRFVGAPSRE-----------ELFEAINDEM 84 (85)
T ss_dssp TTTCGGGGGGTCSSCSSEEEE---TTT----EEEECSSCCH-----------HHHHHHHHHC
T ss_pred CCCCHHHHHhCCceeeCEEEE---CCE----EEEccCCCHH-----------HHHHHHHHHh
Confidence 356778999999999999998 773 4888864332 6777777765
No 130
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=96.50 E-value=0.0017 Score=39.28 Aligned_cols=49 Identities=27% Similarity=0.327 Sum_probs=35.4
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
.|...++++.||...+|+++++ ++|+ ..-+|.|..+ ...|.+.|+.++.
T Consensus 58 ~~~~~~~~~~~~v~~~Pt~~~~-~~g~--~~~~~~g~~~-----------~~~l~~~l~~~l~ 106 (109)
T 2yzu_A 58 VDENPKTAMRYRVMSIPTVILF-KDGQ--PVEVLVGAQP-----------KRNYQAKIEKHLP 106 (109)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEE-ETTE--EEEEEESCCC-----------HHHHHHHHHTTC-
T ss_pred CCCCHhHHHhCCCCcCCEEEEE-eCCc--EeeeEeCCCC-----------HHHHHHHHHHHhh
Confidence 4667789999999999999999 7774 2335666532 3468888877664
No 131
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=96.42 E-value=0.0038 Score=37.61 Aligned_cols=48 Identities=19% Similarity=0.288 Sum_probs=34.2
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
.|+..++++.||...+|+++++ ++|+ ..-++.|..+ ...+.+.|+++|
T Consensus 58 ~~~~~~~~~~~~v~~~Pt~~~~-~~g~--~~~~~~G~~~-----------~~~l~~~l~~~l 105 (105)
T 1fb6_A 58 TDEAPGIATQYNIRSIPTVLFF-KNGE--RKESIIGAVP-----------KSTLTDSIEKYL 105 (105)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEE-ETTE--EEEEEEECCC-----------HHHHHHHHHHHC
T ss_pred CcchHHHHHhCCCCcccEEEEE-eCCe--EEEEEecCCC-----------HHHHHHHHHhhC
Confidence 4667789999999999997777 5774 3445667543 336777777654
No 132
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=96.37 E-value=0.0046 Score=38.63 Aligned_cols=49 Identities=14% Similarity=0.316 Sum_probs=35.9
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG 78 (97)
.|+..++++.||...+|+++++ ++|+ ..-+|.|.. ...|.+.|+.++..
T Consensus 73 ~~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~~------------~~~l~~~l~~~l~~ 121 (122)
T 2vlu_A 73 VDELKPIAEQFSVEAMPTFLFM-KEGD--VKDRVVGAI------------KEELTAKVGLHAAA 121 (122)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEE-ETTE--EEEEEESSC------------HHHHHHHHHHHHSC
T ss_pred CCCCHHHHHHcCCCcccEEEEE-eCCE--EEEEEeCcC------------HHHHHHHHHHHhcc
Confidence 3667789999999999997666 7774 233566643 23788889888765
No 133
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=96.36 E-value=0.0037 Score=40.71 Aligned_cols=54 Identities=15% Similarity=0.301 Sum_probs=39.7
Q ss_pred EEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCC
Q 034345 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQP 80 (97)
Q Consensus 13 vL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~ 80 (97)
+=.|+..++++.||...+|+++++ ++|+ ..-+|.|..+ ...|.+.|+.++...+
T Consensus 93 vd~~~~~~l~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~~~-----------~~~l~~~l~~~l~~~~ 146 (148)
T 3p2a_A 93 VNTEAEPALSTRFRIRSIPTIMLY-RNGK--MIDMLNGAVP-----------KAPFDNWLDEQLSRDP 146 (148)
T ss_dssp EETTTCHHHHHHTTCCSSSEEEEE-ETTE--EEEEESSCCC-----------HHHHHHHHHHHHHSCC
T ss_pred EECcCCHHHHHHCCCCccCEEEEE-ECCe--EEEEEeCCCC-----------HHHHHHHHHHHhcccC
Confidence 335778899999999999999888 4773 3445666532 4478888988887643
No 134
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=96.35 E-value=0.0025 Score=38.46 Aligned_cols=49 Identities=14% Similarity=0.220 Sum_probs=34.5
Q ss_pred EEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHH
Q 034345 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECV 75 (97)
Q Consensus 13 vL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~al 75 (97)
+=.|...++++.||...+|++++++ +|+ ..-+|.|..+ ...|.+.|+.+
T Consensus 57 v~~~~~~~~~~~~~v~~~Pt~~~~~-~G~--~~~~~~g~~~-----------~~~l~~~l~~~ 105 (106)
T 3die_A 57 LDVDENPSTAAKYEVMSIPTLIVFK-DGQ--PVDKVVGFQP-----------KENLAEVLDKH 105 (106)
T ss_dssp EETTTCHHHHHHTTCCSBSEEEEEE-TTE--EEEEEESCCC-----------HHHHHHHHHTT
T ss_pred EECCcCHHHHHhCCCcccCEEEEEe-CCe--EEEEEeCCCC-----------HHHHHHHHHHh
Confidence 3347788899999999999999996 773 3446667532 33677666554
No 135
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=96.32 E-value=0.007 Score=37.23 Aligned_cols=45 Identities=18% Similarity=0.273 Sum_probs=33.1
Q ss_pred ChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 17 ~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
+..++++.||...+|+ |+++++|+ ..-++.|. + ...|...|+.++
T Consensus 66 ~~~~~~~~~~v~~~Pt-~~~~~~G~--~~~~~~G~-~-----------~~~l~~~l~~~~ 110 (111)
T 2pu9_C 66 ENKTLAKELGIRVVPT-FKILKENS--VVGEVTGA-K-----------YDKLLEAIQAAR 110 (111)
T ss_dssp TTHHHHHHHCCSBSSE-EEEESSSS--EEEEEESS-C-----------HHHHHHHHHHHH
T ss_pred chHHHHHHcCCCeeeE-EEEEeCCc--EEEEEcCC-C-----------HHHHHHHHHHhh
Confidence 5679999999999999 67778885 33456664 1 236888887775
No 136
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=96.29 E-value=0.0051 Score=38.75 Aligned_cols=49 Identities=22% Similarity=0.394 Sum_probs=36.0
Q ss_pred EEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 13 vL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
+=.|+..++++.||...+|+++++ ++|+ ..-+|.|. + ...|++.|+.+|
T Consensus 68 vd~d~~~~l~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~-~-----------~~~l~~~l~~~l 116 (116)
T 3qfa_C 68 VDVDDCQDVASECEVKSMPTFQFF-KKGQ--KVGEFSGA-N-----------KEKLEATINELV 116 (116)
T ss_dssp EETTTTHHHHHHTTCCSSSEEEEE-SSSS--EEEEEESC-C-----------HHHHHHHHHHHC
T ss_pred EECCCCHHHHHHcCCccccEEEEE-eCCe--EEEEEcCC-C-----------HHHHHHHHHHhC
Confidence 334778899999999999998888 6775 35567775 2 236777777654
No 137
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=96.26 E-value=0.0049 Score=41.25 Aligned_cols=51 Identities=20% Similarity=0.186 Sum_probs=37.0
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~ 79 (97)
.|+.+++++.||...+|+++++ ++|+ ..-+|.|..+ ...|.+.|+.++..+
T Consensus 104 ~~~~~~l~~~~~i~~~Pt~~~~-~~G~--~~~~~~G~~~-----------~~~l~~~l~~~l~~~ 154 (155)
T 2ppt_A 104 TQAHPAVAGRHRIQGIPAFILF-HKGR--ELARAAGARP-----------ASELVGFVRGKLGAR 154 (155)
T ss_dssp TTTSTHHHHHTTCCSSSEEEEE-ETTE--EEEEEESCCC-----------HHHHHHHHHHHHC--
T ss_pred CCccHHHHHHcCCCcCCEEEEE-eCCe--EEEEecCCCC-----------HHHHHHHHHHHhccC
Confidence 4667789999999999999999 6774 2345777542 347888888887653
No 138
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=96.25 E-value=0.0036 Score=38.92 Aligned_cols=49 Identities=18% Similarity=0.276 Sum_probs=34.9
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
.|+..++++.||...+|+++++ ++|+ ..-+|.|..+ ...|.+.|+..+.
T Consensus 57 ~~~~~~l~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~~~-----------~~~l~~~l~~~~~ 105 (112)
T 2voc_A 57 VDENQETAGKYGVMSIPTLLVL-KDGE--VVETSVGFKP-----------KEALQELVNKHLL 105 (112)
T ss_dssp TTTCCSHHHHTTCCSBSEEEEE-ETTE--EEEEEESCCC-----------HHHHHHHHHTTSC
T ss_pred CCCCHHHHHHcCCCcccEEEEE-eCCE--EEEEEeCCCC-----------HHHHHHHHHHHHH
Confidence 4677899999999999999999 8884 2345666532 3356666655443
No 139
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=96.24 E-value=0.0018 Score=41.72 Aligned_cols=50 Identities=20% Similarity=0.402 Sum_probs=36.4
Q ss_pred EEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 13 vL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
+=.|...++++.||...+|+++++ ++|+ ..-+|.|..+ ...|.+.|+++|
T Consensus 73 vd~d~~~~l~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~~~-----------~~~l~~~l~~~l 122 (123)
T 1oaz_A 73 LNIDQNPGTAPKYGIRGIPTLLLF-KNGE--VAATKVGALS-----------KGQLKEFLDANL 122 (123)
T ss_dssp EETTSCTTTGGGGTCCBSSEEEEE-ESSS--EEEEEESCCC-----------HHHHHHHHTTTC
T ss_pred EECCCCHHHHHHcCCCccCEEEEE-ECCE--EEEEEeCCCC-----------HHHHHHHHHHHh
Confidence 335778899999999999999999 8885 3445777542 236777666554
No 140
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=96.17 E-value=0.0023 Score=37.35 Aligned_cols=44 Identities=18% Similarity=0.386 Sum_probs=32.7
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
.|++.++++.||...+|++++ +| ++++.|..+.. .|++.|+++|
T Consensus 42 ~~~~~~~~~~~~v~~~Pt~~~---~G----~~~~~G~~~~~-----------~l~~~l~~~l 85 (85)
T 1fo5_A 42 VMENPQKAMEYGIMAVPTIVI---NG----DVEFIGAPTKE-----------ALVEAIKKRL 85 (85)
T ss_dssp SSSSCCTTTSTTTCCSSEEEE---TT----EEECCSSSSSH-----------HHHHHHHHHC
T ss_pred CCCCHHHHHHCCCcccCEEEE---CC----EEeeecCCCHH-----------HHHHHHHHhC
Confidence 356778999999999999988 67 45788864322 6777776653
No 141
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=96.16 E-value=0.0061 Score=37.11 Aligned_cols=51 Identities=20% Similarity=0.426 Sum_probs=36.8
Q ss_pred EEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 13 vL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
+=.|...++++.||...+|+++++ ++|+ ...+|.|..+ ...|.+.|+.++.
T Consensus 60 vd~~~~~~l~~~~~v~~~Pt~~~~-~~g~--~~~~~~g~~~-----------~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 60 VDVEEEKTLFQRFSLKGVPQILYF-KDGE--YKGKMAGDVE-----------DDEVEQMIADVLE 110 (111)
T ss_dssp EETTTCHHHHHHTTCCSSCEEEEE-ETTE--EEEEEESSCC-----------HHHHHHHHHHHHH
T ss_pred EECCcChhHHHhcCCCcCCEEEEE-ECCE--EEEEEeccCC-----------HHHHHHHHHHHhc
Confidence 334777889999999999999999 5663 2446777532 3367777777653
No 142
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=96.13 E-value=0.00083 Score=43.83 Aligned_cols=50 Identities=24% Similarity=0.271 Sum_probs=36.5
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG 78 (97)
.|...++++.||...+|+++++ ++|+ ...+|.|..+ ...|.+.|+.++..
T Consensus 64 ~~~~~~l~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~~~-----------~~~l~~~l~~~l~~ 113 (140)
T 3hz4_A 64 IATNPWTAEKYGVQGTPTFKFF-CHGR--PVWEQVGQIY-----------PSILKNAVRDMLQH 113 (140)
T ss_dssp TTTCHHHHHHHTCCEESEEEEE-ETTE--EEEEEESSCC-----------HHHHHHHHHHHHHH
T ss_pred CCcCHhHHHHCCCCcCCEEEEE-eCCc--EEEEEcCCCC-----------HHHHHHHHHHHhcc
Confidence 4778899999999999988888 6774 2346777532 33677777777754
No 143
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=96.12 E-value=0.0086 Score=38.72 Aligned_cols=50 Identities=16% Similarity=0.141 Sum_probs=34.6
Q ss_pred eChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034345 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (97)
Q Consensus 16 D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~ 79 (97)
|+..++++.||...+|++++++ +|+ ..-++.|..+ ...++..|+.++.+.
T Consensus 79 d~~~~l~~~~~v~~~Pt~~~~~-~G~--~v~~~~G~~~-----------~~~~~~~i~~~~~~~ 128 (135)
T 3emx_A 79 SAARLEMNKAGVEGTPTLVFYK-EGR--IVDKLVGATP-----------WSLKVEKAREIYGGE 128 (135)
T ss_dssp HHHHHHHHHHTCCSSSEEEEEE-TTE--EEEEEESCCC-----------HHHHHHHHHHHC---
T ss_pred hhhHHHHHHcCCceeCeEEEEc-CCE--EEEEEeCCCC-----------HHHHHHHHHHHhCCC
Confidence 6788999999999999766666 774 4556777643 336777777777653
No 144
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=96.12 E-value=0.0044 Score=38.62 Aligned_cols=49 Identities=14% Similarity=0.407 Sum_probs=34.8
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
.|...++++.||...+|+++++ ++|+ ..-++.|..+- ..|+..|+..+.
T Consensus 58 ~~~~~~l~~~~~v~~~Pt~~~~-~~G~--~v~~~~G~~~~-----------~~l~~~~~~~~~ 106 (110)
T 2l6c_A 58 SEARPELMKELGFERVPTLVFI-RDGK--VAKVFSGIMNP-----------RELQALYASIHH 106 (110)
T ss_dssp GGGCHHHHHHTTCCSSCEEEEE-ESSS--EEEEEESCCCH-----------HHHHHHHHTC--
T ss_pred CcCCHHHHHHcCCcccCEEEEE-ECCE--EEEEEcCCCCH-----------HHHHHHHHHHhh
Confidence 3567789999999999999999 7885 35567776432 257776665443
No 145
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=96.10 E-value=0.0059 Score=38.63 Aligned_cols=48 Identities=23% Similarity=0.375 Sum_probs=34.9
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
.|...++++.||...+|++++++ +|+ ..-+|.|. + ...|++.|+++++
T Consensus 74 ~d~~~~~~~~~~v~~~Pt~~~~~-~G~--~~~~~~G~-~-----------~~~l~~~l~~~l~ 121 (121)
T 2j23_A 74 VDEQSQIAQEVGIRAMPTFVFFK-NGQ--KIDTVVGA-D-----------PSKLQAAITQHSA 121 (121)
T ss_dssp TTTCHHHHHHHTCCSSSEEEEEE-TTE--EEEEEESS-C-----------HHHHHHHHHHHTC
T ss_pred CcCCHHHHHHcCCCcccEEEEEE-CCe--EEeeEcCC-C-----------HHHHHHHHHHhhC
Confidence 45667899999999999988884 773 23456664 2 3378888887764
No 146
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=96.04 E-value=0.0059 Score=36.81 Aligned_cols=47 Identities=23% Similarity=0.374 Sum_probs=33.9
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
.|+..++++.||...+|+++++ ++|+ ..-+|.|. + ...|++.|+.+|
T Consensus 59 ~~~~~~~~~~~~v~~~Pt~~~~-~~g~--~~~~~~g~-~-----------~~~l~~~l~~~l 105 (105)
T 3m9j_A 59 VDDCQDVASESEVKSMPTFQFF-KKGQ--KVGEFSGA-N-----------KEKLEATINELV 105 (105)
T ss_dssp TTTCHHHHHHTTCCBSSEEEEE-ETTE--EEEEEESS-C-----------HHHHHHHHHHHC
T ss_pred hhhhHHHHHHcCCCcCcEEEEE-ECCe--EEEEEeCC-C-----------HHHHHHHHHHhC
Confidence 4667889999999999999999 5663 24456665 2 236777777653
No 147
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=95.03 E-value=0.0011 Score=39.86 Aligned_cols=36 Identities=22% Similarity=0.409 Sum_probs=28.0
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecC
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFD 53 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~ID 53 (97)
.|+..++++.||...+|+++++ ++|+ ...+|.|..+
T Consensus 59 ~~~~~~~~~~~~v~~~Pt~~~~-~~g~--~~~~~~g~~~ 94 (106)
T 2yj7_A 59 VDENPNTAAQYGIRSIPTLLLF-KNGQ--VVDRLVGAQP 94 (106)
Confidence 4677789999999999999999 6774 3446777653
No 148
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=95.99 E-value=0.0064 Score=38.88 Aligned_cols=48 Identities=21% Similarity=0.351 Sum_probs=33.6
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
.|+..++++.||...+|+++++ ++|+ ..-++.|. + ...|++.|+++++
T Consensus 77 ~d~~~~l~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~-~-----------~~~l~~~l~~~l~ 124 (124)
T 1xfl_A 77 TDELKSVASDWAIQAMPTFMFL-KEGK--ILDKVVGA-K-----------KDELQSTIAKHLA 124 (124)
T ss_dssp TTTSHHHHHHTTCCSSSEEEEE-ETTE--EEEEEESC-C-----------HHHHHHHHHHHCC
T ss_pred CccCHHHHHHcCCCccCEEEEE-ECCE--EEEEEeCC-C-----------HHHHHHHHHHhcC
Confidence 4667789999999999997766 7873 23345552 1 2368888887753
No 149
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=95.98 E-value=0.0048 Score=40.06 Aligned_cols=52 Identities=12% Similarity=0.140 Sum_probs=36.4
Q ss_pred EeChhhHHHHhCCccCceEEEE-ecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034345 15 LFQSQDVARDFGAACTPEFFLF-KKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvl-d~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG 78 (97)
.|+..++++.||...+|+++++ +++|++...-++.|. + ...|.+.|+.++..
T Consensus 78 ~~~~~~l~~~~~v~~~Pt~~~~~~~~g~g~~~~~~~G~-~-----------~~~l~~~l~~~l~~ 130 (133)
T 3cxg_A 78 VDIHPKLNDQHNIKALPTFEFYFNLNNEWVLVHTVEGA-N-----------QNDIEKAFQKYCLE 130 (133)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEEEEETTEEEEEEEEESC-C-----------HHHHHHHHHHHSEE
T ss_pred ccchHHHHHhcCCCCCCEEEEEEecCCCeEEEEEEcCC-C-----------HHHHHHHHHHHHHh
Confidence 4667789999999999999999 566632112345553 2 33788888887753
No 150
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=95.96 E-value=0.0086 Score=37.18 Aligned_cols=49 Identities=24% Similarity=0.334 Sum_probs=35.9
Q ss_pred EEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 13 vL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
+=.|...++++.||...+|++++++ +|+ ...++.|. + ...|++.|+.++
T Consensus 61 vd~~~~~~l~~~~~v~~~Pt~~~~~-~G~--~~~~~~G~-~-----------~~~l~~~i~~~l 109 (109)
T 3f3q_A 61 LDVDELGDVAQKNEVSAMPTLLLFK-NGK--EVAKVVGA-N-----------PAAIKQAIAANA 109 (109)
T ss_dssp EETTTCHHHHHHTTCCSSSEEEEEE-TTE--EEEEEESS-C-----------HHHHHHHHHHHC
T ss_pred EECCCCHHHHHHcCCCccCEEEEEE-CCE--EEEEEeCC-C-----------HHHHHHHHHhhC
Confidence 3457788999999999999999998 774 34556665 1 236888777653
No 151
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=95.95 E-value=0.0082 Score=35.98 Aligned_cols=47 Identities=21% Similarity=0.363 Sum_probs=32.3
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
.|...++++.||...+|++++++ +|+ ..-++.| .+ ...|++.|+++|
T Consensus 58 ~~~~~~~~~~~~v~~~Pt~~~~~-~g~--~~~~~~G-~~-----------~~~l~~~l~~~l 104 (104)
T 2vim_A 58 VDQNEEAAAKYSVTAMPTFVFIK-DGK--EVDRFSG-AN-----------ETKLRETITRHK 104 (104)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEEE-TTE--EEEEEES-SC-----------HHHHHHHHHHHC
T ss_pred ccCCHHHHHHcCCccccEEEEEe-CCc--EEEEEeC-CC-----------HHHHHHHHHhhC
Confidence 35567899999999999977775 773 2345556 22 236888887654
No 152
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=95.92 E-value=0.0027 Score=39.43 Aligned_cols=50 Identities=22% Similarity=0.311 Sum_probs=34.1
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG 78 (97)
.|+..++++.||...+|+++++. +|+ ...+|.|..+ ...|.+.|+.++++
T Consensus 70 ~~~~~~~~~~~~i~~~Pt~~~~~-~g~--~~~~~~G~~~-----------~~~l~~~l~~~l~~ 119 (121)
T 2i1u_A 70 VDTNPETARNFQVVSIPTLILFK-DGQ--PVKRIVGAKG-----------KAALLRELSDVVPN 119 (121)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEEE-TTE--EEEEEESCCC-----------HHHHHHHTCSCCCC
T ss_pred CCCCHHHHHhcCCCcCCEEEEEE-CCE--EEEEecCCCC-----------HHHHHHHHHHHHhh
Confidence 46678899999999999988885 773 2345666532 23577666655543
No 153
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=95.88 E-value=0.0026 Score=42.48 Aligned_cols=30 Identities=20% Similarity=0.243 Sum_probs=24.4
Q ss_pred HHHhCCccCceEEEEecCCCCCeeEEEeeecC
Q 034345 22 ARDFGAACTPEFFLFKKDGRRPFQLVYHGQFD 53 (97)
Q Consensus 22 a~a~gA~~TPe~fvld~~g~~~~~l~Y~G~ID 53 (97)
++.||...+|+.++||++|+ +.-++.|..+
T Consensus 123 ~~~~~v~~~Pt~~lid~~G~--~~~~~~G~~~ 152 (172)
T 3f9u_A 123 RVKFGANAQPFYVLIDNEGN--PLNKSYAYDE 152 (172)
T ss_dssp HHHHSCCCSSEEEEECTTSC--BSSCCBCSCC
T ss_pred HHHcCCCCcceEEEECCCCC--EEeeccCCCC
Confidence 79999999999999999995 3445567654
No 154
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=95.86 E-value=0.014 Score=38.47 Aligned_cols=52 Identities=13% Similarity=0.247 Sum_probs=38.2
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v 81 (97)
.|+..++++.||...+|++++++ +|+ ..-++.|. + ...|.+.|+.++.....
T Consensus 71 ~~~~~~l~~~~~v~~~Pt~~~~~-~G~--~~~~~~G~-~-----------~~~l~~~i~~~l~~~~~ 122 (153)
T 2wz9_A 71 AEGVPEVSEKYEISSVPTFLFFK-NSQ--KIDRLDGA-H-----------APELTKKVQRHASSGSF 122 (153)
T ss_dssp TTTSHHHHHHTTCCSSSEEEEEE-TTE--EEEEEESS-C-----------HHHHHHHHHHHSCTTSS
T ss_pred CCCCHHHHHHcCCCCCCEEEEEE-CCE--EEEEEeCC-C-----------HHHHHHHHHHHhccccC
Confidence 46677899999999999999999 884 23345552 1 23688999998876443
No 155
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=95.77 E-value=0.012 Score=36.12 Aligned_cols=49 Identities=24% Similarity=0.379 Sum_probs=34.6
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG 78 (97)
.|...++++.||...+|+++++ ++|+ ..-++.|. + ...|.+.|+.+++.
T Consensus 67 ~~~~~~~~~~~~v~~~Pt~~~~-~~g~--~~~~~~g~-~-----------~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 67 VDELKDVAEAYNVEAMPTFLFI-KDGE--KVDSVVGG-R-----------KDDIHTKIVALMGS 115 (118)
T ss_dssp TTTSHHHHHHTTCCSBSEEEEE-ETTE--EEEEEESC-C-----------HHHHHHHHHHHHC-
T ss_pred cccCHHHHHHcCCCcCcEEEEE-eCCe--EEEEecCC-C-----------HHHHHHHHHHHhcc
Confidence 4666789999999999998887 6773 23345552 1 33788888888764
No 156
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=95.76 E-value=0.0032 Score=42.53 Aligned_cols=40 Identities=15% Similarity=0.184 Sum_probs=24.6
Q ss_pred cCce----EEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 29 CTPE----FFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 29 ~TPe----~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
.+|. .||||++|+ ++-+|.|..+... =...++.+|+++++
T Consensus 131 ~~p~~~~~~~lid~~G~--i~~~~~g~~~~~~-------l~~~i~~lL~~~~~ 174 (180)
T 3kij_A 131 KEPRWNFWKYLVNPEGQ--VVKFWRPEEPIEV-------IRPDIAALVRQVII 174 (180)
T ss_dssp CCCSSTTCEEEECTTSC--EEEEECTTCCGGG-------THHHHHHHHHHHHH
T ss_pred CCccccceEEEECCCCC--EEEEECCCCCHHH-------HHHHHHHHHHHHhc
Confidence 4788 999999995 4445556543321 13456666666654
No 157
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=95.75 E-value=0.0082 Score=36.11 Aligned_cols=47 Identities=17% Similarity=0.396 Sum_probs=31.8
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
.|...++++.||...+|+++++ ++|+ ..-+|.| .+ ...|.+.|+++|
T Consensus 60 ~~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~g-~~-----------~~~l~~~i~~~l 106 (106)
T 1xwb_A 60 VDECEDIAMEYNISSMPTFVFL-KNGV--KVEEFAG-AN-----------AKRLEDVIKANI 106 (106)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEE-ETTE--EEEEEES-CC-----------HHHHHHHHHHTC
T ss_pred ccchHHHHHHcCCCcccEEEEE-cCCc--EEEEEcC-CC-----------HHHHHHHHHHhC
Confidence 4566789999999999996666 6773 2345556 22 235777776653
No 158
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=95.72 E-value=0.0055 Score=37.56 Aligned_cols=50 Identities=20% Similarity=0.252 Sum_probs=27.4
Q ss_pred EEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 13 vL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
+=.|...++++.||...+|++++++ +|+ ..-++.|..+ ...|.+.|+.++
T Consensus 55 vd~~~~~~l~~~~~v~~~Pt~~~~~-~G~--~~~~~~g~~~-----------~~~l~~~l~~~~ 104 (105)
T 4euy_A 55 ILLQDMQEIAGRYAVFTGPTVLLFY-NGK--EILRESRFIS-----------LENLERTIQLFE 104 (105)
T ss_dssp EEECCC---------CCCCEEEEEE-TTE--EEEEEESSCC-----------HHHHHHHHHTTC
T ss_pred EECCCCHHHHHhcCCCCCCEEEEEe-CCe--EEEEEeCCcC-----------HHHHHHHHHHhh
Confidence 3457888999999999999999995 774 3445667542 336777776554
No 159
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.72 E-value=0.0049 Score=38.90 Aligned_cols=48 Identities=21% Similarity=0.211 Sum_probs=36.1
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
.|...++++.||...+|+++++ ++|+ ..+|.|.. +...|.+.|+.++.
T Consensus 63 ~~~~~~~~~~~~v~~~Pt~~~~-~~G~---~~~~~G~~-----------~~~~l~~~l~~~~~ 110 (126)
T 1x5e_A 63 VTEQPGLSGRFIINALPTIYHC-KDGE---FRRYQGPR-----------TKKDFINFISDKEW 110 (126)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEE-ETTE---EEECCSCC-----------CHHHHHHHHHTCGG
T ss_pred CcCCHHHHHHcCCcccCEEEEE-eCCe---EEEeecCC-----------CHHHHHHHHHHHhh
Confidence 4677889999999999999999 7773 45666643 24478888877653
No 160
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=95.71 E-value=0.012 Score=37.93 Aligned_cols=48 Identities=10% Similarity=0.189 Sum_probs=34.9
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
.|+..++++.||...+|+++++ ++|+ ..-+|.| .+ ...|.+.|+.++.
T Consensus 76 ~d~~~~l~~~~~v~~~Pt~~i~-~~G~--~~~~~~G-~~-----------~~~l~~~l~~~l~ 123 (125)
T 1r26_A 76 ADNNSEIVSKCRVLQLPTFIIA-RSGK--MLGHVIG-AN-----------PGMLRQKLRDIIK 123 (125)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEE-ETTE--EEEEEES-SC-----------HHHHHHHHHHHHH
T ss_pred CCCCHHHHHHcCCCcccEEEEE-eCCe--EEEEEeC-CC-----------HHHHHHHHHHHhc
Confidence 4667889999999999997766 7774 2335666 22 2368888888875
No 161
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=95.70 E-value=0.01 Score=36.93 Aligned_cols=46 Identities=17% Similarity=0.215 Sum_probs=31.9
Q ss_pred eChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 16 D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
|...++++.||...+|+++++ ++|+ ..-++.| .+ ...|++.|+.+|
T Consensus 72 ~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~G-~~-----------~~~l~~~l~~~l 117 (117)
T 2xc2_A 72 DKLEETARKYNISAMPTFIAI-KNGE--KVGDVVG-AS-----------IAKVEDMIKKFI 117 (117)
T ss_dssp TTSHHHHHHTTCCSSSEEEEE-ETTE--EEEEEES-SC-----------HHHHHHHHHHHC
T ss_pred CccHHHHHHcCCCccceEEEE-eCCc--EEEEEeC-CC-----------HHHHHHHHHHhC
Confidence 566789999999999997666 6773 2334556 22 236777777653
No 162
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=95.68 E-value=0.0059 Score=38.10 Aligned_cols=54 Identities=11% Similarity=0.063 Sum_probs=40.2
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG 78 (97)
.|+..++++.||...+|++++++++|. ..+|.|.--. ..+...|.+.|+.+++.
T Consensus 61 ~~~~~~~~~~~~v~~~Pt~~~~~~~~~---~~~~~g~~~~-------~~~~~~l~~~l~~~l~~ 114 (122)
T 3aps_A 61 CQAYPQTCQKAGIKAYPSVKLYQYERA---KKSIWEEQIN-------SRDAKTIAALIYGKLET 114 (122)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEEEEEGG---GTEEEEEEEC-------CSCHHHHHHHHHHHHHC
T ss_pred CcCCHHHHHHcCCCccceEEEEeCCCc---cceeeccccC-------cCCHHHHHHHHHHHHHh
Confidence 356778999999999999999998874 5677886211 11345788888888864
No 163
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=95.58 E-value=0.02 Score=40.05 Aligned_cols=37 Identities=11% Similarity=0.077 Sum_probs=31.2
Q ss_pred ceeEEEeChhhHHHHhCCcc-----------CceEEEEecCCCCCeeEEEeee
Q 034345 10 MWLITLFQSQDVARDFGAAC-----------TPEFFLFKKDGRRPFQLVYHGQ 51 (97)
Q Consensus 10 ~fpvL~D~~q~va~a~gA~~-----------TPe~fvld~~g~~~~~l~Y~G~ 51 (97)
+||+|-|++++++++||... .-.+|||| +| +++|.-.
T Consensus 103 ~f~lLSD~~~~~a~ayGv~~~~~~~g~g~~~~R~tfvId-dG----~V~~~~v 150 (171)
T 2xhf_A 103 KIRMLADMHGEFTRALGTELDSSKMLGNNRSRRYAMLID-DN----KIRSVST 150 (171)
T ss_dssp CSEEEECTTSHHHHHHTCBCCCHHHHSSCCBCCEEEEEE-TT----EEEEEEE
T ss_pred CeEEEEeCCchHHHHhCCceeccccCCCcceEEEEEEEe-CC----EEEEEEE
Confidence 89999999999999999752 24679998 88 7888864
No 164
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=95.49 E-value=0.016 Score=40.11 Aligned_cols=54 Identities=15% Similarity=0.223 Sum_probs=40.7
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCCC
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVS 82 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v~ 82 (97)
.|...++++.||...+|+++++ ++|+ ...+|.|.. +...|.+.|+.++......
T Consensus 154 ~~~~~~l~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~~-----------~~~~l~~~i~~~l~~~~~~ 207 (210)
T 3apq_A 154 CGDDRMLCRMKGVNSYPSLFIF-RSGM--AAVKYNGDR-----------SKESLVAFAMQHVRSTVTE 207 (210)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEE-CTTS--CCEECCSCC-----------CHHHHHHHHHHHHHCCSSC
T ss_pred CCccHHHHHHcCCCcCCeEEEE-ECCC--ceeEecCCC-----------CHHHHHHHHHHhCccccee
Confidence 3677789999999999999999 7775 355677743 2447889999888765443
No 165
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=95.30 E-value=0.013 Score=36.22 Aligned_cols=47 Identities=17% Similarity=0.248 Sum_probs=32.1
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
.|+..++++.||...+|+++++ ++|+ ..-+|.|. + ...|++.|++++
T Consensus 65 ~~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~-~-----------~~~l~~~l~~~l 111 (112)
T 1syr_A 65 VDEVSEVTEKENITSMPTFKVY-KNGS--SVDTLLGA-N-----------DSALKQLIEKYA 111 (112)
T ss_dssp TTTTHHHHHHTTCCSSSEEEEE-ETTE--EEEEEESC-C-----------HHHHHHHHHTTC
T ss_pred CCCCHHHHHHcCCCcccEEEEE-ECCc--EEEEEeCC-C-----------HHHHHHHHHHhh
Confidence 3566789999999999986666 5773 23355664 2 236777777654
No 166
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=95.29 E-value=0.018 Score=35.32 Aligned_cols=48 Identities=15% Similarity=0.263 Sum_probs=33.7
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
.|...++++.||...+|+++++ ++|+ ..-+|.|. + ...|++.|+.+++
T Consensus 62 ~~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~-~-----------~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 62 ADENSEISELFEISAVPYFIII-HKGT--ILKELSGA-D-----------PKEYVSLLEDCKN 109 (112)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEE-ETTE--EEEEECSC-C-----------HHHHHHHHHHHHH
T ss_pred cccCHHHHHHcCCCcccEEEEE-ECCE--EEEEecCC-C-----------HHHHHHHHHHHHh
Confidence 3567789999999999998888 5773 23345553 1 1258888887765
No 167
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=95.29 E-value=0.022 Score=34.63 Aligned_cols=47 Identities=26% Similarity=0.323 Sum_probs=33.0
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
.|+..++++.||...+|+++++ ++|+ ..-+|.|. + ...|++.|+.++
T Consensus 60 ~~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~-~-----------~~~l~~~l~~~l 106 (107)
T 1gh2_A 60 VHQCQGTAATNNISATPTFQFF-RNKV--RIDQYQGA-D-----------AVGLEEKIKQHL 106 (107)
T ss_dssp TTTSHHHHHHTTCCSSSEEEEE-ETTE--EEEEEESS-C-----------HHHHHHHHHHHH
T ss_pred CccCHHHHHhcCCCcccEEEEE-ECCe--EEEEEeCC-C-----------HHHHHHHHHHhc
Confidence 4667789999999999998888 6773 23456663 1 124777777665
No 168
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=95.28 E-value=0.0071 Score=36.97 Aligned_cols=47 Identities=19% Similarity=0.319 Sum_probs=33.2
Q ss_pred ChhhHHHHhCCccCceEEEEecCCCCCee--EEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQ--LVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 17 ~~q~va~a~gA~~TPe~fvld~~g~~~~~--l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
...++++.||...+|+++++ ++|+ .. .+|.|..+ ...|.+.|+.++.
T Consensus 69 ~~~~~~~~~~v~~~Pt~~~~-~~g~--~~~~~~~~g~~~-----------~~~l~~~l~~~~~ 117 (120)
T 1mek_A 69 EESDLAQQYGVRGYPTIKFF-RNGD--TASPKEYTAGRE-----------ADDIVNWLKKRTG 117 (120)
T ss_dssp TCCSSHHHHTCCSSSEEEEE-ESSC--SSSCEECCCCSS-----------HHHHHHHHHTTSC
T ss_pred CCHHHHHHCCCCcccEEEEE-eCCC--cCCcccccCccC-----------HHHHHHHHHhccC
Confidence 45689999999999999999 5664 13 57777432 3367777766553
No 169
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=95.21 E-value=0.022 Score=35.59 Aligned_cols=45 Identities=18% Similarity=0.273 Sum_probs=31.3
Q ss_pred ChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 17 ~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
+..++++.||...+|+ |++.++|+ ..-++.|. + ...|.+.|++++
T Consensus 79 ~~~~~~~~~~v~~~Pt-~~~~~~G~--~~~~~~G~-~-----------~~~l~~~i~~~~ 123 (124)
T 1faa_A 79 ENKTLAKELGIRVVPT-FKILKENS--VVGEVTGA-K-----------YDKLLEAIQAAR 123 (124)
T ss_dssp TTHHHHHHHCCSSSSE-EEEEETTE--EEEEEESS-C-----------HHHHHHHHHHHT
T ss_pred chHHHHHHcCCCeeeE-EEEEeCCc--EEEEEcCC-C-----------HHHHHHHHHHhh
Confidence 4678999999999999 55667884 23345553 1 236888887765
No 170
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=95.21 E-value=0.0093 Score=37.36 Aligned_cols=50 Identities=20% Similarity=0.289 Sum_probs=35.6
Q ss_pred eChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCC
Q 034345 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQP 80 (97)
Q Consensus 16 D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~ 80 (97)
|..+++++.||...+|+++++ ++|+ ..-++.| .+. ..|.+.|+.++...+
T Consensus 76 ~~~~~~~~~~~v~~~Pt~~~~-~~g~--~~~~~~g-~~~-----------~~l~~~l~~~~~~~~ 125 (130)
T 1wmj_A 76 DELKEVAEKYNVEAMPTFLFI-KDGA--EADKVVG-ARK-----------DDLQNTIVKHVGATA 125 (130)
T ss_dssp TTSGGGHHHHTCCSSCCCCBC-TTTT--CCBCCCT-TCT-----------TTHHHHHHHHTSSSC
T ss_pred cchHHHHHHcCCCccceEEEE-eCCe--EEEEEeC-CCH-----------HHHHHHHHHHHhccC
Confidence 667889999999999997777 7774 2334455 221 258888888887644
No 171
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=95.17 E-value=0.017 Score=40.41 Aligned_cols=56 Identities=21% Similarity=0.415 Sum_probs=42.3
Q ss_pred EEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCC
Q 034345 14 TLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVSS 83 (97)
Q Consensus 14 L~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v~~ 83 (97)
=.|...++++.||...+|++++++ +|+ ...+|.|..+ ...|.+.|+.++++.....
T Consensus 69 d~d~~~~l~~~~~v~~~Pt~~~~~-~G~--~~~~~~G~~~-----------~~~l~~~l~~~l~~~~~~s 124 (222)
T 3dxb_A 69 NIDQNPGTAPKYGIRGIPTLLLFK-NGE--VAATKVGALS-----------KGQLKEFLDANLAGSAMES 124 (222)
T ss_dssp ETTTCTTTGGGGTCCSBSEEEEEE-TTE--EEEEEESCCC-----------HHHHHHHHHHHSCCSCCBC
T ss_pred ECCCCHHHHHHcCCCcCCEEEEEE-CCe--EEEEeccccC-----------hHHHHHHHHhhcccccccc
Confidence 346777899999999999998886 664 3457777643 4479999999998765543
No 172
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=95.16 E-value=0.031 Score=38.53 Aligned_cols=50 Identities=20% Similarity=0.282 Sum_probs=38.0
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~ 79 (97)
.|...++++.||...+|++++++. |. .+.|.|..+ ...+...|+.++...
T Consensus 75 ~~~~~~l~~~~~v~~~Pt~~~~~~-g~---~~~~~g~~~-----------~~~l~~~i~~~~~~~ 124 (241)
T 3idv_A 75 ATSASVLASRFDVSGYPTIKILKK-GQ---AVDYEGSRT-----------QEEIVAKVREVSQPD 124 (241)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEEET-TE---EEECCSCSC-----------HHHHHHHHHHHHSTT
T ss_pred ccCCHHHHHhcCCCcCCEEEEEcC-CC---cccccCccc-----------HHHHHHHHhhccCcc
Confidence 456778999999999999999974 42 677887543 346888888877654
No 173
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=94.81 E-value=0.073 Score=35.90 Aligned_cols=39 Identities=18% Similarity=0.323 Sum_probs=25.7
Q ss_pred ccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 28 ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 28 ~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
.++|.+||||++|+ ++-+|.|.-+.. ...|.+.|+.|+.
T Consensus 132 ~H~~~~~liD~~G~--i~~~~~g~~~~~---------~~~l~~~ik~Lle 170 (170)
T 4hde_A 132 IHGTSFYLIDQNGK--VMKKYSGISNTP---------YEDIIRDMKRLAE 170 (170)
T ss_dssp BCCCEEEEECTTSC--EEEEEESSSSCC---------HHHHHHHHHHHHC
T ss_pred EeeeEEEEEcCCCe--EEEEECCCCCCC---------HHHHHHHHHHHhC
Confidence 35789999999995 455577743222 3356667777763
No 174
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=94.68 E-value=0.033 Score=33.59 Aligned_cols=35 Identities=14% Similarity=0.295 Sum_probs=26.1
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeec
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQF 52 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~I 52 (97)
.|...++++.||...+|+++++ ++|+ ...+|.|..
T Consensus 64 ~~~~~~l~~~~~v~~~Pt~~~~-~~g~--~~~~~~g~~ 98 (111)
T 3uvt_A 64 CTAERNICSKYSVRGYPTLLLF-RGGK--KVSEHSGGR 98 (111)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEE-ETTE--EEEEECSCC
T ss_pred ccccHhHHHhcCCCcccEEEEE-eCCc--EEEeccCCc
Confidence 3566689999999999998888 5663 344677753
No 175
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=94.61 E-value=0.057 Score=38.03 Aligned_cols=43 Identities=19% Similarity=0.175 Sum_probs=35.7
Q ss_pred hhcceeEEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeec
Q 034345 7 LFLMWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQF 52 (97)
Q Consensus 7 ~~~~fpvL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~I 52 (97)
..+.++...|.+.++++.||.+..|.++||+++|+ ...|...+
T Consensus 183 ~~i~v~~~~~~~~~l~~~f~v~~~Pslvl~~~~g~---~~~~~~~~ 225 (244)
T 3q6o_A 183 KGVAVRRVLNTEANVVRKFGVTDFPSCYLLFRNGS---VSRVPVLM 225 (244)
T ss_dssp TTEEEEEEETTCHHHHHHHTCCCSSEEEEEETTSC---EEECCCSS
T ss_pred CceEEEEEeCchHHHHHHcCCCCCCeEEEEeCCCC---eEeecccc
Confidence 44667888888899999999999999999999996 66666443
No 176
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=94.55 E-value=0.039 Score=37.93 Aligned_cols=48 Identities=10% Similarity=0.261 Sum_probs=34.9
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
.|+..++++.||...+|+++++ ++|+ ...+|.|..+ ...|.+.|+.++
T Consensus 178 ~~~~~~l~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~~~-----------~~~l~~~l~~~l 225 (226)
T 1a8l_A 178 AIEYPEWADQYNVMAVPKIVIQ-VNGE--DRVEFEGAYP-----------EKMFLEKLLSAL 225 (226)
T ss_dssp GGGCHHHHHHTTCCSSCEEEEE-ETTE--EEEEEESCCC-----------HHHHHHHHHHHH
T ss_pred cccCHHHHHhCCCcccCeEEEE-eCCc--eeEEEcCCCC-----------HHHHHHHHHHhh
Confidence 4566789999999999997777 5774 3667888643 235777777665
No 177
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=94.49 E-value=0.042 Score=34.55 Aligned_cols=52 Identities=8% Similarity=0.142 Sum_probs=37.0
Q ss_pred eChhhHHHHhCCccCceEEEEecCCCCCeeEEEeee-cCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034345 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQ-FDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (97)
Q Consensus 16 D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~-IDd~~~~~~~~~t~~~L~~Ai~alLaG~ 79 (97)
|....+++.|+...+|+++++++.+.. ..+.|.|. .+.. .|...|+.++...
T Consensus 68 ~~~~~~~~~~~v~~~Pt~~~~~~g~~~-~~~~~~gg~~~~~-----------~l~~~l~~~~~~~ 120 (133)
T 2dj3_A 68 TANDITNDQYKVEGFPTIYFAPSGDKK-NPIKFEGGNRDLE-----------HLSKFIDEHATKR 120 (133)
T ss_dssp TTSCCCCSSCCCSSSSEEEEECTTCTT-SCEECCSSCCSTT-----------HHHHHHHHHSSSC
T ss_pred CcCHHHHhhcCCCcCCEEEEEeCCCcc-cceEecCCCcCHH-----------HHHHHHHHhcccc
Confidence 345677889999999999999987642 13567743 3322 6888888887654
No 178
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=94.38 E-value=0.033 Score=35.29 Aligned_cols=36 Identities=19% Similarity=0.309 Sum_probs=27.6
Q ss_pred EEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeee
Q 034345 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQ 51 (97)
Q Consensus 13 vL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~ 51 (97)
+=.|...++++.||...+|+++++ ++|+ ...+|.|.
T Consensus 80 vd~d~~~~l~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~ 115 (128)
T 3ul3_B 80 VDLDKNESLARKFSVKSLPTIILL-KNKT--MLARKDHF 115 (128)
T ss_dssp EEGGGCHHHHHHTTCCSSSEEEEE-ETTE--EEEEESSC
T ss_pred EECCCCHHHHHHcCCCCcCEEEEE-ECCE--EEEEecCC
Confidence 445777899999999999999999 5774 34456664
No 179
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=94.26 E-value=0.041 Score=37.67 Aligned_cols=51 Identities=24% Similarity=0.352 Sum_probs=36.4
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~ 79 (97)
.|+.+++|..||....|+..+| ++|+ ..=+..|.. ....|.+.|+++++..
T Consensus 77 vDe~~~lA~~ygV~sIPTlilF-k~G~--~v~~~~G~~-----------~k~~l~~~i~~~l~~~ 127 (140)
T 2qgv_A 77 LEQSEAIGDRFGAFRFPATLVF-TGGN--YRGVLNGIH-----------PWAELINLMRGLVEPQ 127 (140)
T ss_dssp HHHHHHHHHHHTCCSSSEEEEE-ETTE--EEEEEESCC-----------CHHHHHHHHHHHHC--
T ss_pred CCCCHHHHHHcCCccCCEEEEE-ECCE--EEEEEecCC-----------CHHHHHHHHHHHhcCC
Confidence 5889999999999999999998 5663 233344432 2347888899888543
No 180
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=94.23 E-value=0.077 Score=35.12 Aligned_cols=60 Identities=22% Similarity=0.183 Sum_probs=37.5
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG 78 (97)
.|+..++++.|+...+|+++ ++++|+ ......|.-++.. -.+...+...|.+.|+.++.|
T Consensus 63 ~d~~~~l~~~~~v~~~Pt~~-~~~~G~--~v~~~~g~~~~~~-~~G~~~~~~~l~~~l~~~~~~ 122 (149)
T 3gix_A 63 VDQTAVYTQYFDISYIPSTV-FFFNGQ--HMKVDYGSPDHTK-FVGSFKTKQDFIDLIEVIYRG 122 (149)
T ss_dssp TTTCCHHHHHTTCCSSSEEE-EEETTE--EEEEECSSSCCSC-EESCCSSHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHcCCCccCeEE-EEECCe--EEEeecCCCCCCe-EeeecCCHHHHHHHHHHHHHH
Confidence 48889999999999999999 667774 1212233322221 111123456788888777644
No 181
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=94.14 E-value=0.044 Score=34.54 Aligned_cols=37 Identities=16% Similarity=0.183 Sum_probs=28.5
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeec
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQF 52 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~I 52 (97)
.|+..++++.|+...+|+++++++.+.. ....|.|..
T Consensus 78 ~~~~~~l~~~~~v~~~Pt~~~~~~g~~~-~~~~~~G~~ 114 (127)
T 3h79_A 78 GEKYPDVIERMRVSGFPTMRYYTRIDKQ-EPFEYSGQR 114 (127)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEECSSCSS-SCEECCSCC
T ss_pred ccccHhHHHhcCCccCCEEEEEeCCCCC-CceEecCCc
Confidence 3566789999999999999999887741 016788753
No 182
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=93.89 E-value=0.024 Score=36.72 Aligned_cols=53 Identities=15% Similarity=0.218 Sum_probs=37.0
Q ss_pred eChhhHHHHhCCcc--CceEEEEec-CCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCC
Q 034345 16 FQSQDVARDFGAAC--TPEFFLFKK-DGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQP 80 (97)
Q Consensus 16 D~~q~va~a~gA~~--TPe~fvld~-~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~ 80 (97)
|+.++++..||... .|++.+++. +|. . | ++... ...+...|++-|+++++|+-
T Consensus 63 d~~~~~a~~~gi~~~~iPtl~i~~~~~g~----~-~--~~~~~-----g~~~~~~l~~fi~~~l~Gkl 118 (133)
T 2djk_A 63 KAFGAHAGNLNLKTDKFPAFAIQEVAKNQ----K-F--PFDQE-----KEITFEAIKAFVDDFVAGKI 118 (133)
T ss_dssp TTTGGGTTTTTCCSSSSSEEEEECTTTCC----B-C--CCCSS-----SCCCHHHHHHHHHHHHHTCC
T ss_pred HHhHHHHHHcCCCcccCCEEEEEecCcCc----c-c--CCCCc-----cccCHHHHHHHHHHHHcCCc
Confidence 56678999999998 999999985 452 2 4 22100 11235589999999999864
No 183
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=93.84 E-value=0.039 Score=34.59 Aligned_cols=34 Identities=29% Similarity=0.418 Sum_probs=25.6
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeee
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQ 51 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~ 51 (97)
.|+..++++.||...+|+++++ ++|+ ..-+|.|.
T Consensus 69 ~~~~~~l~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~ 102 (114)
T 2oe3_A 69 VDESPDIAKECEVTAMPTFVLG-KDGQ--LIGKIIGA 102 (114)
T ss_dssp TTTCHHHHHHTTCCSBSEEEEE-ETTE--EEEEEESS
T ss_pred CCCCHHHHHHCCCCcccEEEEE-eCCe--EEEEEeCC
Confidence 3566789999999999998776 7774 23456665
No 184
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=93.74 E-value=0.021 Score=41.01 Aligned_cols=49 Identities=20% Similarity=0.365 Sum_probs=33.7
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
+|...++++.+|...||.+|+.+.+|+ ..+..|..+- ..|+++|+..+.
T Consensus 185 v~~~~~l~~~~gv~gtPt~vi~~~~G~---~~~~~G~~~~-----------~~L~~~l~~~~~ 233 (241)
T 1v58_A 185 LSDNEKLMDDLGANVTPAIYYMSKENT---LQQAVGLPDQ-----------KTLNIIMGNKLQ 233 (241)
T ss_dssp HHHHHHHHHHHTCCSSCEEEEEETTTE---EEEEESSCCH-----------HHHHHHTTC---
T ss_pred HHHHHHHHHHcCCCCCCEEEEECCCCC---EEEecCCCCH-----------HHHHHHHHHHHH
Confidence 466778899999999999999988882 2356776432 257666665543
No 185
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=93.68 E-value=0.042 Score=37.18 Aligned_cols=45 Identities=16% Similarity=0.261 Sum_probs=34.3
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
+|.+.++++++|.+.||++++ .+| + ...|..+-. .|+.+|++.+.
T Consensus 95 v~~~~~la~~~gI~gtPt~vi--~nG----~-~i~G~~~~~-----------~l~~~i~~~~~ 139 (147)
T 3gv1_A 95 VAETTSLGEQFGFNGTPTLVF--PNG----R-TQSGYSPMP-----------QLEEIIRKNQQ 139 (147)
T ss_dssp HHHHHHHHHHTTCCSSCEEEC--TTS----C-EEESCCCTT-----------HHHHHHHHTSC
T ss_pred HHHHHHHHHHhCCCccCEEEE--ECC----E-EeeCCCCHH-----------HHHHHHHHHHH
Confidence 366789999999999999998 466 3 466875443 68888877654
No 186
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=93.56 E-value=0.086 Score=35.92 Aligned_cols=51 Identities=18% Similarity=0.167 Sum_probs=36.3
Q ss_pred EEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 13 vL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
|=.|+.+++|..||....|+..+| ++|+ ..=+..|..+ ...|.+.|+++++
T Consensus 73 VdvDe~~~la~~ygV~siPTlilF-kdG~--~v~~~vG~~~-----------k~~l~~~l~~~l~ 123 (137)
T 2qsi_A 73 VAAEAERGLMARFGVAVCPSLAVV-QPER--TLGVIAKIQD-----------WSSYLAQIGAMLA 123 (137)
T ss_dssp ECGGGHHHHHHHHTCCSSSEEEEE-ECCE--EEEEEESCCC-----------HHHHHHHHHHHHH
T ss_pred EECCCCHHHHHHcCCccCCEEEEE-ECCE--EEEEEeCCCC-----------HHHHHHHHHHHhc
Confidence 335889999999999999999999 5663 2333444432 3367778887773
No 187
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=93.55 E-value=0.11 Score=29.53 Aligned_cols=28 Identities=25% Similarity=0.415 Sum_probs=23.4
Q ss_pred hhhHHHHhCCccCceEEEEecCCCCCeeEEEeeec
Q 034345 18 SQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQF 52 (97)
Q Consensus 18 ~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~I 52 (97)
+.+++++||...+|++++ +| +++++|..
T Consensus 39 ~~~~~~~~~v~~~Pt~~~---~G----~~~~~G~~ 66 (77)
T 1ilo_A 39 EMDQILEAGLTALPGLAV---DG----ELKIMGRV 66 (77)
T ss_dssp SHHHHHHHTCSSSSCEEE---TT----EEEECSSC
T ss_pred CHHHHHHCCCCcCCEEEE---CC----EEEEcCCC
Confidence 778999999999999988 67 67677754
No 188
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=93.30 E-value=0.2 Score=34.49 Aligned_cols=35 Identities=14% Similarity=0.352 Sum_probs=28.4
Q ss_pred eChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecC
Q 034345 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFD 53 (97)
Q Consensus 16 D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~ID 53 (97)
|+.+++++.||...+|++.+++. |. ...+|.|..+
T Consensus 68 ~~~~~l~~~~~v~~~Ptl~~~~~-~~--~~~~~~G~~~ 102 (229)
T 2ywm_A 68 FTHKEETEKYGVDRVPTIVIEGD-KD--YGIRYIGLPA 102 (229)
T ss_dssp TTCHHHHHHTTCCBSSEEEEESS-SC--CCEEEESCCC
T ss_pred cccHHHHHHcCCCcCcEEEEECC-Cc--ccceecCCcc
Confidence 46789999999999999999964 32 3789999743
No 189
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=93.29 E-value=0.081 Score=34.72 Aligned_cols=60 Identities=13% Similarity=0.149 Sum_probs=37.4
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG 78 (97)
.|+..++++.||...+|++++++ +|+ ..-+..|.-++... .+...+...+.+.|+++++|
T Consensus 63 ~d~~~~~~~~~~i~~~Pt~~~~~-~G~--~v~~~~g~~~~~~~-~g~~~~~~~l~~~i~~~~~~ 122 (142)
T 1qgv_A 63 ITEVPDFNKMYELYDPCTVMFFF-RNK--HIMIDLGTGNNNKI-NWAMEDKQEMVDIIETVYRG 122 (142)
T ss_dssp TTTCCTTTTSSCSCSSCEEEEEE-TTE--EEEEECC------C-CSCCSCHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHcCCCCCCEEEEEE-CCc--EEEEecCCCCccee-eeecCcHHHHHHHHHHHHHH
Confidence 46778899999999999999995 563 12223454443321 12222356888889988876
No 190
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=93.13 E-value=0.098 Score=34.64 Aligned_cols=24 Identities=25% Similarity=0.668 Sum_probs=20.8
Q ss_pred HHHHhCCcc-CceEEEEecCCCCCeeEEEe
Q 034345 21 VARDFGAAC-TPEFFLFKKDGRRPFQLVYH 49 (97)
Q Consensus 21 va~a~gA~~-TPe~fvld~~g~~~~~l~Y~ 49 (97)
+|..||.+. .|+++|+ ++| +++|+
T Consensus 72 IA~~~~V~h~sPq~il~-k~G----~~v~~ 96 (112)
T 3iv4_A 72 IAKKTNVKHESPQAFYF-VNG----EMVWN 96 (112)
T ss_dssp HHHHHTCCCCSSEEEEE-ETT----EEEEE
T ss_pred HHHHhCCccCCCeEEEE-ECC----EEEEE
Confidence 899999995 9999999 677 67776
No 191
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=93.06 E-value=0.072 Score=38.04 Aligned_cols=36 Identities=25% Similarity=0.404 Sum_probs=28.7
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecC
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFD 53 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~ID 53 (97)
.|+..++++.||...+|+++++ ++|+ ..-+|.|..+
T Consensus 66 ~~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~g~~~ 101 (287)
T 3qou_A 66 CDAEQMIAAQFGLRAIPTVYLF-QNGQ--PVDGFQGPQP 101 (287)
T ss_dssp TTTCHHHHHTTTCCSSSEEEEE-ETTE--EEEEEESCCC
T ss_pred CccCHHHHHHcCCCCCCeEEEE-ECCE--EEEEeeCCCC
Confidence 4677899999999999999999 5774 3456888754
No 192
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=93.03 E-value=0.055 Score=38.85 Aligned_cols=57 Identities=16% Similarity=0.196 Sum_probs=39.0
Q ss_pred hhhHHHH-hCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCCC
Q 034345 18 SQDVARD-FGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVS 82 (97)
Q Consensus 18 ~q~va~a-~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v~ 82 (97)
+.+.|++ +|.+.||.+||.+.+|+ .+.|+.+-..+ + ..+-..++++|+.+++...|.
T Consensus 159 ~~~~a~~~~GV~GtPtfvv~~~nG~-----~~~Ga~~~~~~-G--~~~~e~l~~~I~~~l~~~~~~ 216 (226)
T 3f4s_A 159 DKSLAINKLGITAVPIFFIKLNDDK-----SYIEHNKVKHG-G--YKELKYFTNVIDKLYGKAIVK 216 (226)
T ss_dssp HHHHHHHHHCCCSSCEEEEEECCTT-----CCCCGGGGEEE-S--CCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCEEEEEcCCCE-----EeeCCCCcccc-c--ccCHHHHHHHHHHHHhcCCcc
Confidence 4567788 99999999999998883 35677651100 0 112457999999998765443
No 193
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=92.92 E-value=0.061 Score=33.79 Aligned_cols=47 Identities=21% Similarity=0.308 Sum_probs=32.6
Q ss_pred EeChhhHHHHhCCccCceEEEEecC---CCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHH
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKD---GRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECV 75 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~---g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~al 75 (97)
.|+..++++.||...+|++++++.+ |+ ..-++.|.. ...|+.+|+..
T Consensus 62 ~~~~~~~~~~~~i~~~Pt~~~~~~~~~~G~--~~~~~~G~~------------~~~l~~~~~~~ 111 (118)
T 2f51_A 62 VDKNGNAADAYGVSSIPALFFVKKEGNEIK--TLDQFVGAD------------VSRIKADIEKF 111 (118)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEEEEETTEEE--EEEEEESCC------------HHHHHHHHHHH
T ss_pred CCCCHHHHHhcCCCCCCEEEEEeCCCCcce--EEEeecCCC------------HHHHHHHHHHh
Confidence 4667889999999999999999873 42 233455542 22477776654
No 194
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=92.83 E-value=0.1 Score=32.83 Aligned_cols=34 Identities=29% Similarity=0.545 Sum_probs=25.7
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeee
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQ 51 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~ 51 (97)
.|+..++++.||....|+++++ ++|+ ..-++.|+
T Consensus 59 ~d~~~~l~~~~~V~~~PT~~~~-~~G~--~v~~~~G~ 92 (105)
T 3zzx_A 59 VDECEDIAQDNQIACMPTFLFM-KNGQ--KLDSLSGA 92 (105)
T ss_dssp TTTCHHHHHHTTCCBSSEEEEE-ETTE--EEEEEESC
T ss_pred cccCHHHHHHcCCCeecEEEEE-ECCE--EEEEEeCc
Confidence 4678899999999999987777 6774 23455663
No 195
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=92.68 E-value=0.14 Score=34.34 Aligned_cols=63 Identities=10% Similarity=0.210 Sum_probs=39.1
Q ss_pred EEEeChhh-HHHHhCC--ccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034345 13 ITLFQSQD-VARDFGA--ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (97)
Q Consensus 13 vL~D~~q~-va~a~gA--~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG 78 (97)
|=.|.... +++.|+. ..+|+++++|++|+ +.-++.|........ -...+...|.+.|+.++..
T Consensus 84 v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~--~~~~~~G~~~~~~~~-~~~~~~~~l~~~l~~~l~~ 149 (164)
T 1sen_A 84 VNLEDEEEPKDEDFSPDGGYIPRILFLDPSGK--VHPEIINENGNPSYK-YFYVSAEQVVQGMKEAQER 149 (164)
T ss_dssp EEEEGGGSCSCGGGCTTCSCSSEEEEECTTSC--BCTTCCCTTSCTTST-TCCCSHHHHHHHHHHHHHH
T ss_pred EEecCCchHHHHHhcccCCcCCeEEEECCCCC--EEEEEeCCCCccchh-cccCCHHHHHHHHHHHHHh
Confidence 44566666 7889998 56999999999995 233456653322100 0123456777777777654
No 196
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=92.62 E-value=0.069 Score=37.37 Aligned_cols=44 Identities=18% Similarity=0.371 Sum_probs=33.0
Q ss_pred ChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034345 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (97)
Q Consensus 17 ~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~ 79 (97)
.+.+.++++|...||.+|| +| +. +.|+. +-..|+.+|+++++++
T Consensus 151 ~~~~~a~~~gV~gtPtfvv---nG----~~-~~G~~-----------~~e~l~~~i~~~~~~~ 194 (202)
T 3gha_A 151 KDSDLNQKMNIQATPTIYV---ND----KV-IKNFA-----------DYDEIKETIEKELKGK 194 (202)
T ss_dssp HHHHHHHHTTCCSSCEEEE---TT----EE-CSCTT-----------CHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCcCCEEEE---CC----EE-ecCCC-----------CHHHHHHHHHHHHHhh
Confidence 3456789999999999998 66 33 45542 2447999999998875
No 197
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=92.56 E-value=0.071 Score=35.40 Aligned_cols=44 Identities=20% Similarity=0.354 Sum_probs=32.3
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
++.+.+.++++|...||++|| +| + .+.|..+ ...|+++|+++++
T Consensus 130 v~~~~~~a~~~gv~gtPt~~i---~g----~-~~~G~~~-----------~~~l~~~i~~~l~ 173 (175)
T 3gyk_A 130 IAQSMALAQKLGFNGTPSFVV---ED----A-LVPGFVE-----------QSQLQDAVDRARK 173 (175)
T ss_dssp HHHHHHHHHHHTCCSSSEEEE---TT----E-EECSCCC-----------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCccCCEEEE---CC----E-EeeCCCC-----------HHHHHHHHHHHHh
Confidence 466778999999999998887 55 3 4567532 3378888888764
No 198
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=92.54 E-value=0.047 Score=33.84 Aligned_cols=47 Identities=15% Similarity=0.210 Sum_probs=30.9
Q ss_pred EEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034345 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (97)
Q Consensus 13 vL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG 78 (97)
|=+|++.+++..||.. .|.+++ .+|+ ... |.+| ...|+++|+..+..
T Consensus 32 vdid~~~~l~~~~g~~-vPtl~~--~~G~----~v~-g~~~-----------~~~L~~~l~~~~~~ 78 (87)
T 1ttz_A 32 VFIDDDAALESAYGLR-VPVLRD--PMGR----ELD-WPFD-----------APRLRAWLDAAPHA 78 (87)
T ss_dssp EECTTCHHHHHHHTTT-CSEEEC--TTCC----EEE-SCCC-----------HHHHHHHHHTCC--
T ss_pred EECCCCHHHHHHhCCC-cCeEEE--ECCE----EEe-CCCC-----------HHHHHHHHHHHHHH
Confidence 3345778999999997 999888 6673 333 6543 23677777665543
No 199
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=92.44 E-value=0.16 Score=36.23 Aligned_cols=44 Identities=23% Similarity=0.428 Sum_probs=34.1
Q ss_pred ChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034345 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (97)
Q Consensus 17 ~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG 78 (97)
..+++++.||...+|++|+ +| +++|.|..+ ...+.+.|+..+..
T Consensus 184 ~~~~~~~~~~V~~vPt~~i---~G----~~~~~G~~~-----------~~~l~~~l~~~~~~ 227 (243)
T 2hls_A 184 ENPDIADKYGVMSVPSIAI---NG----YLVFVGVPY-----------EEDFLDYVKSAAEG 227 (243)
T ss_dssp TCHHHHHHTTCCSSSEEEE---TT----EEEEESCCC-----------HHHHHHHHHHHHTT
T ss_pred cCHHHHHHcCCeeeCeEEE---CC----EEEEeCCCC-----------HHHHHHHHHHHhhc
Confidence 5578999999999999998 67 567999753 33677778777653
No 200
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=92.00 E-value=0.12 Score=35.50 Aligned_cols=46 Identities=20% Similarity=0.428 Sum_probs=33.0
Q ss_pred eChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 16 D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
..+.+.|+++|.+.||.++| +|+ ..+.+.|+.+ ...+.++|+.+++
T Consensus 139 ~~~~~~a~~~gv~GtPtfvv---ng~--~~v~~~Ga~~-----------~e~~~~~i~~ll~ 184 (185)
T 3feu_A 139 DNAKMLSEKSGISSVPTFVV---NGK--YNVLIGGHDD-----------PKQIADTIRYLLE 184 (185)
T ss_dssp HHHHHHHHHHTCCSSSEEEE---TTT--EEECGGGCSS-----------HHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCccCEEEE---CCE--EEEecCCCCC-----------HHHHHHHHHHHHh
Confidence 34567789999999999998 553 2344577643 3368889998875
No 201
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=91.99 E-value=0.12 Score=35.40 Aligned_cols=47 Identities=23% Similarity=0.310 Sum_probs=34.4
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
.|...++++.||...+|++++++. |+ .+.|.|..+ ...|.+.|...+
T Consensus 190 ~~~~~~l~~~~~v~~~Pt~~~~~~-g~---~~~~~g~~~-----------~~~l~~~l~~~~ 236 (241)
T 3idv_A 190 ATAETDLAKRFDVSGYPTLKIFRK-GR---PYDYNGPRE-----------KYGIVDYMIEQS 236 (241)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEEET-TE---EEECCSCCS-----------HHHHHHHHHHHT
T ss_pred CCCCHHHHHHcCCcccCEEEEEEC-Ce---EEEecCCCC-----------HHHHHHHHHhhh
Confidence 356778999999999999999975 53 667877532 346777776654
No 202
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=91.73 E-value=0.071 Score=36.01 Aligned_cols=45 Identities=11% Similarity=0.090 Sum_probs=29.1
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
++.+.+.++.+|...||+ |++ +| +....|.. +...|.++|+.+++
T Consensus 136 v~~~~~~a~~~gv~gtPt-~vi--ng----~~~~~g~~-----------~~~~l~~~i~~~l~ 180 (195)
T 2znm_A 136 ALKMQKLTEQYRIDSTPT-VIV--GG----KYRVIFNN-----------GFDGGVHTIKELVA 180 (195)
T ss_dssp HHHHHHHHHHTTCCSSSE-EEE--TT----TEEECCCS-----------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCe-EEE--CC----EEEEcCCC-----------CHHHHHHHHHHHHH
Confidence 455678899999999999 555 45 33344541 23356666666654
No 203
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=91.40 E-value=0.15 Score=29.83 Aligned_cols=30 Identities=17% Similarity=0.150 Sum_probs=24.1
Q ss_pred ChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecC
Q 034345 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFD 53 (97)
Q Consensus 17 ~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~ID 53 (97)
+..++++.||...+|.+|+ +| ++.+.|...
T Consensus 43 ~~~~~~~~~gv~~vPt~~i---~g----~~~~~G~~~ 72 (80)
T 2k8s_A 43 ARIAEAEKAGVKSVPALVI---DG----AAFHINFGA 72 (80)
T ss_dssp STHHHHHHHTCCEEEEEEE---TT----EEEEEEEEE
T ss_pred hhHHHHHHcCCCcCCEEEE---CC----EEEEeccCc
Confidence 3578899999999999887 66 677888753
No 204
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=91.15 E-value=0.12 Score=31.89 Aligned_cols=30 Identities=20% Similarity=0.445 Sum_probs=22.5
Q ss_pred hhHHHHhCCccCceEEEEecCCCCCeeEEEeee
Q 034345 19 QDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQ 51 (97)
Q Consensus 19 q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~ 51 (97)
+++++.||...+|++++++ +|+ ...++.|.
T Consensus 77 ~~~~~~~~i~~~Pt~~~~~-~G~--~~~~~~G~ 106 (118)
T 1zma_A 77 QAFRSRYGIPTVPGFVHIT-DGQ--INVRCDSS 106 (118)
T ss_dssp HHHHHHHTCCSSCEEEEEE-TTE--EEEECCTT
T ss_pred HHHHHHcCCCCCCeEEEEE-CCE--EEEEecCC
Confidence 5788999999999999995 663 24455553
No 205
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=91.13 E-value=0.21 Score=34.04 Aligned_cols=24 Identities=13% Similarity=0.148 Sum_probs=20.9
Q ss_pred hhhHHHHhCCccCceEEEEecC-CC
Q 034345 18 SQDVARDFGAACTPEFFLFKKD-GR 41 (97)
Q Consensus 18 ~q~va~a~gA~~TPe~fvld~~-g~ 41 (97)
..++++.|++..+|++++||++ |+
T Consensus 90 ~~~l~~~y~v~~~P~~~fld~~~G~ 114 (153)
T 2dlx_A 90 GQRYIQFYKLGDFPYVSILDPRTGQ 114 (153)
T ss_dssp HHHHHHHHTCCSSSEEEEECTTTCC
T ss_pred HHHHHHHcCCCCCCEEEEEeCCCCc
Confidence 3568899999999999999998 64
No 206
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=91.08 E-value=0.1 Score=35.32 Aligned_cols=46 Identities=7% Similarity=0.208 Sum_probs=31.3
Q ss_pred eChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 16 D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
+.+.+.++++|...||.++| +|+ ..+...|..+ ...|.++|+.+++
T Consensus 139 ~~~~~~a~~~gv~gtPt~~v---ng~--~~~~~~G~~~-----------~e~l~~~i~~l~~ 184 (192)
T 3h93_A 139 EKAKKLAMAYQVTGVPTMVV---NGK--YRFDIGSAGG-----------PEETLKLADYLIE 184 (192)
T ss_dssp HHHHHHHHHHTCCSSSEEEE---TTT--EEEEHHHHTS-----------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEEE---CCE--EEecccccCC-----------HHHHHHHHHHHHH
Confidence 45567889999999998877 563 1233337643 2368888888775
No 207
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.02 E-value=0.28 Score=31.18 Aligned_cols=37 Identities=16% Similarity=0.225 Sum_probs=29.3
Q ss_pred eChhhHHHHhCCc------cCceEEEEecCCCCCeeEEEeeecCCC
Q 034345 16 FQSQDVARDFGAA------CTPEFFLFKKDGRRPFQLVYHGQFDDS 55 (97)
Q Consensus 16 D~~q~va~a~gA~------~TPe~fvld~~g~~~~~l~Y~G~IDd~ 55 (97)
|+..++++.|+.. .+|+++++ ++|+ ..-++.|..+..
T Consensus 68 ~~~~~~~~~~~v~~~~~~~~~Pt~~~~-~~G~--~~~~~~G~~~~~ 110 (137)
T 2dj0_A 68 GRYTDVSTRYKVSTSPLTKQLPTLILF-QGGK--EAMRRPQIDKKG 110 (137)
T ss_dssp TTCHHHHHHTTCCCCSSSSCSSEEEEE-SSSS--EEEEESCBCSSS
T ss_pred ccCHHHHHHccCcccCCcCCCCEEEEE-ECCE--EEEEecCcCchH
Confidence 5677899999998 99999999 5674 355688887654
No 208
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=90.90 E-value=0.19 Score=33.11 Aligned_cols=46 Identities=15% Similarity=0.208 Sum_probs=29.8
Q ss_pred ChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034345 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (97)
Q Consensus 17 ~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG 78 (97)
.+.+.|+.+|.+.||.+|| +|+ ..=.|. + . .+-..+.+.|+.||+-
T Consensus 138 ~~~~~a~~~gv~gTPtfiI---NGk----y~v~~~-~-~-------~s~e~~~~~i~~Ll~k 183 (184)
T 4dvc_A 138 RFDKQFQDSGLTGVPAVVV---NNR----YLVQGQ-S-A-------KSLDEYFDLVNYLLTL 183 (184)
T ss_dssp HHHHHHHHHTCCSSSEEEE---TTT----EEECGG-G-C-------SSHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCcCCEEEE---CCE----EeeCCc-C-C-------CCHHHHHHHHHHHHhC
Confidence 4457889999999998777 663 211121 1 1 1244688889988863
No 209
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=90.84 E-value=0.15 Score=34.96 Aligned_cols=51 Identities=12% Similarity=0.126 Sum_probs=34.9
Q ss_pred eChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCC
Q 034345 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQP 80 (97)
Q Consensus 16 D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~ 80 (97)
+.+.+.|+.+|...||+++|+. +|+ ....+.|.. +...+.++|+.+++.-+
T Consensus 163 ~~~~~~a~~~gv~g~Pt~~i~~-~G~--~~~~~~G~~-----------~~~~l~~~l~~~~~~~~ 213 (216)
T 2in3_A 163 LAGFQRVAQWGISGFPALVVES-GTD--RYLITTGYR-----------PIEALRQLLDTWLQQHG 213 (216)
T ss_dssp HHHHHHHHHTTCCSSSEEEEEE-TTE--EEEEESSCC-----------CHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHcCCcccceEEEEE-CCE--EEEeccCCC-----------CHHHHHHHHHHHHHhcc
Confidence 3456778999999999988764 552 122566652 13478899998887533
No 210
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=90.66 E-value=0.15 Score=35.15 Aligned_cols=46 Identities=17% Similarity=0.227 Sum_probs=32.6
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
.|..+++++.||...+|++++ +|+ ..+|.|..+. ..|.+.|+.++.
T Consensus 175 ~~~~~~l~~~~~v~~~Pt~~~---~G~---~~~~~G~~~~-----------~~l~~~l~~~~~ 220 (229)
T 2ywm_A 175 ASENQDLAEQFQVVGVPKIVI---NKG---VAEFVGAQPE-----------NAFLGYIMAVYE 220 (229)
T ss_dssp GGGCHHHHHHTTCCSSSEEEE---GGG---TEEEESCCCH-----------HHHHHHHHHHHH
T ss_pred CCCCHHHHHHcCCcccCEEEE---CCE---EEEeeCCCCH-----------HHHHHHHHHHhh
Confidence 346678999999999999988 563 4568886432 256666665553
No 211
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=90.35 E-value=0.41 Score=38.45 Aligned_cols=52 Identities=17% Similarity=0.248 Sum_probs=38.9
Q ss_pred eChhhHHHHhCCccCceEEEEec---CCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCC
Q 034345 16 FQSQDVARDFGAACTPEFFLFKK---DGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQP 80 (97)
Q Consensus 16 D~~q~va~a~gA~~TPe~fvld~---~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~ 80 (97)
|+.+++++.||...+|+++++++ +|.+ ...+.|.. +...|++.|+.++....
T Consensus 76 d~~~~l~~~~~V~~~PTl~~f~~g~~~G~~--~~~~~g~~-----------~~~~L~~~l~~~l~~~~ 130 (519)
T 3t58_A 76 ETNSAVCREFNIAGFPTVRFFQAFTKNGSG--ATLPGAGA-----------NVQTLRMRLIDALESHR 130 (519)
T ss_dssp GGGHHHHHHTTCCSBSEEEEECTTCCSCCC--EEECCSSC-----------CHHHHHHHHHHHHTTCC
T ss_pred cccHHHHHHcCCcccCEEEEEcCcccCCCc--eeEecCCC-----------CHHHHHHHHHHHHhhcc
Confidence 44789999999999999999997 5542 45555542 34478888888887644
No 212
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=90.03 E-value=0.31 Score=34.24 Aligned_cols=61 Identities=10% Similarity=0.174 Sum_probs=40.9
Q ss_pred EEEeChhhHHHHhCCccCceEEEEecCCCCCeeE-EEeeecCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034345 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQL-VYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (97)
Q Consensus 13 vL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l-~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG 78 (97)
|=.|+.+++|..||....|++.+|- +|+ .+ .=.|.-|++. -.+...+...|.+.|+.++.|
T Consensus 79 VDVDe~~e~a~~y~V~siPT~~fFk-~G~---~v~vd~Gtgd~~k-~vGa~~~k~~l~~~ie~~~r~ 140 (160)
T 2av4_A 79 VDITEVPDFNTMYELYDPVSVMFFY-RNK---HMMIDLGTGNNNK-INWPMNNKQEFIDIVETIFRG 140 (160)
T ss_dssp EETTTCCTTTTTTTCCSSEEEEEEE-TTE---EEEEECSSSCCSC-BCSCCCCHHHHHHHHHHHHHH
T ss_pred EECCCCHHHHHHcCCCCCCEEEEEE-CCE---EEEEecCCCCcCe-EEeecCCHHHHHHHHHHHHHH
Confidence 4458999999999999999998885 442 33 2556666663 223222355777777776644
No 213
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=90.00 E-value=0.16 Score=34.11 Aligned_cols=45 Identities=18% Similarity=0.250 Sum_probs=30.5
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG 78 (97)
++.+.+.++++|...||+ |++ +|+ ..-.|. +...+..+|+.+++.
T Consensus 141 v~~~~~~a~~~gv~gtPt-~vi--ng~----~~~~g~------------~~~~l~~~i~~~~~~ 185 (193)
T 2rem_A 141 FQAARAYALKVRPVGTPT-IVV--NGR----YMVTGH------------DFEDTLRITDYLVSR 185 (193)
T ss_dssp HHHHHHHHHHHCCSSSSE-EEE--TTT----EEECCS------------SHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCe-EEE--CCE----EEecCC------------CHHHHHHHHHHHHHH
Confidence 355678899999999999 555 452 222443 234788888888754
No 214
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=89.86 E-value=0.36 Score=32.67 Aligned_cols=42 Identities=10% Similarity=0.257 Sum_probs=29.6
Q ss_pred eEEEe-ChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCC
Q 034345 12 LITLF-QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDS 55 (97)
Q Consensus 12 pvL~D-~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~ 55 (97)
.|-+| +..+++..|+...+|+++++|++|+ ..-+..|...+.
T Consensus 82 ~V~vD~e~~~~~~~~~v~~~PT~~f~~~~G~--~v~~~~G~~~~~ 124 (151)
T 3ph9_A 82 MLNLMHETTDKNLSPDGQYVPRIMFVDPSLT--VRADIAGRYSNR 124 (151)
T ss_dssp EEEESSCCSCGGGCTTCCCSSEEEEECTTSC--BCTTCCCSCTTS
T ss_pred EEEecCCchhhHhhcCCCCCCEEEEECCCCC--EEEEEeCCcCCc
Confidence 34454 3457889999999999999999995 233445664433
No 215
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=89.69 E-value=0.1 Score=34.50 Aligned_cols=46 Identities=11% Similarity=0.015 Sum_probs=32.7
Q ss_pred hhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034345 19 QDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (97)
Q Consensus 19 q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG 78 (97)
+.+|..|+...||++++|+ +|+ -.-+..|.+. ...+...|+.++.+
T Consensus 66 ~~la~~~~V~g~PT~i~f~-~G~--ev~Ri~G~~~-----------~~~f~~~L~~~l~~ 111 (116)
T 3dml_A 66 PGLELARPVTFTPTFVLMA-GDV--ESGRLEGYPG-----------EDFFWPMLARLIGQ 111 (116)
T ss_dssp TTCBCSSCCCSSSEEEEEE-TTE--EEEEEECCCC-----------HHHHHHHHHHHHHH
T ss_pred hhHHHHCCCCCCCEEEEEE-CCE--EEeeecCCCC-----------HHHHHHHHHHHHhh
Confidence 4688999999999999999 885 2445555432 23566777777654
No 216
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=89.41 E-value=0.87 Score=30.95 Aligned_cols=34 Identities=18% Similarity=0.411 Sum_probs=26.1
Q ss_pred hhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecC
Q 034345 18 SQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFD 53 (97)
Q Consensus 18 ~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~ID 53 (97)
..++++.||...+|+++++.. |.. ...+|.|..+
T Consensus 67 ~~~~~~~~~v~~~Pt~~~~~~-g~~-~~~~~~G~~~ 100 (226)
T 1a8l_A 67 GKELAKRYRIDRAPATTITQD-GKD-FGVRYFGLPA 100 (226)
T ss_dssp HHHHHHHTTCCSSSEEEEEET-TBC-CSEEEESCCC
T ss_pred cHHHHHHcCCCcCceEEEEcC-Cce-eeEEEeccCc
Confidence 678999999999999999943 321 1379999754
No 217
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=89.16 E-value=0.2 Score=33.73 Aligned_cols=44 Identities=14% Similarity=0.255 Sum_probs=27.7
Q ss_pred ChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034345 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (97)
Q Consensus 17 ~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~ 79 (97)
.+.+.++++|...||.+|| +| +. +.|.. +-..|.++|+.+++++
T Consensus 137 ~~~~~a~~~gv~GtPt~vv---nG----~~-~~G~~-----------~~~~l~~~i~~~~~~~ 180 (186)
T 3bci_A 137 KDKKIAKDNHIKTTPTAFI---NG----EK-VEDPY-----------DYESYEKLLKDKIKLE 180 (186)
T ss_dssp HHHHHHHHTTCCSSSEEEE---TT----EE-CSCTT-----------CHHHHHHHHHC-----
T ss_pred HHHHHHHHcCCCCCCeEEE---CC----EE-cCCCC-----------CHHHHHHHHHHHHHhh
Confidence 3456789999999999988 66 32 34531 2347888998887764
No 218
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=88.93 E-value=0.46 Score=32.99 Aligned_cols=35 Identities=11% Similarity=0.232 Sum_probs=28.2
Q ss_pred EEEeChhhHHHHh--------CCccCceEEEEecCCCCCeeEEEeee
Q 034345 13 ITLFQSQDVARDF--------GAACTPEFFLFKKDGRRPFQLVYHGQ 51 (97)
Q Consensus 13 vL~D~~q~va~a~--------gA~~TPe~fvld~~g~~~~~l~Y~G~ 51 (97)
|=.|+..++++.| |...+|.+++|+++| ++.|.|.
T Consensus 80 VD~de~~~l~~~y~~~~q~~~gv~g~Pt~v~l~~dG----~~v~~~t 122 (173)
T 3ira_A 80 VDREERPDIDNIYMTVCQIILGRGGWPLNIIMTPGK----KPFFAGT 122 (173)
T ss_dssp EETTTCHHHHHHHHHHHHHHHSCCCSSEEEEECTTS----CEEEEES
T ss_pred eCCcccCcHHHHHHHHHHHHcCCCCCcceeeECCCC----Cceeeee
Confidence 3334556888888 999999999999999 6888764
No 219
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=88.62 E-value=0.44 Score=33.33 Aligned_cols=52 Identities=17% Similarity=0.151 Sum_probs=36.6
Q ss_pred eChhhHHHHhCCccCceEEEEecCCC---CCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCC
Q 034345 16 FQSQDVARDFGAACTPEFFLFKKDGR---RPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQP 80 (97)
Q Consensus 16 D~~q~va~a~gA~~TPe~fvld~~g~---~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~ 80 (97)
|+.+++++.||...+|+++++++.+. + ..+.|.|+ +...|++.|..++....
T Consensus 76 ~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~g-~~~~~~g~------------~~~~l~~~i~~~l~~~~ 130 (244)
T 3q6o_A 76 ETNSAVCRDFNIPGFPTVRFFXAFTXNGSG-AVFPVAGA------------DVQTLRERLIDALESHH 130 (244)
T ss_dssp TTTHHHHHHTTCCSSSEEEEECTTCCSSSC-EECCCTTC------------CHHHHHHHHHHHHHTCT
T ss_pred hhhHHHHHHcCCCccCEEEEEeCCCcCCCC-eeEecCCC------------CHHHHHHHHHHHHHhcc
Confidence 56789999999999999999997432 1 12233331 34578888888887654
No 220
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=88.38 E-value=0.13 Score=36.07 Aligned_cols=46 Identities=13% Similarity=0.258 Sum_probs=31.4
Q ss_pred EEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 13 vL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
..+|...+++++||...||++|+. +|. ++.|..+ ...|+++|+.++
T Consensus 165 ~~v~~~~~l~~~~gV~gtPt~v~~--dG~-----~~~G~~~-----------~~~l~~~l~~~~ 210 (216)
T 1eej_A 165 VDIADHYALGVQLGVSGTPAVVLS--NGT-----LVPGYQP-----------PKEMKEFLDEHQ 210 (216)
T ss_dssp CCHHHHHHHHHHHTCCSSSEEECT--TSC-----EEESCCC-----------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCccCEEEEc--CCe-----EecCCCC-----------HHHHHHHHHHhh
Confidence 456778899999999999998664 352 3467543 225666666543
No 221
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=88.26 E-value=0.49 Score=29.67 Aligned_cols=28 Identities=18% Similarity=0.462 Sum_probs=22.4
Q ss_pred ChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeec
Q 034345 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQF 52 (97)
Q Consensus 17 ~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~I 52 (97)
+..++++.||...+|++++ +| + .|.|..
T Consensus 54 ~~~~l~~~~~V~~~PT~~i---~G----~-~~~G~~ 81 (106)
T 3kp8_A 54 PQAQECTEAGITSYPTWII---NG----R-TYTGVR 81 (106)
T ss_dssp CCCHHHHHTTCCSSSEEEE---TT----E-EEESCC
T ss_pred hhHHHHHHcCCeEeCEEEE---CC----E-EecCCC
Confidence 5678999999999999666 67 4 388864
No 222
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=87.07 E-value=0.71 Score=37.06 Aligned_cols=35 Identities=20% Similarity=0.331 Sum_probs=31.5
Q ss_pred hhcceeEEEeChhhHHHHhCCccCceEEEEecCCC
Q 034345 7 LFLMWLITLFQSQDVARDFGAACTPEFFLFKKDGR 41 (97)
Q Consensus 7 ~~~~fpvL~D~~q~va~a~gA~~TPe~fvld~~g~ 41 (97)
..+.+++..|+++++++.||.+..|..++|+++|+
T Consensus 183 ~~v~v~~v~~~~~~l~~kfgV~~~Pslvl~~~nGk 217 (519)
T 3t58_A 183 HAVAVRRVLNTESDLVNKFGVTDFPSCYLLLRNGS 217 (519)
T ss_dssp TTEEEEEEETTCHHHHHHHTCCCSSEEEEEETTSC
T ss_pred CCeeEEEecCchHHHHHHcCCCCCCeEEEEeCCCc
Confidence 34668888999999999999999999999999995
No 223
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=86.78 E-value=0.14 Score=35.87 Aligned_cols=42 Identities=21% Similarity=0.358 Sum_probs=29.3
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHH
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~a 74 (97)
+|.+.++++.||.+.||.+|+ .+| + ++.|..+ ...|+.+|++
T Consensus 167 v~~~~~l~~~~gV~gTPt~vi--~nG----~-~~~G~~~-----------~~~l~~~l~~ 208 (211)
T 1t3b_A 167 VKKHYELGIQFGVRGTPSIVT--STG----E-LIGGYLK-----------PADLLRALEE 208 (211)
T ss_dssp HHHHHHHHHHHTCCSSCEEEC--TTS----C-CCCSCCC-----------HHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcCCEEEE--eCC----E-EecCCCC-----------HHHHHHHHHh
Confidence 456778999999999999988 466 3 3445432 3367777764
No 224
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=86.73 E-value=0.5 Score=34.97 Aligned_cols=35 Identities=17% Similarity=0.447 Sum_probs=28.7
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecC
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFD 53 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~ID 53 (97)
.|...++++.||....|+.+++ ++|+ ...|.|..+
T Consensus 75 ~~~~~~l~~~~~v~~~Pt~~~~-~~g~---~~~~~G~~~ 109 (350)
T 1sji_A 75 AKKEAKLAKKLGFDEEGSLYVL-KGDR---TIEFDGEFA 109 (350)
T ss_dssp TTTTHHHHHHHTCCSTTEEEEE-ETTE---EEEECSCCC
T ss_pred CCCCHHHHHhcCCCccceEEEE-ECCc---EEEecCCCC
Confidence 4567889999999999999999 5663 678999744
No 225
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=85.41 E-value=0.91 Score=31.13 Aligned_cols=49 Identities=10% Similarity=0.126 Sum_probs=30.9
Q ss_pred ChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034345 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (97)
Q Consensus 17 ~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~ 79 (97)
.+.+.|+++|+..||.++|-+ +|+ ......|.- +...+.++|+.++++.
T Consensus 157 ~~~~~a~~~gv~g~Pt~~v~~-~~~--~~~~~~g~~-----------~~e~~~~~i~~~~~~~ 205 (208)
T 3kzq_A 157 DQLSLAKSLGVNSYPSLVLQI-NDA--YFPIEVDYL-----------STEPTLKLIRERIIEN 205 (208)
T ss_dssp HHHHHHHHTTCCSSSEEEEEE-TTE--EEEECCCSS-----------CSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCcccEEEEEE-CCE--EEEeeCCCC-----------CHHHHHHHHHHHHhcc
Confidence 445778899999999988755 341 122223321 1236788888888654
No 226
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=85.35 E-value=0.3 Score=32.56 Aligned_cols=46 Identities=9% Similarity=0.040 Sum_probs=29.8
Q ss_pred eChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 16 D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
+.+.+.++++|...||+++| +|+ ..+...|.. +...+..+|+.+++
T Consensus 149 ~~~~~~a~~~gv~gtPt~~i---ng~--~~~~~~g~~-----------~~~~l~~~i~~~l~ 194 (195)
T 3c7m_A 149 EKWKASYDVAKIQGVPAYVV---NGK--YLIYTKSIK-----------SIDAMADLIRELAS 194 (195)
T ss_dssp HHGGGHHHHHHHHCSSEEEE---TTT--EEECGGGCC-----------CHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCccCEEEE---CCE--EEeccCCCC-----------CHHHHHHHHHHHHh
Confidence 44567889999999999655 452 122211321 23478999998875
No 227
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=84.91 E-value=0.77 Score=32.25 Aligned_cols=42 Identities=29% Similarity=0.472 Sum_probs=30.3
Q ss_pred hhhHH-HHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034345 18 SQDVA-RDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (97)
Q Consensus 18 ~q~va-~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG 78 (97)
+.+.+ +++|.+.||.+|| +| + .+.|+.+ -..|+.+|+.+++.
T Consensus 156 ~~~~a~~~~GV~GtPtfvv---ng----~-~~~G~~~-----------~e~l~~~i~~~~~~ 198 (205)
T 3gmf_A 156 ETDEAINQYNVSGTPSFMI---DG----I-LLAGTHD-----------WASLRPQILARLNE 198 (205)
T ss_dssp HHHHHHHHHCCCSSSEEEE---TT----E-ECTTCCS-----------HHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCccCCEEEE---CC----E-EEeCCCC-----------HHHHHHHHHHHhhc
Confidence 34566 8999999999998 56 4 3556432 34799999888764
No 228
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=84.44 E-value=2.2 Score=30.28 Aligned_cols=56 Identities=18% Similarity=0.280 Sum_probs=37.3
Q ss_pred cceeEE-EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHH--cCCCC
Q 034345 9 LMWLIT-LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL--SGQPV 81 (97)
Q Consensus 9 ~~fpvL-~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alL--aG~~v 81 (97)
+.|-.+ .|+.+++++.||....|.+.++ +| ..+|+|.-+. +.+..-+++++ .|.++
T Consensus 65 v~~~~vd~d~~~~~~~~~gv~~~Pt~~i~--~g----~~~~~G~~~~-----------~~l~~fv~~~l~~~~~~~ 123 (243)
T 2hls_A 65 LKLNVYYRESDSDKFSEFKVERVPTVAFL--GG----EVRWTGIPAG-----------EEIRALVEVIMRLSEDES 123 (243)
T ss_dssp EEEEEEETTTTHHHHHHTTCCSSSEEEET--TT----TEEEESCCCT-----------THHHHHHHHHHHHHTTCC
T ss_pred eEEEEecCCcCHHHHHhcCCCcCCEEEEE--CC----ceeEcCCCcH-----------HHHHHHHHHHHhccCCCC
Confidence 444332 3567889999999999999998 34 3889997422 24666666655 34443
No 229
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=84.23 E-value=0.9 Score=31.06 Aligned_cols=42 Identities=12% Similarity=0.125 Sum_probs=28.7
Q ss_pred ChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 17 ~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
.+.+.++++|...||.+|| +| +.. .|.. . ...+.++|+.+++
T Consensus 142 ~~~~~a~~~gv~gtPt~vv---ng----~~~-~~~~--~---------~e~l~~~i~~ll~ 183 (193)
T 3hz8_A 142 KMQELTETFQIDGVPTVIV---GG----KYK-VEFA--D---------WESGMNTIDLLAD 183 (193)
T ss_dssp HHHHHHHHTTCCSSSEEEE---TT----TEE-ECCS--S---------HHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcCCEEEE---CC----EEE-ecCC--C---------HHHHHHHHHHHHH
Confidence 3567789999999999987 56 233 3322 1 3367788888775
No 230
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=83.62 E-value=0.5 Score=28.85 Aligned_cols=43 Identities=21% Similarity=0.165 Sum_probs=29.9
Q ss_pred hHHHHhCCccCceEEEEecCCCCCe-eEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 20 DVARDFGAACTPEFFLFKKDGRRPF-QLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 20 ~va~a~gA~~TPe~fvld~~g~~~~-~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
.+++ +...+|++++++++|+ . ..+|.|.. +...|.+.|+.++.
T Consensus 74 ~~~~--~v~~~Pt~~~~~~~~~--~~~~~~~G~~-----------~~~~l~~~i~~~~~ 117 (121)
T 2djj_A 74 DVPD--EIQGFPTIKLYPAGAK--GQPVTYSGSR-----------TVEDLIKFIAENGK 117 (121)
T ss_dssp CCSS--CCSSSSEEEEECSSCT--TSCCCCCCCS-----------CHHHHHHHHHHTSS
T ss_pred cccc--ccCcCCeEEEEeCcCC--CCceEecCCC-----------CHHHHHHHHHhccC
Confidence 4555 9999999999998873 1 34566643 24478888877654
No 231
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=83.28 E-value=0.59 Score=28.88 Aligned_cols=41 Identities=10% Similarity=0.201 Sum_probs=26.7
Q ss_pred ChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 17 ~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
+..++++.|| ..+|.+| + +|+ .+ ..|.+|. ..|+++|+.++
T Consensus 55 ~~~el~~~~g-~~vP~l~-~--~g~---~~-~~~g~~~-----------~~l~~~l~~~~ 95 (100)
T 1wjk_A 55 ENSTWYERYK-FDIPVFH-L--NGQ---FL-MMHRVNT-----------SKLEKQLRKLS 95 (100)
T ss_dssp TTHHHHHHSS-SSCSEEE-E--SSS---EE-EESSCCH-----------HHHHHHHHSSS
T ss_pred chHHHHHHHC-CCCCEEE-E--CCE---EE-EecCCCH-----------HHHHHHHHHHH
Confidence 5688999999 9999765 3 553 33 4455432 36777776544
No 232
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=81.27 E-value=0.45 Score=31.46 Aligned_cols=20 Identities=10% Similarity=0.021 Sum_probs=16.1
Q ss_pred eChhhHHHHhCCccCceEEE
Q 034345 16 FQSQDVARDFGAACTPEFFL 35 (97)
Q Consensus 16 D~~q~va~a~gA~~TPe~fv 35 (97)
+...+.++++|...||.+||
T Consensus 136 ~~~~~~a~~~gv~gtPt~vv 155 (175)
T 1z6m_A 136 SAVIAEANAAHIQFVPTIII 155 (175)
T ss_dssp HHHHHHHHHHTCCSSCEEEE
T ss_pred HHHHHHHHHcCCCCcCeEEE
Confidence 34567899999999999555
No 233
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=80.93 E-value=2.2 Score=30.42 Aligned_cols=46 Identities=20% Similarity=0.203 Sum_probs=33.5
Q ss_pred hhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034345 18 SQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (97)
Q Consensus 18 ~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v 81 (97)
+.+.|+++|+..||.++| +| +....|+-+ ...+.++|+.+++....
T Consensus 172 ~~~~a~~~Gv~GvPtfvv---~g----~~~v~Ga~~-----------~e~~~~~i~~~~~~~~~ 217 (239)
T 3gl5_A 172 DEREAAQLGATGVPFFVL---DR----AYGVSGAQP-----------AEVFTQALTQAWGERTP 217 (239)
T ss_dssp HHHHHHHTTCCSSSEEEE---TT----TEEEESSCC-----------HHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHCCCCeeCeEEE---CC----cEeecCCCC-----------HHHHHHHHHHHHhhcCc
Confidence 345678999999999887 45 445577522 34789999999987643
No 234
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=80.78 E-value=0.78 Score=31.29 Aligned_cols=34 Identities=12% Similarity=0.002 Sum_probs=26.4
Q ss_pred EeChhhHHHHhC---CccCceEEEEecCCCCCeeEEEeee
Q 034345 15 LFQSQDVARDFG---AACTPEFFLFKKDGRRPFQLVYHGQ 51 (97)
Q Consensus 15 ~D~~q~va~a~g---A~~TPe~fvld~~g~~~~~l~Y~G~ 51 (97)
.|+..++++.|+ ....|+++++|++|+ .+...|.
T Consensus 93 ~d~~~~~~~~~~~~~v~~iPt~i~~~~~G~---~~~~~g~ 129 (167)
T 1z6n_A 93 KGRAEDDLRQRLALERIAIPLVLVLDEEFN---LLGRFVE 129 (167)
T ss_dssp HHHHHHHTTTTTTCSSCCSSEEEEECTTCC---EEEEEES
T ss_pred CCCCHHHHHHHHHcCCCCcCeEEEECCCCC---EEEEEcC
Confidence 467778889997 899999999999985 3443454
No 235
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=80.49 E-value=1 Score=30.29 Aligned_cols=46 Identities=11% Similarity=0.177 Sum_probs=30.3
Q ss_pred eChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcH-HHHHHHHHHHHc
Q 034345 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTG-RDIRLAIECVLS 77 (97)
Q Consensus 16 D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~-~~L~~Ai~alLa 77 (97)
..+.+.++++|...||.++| +| +...-|.-..+ . ..+.+.|+.|++
T Consensus 138 ~~~~~~a~~~gv~gtPt~vi---ng----~~~~~g~~~~~---------~~e~~~~~i~~L~~ 184 (195)
T 3hd5_A 138 QRASQLAEAAHIDGTPAFAV---GG----RYMTSPVLAGN---------DYAGALKVVDQLIV 184 (195)
T ss_dssp HHHHHHHHHTTCCSSSEEEE---TT----TEEECTTTTTG---------GGTTHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcCceEEE---CC----EEEeCccccCC---------hHHHHHHHHHHHHH
Confidence 34567889999999999998 56 34444442211 2 247777777765
No 236
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=80.30 E-value=1.6 Score=32.73 Aligned_cols=33 Identities=24% Similarity=0.558 Sum_probs=27.4
Q ss_pred eChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeec
Q 034345 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQF 52 (97)
Q Consensus 16 D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~I 52 (97)
|...++++.||....|+++++. +|. .+.|.|..
T Consensus 78 ~~~~~l~~~~~V~~~PTl~~f~-~G~---~~~y~G~~ 110 (367)
T 3us3_A 78 EKDAAVAKKLGLTEEDSIYVFK-EDE---VIEYDGEF 110 (367)
T ss_dssp TTTHHHHHHHTCCSTTEEEEEE-TTE---EEECCSCC
T ss_pred cccHHHHHHcCCCcCceEEEEE-CCc---EEEeCCCC
Confidence 5678999999999999999997 463 57888864
No 237
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=79.50 E-value=2.7 Score=30.78 Aligned_cols=54 Identities=19% Similarity=0.215 Sum_probs=38.5
Q ss_pred hhhHHHHhCCcc--CceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCCC
Q 034345 18 SQDVARDFGAAC--TPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVS 82 (97)
Q Consensus 18 ~q~va~a~gA~~--TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v~ 82 (97)
.+.+++.||... .|++.+++..+. ...|.- +.. ..+...|++-++..++|+-.+
T Consensus 180 ~~~~~~~fgi~~~~~P~~~~~~~~~~---~~ky~~--~~~------~~~~~~l~~fi~~~l~g~~~~ 235 (361)
T 3uem_A 180 NQRILEFFGLKKEECPAVRLITLEEE---MTKYKP--ESE------ELTAERITEFCHRFLEGKIKP 235 (361)
T ss_dssp GHHHHHHTTCCTTTCSEEEEEECC-----CCEECC--SSC------CCCHHHHHHHHHHHHTTCSCC
T ss_pred HHHHHHHcCCCccCCccEEEEEcCCc---ccccCC--Ccc------ccCHHHHHHHHHHHhcCCCcc
Confidence 578999999987 999999998553 456762 111 234668999999999987433
No 238
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=78.96 E-value=1.5 Score=27.27 Aligned_cols=25 Identities=8% Similarity=0.267 Sum_probs=22.3
Q ss_pred eChhhHHHHhCCccCceEEEEecCC
Q 034345 16 FQSQDVARDFGAACTPEFFLFKKDG 40 (97)
Q Consensus 16 D~~q~va~a~gA~~TPe~fvld~~g 40 (97)
|+...+++.||...+|+++++++.+
T Consensus 79 d~~~~~~~~~~i~~~Pt~~~~~~~~ 103 (123)
T 1wou_A 79 DPNNDFRKNLKVTAVPTLLKYGTPQ 103 (123)
T ss_dssp CTTCHHHHHHCCCSSSEEEETTSSC
T ss_pred chhHHHHHHCCCCeeCEEEEEcCCc
Confidence 6788999999999999999998833
No 239
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=78.84 E-value=0.97 Score=36.30 Aligned_cols=62 Identities=11% Similarity=0.137 Sum_probs=40.9
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCC-CCCCCCcHHHHHHHHHHHHc
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRP-SNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~-~~~~~~t~~~L~~Ai~alLa 77 (97)
.|...++++.||....|+++++++.+.. ....|.|..+-..- --....+...|+..+++|++
T Consensus 90 ~d~~~~la~~y~V~~~PTlilf~~gg~~-~~~~y~G~r~~e~L~fI~k~l~~~eLe~~~e~Lin 152 (470)
T 3qcp_A 90 CASEVDLCRKYDINFVPRLFFFYPRDSC-RSNEECGTSSLEHVAFENSHLEVDELESEVRRLVN 152 (470)
T ss_dssp TTTCHHHHHHTTCCSSCEEEEEEESSCC-CTTSCCCCCCEEEEECSCTTCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHcCCCccCeEEEEECCCce-EEEEeeCCCCHHHHHHHHHhcCHHHHHHHHHHHhh
Confidence 4677889999999999999999876631 14567775332210 01123456678887877764
No 240
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=78.29 E-value=1.8 Score=33.01 Aligned_cols=55 Identities=15% Similarity=0.187 Sum_probs=38.8
Q ss_pred EeCh-hhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034345 15 LFQS-QDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (97)
Q Consensus 15 ~D~~-q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v 81 (97)
+|.+ .++++.|+...+|+++++++++.. -..+|.|.. +...|.+.|+..+.....
T Consensus 410 id~~~~~~~~~~~v~~~Pt~~~~~~~~~~-~~~~~~G~~-----------~~~~l~~~l~~~~~~~~~ 465 (481)
T 3f8u_A 410 MDATANDVPSPYEVRGFPTIYFSPANKKL-NPKKYEGGR-----------ELSDFISYLQREATNPPV 465 (481)
T ss_dssp EETTSSCCCTTCCCCSSSEEEEECTTCTT-SCEECCSCC-----------SHHHHHHHHHHHCSSCCC
T ss_pred EECCchhhHhhCCCcccCEEEEEeCCCeE-eeeEeCCCC-----------CHHHHHHHHHHhcCCccc
Confidence 3433 368899999999999999988841 047888853 244688888777655433
No 241
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=77.48 E-value=1.9 Score=31.64 Aligned_cols=24 Identities=8% Similarity=0.373 Sum_probs=21.3
Q ss_pred ChhhHHHHhCCccCceEEEEecCC
Q 034345 17 QSQDVARDFGAACTPEFFLFKKDG 40 (97)
Q Consensus 17 ~~q~va~a~gA~~TPe~fvld~~g 40 (97)
...++++.||...+|++++++..+
T Consensus 79 ~~~~l~~~~~I~~~Pt~~~~~~g~ 102 (298)
T 3ed3_A 79 KNKALCAKYDVNGFPTLMVFRPPK 102 (298)
T ss_dssp TTHHHHHHTTCCBSSEEEEEECCC
T ss_pred cCHHHHHhCCCCccceEEEEECCc
Confidence 467999999999999999998754
No 242
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=77.37 E-value=1.9 Score=27.72 Aligned_cols=35 Identities=14% Similarity=0.309 Sum_probs=24.7
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCC
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDS 55 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~ 55 (97)
+|++.+++..||.. +|.++++. +| +....|++|-.
T Consensus 66 Id~d~~l~~~ygv~-VP~l~~~~-dG----~~v~~g~~~~~ 100 (107)
T 2fgx_A 66 IDGNEHLTRLYNDR-VPVLFAVN-ED----KELCHYFLDSD 100 (107)
T ss_dssp TTTCHHHHHHSTTS-CSEEEETT-TT----EEEECSSCCCH
T ss_pred CCCCHHHHHHhCCC-CceEEEEE-CC----EEEEecCCCHH
Confidence 45678999999986 99986663 56 45566776443
No 243
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=77.37 E-value=2 Score=33.20 Aligned_cols=34 Identities=21% Similarity=0.385 Sum_probs=27.1
Q ss_pred eChhhHHHHhCCccCceEEEEecCCCCCe--eEEEeeec
Q 034345 16 FQSQDVARDFGAACTPEFFLFKKDGRRPF--QLVYHGQF 52 (97)
Q Consensus 16 D~~q~va~a~gA~~TPe~fvld~~g~~~~--~l~Y~G~I 52 (97)
|...++++.||...+|+++++.... . ...|.|..
T Consensus 73 ~~~~~l~~~~~v~~~Pt~~~~~~g~---~~~~~~~~G~~ 108 (504)
T 2b5e_A 73 TENQDLCMEHNIPGFPSLKIFKNSD---VNNSIDYEGPR 108 (504)
T ss_dssp TTCHHHHHHTTCCSSSEEEEEETTC---TTCEEECCSCC
T ss_pred CCCHHHHHhcCCCcCCEEEEEeCCc---cccceeecCCC
Confidence 4667899999999999999997543 3 56788853
No 244
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=76.27 E-value=2 Score=32.20 Aligned_cols=47 Identities=26% Similarity=0.334 Sum_probs=33.3
Q ss_pred eChhhHHHHhCCccCceEEEEecCCCCCeeE--EEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQL--VYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 16 D~~q~va~a~gA~~TPe~fvld~~g~~~~~l--~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
|...++++.||...+|+++++. +|+ .+ .|.|..+ ...|.+.|...+.
T Consensus 69 ~~~~~l~~~~~v~~~Pt~~~f~-~G~---~~~~~~~G~~~-----------~~~l~~~i~~~~~ 117 (382)
T 2r2j_A 69 DQHSDIAQRYRISKYPTLKLFR-NGM---MMKREYRGQRS-----------VKALADYIRQQKS 117 (382)
T ss_dssp TTCHHHHHHTTCCEESEEEEEE-TTE---EEEEECCSCCS-----------HHHHHHHHHHHHS
T ss_pred CccHHHHHhcCCCcCCEEEEEe-CCc---EeeeeecCcch-----------HHHHHHHHHHhcc
Confidence 4667899999999999999885 552 33 4788532 3357777766663
No 245
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=73.81 E-value=3.2 Score=33.86 Aligned_cols=47 Identities=15% Similarity=0.222 Sum_probs=35.6
Q ss_pred eChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 16 D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
|+...+++.||....|++++++. |. ...|.|.++ ...|.+-|+.++.
T Consensus 496 ~~~~~~~~~~~v~~~Pt~~~~~~-g~---~~~~~g~~~-----------~~~l~~fi~~~~~ 542 (780)
T 3apo_A 496 TIHEGLCNMYNIQAYPTTVVFNQ-SS---IHEYEGHHS-----------AEQILEFIEDLRN 542 (780)
T ss_dssp TTCHHHHHHTTCCSSSEEEEEET-TE---EEEECSCSC-----------HHHHHHHHHHHHS
T ss_pred CCCHHHHHHcCCCcCCeEEEEcC-Cc---eeeecCccc-----------HHHHHHHHHhhcc
Confidence 45678999999999999999954 53 567777543 3467777877776
No 246
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=72.97 E-value=2.4 Score=32.34 Aligned_cols=35 Identities=20% Similarity=0.410 Sum_probs=27.1
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeec
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQF 52 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~I 52 (97)
.|...++++.||...+|+++++. +|+ ....|.|..
T Consensus 61 ~~~~~~l~~~~~v~~~Ptl~~~~-~g~--~~~~~~G~~ 95 (481)
T 3f8u_A 61 CTANTNTCNKYGVSGYPTLKIFR-DGE--EAGAYDGPR 95 (481)
T ss_dssp TTTCHHHHHHTTCCEESEEEEEE-TTE--EEEECCSCS
T ss_pred CCCCHHHHHhcCCCCCCEEEEEe-CCc--eeeeecCcc
Confidence 45677899999999999998884 553 367788854
No 247
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=72.13 E-value=4.1 Score=27.64 Aligned_cols=42 Identities=14% Similarity=0.127 Sum_probs=29.8
Q ss_pred hhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034345 18 SQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (97)
Q Consensus 18 ~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG 78 (97)
+.+.|+++|...||.++| +| + .+.|.-+ -..|+++|+...+.
T Consensus 156 ~~~~a~~~Gv~G~Ptfvi---~g----~-~~~G~~~-----------~~~l~~~l~~~~~~ 197 (203)
T 2imf_A 156 QTHAAIERKVFGVPTMFL---GD----E-MWWGNDR-----------LFMLESAMGRLCRQ 197 (203)
T ss_dssp HHHHHHHTTCCSSSEEEE---TT----E-EEESGGG-----------HHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCcCCEEEE---CC----E-EEECCCC-----------HHHHHHHHhccccc
Confidence 456788999999999887 56 5 5778721 23677888776543
No 248
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=70.15 E-value=1.3 Score=32.86 Aligned_cols=49 Identities=14% Similarity=0.201 Sum_probs=37.7
Q ss_pred ccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034345 28 ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (97)
Q Consensus 28 ~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~v 81 (97)
-+|-+..-+|.+| +.|.||.||.-..++..+.-.+++++|.+++....|
T Consensus 230 ~~TGDlg~~d~~g-----~~~~GR~dd~Ik~~G~~v~p~eIE~~l~~~~~~p~V 278 (358)
T 4gs5_A 230 VQTNDLVEIHGNA-----FQWIGRADNVINSGGVKIVLDQIDQRIAAVFHHLNI 278 (358)
T ss_dssp EEEEEEEEECSSE-----EEEEEEGGGEEEETTEEEEHHHHHHHHHHHHHHHTC
T ss_pred eecCCccccccCc-----eEEcccccCeEEECCEEECHHHHHHHHHHhccCCCc
Confidence 4788889999876 778999999866667777778899888777654333
No 249
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=69.86 E-value=4.1 Score=31.20 Aligned_cols=43 Identities=16% Similarity=0.183 Sum_probs=31.9
Q ss_pred ccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHH
Q 034345 28 ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (97)
Q Consensus 28 ~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~a 74 (97)
-+|-+...+|.+| .+.+.||.||.-...+..+.-.+++++|.+
T Consensus 382 ~~TGDlg~~d~dG----~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~ 424 (521)
T 3l8c_A 382 YHTGDIGSLTEDN----ILLYGGRLDFQIKYAGYRIELEDVSQQLNQ 424 (521)
T ss_dssp EEEEEEEEECSSS----CEEEEEEGGGBCC-----CBHHHHHHHHHT
T ss_pred eeCCCEEEEeCCC----eEEEeCcccceEeECCEEeCHHHHHHHHHc
Confidence 5788999999999 699999999997666777777788877654
No 250
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=69.81 E-value=2.3 Score=33.00 Aligned_cols=43 Identities=12% Similarity=0.185 Sum_probs=18.3
Q ss_pred ccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHH
Q 034345 28 ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (97)
Q Consensus 28 ~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~a 74 (97)
-+|-+..-+|.+| .+.+.||.||.-...+..+.-.+++++|.+
T Consensus 406 ~~TGDlg~~d~dG----~l~~~GR~dd~Ik~~G~~v~p~eIE~~l~~ 448 (562)
T 3ite_A 406 YRTGDIVRMDADS----SILFLGRKDEQVKVRGQRLELGEVSEVIRS 448 (562)
T ss_dssp EEEEEEEEECTTS----CEEEEEEC----------------------
T ss_pred EecCCEEEEcCCC----eEEEEccccCEEeECcEEECHHHHHHHHHh
Confidence 4677888899999 699999999997666666555667766644
No 251
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=69.00 E-value=4.9 Score=31.29 Aligned_cols=51 Identities=6% Similarity=0.048 Sum_probs=39.4
Q ss_pred hHHHHh---CCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHH
Q 034345 20 DVARDF---GAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (97)
Q Consensus 20 ~va~a~---gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~a 74 (97)
..++.| |--+|=+..-+|++| .+.+.||+||.-..++..+.-.+++.+|.+
T Consensus 409 ~t~~~f~~~g~~~TGDl~~~~~dG----~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~ 462 (548)
T 2d1s_A 409 ATKELIDEEGWLHTGDIGYYDEEK----HFFIVDRLKSLIKYKGYQVPPAELESVLLQ 462 (548)
T ss_dssp HHHHHBCTTSCEEEEEEEEECTTC----CEEEEEEGGGCBCBTTCCBCHHHHHHHHHT
T ss_pred HhhhcccCCcEEEccCEEEEcCCC----eEEEeccccceEEECCEEECHHHHHHHHHh
Confidence 445666 345889999999999 699999999997666777777777776643
No 252
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=68.51 E-value=8.5 Score=25.91 Aligned_cols=53 Identities=13% Similarity=0.299 Sum_probs=31.4
Q ss_pred eChhhHHHHhCCccCceEEEEecCCCCCeeEEEeee-cCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034345 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQ-FDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (97)
Q Consensus 16 D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~-IDd~~~~~~~~~t~~~L~~Ai~alLaG~ 79 (97)
..+.+.++++|...||.+|| +| +..-.|. +.... .......+.+.|+.|++-+
T Consensus 132 ~~~~~~a~~~gv~GtPt~~v---ng----~~~v~~~~~~~~~----~~~~~~~~~~~i~~Li~k~ 185 (189)
T 3l9v_A 132 ALQERLFKEYGVRGTPSVYV---RG----RYHINNAAFGAFS----VENFRSRYAAVVRKLLAGN 185 (189)
T ss_dssp HHHHHHHHHTTCCSSSEEEE---TT----TEEECGGGCCCSS----HHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHhCCCccCEEEE---CC----EEEECcccccccc----ccchHHHHHHHHHHHHhCC
Confidence 34567789999999999998 56 3433442 22210 0000146777888888643
No 253
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=68.10 E-value=3.7 Score=31.89 Aligned_cols=42 Identities=7% Similarity=0.139 Sum_probs=23.2
Q ss_pred ccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHH
Q 034345 28 ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIE 73 (97)
Q Consensus 28 ~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~ 73 (97)
-+|=+..-+|.+| .+.|.||.||.-...+..+.-.+++.+|.
T Consensus 418 ~~TGDl~~~~~dG----~l~~~GR~dd~ik~~G~~v~p~eIE~~l~ 459 (549)
T 3g7s_A 418 FRTGDVGFIDEEG----FLHFQDRVKEVIKYKGYTIAPFELEALLM 459 (549)
T ss_dssp EEEEEEEEECTTS----CEEEEEEC------------CHHHHHHHT
T ss_pred EccCcEEEEcCCc----eEEEeccccceEEECCEEECHHHHHHHHH
Confidence 4677888888998 79999999999765565555556666553
No 254
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=67.53 E-value=4.3 Score=30.90 Aligned_cols=42 Identities=12% Similarity=0.032 Sum_probs=33.4
Q ss_pred ccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHH
Q 034345 28 ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIE 73 (97)
Q Consensus 28 ~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~ 73 (97)
-+|-+..-+|.+| .+.+.||.||.-..++..+.-.+++.+|.
T Consensus 377 ~~TGDl~~~~~~G----~l~~~GR~dd~ik~~G~~v~p~eiE~~l~ 418 (501)
T 3ipl_A 377 FNTGDIAEIDHEG----YVMIYDRRKDLIISGGENIYPYQIETVAK 418 (501)
T ss_dssp EEEEEEEEECTTS----CEEEEEECCCCEECSSCEECHHHHHHHHT
T ss_pred eecCCEEEEcCCC----eEEEEccccceEEECCEEECHHHHHHHHH
Confidence 4788888999999 79999999999766666666667776553
No 255
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=66.94 E-value=2.8 Score=32.55 Aligned_cols=50 Identities=16% Similarity=0.191 Sum_probs=24.0
Q ss_pred hHHHHhC---CccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHH
Q 034345 20 DVARDFG---AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIE 73 (97)
Q Consensus 20 ~va~a~g---A~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~ 73 (97)
..++.|. --+|=+..-+|++| .+.|.||.||.-...+..+.-.+++.+|.
T Consensus 407 ~t~~~f~~~g~~~TGDlg~~~~dG----~l~~~GR~dd~ik~~G~~v~p~eIE~~l~ 459 (544)
T 3o83_A 407 HNSQVFDEDNYYYSGDLVQRTPDG----NLRVVGRIKDQINRGGEKIASEEIEKLIL 459 (544)
T ss_dssp HHHHHBCTTCCEEEEEEEEECTTS----CEEEEEEEC--------------------
T ss_pred hhhhhCCCCCCeEcCCEEEEcCCC----CEEEEeecCCEEEeCCEEECHHHHHHHHH
Confidence 4455662 35888999999999 79999999998765555555556666554
No 256
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=66.35 E-value=2.5 Score=34.52 Aligned_cols=55 Identities=15% Similarity=0.062 Sum_probs=37.6
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~ 79 (97)
.|+...+++.||...+|+++++ ++|+ ..-+|.|.--.. .+...|.+.|+.+++..
T Consensus 715 ~~~~~~~~~~~~v~~~Pt~~~~-~~g~--~~~~~~G~~~g~-------~~~~~l~~~l~~~l~~~ 769 (780)
T 3apo_A 715 CQAYPQTCQKAGIKAYPSVKLY-QYER--AKKSIWEEQINS-------RDAKTIAALIYGKLETL 769 (780)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEE-EEET--TTTEEEEEEECC-------CCHHHHHHHHHHHTTC-
T ss_pred CCCCHHHHHhcCCCcCCEEEEE-cCCC--ccccccCcccCC-------cCHHHHHHHHHHHHHHh
Confidence 3556789999999999999999 5664 244677741011 13457888888888643
No 257
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=66.26 E-value=21 Score=22.33 Aligned_cols=53 Identities=13% Similarity=0.372 Sum_probs=34.5
Q ss_pred EeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHH
Q 034345 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECV 75 (97)
Q Consensus 15 ~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~al 75 (97)
+|.+.. .+.|+...+|++++++ +|+ ..-++.|..+-. +...+...|+..|+..
T Consensus 67 vd~~~~-~~~~~i~~~Pt~~~~~-~G~--~v~~~~G~~~~~----~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 67 AIVNSC-IEHYHDNCLPTIFVYK-NGQ--IEGKFIGIIECG----GINLKLEELEWKLSEV 119 (135)
T ss_dssp ECCSSS-CSSCCSSCCSEEEEES-SSS--CSEEEESTTTTT----CTTCCHHHHHHHHHHH
T ss_pred EEhhcC-cccCCCCCCCEEEEEE-CCE--EEEEEEeEEeeC----CCcCCHHHHHHHHHHc
Confidence 454433 3789999999999996 675 466778865322 1123456777777664
No 258
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=65.88 E-value=5.8 Score=30.44 Aligned_cols=50 Identities=16% Similarity=0.172 Sum_probs=33.7
Q ss_pred hHHHHhC--CccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHH
Q 034345 20 DVARDFG--AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIE 73 (97)
Q Consensus 20 ~va~a~g--A~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~ 73 (97)
..++.|. --+|-+..-+|.+| .+.|.||.||.-..++..+.-.+++.+|.
T Consensus 398 ~t~~~f~~~~~~TGDl~~~~~~G----~l~~~GR~dd~ik~~G~~v~p~eIE~~l~ 449 (529)
T 2v7b_A 398 KSRATFLGEWIRSGDKYCRLPNG----CYVYAGRSDDMLKVSGQYVSPVEVEMVLV 449 (529)
T ss_dssp HHHHHEETTEEEEEEEEEECTTS----CEEEEEEGGGCBC----CBCHHHHHHHHT
T ss_pred HHHHhhhcCCcccCceEEECCCc----cEEEeCccCCeEEECCEEECHHHHHHHHH
Confidence 3344552 34788889999999 69999999999766666666666666553
No 259
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=65.74 E-value=4 Score=31.66 Aligned_cols=50 Identities=18% Similarity=0.232 Sum_probs=37.3
Q ss_pred hHHHHhC---CccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHH
Q 034345 20 DVARDFG---AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIE 73 (97)
Q Consensus 20 ~va~a~g---A~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~ 73 (97)
..++.|- --+|=+..-+|.+| .+.|.||.||.-..++..+.-.+++.+|.
T Consensus 398 ~t~~~f~~~g~~~TGDlg~~~~dG----~l~~~GR~dd~ik~~G~~v~p~eIE~~l~ 450 (539)
T 1mdb_A 398 HNAASFTEDGFYRTGDIVRLTRDG----YIVVEGRAKDQINRGGEKVAAEEVENHLL 450 (539)
T ss_dssp HHHHHBCTTSCEEEEEEEEECTTS----CEEEEEEGGGCEECSSCEECHHHHHHHHT
T ss_pred hhhhhccCCCCeecCceEEECCCC----cEEEeccccceEEECCEEECHHHHHHHHH
Confidence 3455662 35888999999999 69999999999766666666667666553
No 260
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=65.35 E-value=7.3 Score=31.36 Aligned_cols=44 Identities=23% Similarity=0.129 Sum_probs=36.5
Q ss_pred CccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHH
Q 034345 27 AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (97)
Q Consensus 27 A~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~a 74 (97)
--+|=+..-+|.+| .+.+.||+||.-...+..+.-.+++.+|.+
T Consensus 504 ~y~TGDlg~~d~dG----~l~i~GR~dd~Ik~~G~rI~~~eIE~~l~~ 547 (663)
T 1ry2_A 504 YYFTGDGAAKDKDG----YIWILGRVDDVVNVSGHRLSTAEIEAAIIE 547 (663)
T ss_dssp SEEEEEEEEECTTC----CEEECSCTTSCBCSSSCCBCHHHHHHHHHS
T ss_pred EEEcCCEEEEcCCC----CEEEEeecCCEEEECCEEcCHHHHHHHHHh
Confidence 45888999999999 699999999997666777777888887753
No 261
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=63.98 E-value=2.8 Score=32.22 Aligned_cols=51 Identities=16% Similarity=0.167 Sum_probs=37.9
Q ss_pred hHHHHhC---CccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHH
Q 034345 20 DVARDFG---AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (97)
Q Consensus 20 ~va~a~g---A~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~a 74 (97)
..++.|. --+|=+..-+|++| .+.|.||.||.-...+..+.-.+++.+|.+
T Consensus 367 ~t~~~f~~~g~~~TGDl~~~~~dG----~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~ 420 (503)
T 4fuq_A 367 KTKSEFRDDGFFITGDLGKIDERG----YVHILGRGKDLVITGGFNVYPKEIESEIDA 420 (503)
T ss_dssp HHHHTBCTTSCEEEEEEEEECTTC----EEEECCSSTTCEEETTEEECHHHHHHHHHT
T ss_pred hhHhhhCCCCCeEcceeEEEcCCC----cEEEEecCCCEEEECCEEECHHHHHHHHHh
Confidence 3455553 35788999999999 799999999986656666666677776643
No 262
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=63.93 E-value=3.3 Score=32.38 Aligned_cols=42 Identities=21% Similarity=0.258 Sum_probs=18.1
Q ss_pred ccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHH
Q 034345 28 ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIE 73 (97)
Q Consensus 28 ~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~ 73 (97)
-+|=+..-+|.+| .+.|.||+||.-..++..+.-.+++.+|.
T Consensus 448 ~~TGDlg~~d~dG----~l~~~GR~~d~Ik~~G~~v~p~eIE~~l~ 489 (570)
T 4gr5_A 448 YRTGDLARRRADG----VLEYVGRADDQVKIRGFRVEPGEVEARLV 489 (570)
T ss_dssp EEEEEEEEECTTS----CEEEEEC----------------------
T ss_pred EeCCCeEEECCCC----eEEEEcccCCEEEECcEEeCHHHHHHHHh
Confidence 5888999999999 79999999998665555555556666554
No 263
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=63.68 E-value=4.9 Score=28.03 Aligned_cols=28 Identities=7% Similarity=0.298 Sum_probs=24.7
Q ss_pred EEEeChhhHHHHhCCccCceEEEEecCC
Q 034345 13 ITLFQSQDVARDFGAACTPEFFLFKKDG 40 (97)
Q Consensus 13 vL~D~~q~va~a~gA~~TPe~fvld~~g 40 (97)
|=.|+.++++..||.+..|+++++.+.+
T Consensus 87 vD~d~~~~la~~~~I~siPtl~~F~~g~ 114 (178)
T 3ga4_A 87 VDVNEVPQLVKDLKLQNVPHLVVYPPAE 114 (178)
T ss_dssp EETTTCHHHHHHTTCCSSCEEEEECCCC
T ss_pred EECccCHHHHHHcCCCCCCEEEEEcCCC
Confidence 3457889999999999999999998776
No 264
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=63.27 E-value=3.6 Score=31.80 Aligned_cols=51 Identities=10% Similarity=0.123 Sum_probs=38.3
Q ss_pred hHHHHhC---CccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHH
Q 034345 20 DVARDFG---AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (97)
Q Consensus 20 ~va~a~g---A~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~a 74 (97)
..++.|. --+|=+..-+|.+| .+.|.||.||.-...+..+.-.+++.+|.+
T Consensus 402 ~t~~~~~~~g~~~TGDl~~~~~dG----~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~ 455 (536)
T 3ni2_A 402 ATSRTIDKEGWLHTGDIGYIDDDD----ELFIVDRLKELIKYKGFQVAPAELEALLIA 455 (536)
T ss_dssp HHHHHBCTTSCEEEEEEEEECTTS----CEEEEEECSCCEEETTEEECHHHHHHHHHT
T ss_pred HHHhhccCCCceEcccEEEEcCCc----eEEEEecccceEEECCEEECHHHHHHHHHh
Confidence 4455662 35899999999999 799999999986656666666677776643
No 265
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=62.95 E-value=3.3 Score=31.71 Aligned_cols=49 Identities=16% Similarity=0.207 Sum_probs=35.7
Q ss_pred hHHHHhC--CccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHH
Q 034345 20 DVARDFG--AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAI 72 (97)
Q Consensus 20 ~va~a~g--A~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai 72 (97)
..+++|. --+|-+..-+|.+| .+.|.||+||.-...+..+.-.+++.+|
T Consensus 371 ~t~~~f~~g~~~TGDlg~~~~dG----~l~~~GR~dd~ik~~G~~v~p~eIE~~l 421 (504)
T 1t5h_X 371 ATAEKLQDGWYRTSDVAVWTPEG----TVRILGRVDDMIISGGENIHPSEIERVL 421 (504)
T ss_dssp HHHHHEETTEEEEEEEEEECTTS----CEEEEEEGGGCEEETTEEECHHHHHHHH
T ss_pred hhhhhhcCCccccCcEEEECCCc----eEEEeCcccCEEEECCEEECHHHHHHHH
Confidence 4455552 34788889999999 6999999999865556555556666555
No 266
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=62.55 E-value=3.2 Score=32.24 Aligned_cols=51 Identities=6% Similarity=0.057 Sum_probs=20.0
Q ss_pred hHHHHh---CCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHH
Q 034345 20 DVARDF---GAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (97)
Q Consensus 20 ~va~a~---gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~a 74 (97)
..++.| |--+|-+..-+|.+| .+.+.||.||.-...+..+.-.+++++|.+
T Consensus 407 ~t~~~~~~~g~~~TGDl~~~~~dG----~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~ 460 (550)
T 3rix_A 407 ATNALIDKDGWLHSGDIAYWDEDE----HFFIVDRLKSLIKYKGYQVAPAELESILLQ 460 (550)
T ss_dssp HHHHHBCTTSCEEEEEEEEECTTC----CEEEC-------------------------
T ss_pred hhhhhcCCCCCeecCcEEEEeCCc----eEEEEecchheeEECCEEECHHHHHHHHHh
Confidence 344555 235899999999999 799999999986655555545556655543
No 267
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=62.28 E-value=3.2 Score=32.66 Aligned_cols=51 Identities=16% Similarity=0.139 Sum_probs=37.1
Q ss_pred hHHHHh--CCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHH
Q 034345 20 DVARDF--GAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (97)
Q Consensus 20 ~va~a~--gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~a 74 (97)
..++.| |--+|-+..-+|.+| .+.|.||.||.-...+..+.-.+++.+|.+
T Consensus 425 ~t~~~f~~~~~~TGDlg~~d~dG----~l~~~GR~dd~Ik~~G~~V~p~eIE~~l~~ 477 (570)
T 3c5e_A 425 KTAANIRGDFWLLGDRGIKDEDG----YFQFMGRADDIINSSGYRIGPSEVENALME 477 (570)
T ss_dssp HHHHTEETTEEEEEEEEEECTTS----CEEEEEEGGGCEEETTEEECHHHHHHHHHT
T ss_pred HhhhhhcCCccccceeEEEcCCc----eEEEEecCCCEEEECCEEECHHHHHHHHHh
Confidence 344555 234788999999999 699999999986656666666677766543
No 268
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=61.75 E-value=3.8 Score=32.85 Aligned_cols=44 Identities=16% Similarity=0.097 Sum_probs=35.9
Q ss_pred CccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHH
Q 034345 27 AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (97)
Q Consensus 27 A~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~a 74 (97)
--+|=+..-+|.+| .+.+.||+||.-...+..+.-.+++.+|.+
T Consensus 495 ~y~TGDlg~~d~dG----~l~i~GR~dd~Ik~~G~rI~~~eIE~~l~~ 538 (652)
T 1pg4_A 495 MYFSGDGARRDEDG----YYWITGRVDDVLNVSGHRLGTAEIESALVA 538 (652)
T ss_dssp SEEEEEEEEECTTS----CEEEEEESSSEEEETTEEEEHHHHHHHHHH
T ss_pred EEECCcEEEEcCCC----cEEEEecCCCEEEECCEEECHHHHHHHHHh
Confidence 45889999999999 699999999996656666677788887754
No 269
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=60.81 E-value=3.5 Score=32.60 Aligned_cols=51 Identities=16% Similarity=0.281 Sum_probs=37.2
Q ss_pred hhHHHHhC---CccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHH
Q 034345 19 QDVARDFG---AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIE 73 (97)
Q Consensus 19 q~va~a~g---A~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~ 73 (97)
...++.|. --+|=+..-++++| .+.|.||.||.-...+..+.-.+++.+|.
T Consensus 401 ~~t~~~f~~~~~yrTGDl~~~~~dG----~l~~~GR~dd~iki~G~ri~~~eIE~~l~ 454 (617)
T 3rg2_A 401 QHNASAFDANGFYCSGDLISIDPEG----YITVQGREKDQINRGGEKIAAEEIENLLL 454 (617)
T ss_dssp HHHHHHBCTTSCEEEEEEEEECTTS----CEEEEEECSSEEEETTEEEEHHHHHHHHT
T ss_pred hhhhhccCCCCceecCceEEEcCCc----eEEEEeecCCEEEECCEEeCHHHHHHHHH
Confidence 34566663 24788999999999 79999999999665565555566666553
No 270
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=60.20 E-value=4.2 Score=29.72 Aligned_cols=38 Identities=13% Similarity=0.255 Sum_probs=29.2
Q ss_pred EEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeee
Q 034345 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQ 51 (97)
Q Consensus 13 vL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~ 51 (97)
+-+|.+...++.|+....|+++++++++.. ...+|.|.
T Consensus 305 ~~vd~~~~~~~~~~v~~~Pt~~~~~~~~~~-~~~~~~G~ 342 (361)
T 3uem_A 305 AKMDSTANEVEAVKVHSFPTLKFFPASADR-TVIDYNGE 342 (361)
T ss_dssp EEEETTTCBCSSCCCCSSSEEEEECSSSSC-CCEECCSC
T ss_pred EEEECCccchhhcCCcccCeEEEEECCCCc-ceeEecCC
Confidence 346877777899999999999999766321 26888885
No 271
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=59.61 E-value=3.4 Score=33.08 Aligned_cols=43 Identities=14% Similarity=0.119 Sum_probs=33.4
Q ss_pred ccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHH
Q 034345 28 ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (97)
Q Consensus 28 ~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~a 74 (97)
-+|=+..-+|++| .+.|.||.||.-...+..+.-.+++.+|.+
T Consensus 398 yrTGDl~~~~~dG----~l~~~GR~dd~Ik~~G~ri~~~eIE~~l~~ 440 (620)
T 4dg8_A 398 YRTGDRARYDEQG----RLRFIGRGDGQVKLNGYRLDLPALEQRFRR 440 (620)
T ss_dssp EEEEEEEEECTTS----CEEEEECSSSEEEETTEEEEHHHHHHHHHT
T ss_pred EeCCCEEEECCCC----eEEEEccCCCEEEECCEEcCHHHHHHHHHh
Confidence 4788888899999 799999999996656666666677766643
No 272
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=58.90 E-value=5 Score=31.66 Aligned_cols=50 Identities=18% Similarity=0.221 Sum_probs=36.7
Q ss_pred hHHHHhC--CccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHH
Q 034345 20 DVARDFG--AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIE 73 (97)
Q Consensus 20 ~va~a~g--A~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~ 73 (97)
..++.|. --+|-+..-+|.+| .+.|.||+||.-...+..+.-.+++.+|.
T Consensus 444 ~t~~~f~~gwy~TGDlg~~d~dG----~l~~~GR~dd~Ik~~G~~I~p~eIE~~l~ 495 (580)
T 3etc_A 444 RTEETWHDGYYHTGDMAWMDEDG----YLWFVGRADDIIKTSGYKVGPFEVESALI 495 (580)
T ss_dssp HHHHHEETTEEEEEEEEEECTTS----CEEEEEESSSCEEETTEEECHHHHHHHHT
T ss_pred HHHhhcCCCEEecCcEEEECCCC----cEEEEecCCCEEEECCEEECHHHHHHHHH
Confidence 4455553 25788999999999 69999999999665566666667776553
No 273
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=58.11 E-value=4.3 Score=31.29 Aligned_cols=49 Identities=18% Similarity=0.115 Sum_probs=36.1
Q ss_pred hHHHHhC--CccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHH
Q 034345 20 DVARDFG--AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAI 72 (97)
Q Consensus 20 ~va~a~g--A~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai 72 (97)
..++.|. --+|-+..-+|.+| .+.|.||.||.-...+..+.-.+++.+|
T Consensus 382 ~t~~~f~~g~~~TGDl~~~~~dG----~l~~~GR~dd~ik~~G~~v~p~eIE~~l 432 (517)
T 3r44_A 382 ATRDAFDNGWFRTGDIGEIDDEG----YLYIKDRLKDMIISGGENVYPAEIESVI 432 (517)
T ss_dssp HHHHTEETTEEEEEEEEEECTTS----CEEEEECGGGCEEETTEEECHHHHHHHH
T ss_pred hhHhhhcCCCEecceeEEEcCCe----eEEEecCCcCEEEECCEEECHHHHHHHH
Confidence 4455553 24788999999999 6999999999966566665556666655
No 274
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=56.27 E-value=11 Score=27.12 Aligned_cols=34 Identities=21% Similarity=0.559 Sum_probs=25.8
Q ss_pred hhhHHHHhCCc--cCceEEEEecCCC-CCeeEEEeeecC
Q 034345 18 SQDVARDFGAA--CTPEFFLFKKDGR-RPFQLVYHGQFD 53 (97)
Q Consensus 18 ~q~va~a~gA~--~TPe~fvld~~g~-~~~~l~Y~G~ID 53 (97)
..++++.||.. ..|+++++.. |. . ....|.|..+
T Consensus 70 ~~~l~~~~~V~~~~~PTl~~f~~-G~~~-~~~~y~G~~~ 106 (240)
T 2qc7_A 70 NMELSEKYKLDKESYPVFYLFRD-GDFE-NPVPYTGAVK 106 (240)
T ss_dssp SHHHHHHTTCCGGGCSEEEEEET-TCSS-CCEECCSCSC
T ss_pred hHHHHHHcCCCCCCCCEEEEEeC-CCcC-cceeecCCCC
Confidence 57899999999 9999999954 42 1 1468888543
No 275
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=56.14 E-value=7.2 Score=26.95 Aligned_cols=46 Identities=20% Similarity=0.270 Sum_probs=29.5
Q ss_pred hhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034345 18 SQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (97)
Q Consensus 18 ~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG 78 (97)
+.+.|+++|+..||.+ +++.+|. .-.+.|+ +. -..++++|.....|
T Consensus 171 ~~~~a~~~gv~G~Ptf-vv~~~g~---~~~~~G~--~~---------~~~l~~~l~~~~~~ 216 (226)
T 1r4w_A 171 TTGAACKYGAFGLPTT-VAHVDGK---TYMLFGS--DR---------MELLAYLLGEKWMG 216 (226)
T ss_dssp HHHHHHHTTCCSSCEE-EEEETTE---EEEEEST--TC---------HHHHHHHHTCCCCC
T ss_pred HHHHHHHCCCCCCCEE-EEeCCCC---cCceeCC--Cc---------HHHHHHHhcCcccC
Confidence 4566889999999997 5566652 1356674 11 33677777655555
No 276
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=54.92 E-value=20 Score=27.68 Aligned_cols=52 Identities=13% Similarity=0.227 Sum_probs=37.9
Q ss_pred EEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 14 TLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 14 L~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
+.|..+.++++||+.- -.++|+-++| -+.+|+. .. +. .....|++|+.++|.
T Consensus 483 ~~d~~~~~~~~~~~~~-~~~~lvRPD~----~va~r~~--~~-~~----~~~~~l~~~~~~~l~ 534 (535)
T 3ihg_A 483 LTDPESAVSERYGIGK-AGASLVRPDG----IVAWRTD--EA-AA----DAAQTLEGVLRRVLD 534 (535)
T ss_dssp BBCSSCCHHHHHTCTT-TCEEEECTTS----BEEEEES--SC-CS----SHHHHHHHHHHHHTT
T ss_pred cccCcchHHHHhCCCC-CceEeeCCCc----eeEEecC--CC-CC----CHHHHHHHHHHHHhc
Confidence 4577888999998654 3489999999 6889985 11 11 124579999999885
No 277
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=53.19 E-value=4.7 Score=28.30 Aligned_cols=33 Identities=12% Similarity=0.351 Sum_probs=25.3
Q ss_pred hhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecC
Q 034345 18 SQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFD 53 (97)
Q Consensus 18 ~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~ID 53 (97)
...+++.|+...+|+++++. +|+ ..-+|.|..+
T Consensus 161 ~~~l~~~~~i~~~PTl~~~~-~G~--~v~~~~G~~~ 193 (217)
T 2trc_P 161 NTGAGDRFSSDVLPTLLVYK-GGE--LISNFISVAE 193 (217)
T ss_dssp HHTCSTTSCGGGCSEEEEEE-TTE--EEEEETTGGG
T ss_pred cHHHHHHCCCCCCCEEEEEE-CCE--EEEEEeCCcc
Confidence 45688899999999999996 674 3456777654
No 278
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=52.82 E-value=4.9 Score=31.53 Aligned_cols=41 Identities=17% Similarity=0.221 Sum_probs=32.2
Q ss_pred ccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHH
Q 034345 28 ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAI 72 (97)
Q Consensus 28 ~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai 72 (97)
-+|-+...+|.+| .+.+.||.||.-..++..+.-.+++++|
T Consensus 409 ~~TGDlg~~d~dG----~l~i~GR~~d~Ik~~G~~V~p~eIE~~l 449 (563)
T 1amu_A 409 YKTGDQARWLSDG----NIEYLGRIDNQVKIRGHRVELEEVESIL 449 (563)
T ss_dssp EEEEEEEEECTTS----CEEEEEEGGGEEEETTEEEEHHHHHHHH
T ss_pred EecCCEEEEcCCC----eEEEeccccCEEEECCEEeCHHHHHHHH
Confidence 4788889999999 6999999999865566666666666655
No 279
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=52.42 E-value=7.7 Score=32.48 Aligned_cols=50 Identities=12% Similarity=0.129 Sum_probs=25.3
Q ss_pred hHHHHhC---CccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHH
Q 034345 20 DVARDFG---AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIE 73 (97)
Q Consensus 20 ~va~a~g---A~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~ 73 (97)
..++.|. --+|=+..-+|++| .+.|.||.||.-...+..+.-.+++.+|.
T Consensus 449 ~t~~~f~~~g~~~TGDl~~~~~dG----~l~~~GR~dd~ik~~G~~v~~~eIE~~l~ 501 (979)
T 3tsy_A 449 ATAETIDKDGWLHTGDIGLIDDDD----ELFIVDRLKELIKYKGFQVAPAELEALLI 501 (979)
T ss_dssp HHHHHBCTTSCEEEEEEEEECTTS----CEEEEEESCC-------------------
T ss_pred hhhhhccCCCcEEcCCEEEEcCCc----eEEEecCCCCEEEECCEEECHHHHHHHHH
Confidence 4556663 35899999999999 69999999998665555544455555543
No 280
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=51.32 E-value=6.7 Score=28.42 Aligned_cols=32 Identities=13% Similarity=0.357 Sum_probs=24.3
Q ss_pred hhHHHHhCCccCceEEEEecCCCCCeeEEEeeecC
Q 034345 19 QDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFD 53 (97)
Q Consensus 19 q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~ID 53 (97)
..+++.|+...+|+++++. +|+ ..-++.|..+
T Consensus 175 ~~l~~~~~I~~~PTll~~~-~G~--~v~~~vG~~~ 206 (245)
T 1a0r_P 175 TGAGDRFSSDVLPTLLVYK-GGE--LLSNFISVTE 206 (245)
T ss_dssp HCCTTSSCTTTCSEEEEEE-TTE--EEEEETTGGG
T ss_pred HHHHHHCCCCCCCEEEEEE-CCE--EEEEEeCCcc
Confidence 4578899999999998886 774 3446778754
No 281
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=50.75 E-value=6.3 Score=23.73 Aligned_cols=17 Identities=24% Similarity=0.427 Sum_probs=14.4
Q ss_pred hhHHHHhCCccCceEEE
Q 034345 19 QDVARDFGAACTPEFFL 35 (97)
Q Consensus 19 q~va~a~gA~~TPe~fv 35 (97)
.++++.||...+|.+|+
T Consensus 63 ~~l~~~~~v~~~Pt~~~ 79 (116)
T 2e7p_A 63 SALAHWTGRGTVPNVFI 79 (116)
T ss_dssp HHHHHHHSCCSSCEEEE
T ss_pred HHHHHHhCCCCcCEEEE
Confidence 35899999999999954
No 282
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=50.74 E-value=12 Score=27.17 Aligned_cols=45 Identities=18% Similarity=0.304 Sum_probs=31.1
Q ss_pred hhhHHHHhCCc--cCceEEEEecCCC-CCeeEEE--eeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 18 SQDVARDFGAA--CTPEFFLFKKDGR-RPFQLVY--HGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 18 ~q~va~a~gA~--~TPe~fvld~~g~-~~~~l~Y--~G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
..++++.||.. ..|+++++. |. . ....| .|.. +...|.+-|+..+
T Consensus 82 n~~la~~~~V~~~~~PTl~~F~--G~~~-~~~~y~~~G~~-----------~~~~L~~fi~~~~ 131 (248)
T 2c0g_A 82 NKALGDRYKVDDKNFPSIFLFK--GNAD-EYVQLPSHVDV-----------TLDNLKAFVSANT 131 (248)
T ss_dssp THHHHHHTTCCTTSCCEEEEES--SSSS-SEEECCTTSCC-----------CHHHHHHHHHHHS
T ss_pred cHHHHHHhCCCcCCCCeEEEEe--CCcC-cceeecccCCC-----------CHHHHHHHHHHhh
Confidence 57899999999 999999997 63 1 13667 6643 2335666666553
No 283
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=50.65 E-value=3.5 Score=32.03 Aligned_cols=43 Identities=14% Similarity=0.159 Sum_probs=31.4
Q ss_pred ccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHH
Q 034345 28 ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (97)
Q Consensus 28 ~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~a 74 (97)
-+|=+..-+|.+| .+.|.||+||.-..++..+.-.+++.+|.+
T Consensus 414 ~~TGDlg~~d~dG----~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~ 456 (541)
T 1v25_A 414 FRTGDIAVWDEEG----YVEIKDRLKDLIKSGGEWISSVDLENALMG 456 (541)
T ss_dssp EEEEEEEEECTTC----CEEEEEESSCEEEETTEEEEHHHHHCC---
T ss_pred eEcCCEEEEcCCc----eEEEeecccceeeeCCEEECHHHHHHHHHh
Confidence 5788888999999 699999999986555655555666665543
No 284
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=50.24 E-value=12 Score=27.93 Aligned_cols=27 Identities=19% Similarity=0.481 Sum_probs=21.9
Q ss_pred hhhHHHHhCCccCceEEEEecCCCCCeeEEEeeec
Q 034345 18 SQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQF 52 (97)
Q Consensus 18 ~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~I 52 (97)
..+++++||.+..|+.|+ +| + +|.|..
T Consensus 240 ~~~la~~~gI~~vPT~~i---~G----~-~~~G~~ 266 (291)
T 3kp9_A 240 QAQECTEAGITSYPTWII---NG----R-TYTGVR 266 (291)
T ss_dssp CCHHHHTTTCCSTTEEEE---TT----E-EEESCC
T ss_pred HHHHHHHcCCcccCeEEE---CC----E-EecCCC
Confidence 679999999999999666 66 4 388864
No 285
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=49.68 E-value=8.7 Score=29.31 Aligned_cols=50 Identities=20% Similarity=0.240 Sum_probs=22.9
Q ss_pred hHHHHhC--CccCceEEEEecCCCCCeeEEEeeec--CCCCCCCCCCCcHHHHHHHHH
Q 034345 20 DVARDFG--AACTPEFFLFKKDGRRPFQLVYHGQF--DDSRPSNNLPVTGRDIRLAIE 73 (97)
Q Consensus 20 ~va~a~g--A~~TPe~fvld~~g~~~~~l~Y~G~I--Dd~~~~~~~~~t~~~L~~Ai~ 73 (97)
..++.|. --+|-+..-+|++| .+.|.||. ||.-..++..+.-.+++.+|.
T Consensus 367 ~t~~~f~~g~~~TGDl~~~~~dG----~l~~~GR~d~~d~ik~~G~~v~p~eiE~~l~ 420 (509)
T 3ivr_A 367 ATQHAFRNGWHHTGDMGRFDADG----YLFYAGRAPEKELIKTGGENVYPAEVEGALK 420 (509)
T ss_dssp HHHHHTGGGSEEEEEEEEECTTS----CEEEEEEC-----------------------
T ss_pred HhHHHhhcCCcccccEEEECCCc----eEEEeCCCCcceeEEECCEEECHHHHHHHHH
Confidence 4455553 35789999999999 69999999 554433444444445555443
No 286
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=49.42 E-value=9.9 Score=25.87 Aligned_cols=17 Identities=29% Similarity=0.583 Sum_probs=14.9
Q ss_pred hhHHHHhCCccCceEEE
Q 034345 19 QDVARDFGAACTPEFFL 35 (97)
Q Consensus 19 q~va~a~gA~~TPe~fv 35 (97)
.+.|+++|...||++||
T Consensus 144 ~~~a~~~GV~gtPtf~i 160 (182)
T 3gn3_A 144 TKYARQNGIHVSPTFMI 160 (182)
T ss_dssp HHHHHHHTCCSSSEEEE
T ss_pred HHHHHHCCCCccCEEEE
Confidence 35788999999999998
No 287
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=47.93 E-value=16 Score=28.46 Aligned_cols=30 Identities=17% Similarity=0.249 Sum_probs=24.6
Q ss_pred eChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeec
Q 034345 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQF 52 (97)
Q Consensus 16 D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~I 52 (97)
|..++++..||...+|++|+ +| +....|+.
T Consensus 157 ~~~~~~~~~~~i~svPt~~i---~g----~~~~~G~~ 186 (521)
T 1hyu_A 157 GTFQNEITERNVMGVPAVFV---NG----KEFGQGRM 186 (521)
T ss_dssp TTCHHHHHHTTCCSSSEEEE---TT----EEEEESCC
T ss_pred hhhHHHHHHhCCCccCEEEE---CC----EEEecCCC
Confidence 57789999999999999988 66 56677763
No 288
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=46.63 E-value=13 Score=20.91 Aligned_cols=16 Identities=25% Similarity=0.652 Sum_probs=14.1
Q ss_pred hHHHHhC--CccCceEEE
Q 034345 20 DVARDFG--AACTPEFFL 35 (97)
Q Consensus 20 ~va~a~g--A~~TPe~fv 35 (97)
++++.+| ...+|.+|+
T Consensus 47 ~l~~~~~~~~~~vP~i~~ 64 (85)
T 1ego_A 47 DLQQKAGKPVETVPQIFV 64 (85)
T ss_dssp HHHHHTCCCSCCSCEEEE
T ss_pred HHHHHhCCCCceeCeEEE
Confidence 7899999 899999865
No 289
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=46.63 E-value=11 Score=29.02 Aligned_cols=50 Identities=20% Similarity=0.155 Sum_probs=34.6
Q ss_pred hHHHHhC---CccCceEEEEecCCCCCeeEEEeeecC-CCCCCCCCCCcHHHHHHHHH
Q 034345 20 DVARDFG---AACTPEFFLFKKDGRRPFQLVYHGQFD-DSRPSNNLPVTGRDIRLAIE 73 (97)
Q Consensus 20 ~va~a~g---A~~TPe~fvld~~g~~~~~l~Y~G~ID-d~~~~~~~~~t~~~L~~Ai~ 73 (97)
..++.|. --+|=+..-+|++| .+.|.||.| |.-...+..+.-.+++.+|.
T Consensus 373 ~t~~~f~~~g~y~TGDl~~~~~dG----~l~~~GR~~d~~ik~~G~~v~~~eIE~~l~ 426 (505)
T 3nyq_A 373 ATAAAFTEDGFFRTGDMAVRDPDG----YVRIVGRKATDLIKSGGYKIGAGEIENALL 426 (505)
T ss_dssp HHHHTBCTTSCEEEEEEEEECTTS----CEEEEEESSCCCEEETTEEECHHHHHHHHT
T ss_pred HhhhhhcCCCCCccCCeEEECCCc----cEEEeCCccCceEEeCCEEECHHHHHHHHH
Confidence 4455563 35888999999999 799999985 55444555555566666553
No 290
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=43.06 E-value=9.4 Score=33.21 Aligned_cols=42 Identities=19% Similarity=0.291 Sum_probs=33.0
Q ss_pred cCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHH
Q 034345 29 CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (97)
Q Consensus 29 ~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~a 74 (97)
+|-+..-++++| .+.|.||+||.-...+..+.-.+++.+|.+
T Consensus 841 rTGDl~~~~~dG----~l~~~GR~d~qvki~G~rie~~eIE~~l~~ 882 (1304)
T 2vsq_A 841 RTGDLARWLPDG----TIEYAGRIDDQVKIRGHRIELEEIEKQLQE 882 (1304)
T ss_dssp EEEEEEEECTTS----CEEEEEEGGGEEEETTEEEEHHHHHHHHHH
T ss_pred ecCCeEEEcCCC----eEEEEcCCCCEEEECCEeeCHHHHHHHHHh
Confidence 677888889999 699999999996656666666677777654
No 291
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=42.17 E-value=14 Score=24.99 Aligned_cols=20 Identities=25% Similarity=0.418 Sum_probs=16.8
Q ss_pred eChhhHHHHhCCccCceEEE
Q 034345 16 FQSQDVARDFGAACTPEFFL 35 (97)
Q Consensus 16 D~~q~va~a~gA~~TPe~fv 35 (97)
..+.+.|+++|...||.+||
T Consensus 138 ~~~~~~a~~~gv~gtPtfvv 157 (191)
T 3l9s_A 138 AQQEKAAADLQLQGVPAMFV 157 (191)
T ss_dssp HHHHHHHHHTTCCSSSEEEE
T ss_pred HHHHHHHHHhCCcccCEEEE
Confidence 34567789999999999998
No 292
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=40.93 E-value=65 Score=20.13 Aligned_cols=51 Identities=12% Similarity=0.411 Sum_probs=33.2
Q ss_pred EEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHH
Q 034345 14 TLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAI 72 (97)
Q Consensus 14 L~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai 72 (97)
-+|-+.. +..|+....|+++++. +|+ ..-++.|..+-. +...+...|+..|
T Consensus 59 kvd~d~~-~~~~~v~~~PT~~~fk-~G~--~v~~~~G~~~~g----g~~~~~~~le~~L 109 (118)
T 3evi_A 59 KAIVNSC-IQHYHDNCLPTIFVYK-NGQ--IEAKFIGIIECG----GINLKLEELEWKL 109 (118)
T ss_dssp EEEGGGT-STTCCGGGCSEEEEEE-TTE--EEEEEESTTTTT----CSSCCHHHHHHHH
T ss_pred EEEhHHh-HHHCCCCCCCEEEEEE-CCE--EEEEEeChhhhC----CCCCCHHHHHHHH
Confidence 4566644 7999999999998885 564 466777775433 1234555665544
No 293
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=40.60 E-value=13 Score=28.33 Aligned_cols=42 Identities=17% Similarity=0.195 Sum_probs=32.0
Q ss_pred ccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHH
Q 034345 28 ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (97)
Q Consensus 28 ~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~a 74 (97)
-+|=+...+ .+| .+.+.||.||.-..++..+.-.+++++|.+
T Consensus 379 ~~TGDlg~~-~dG----~l~i~GR~~d~ik~~G~~v~p~eIE~~l~~ 420 (512)
T 3fce_A 379 YKTGDAGYV-ENG----LLFYNGRLDFQIKLHGYRMELEEIEHHLRA 420 (512)
T ss_dssp EEEEEEEEE-ETT----EEEEEEEGGGCEEETTEEECHHHHHHHHHH
T ss_pred EeCCceEEe-cCC----EEEEecccCCEEEECCEEECHHHHHHHHHh
Confidence 467776666 577 799999999997666666667788877755
No 294
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=38.87 E-value=30 Score=24.17 Aligned_cols=47 Identities=19% Similarity=0.232 Sum_probs=30.9
Q ss_pred ChhhHHHHhCCccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034345 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (97)
Q Consensus 17 ~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG 78 (97)
.+.+.|.++|+..||.++| +.+|+ .-.|-|. |. -..|+++|.....|
T Consensus 170 ~~~~~a~~~Gv~GvPtfvv-~~~g~---~~~f~G~--dr---------l~~l~~~L~~~~~~ 216 (234)
T 3rpp_A 170 ETTEAACRYGAFGLPITVA-HVDGQ---THMLFGS--DR---------MELLAHLLGEKWMG 216 (234)
T ss_dssp HHHHHHHHTTCSSSCEEEE-EETTE---EEEEESS--SC---------HHHHHHHHTCCCCC
T ss_pred HHHHHHHHcCCCCCCEEEE-eCCCC---cCceeCc--cC---------HHHHHHHhccccCC
Confidence 3456678899999999866 65672 2778884 22 23566666554444
No 295
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=38.83 E-value=52 Score=23.45 Aligned_cols=38 Identities=8% Similarity=0.083 Sum_probs=29.4
Q ss_pred ceeEEEeChhhHHHHhCCccCce---------EEEEecCCCCCeeEEEeeec
Q 034345 10 MWLITLFQSQDVARDFGAACTPE---------FFLFKKDGRRPFQLVYHGQF 52 (97)
Q Consensus 10 ~fpvL~D~~q~va~a~gA~~TPe---------~fvld~~g~~~~~l~Y~G~I 52 (97)
.++.|-|.++++++++|...... ++|+| +| ++.|..--
T Consensus 134 ~i~~laD~~~eftkalGl~~~~~~gg~RS~Rya~IVd-DG----vV~~~~vE 180 (199)
T 4h86_A 134 HIKFASDPGCAFTKSIGFELAVGDGVYWSGRWAMVVE-NG----IVTYAAKE 180 (199)
T ss_dssp SEEEEECGGGHHHHHTTCEEEEETTEEEECSEEEEEE-TT----EEEEEEEC
T ss_pred cccccCCcchHHHHhcCceeecCCCcceeeEEEEEEE-CC----EEEEEEEe
Confidence 58889999999999999754322 57887 77 78888643
No 296
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=38.29 E-value=29 Score=23.42 Aligned_cols=27 Identities=22% Similarity=0.320 Sum_probs=20.7
Q ss_pred ChhhHHHHhCCccCceEEEEecCCCCCeeEEEeee
Q 034345 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQ 51 (97)
Q Consensus 17 ~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~ 51 (97)
.+.+.|+++|+..||.++| +| + .+.|+
T Consensus 161 ~~~~~a~~~Gv~GvPtfvv---~g----~-~~~G~ 187 (202)
T 3fz5_A 161 KIGEDAVARGIFGSPFFLV---DD----E-PFWGW 187 (202)
T ss_dssp HHHHHHHHTTCCSSSEEEE---TT----E-EEESG
T ss_pred HHHHHHHHCCCCcCCEEEE---CC----E-EEecC
Confidence 3456778999999999888 55 4 57785
No 297
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=37.80 E-value=18 Score=27.70 Aligned_cols=43 Identities=21% Similarity=0.115 Sum_probs=31.2
Q ss_pred CccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHH
Q 034345 27 AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (97)
Q Consensus 27 A~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~a 74 (97)
--+|-+..-+ .+| .+.|.||.||.-...+..+.-.+++.+|.+
T Consensus 440 ~~~TGDl~~~-~dG----~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~ 482 (576)
T 3gqw_A 440 WLDTGDLGYL-LDG----YLYVTGRIKDLIIIRGRNIWPQDIEYIAEQ 482 (576)
T ss_dssp CEEEEEEEEE-ETT----EEEEEEETTTCEEETTEEECHHHHHHHHTT
T ss_pred eeeccceEEE-ECC----EEEEEecCcceEEECCEEECHHHHHHHHHh
Confidence 3577888777 577 799999999986555666656667665543
No 298
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=37.50 E-value=49 Score=26.84 Aligned_cols=46 Identities=11% Similarity=0.190 Sum_probs=35.3
Q ss_pred hhhHHHHhCCcc-CceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034345 18 SQDVARDFGAAC-TPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (97)
Q Consensus 18 ~q~va~a~gA~~-TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLa 77 (97)
.+.+.+.||... ...++|+-++| -+.+++.+|+. ..|..+++.++.
T Consensus 600 ~~~~~~~~g~~~~~g~~vlvRPD~----yV~~~~~~~~~----------~~l~~~~~~~~~ 646 (665)
T 1pn0_A 600 HPKSYQAWGVDETKGAVVVVRPDG----YTSLVTDLEGT----------AEIDRYFSGILV 646 (665)
T ss_dssp CCCHHHHHTBCTTTCEEEEECTTS----BEEEEECTTTH----------HHHHHHHHTTBC
T ss_pred cccHHHHcCCCCCCceEEEECCCC----cEEEEeccccH----------HHHHHHHHHHhc
Confidence 467999999765 67889999999 68888886653 367777777664
No 299
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=36.23 E-value=8.8 Score=29.68 Aligned_cols=40 Identities=15% Similarity=0.171 Sum_probs=29.5
Q ss_pred ccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHH
Q 034345 28 ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAI 72 (97)
Q Consensus 28 ~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai 72 (97)
-+|=+...+| +| .+.|.||.||.-...+..+.-.+++.+|
T Consensus 438 ~~TGDlg~~d-dG----~l~~~GR~dd~Ik~~G~~v~p~eIE~~l 477 (590)
T 3kxw_A 438 LRTGDLGFLH-EN----ELYVTGRIKDLIIIYGKNHYPQDIEFSL 477 (590)
T ss_dssp EEEEEEEEEE-TT----EEEEEEESSCHHHHHHHTTHHHHHHHHH
T ss_pred EecCcEEEEE-CC----EEEEEcCccceEEECCEecCHHHHHHHH
Confidence 4889999999 88 7999999999854344444445666655
No 300
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=36.02 E-value=20 Score=27.29 Aligned_cols=42 Identities=17% Similarity=0.214 Sum_probs=32.1
Q ss_pred ccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHH
Q 034345 28 ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (97)
Q Consensus 28 ~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~a 74 (97)
-+|=+...++ +| .+.+.||.||.-..++..+.-.+++.+|.+
T Consensus 378 ~~TGDlg~~~-dG----~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~ 419 (511)
T 3e7w_A 378 YRTGDAGFIQ-DG----QIFCQGRLDFQIKLHGYRMELEEIEFHVRQ 419 (511)
T ss_dssp EEEEEEEEEE-TT----EEEEEEESSSEEEETTEEEEHHHHHHHHHH
T ss_pred EeCCCeEEcc-CC----eEEEEccccCEEEECCEEeCHHHHHHHHHh
Confidence 4677777774 77 799999999986666666667788877755
No 301
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=31.78 E-value=59 Score=23.56 Aligned_cols=32 Identities=9% Similarity=0.099 Sum_probs=25.7
Q ss_pred ChhhHHHHhCCccCceEEEEecCCCCCeeEEEeee
Q 034345 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQ 51 (97)
Q Consensus 17 ~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~ 51 (97)
.+.++++.||.. .|.+.++.+.+.+ .+.|.|.
T Consensus 178 ~~~~~~~~~~v~-~p~i~~~~~~~~~--~~~y~g~ 209 (350)
T 1sji_A 178 FDKGVAKKLSLK-MNEVDFYEPFMDE--PIAIPDK 209 (350)
T ss_dssp CCHHHHHHHTCC-TTCEEEECTTCSS--CEECSSS
T ss_pred CCHHHHHHcCCC-CCcEEEEeCCCCC--ceecCCC
Confidence 455799999999 9999999885443 6889986
No 302
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=31.07 E-value=31 Score=18.64 Aligned_cols=20 Identities=10% Similarity=0.119 Sum_probs=13.7
Q ss_pred eChhhHHH---HhCCccCceEEE
Q 034345 16 FQSQDVAR---DFGAACTPEFFL 35 (97)
Q Consensus 16 D~~q~va~---a~gA~~TPe~fv 35 (97)
|.+.+.+. .+|...+|.+++
T Consensus 34 ~~~~~~~~~~~~~~~~~vP~l~~ 56 (75)
T 1r7h_A 34 SLDDEARDYVMALGYVQAPVVEV 56 (75)
T ss_dssp TTCHHHHHHHHHTTCBCCCEEEE
T ss_pred CCCHHHHHHHHHcCCCccCEEEE
Confidence 33334444 799999999873
No 303
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=30.59 E-value=80 Score=21.77 Aligned_cols=59 Identities=14% Similarity=0.260 Sum_probs=35.0
Q ss_pred cceeEEEeCh--hhHHHHhCC----ccCceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCC
Q 034345 9 LMWLITLFQS--QDVARDFGA----ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQP 80 (97)
Q Consensus 9 ~~fpvL~D~~--q~va~a~gA----~~TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~ 80 (97)
+.|-+ .|.+ +.+.+.||. .-.|.+.++|.++. .|. .++.... ....|++=++.+++|+-
T Consensus 169 ~~F~~-~d~~~~~~~~~~fgl~~~~~~~P~v~i~~~~~~-----ky~--~~~~~t~-----~~~~i~~F~~~~~~Gkl 233 (252)
T 2h8l_A 169 LNFAV-ASRKTFSHELSDFGLESTAGEIPVVAIRTAKGE-----KFV--MQEEFSR-----DGKALERFLQDYFDGNL 233 (252)
T ss_dssp CEEEE-EETTTTHHHHGGGTCCCCSCSSCEEEEECTTSC-----EEE--CCSCCCT-----TSHHHHHHHHHHHHTCS
T ss_pred EEEEE-EchHHHHHHHHHcCCCCccCCCCEEEEEeCcCc-----Eec--CCcccCc-----chHHHHHHHHHHHCCCc
Confidence 44443 3443 346778898 35899999987652 453 3222111 11128888889999865
No 304
>1t0f_A Transposon TN7 transposition protein TNSA; protein-protein complex, mixed alpha-beta, DNA binding protein; 1.85A {Escherichia coli} SCOP: a.4.5.27 c.52.1.16 PDB: 1f1z_A
Probab=29.68 E-value=20 Score=26.28 Aligned_cols=32 Identities=22% Similarity=0.316 Sum_probs=25.6
Q ss_pred eeEEEeChhhHHHHhCCc----------cCceEEEEecCCCC
Q 034345 11 WLITLFQSQDVARDFGAA----------CTPEFFLFKKDGRR 42 (97)
Q Consensus 11 fpvL~D~~q~va~a~gA~----------~TPe~fvld~~g~~ 42 (97)
||.+.+.+.++|+..|-. -||+++|.-.+|.+
T Consensus 86 ~Pl~~~~t~~ia~~~g~~hp~~~~~p~~~TpDFLv~~~~g~~ 127 (276)
T 1t0f_A 86 FPLLPSDTRQIAIDSGIKHPVIRGVDQVMSTDFLVDCKDGPF 127 (276)
T ss_dssp EECCHHHHHHHHHHHTCCCCEETTEECCCEEEEEEEESSSSC
T ss_pred cCCChHHHHhHHHHcCCcCCCCCCCceEEcCCEEEEEeCCCC
Confidence 676667788999999955 47999999888764
No 305
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=29.15 E-value=93 Score=19.71 Aligned_cols=38 Identities=16% Similarity=0.269 Sum_probs=26.9
Q ss_pred cceeEEEeChhhHHHHhCCccCceEEEEecCCCCCeeEEEeee
Q 034345 9 LMWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQ 51 (97)
Q Consensus 9 ~~fpvL~D~~q~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~ 51 (97)
++|-.. .+.++++.||.. .|.+.|+.+-..+ ...|-|.
T Consensus 68 ~~F~~t--~~~~v~~~~~v~-~~~vvlfkkfde~--~~~~~g~ 105 (124)
T 2l4c_A 68 VSFGIS--TDSEVLTHYNIT-GNTICLFRLVDNE--QLNLEDE 105 (124)
T ss_dssp SEEEEE--CCHHHHHHTTCC-SSCEEEEETTTTE--EEEECHH
T ss_pred ceEEEE--ChHHHHHHcCCC-CCeEEEEEcCCCC--ceeecCc
Confidence 444443 346799999988 7999999874332 6788874
No 306
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=27.82 E-value=27 Score=26.72 Aligned_cols=35 Identities=26% Similarity=0.471 Sum_probs=21.9
Q ss_pred EeChh-hHHHHhCCccCceEEEEecCCCCCeeEEEeee
Q 034345 15 LFQSQ-DVARDFGAACTPEFFLFKKDGRRPFQLVYHGQ 51 (97)
Q Consensus 15 ~D~~q-~va~a~gA~~TPe~fvld~~g~~~~~l~Y~G~ 51 (97)
+|.+. .+.+ |+...+|+++++ ++|+..-..+|.|.
T Consensus 417 vd~~~~~~~~-~~v~~~Pt~~~~-~~G~~~~~~~~~G~ 452 (504)
T 2b5e_A 417 LDHTENDVRG-VVIEGYPTIVLY-PGGKKSESVVYQGS 452 (504)
T ss_dssp EEGGGCCCSS-CCCSSSSEEEEE-CCTTSCCCCBCCSC
T ss_pred ecCCcccccc-CCceecCeEEEE-eCCceecceEecCC
Confidence 45433 3444 999999999999 56631003567774
No 307
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=26.75 E-value=79 Score=17.89 Aligned_cols=17 Identities=18% Similarity=0.147 Sum_probs=14.5
Q ss_pred hhHHHHhCCccCceEEE
Q 034345 19 QDVARDFGAACTPEFFL 35 (97)
Q Consensus 19 q~va~a~gA~~TPe~fv 35 (97)
.++++.+|...+|.+|+
T Consensus 57 ~~l~~~~g~~~vP~l~~ 73 (92)
T 3ic4_A 57 EKVHSISGSYSVPVVVK 73 (92)
T ss_dssp HHHHHHHSSSCSCEEEE
T ss_pred HHHHHhcCCCCcCEEEE
Confidence 56778899999999987
No 308
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=23.55 E-value=26 Score=23.99 Aligned_cols=20 Identities=25% Similarity=0.380 Sum_probs=16.3
Q ss_pred eChhhHHHHhCCccCceEEE
Q 034345 16 FQSQDVARDFGAACTPEFFL 35 (97)
Q Consensus 16 D~~q~va~a~gA~~TPe~fv 35 (97)
+..+..++.+|...||.++|
T Consensus 37 ~~~~~~a~~~gi~gvP~fvi 56 (197)
T 1un2_A 37 AQQEKAAADVQLRGVPAMFV 56 (197)
T ss_dssp HHHHHHHHHTTCCSSSEEEE
T ss_pred HHHHHHHHHcCCCcCCEEEE
Confidence 44567789999999999866
No 309
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera}
Probab=23.06 E-value=94 Score=25.63 Aligned_cols=32 Identities=6% Similarity=0.034 Sum_probs=28.5
Q ss_pred eEEEeeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 034345 45 QLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (97)
Q Consensus 45 ~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alL 76 (97)
++++.||.++--...+++++...+++||....
T Consensus 429 ~i~~~gR~~~~l~~~Geki~~~~v~~av~~a~ 460 (609)
T 4b2g_A 429 QFHFVRRKNVLLSIDSDKTDEAELQKAVDNAS 460 (609)
T ss_dssp EEEEEEETTCCBCSSSCCBCHHHHHHHHHHHH
T ss_pred EEEEEEecCCeEEccccCCCHHHHHHHHHHHH
Confidence 89999999998777789999999999998655
No 310
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=21.61 E-value=1.7e+02 Score=18.79 Aligned_cols=50 Identities=18% Similarity=0.182 Sum_probs=33.0
Q ss_pred hHHHHhCCcc--CceEEEEecCCCCCeeEEEeeecCCCCCCCCCCCcHHHHHHHHHHHHcCCC
Q 034345 20 DVARDFGAAC--TPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQP 80 (97)
Q Consensus 20 ~va~a~gA~~--TPe~fvld~~g~~~~~l~Y~G~IDd~~~~~~~~~t~~~L~~Ai~alLaG~~ 80 (97)
.++..||... .|.+.+++.++. ...|. .+. ...+...|+.=+++.++|+-
T Consensus 79 ~~l~~fGl~~~~~P~v~i~~~~~~---~~Ky~--~~~------~~~t~~~i~~Fv~d~l~GkL 130 (147)
T 3bj5_A 79 RILEFFGLKKEECPAVRLITLEEE---MTKYK--PES------EELTAERITEFCHRFLEGKI 130 (147)
T ss_dssp HHHHHTTCCGGGCSEEEEEECSSS---CEEEC--CSC------CCCCHHHHHHHHHHHHTTCS
T ss_pred HHHHHcCCCcccCCEEEEEecccc---cccCC--CCc------ccCCHHHHHHHHHHHHcCCc
Confidence 5788999774 899989886222 23464 211 12245578888999999954
No 311
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=20.83 E-value=18 Score=26.94 Aligned_cols=45 Identities=18% Similarity=0.095 Sum_probs=29.1
Q ss_pred cCceEEEEecC-CCCCeeE-EEeeecCCCCCCCCCCCcHHHHHHHHH
Q 034345 29 CTPEFFLFKKD-GRRPFQL-VYHGQFDDSRPSNNLPVTGRDIRLAIE 73 (97)
Q Consensus 29 ~TPe~fvld~~-g~~~~~l-~Y~G~IDd~~~~~~~~~t~~~L~~Ai~ 73 (97)
+|=+...+|.+ |.-..++ .+.||.||.-...+..+.-.+++++|.
T Consensus 309 ~TGDl~~~~~~cG~~~~~l~~i~GR~~d~i~~~G~~v~p~eiE~~l~ 355 (443)
T 2y4o_A 309 RTRDLTALLPPTARAMRRLAKITGRSDDMLIVRGVNVFPSQIEEIVV 355 (443)
T ss_dssp EEEEEECEECCSSSSSCEECCCCEESSCCEEETTEEECHHHHHHHHH
T ss_pred ecCCEEEEcCCCCCCccccCccccccCCeEEECCEEECHHHHHHHHH
Confidence 56677788888 7310123 899999998654555555556666554
No 312
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=20.27 E-value=66 Score=19.45 Aligned_cols=16 Identities=19% Similarity=0.355 Sum_probs=14.1
Q ss_pred hHHHHhCCccCceEEE
Q 034345 20 DVARDFGAACTPEFFL 35 (97)
Q Consensus 20 ~va~a~gA~~TPe~fv 35 (97)
++++.+|...+|.+|+
T Consensus 66 ~l~~~~g~~~vP~v~i 81 (114)
T 2hze_A 66 YFEQITGGKTVPRIFF 81 (114)
T ss_dssp HHHHHHSCCSSCEEEE
T ss_pred HHHHHhCCCCcCEEEE
Confidence 6889999999998876
Done!