BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034351
MGPFVLTQVATGLSVLAGAALVKSVMDQKPMAGPFDRCPSCNGTGRVTCMCTRWSDGDVG
CRTCAGSGRMACRSCGGTGTGRPLPVQLSVRRPNRPS

High Scoring Gene Products

Symbol, full name Information P value
AT5G43260 protein from Arabidopsis thaliana 8.7e-40
AT3G44020 protein from Arabidopsis thaliana 5.5e-06
MGG_17224
Uncharacterized protein
protein from Magnaporthe oryzae 70-15 0.00013
zgc:175175 gene_product from Danio rerio 0.00057
SSUH2
Protein SSUH2 homolog
protein from Homo sapiens 0.00070
zgc:136895 gene_product from Danio rerio 0.00079

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034351
        (97 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2169243 - symbol:AT5G43260 species:3702 "Arabi...   424  8.7e-40   1
TAIR|locus:2097164 - symbol:AT3G44020 "AT3G44020" species...   105  5.5e-06   1
UNIPROTKB|G4N8Z4 - symbol:MGG_17224 "Uncharacterized prot...    92  0.00013   1
ZFIN|ZDB-GENE-080516-4 - symbol:zgc:175175 "zgc:175175" s...    90  0.00057   1
UNIPROTKB|Q9Y2M2 - symbol:SSUH2 "Protein SSUH2 homolog" s...    93  0.00070   1
ZFIN|ZDB-GENE-060421-4694 - symbol:zgc:136895 "zgc:136895...    93  0.00079   1


>TAIR|locus:2169243 [details] [associations]
            symbol:AT5G43260 species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=ISM] InterPro:IPR001305
            EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.10.230.10
            EMBL:AY034987 EMBL:AY142606 IPI:IPI00527801 RefSeq:NP_568623.1
            UniGene:At.9492 ProteinModelPortal:Q94CB5 SMR:Q94CB5
            EnsemblPlants:AT5G43260.1 GeneID:834344 KEGG:ath:AT5G43260
            TAIR:At5g43260 eggNOG:NOG327509 HOGENOM:HOG000029502
            InParanoid:Q94CB5 OMA:MDQKPMA PhylomeDB:Q94CB5
            ProtClustDB:CLSN2689920 ArrayExpress:Q94CB5 Genevestigator:Q94CB5
            Uniprot:Q94CB5
        Length = 97

 Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
 Identities = 72/96 (75%), Positives = 84/96 (87%)

Query:     1 MGPFVLTQVATGLSVLAGAALVKSVMDQKPMAGPFDRCPSCNGTGRVTCMCTRWSDGDVG 60
             M P V+TQ+ATG+SVLAGA  +KSVMDQKPMAG F RCP+CNGTGRVTC C+RWSDGDVG
Sbjct:     1 MSPIVITQLATGISVLAGAVFIKSVMDQKPMAGQFPRCPTCNGTGRVTCFCSRWSDGDVG 60

Query:    61 CRTCAGSGRMACRSCGGTGTGRPLPVQLSVRRPNRP 96
             CR C+GSGR AC +CGG+GTGRPLP Q++V+ PNRP
Sbjct:    61 CRRCSGSGRAACSNCGGSGTGRPLPAQITVQPPNRP 96


>TAIR|locus:2097164 [details] [associations]
            symbol:AT3G44020 "AT3G44020" species:3702 "Arabidopsis
            thaliana" [GO:0009543 "chloroplast thylakoid lumen" evidence=ISS]
            EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL163975 EMBL:AK118643
            IPI:IPI00532713 PIR:T48956 RefSeq:NP_189988.1 UniGene:At.36205
            ProteinModelPortal:Q9LXV9 SMR:Q9LXV9 EnsemblPlants:AT3G44020.1
            GeneID:823519 KEGG:ath:AT3G44020 TAIR:At3g44020 eggNOG:NOG276110
            HOGENOM:HOG000238632 InParanoid:Q9LXV9 OMA:MKVESGM PhylomeDB:Q9LXV9
            ProtClustDB:CLSN2914780 Genevestigator:Q9LXV9 Uniprot:Q9LXV9
        Length = 159

 Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
 Identities = 29/86 (33%), Positives = 41/86 (47%)

Query:     2 GPFVLTQV-ATGLSVLAGAALVKSVMDQKPMAGPFDRCPSCNGTGRVTCMCTRWS--DGD 58
             G F+ TQ     +S++   AL    +  K    P +RC    GT  V C+  +     G 
Sbjct:    75 GGFIDTQTFIVTISLVVAIAL-SLFLGFKGDPVPCERCGGNGGTKCVFCLEGKMKVESGM 133

Query:    59 VGCRTCAGSGRMACRSCGGTGTGRPL 84
             V C+ C GSG + C+ CGG+G  R L
Sbjct:   134 VDCKVCKGSGLIFCKKCGGSGYSRRL 159


>UNIPROTKB|G4N8Z4 [details] [associations]
            symbol:MGG_17224 "Uncharacterized protein" species:242507
            "Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] EMBL:CM001234
            RefSeq:XP_003717408.1 EnsemblFungi:MGG_17224T0 GeneID:12986522
            KEGG:mgr:MGG_17224 Uniprot:G4N8Z4
        Length = 59

 Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
 Identities = 18/49 (36%), Positives = 27/49 (55%)

Query:    36 DRCPSCNGTGRVTCMCTRWSDGDV----G-CRTCAGSGRMACRSCGGTG 79
             + C SC+GTG+ TC+    +  D+    G C  C   G++ C +CGG G
Sbjct:     7 ETCSSCSGTGQCTCLRCGGTGSDIFAECGICPHCYARGQVPCSACGGKG 55


>ZFIN|ZDB-GENE-080516-4 [details] [associations]
            symbol:zgc:175175 "zgc:175175" species:7955 "Danio
            rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] ZFIN:ZDB-GENE-080516-4 GeneTree:ENSGT00440000038003
            EMBL:BX936290 IPI:IPI00896275 Ensembl:ENSDART00000109841
            Bgee:F1Q936 Uniprot:F1Q936
        Length = 211

 Score = 90 (36.7 bits), Expect = 0.00057, P = 0.00057
 Identities = 27/70 (38%), Positives = 31/70 (44%)

Query:    30 PMAGPFDRCPSCNGTGRVTCM-CTRWSDGDVGCRTCAGSG------RMACRSCGGTGTGR 82
             P       C SC+  GR  C+ C R   G + C  C G G      R  C  CGGTG  R
Sbjct:   143 PHTSSVQDCSSCSTLGRTMCLSCGR--TGRILCGFCGGMGWTNYGQRQFCGVCGGTGRQR 200

Query:    83 PLPVQLSVRR 92
                +QLSV R
Sbjct:   201 F--IQLSVFR 208


>UNIPROTKB|Q9Y2M2 [details] [associations]
            symbol:SSUH2 "Protein SSUH2 homolog" species:9606 "Homo
            sapiens" [GO:0005737 "cytoplasm" evidence=IDA] GO:GO:0005737
            EMBL:CH471055 HSSP:P08622 EMBL:AB024705 EMBL:AK093066 EMBL:AC034187
            EMBL:BC052614 IPI:IPI00006376 PIR:T44500 RefSeq:NP_001243678.1
            RefSeq:NP_057015.1 UniGene:Hs.740735 ProteinModelPortal:Q9Y2M2
            IntAct:Q9Y2M2 PhosphoSite:Q9Y2M2 DMDM:74721317 PRIDE:Q9Y2M2
            Ensembl:ENST00000317371 Ensembl:ENST00000341795 GeneID:51066
            KEGG:hsa:51066 UCSC:uc003bqt.3 CTD:51066 GeneCards:GC03M008661
            HGNC:HGNC:24809 HPA:HPA049777 neXtProt:NX_Q9Y2M2
            PharmGKB:PA142672393 eggNOG:NOG124856 HOGENOM:HOG000111363
            HOVERGEN:HBG081008 InParanoid:Q9Y2M2 OMA:YGTDHRV OrthoDB:EOG48KRBG
            ChiTaRS:C3orf32 GenomeRNAi:51066 NextBio:53663 ArrayExpress:Q9Y2M2
            Bgee:Q9Y2M2 CleanEx:HS_C3orf32 Genevestigator:Q9Y2M2
            GermOnline:ENSG00000125046 Uniprot:Q9Y2M2
        Length = 353

 Score = 93 (37.8 bits), Expect = 0.00070, P = 0.00070
 Identities = 19/47 (40%), Positives = 24/47 (51%)

Query:    37 RCPSCNGTGRVTC-MCT---RWSDGDVGCRTCAGSGRMACRSCGGTG 79
             +C  C+G G V C  C    R +     C+ CAGSGR  C +C G G
Sbjct:   165 KCSGCHGAGTVRCPSCCGAKRKAKQSRRCQLCAGSGRRRCSTCSGRG 211


>ZFIN|ZDB-GENE-060421-4694 [details] [associations]
            symbol:zgc:136895 "zgc:136895" species:7955 "Danio
            rerio" [GO:0051082 "unfolded protein binding" evidence=IEA]
            [GO:0031072 "heat shock protein binding" evidence=IEA] [GO:0005575
            "cellular_component" evidence=ND] InterPro:IPR001305
            ZFIN:ZDB-GENE-060421-4694 Gene3D:2.10.230.10 HOVERGEN:HBG081008
            EMBL:BC115317 IPI:IPI00650985 RefSeq:NP_001035467.1
            UniGene:Dr.78476 ProteinModelPortal:Q1RLR7 GeneID:797699
            KEGG:dre:797699 InParanoid:Q1RLR7 NextBio:20933120 Uniprot:Q1RLR7
        Length = 382

 Score = 93 (37.8 bits), Expect = 0.00079, P = 0.00079
 Identities = 20/48 (41%), Positives = 25/48 (52%)

Query:    38 CPSCNGTGRVTC-MC--TRW--SDGDVGCRTCAGSGRMACRSCGGTGT 80
             C  C  +GR  C  C  T W  S     C +C+GSG + C SCGG G+
Sbjct:   195 CSKCVNSGRTRCGHCSGTGWRSSPERQRCGSCSGSGMIRCHSCGGVGS 242


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.137   0.458    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       97        97   0.00091  102 3  11 22  0.36    30
                                                     29  0.44    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  528 (56 KB)
  Total size of DFA:  114 KB (2076 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.49u 0.07s 10.56t   Elapsed:  00:00:11
  Total cpu time:  10.49u 0.07s 10.56t   Elapsed:  00:00:12
  Start:  Fri May 10 22:01:11 2013   End:  Fri May 10 22:01:23 2013

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