BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034351
(97 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9HJ83|DNAJ_THEAC Chaperone protein DnaJ OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=dnaJ PE=3 SV=1
Length = 365
Score = 38.1 bits (87), Expect = 0.018, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 22/62 (35%)
Query: 33 GPFDRCPSCNGTG-----------RVTCMCTRWSDGDVGCRTCAGSGRM---ACRSCGGT 78
G CP+CNGTG R+ + T C+TC G GR+ C C GT
Sbjct: 163 GKLITCPTCNGTGQQRIVRGQGFFRMVTVTT--------CQTCGGRGRIPEEKCPRCNGT 214
Query: 79 GT 80
GT
Sbjct: 215 GT 216
>sp|Q8TQR1|DNAJ_METAC Chaperone protein DnaJ OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=dnaJ PE=3 SV=1
Length = 382
Score = 37.7 bits (86), Expect = 0.021, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 30/62 (48%), Gaps = 11/62 (17%)
Query: 29 KPMAGPFDRCPSCNGTGRVTCMCTRWSDG-----DVGCRTCAGSGRM---ACRSCGGTGT 80
KP P RCP+C GTG+V TR + G C TC G G++ C CGG G
Sbjct: 153 KPGTSP-KRCPTCGGTGQVR--TTRSTLGMQFISTTTCSTCHGRGQIIESPCPVCGGAGR 209
Query: 81 GR 82
R
Sbjct: 210 VR 211
>sp|Q9WZV3|DNAJ_THEMA Chaperone protein DnaJ OS=Thermotoga maritima (strain ATCC 43589 /
MSB8 / DSM 3109 / JCM 10099) GN=dnaJ PE=3 SV=1
Length = 369
Score = 37.4 bits (85), Expect = 0.029, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 29 KPMAGPFDRCPSCNGTGRVTCMCTRWSD---GDVGCRTCAGSGRMA---CRSCGGTG 79
+P AG D CPSC GTGR+ + + C C G+G++ C CGG+G
Sbjct: 165 EPNAGYMD-CPSCGGTGRIREERRSFFGYFVSERTCERCGGTGKIPREYCHECGGSG 220
Score = 33.9 bits (76), Expect = 0.33, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 21/60 (35%)
Query: 35 FDRCPSCNGTGRVTCMCTRWSDGDVGCRTCAGSGRM---------------ACRSCGGTG 79
++ CP C GTG + G + C +C G+GR+ C CGGTG
Sbjct: 153 YETCPRCGGTG------VEPNAGYMDCPSCGGTGRIREERRSFFGYFVSERTCERCGGTG 206
>sp|A6LJ63|DNAJ_THEM4 Chaperone protein DnaJ OS=Thermosipho melanesiensis (strain BI429 /
DSM 12029) GN=dnaJ PE=3 SV=1
Length = 373
Score = 37.0 bits (84), Expect = 0.038, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 16/56 (28%)
Query: 38 CPSCNGTGRVT--------CMCTRWSDGDVGCRTCAGSGRM---ACRSCGGTGTGR 82
CP C+GTG V + +++ C C G+G++ +CR CGGTG R
Sbjct: 174 CPKCHGTGTVREERRTFLGVIVNQYT-----CNQCGGTGKIPGESCRVCGGTGRIR 224
>sp|Q38813|DNAJ1_ARATH Chaperone protein dnaJ 1, mitochondrial OS=Arabidopsis thaliana
GN=ATJ1 PE=2 SV=2
Length = 408
Score = 36.6 bits (83), Expect = 0.043, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 8/53 (15%)
Query: 30 PMAGPFDRCPSCNGTGRVTCMCTRWSDGDVGCRTCAGSGRMA---CRSCGGTG 79
P CP+C G GRVT C+TC G+G + C SC G+G
Sbjct: 195 PSDAAMSICPTCRGVGRVTI-----PPFTASCQTCKGTGHIIKEYCMSCRGSG 242
>sp|Q3AF07|DNAJ_CARHZ Chaperone protein DnaJ OS=Carboxydothermus hydrogenoformans (strain
Z-2901 / DSM 6008) GN=dnaJ PE=3 SV=1
Length = 381
Score = 36.2 bits (82), Expect = 0.056, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 8/56 (14%)
Query: 34 PFDRCPSCNGTGR----VTCMCTRWSDGDVGCRTCAGSGRMA---CRSCGGTGTGR 82
P CP+C G G+ V + R V C TC G G++ CR CGG+G R
Sbjct: 165 PIITCPTCQGRGQIHQEVKTLFGRMVRSQV-CSTCRGEGKIPKTPCRECGGSGLVR 219
>sp|B1LCI2|DNAJ_THESQ Chaperone protein DnaJ OS=Thermotoga sp. (strain RQ2) GN=dnaJ PE=3
SV=1
Length = 369
Score = 36.2 bits (82), Expect = 0.067, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 29 KPMAGPFDRCPSCNGTGRVTCMCTRWSD---GDVGCRTCAGSGRMA---CRSCGGTG 79
+P AG + CPSC GTGR+ + + C C G+G++ C CGG+G
Sbjct: 165 EPNAG-YINCPSCGGTGRIREERRSFFGYFVSERTCERCGGTGKIPREYCHECGGSG 220
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 21/60 (35%)
Query: 35 FDRCPSCNGTGRVTCMCTRWSDGDVGCRTCAGSGRM---------------ACRSCGGTG 79
++ CP C GTG + G + C +C G+GR+ C CGGTG
Sbjct: 153 YETCPRCGGTG------VEPNAGYINCPSCGGTGRIREERRSFFGYFVSERTCERCGGTG 206
>sp|Q5FSL4|DNAJ_GLUOX Chaperone protein DnaJ OS=Gluconobacter oxydans (strain 621H)
GN=dnaJ PE=3 SV=1
Length = 380
Score = 35.8 bits (81), Expect = 0.076, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 13/58 (22%)
Query: 30 PMAGPFDRCPSCNGTGRVTCMCTRWSDG----DVGCRTCAGSGRMA---CRSCGGTGT 80
P AG CP+C+G G+V R G + C TC GSGR C+ C GTGT
Sbjct: 160 PKAGS-STCPTCHGAGKV-----RAQQGFFLVERPCPTCHGSGRTVANPCKVCHGTGT 211
>sp|Q73Q15|DNAJ_TREDE Chaperone protein DnaJ OS=Treponema denticola (strain ATCC 35405 /
CIP 103919 / DSM 14222) GN=dnaJ PE=3 SV=2
Length = 379
Score = 35.8 bits (81), Expect = 0.087, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Query: 38 CPSCNGTGRVTCMCTRWSDGDVGCRTCAGSGRM---ACRSCGGTGTGR 82
CP C GTG+V T + C TC G G + C+ CGG G R
Sbjct: 177 CPDCKGTGQVR-QSTGFFSISRPCPTCGGEGSIIEKPCKKCGGNGLER 223
>sp|A5IIT4|DNAJ_THEP1 Chaperone protein DnaJ OS=Thermotoga petrophila (strain RKU-1 /
ATCC BAA-488 / DSM 13995) GN=dnaJ PE=3 SV=1
Length = 369
Score = 35.8 bits (81), Expect = 0.087, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 29 KPMAGPFDRCPSCNGTGRVTCMCTRWSD---GDVGCRTCAGSGRMA---CRSCGGTG 79
+P AG + CPSC GTGR+ + + C C G+G++ C CGG+G
Sbjct: 165 EPNAG-YINCPSCGGTGRIREERRSFFGYFVSERTCERCGGTGKIPREYCHECGGSG 220
Score = 34.7 bits (78), Expect = 0.18, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 21/60 (35%)
Query: 35 FDRCPSCNGTGRVTCMCTRWSDGDVGCRTCAGSGRM---------------ACRSCGGTG 79
++ CP C GTG + G + C +C G+GR+ C CGGTG
Sbjct: 153 YETCPRCGGTG------VEPNAGYINCPSCGGTGRIREERRSFFGYFVSERTCERCGGTG 206
>sp|Q97BG9|DNAJ_THEVO Chaperone protein DnaJ OS=Thermoplasma volcanium (strain ATCC 51530
/ DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=dnaJ PE=3
SV=1
Length = 365
Score = 35.4 bits (80), Expect = 0.093, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 22/62 (35%)
Query: 33 GPFDRCPSCNGTG-----------RVTCMCTRWSDGDVGCRTCAGSGRM---ACRSCGGT 78
G CP+C+GTG R+ + T C TC G GR+ C C GT
Sbjct: 163 GKLITCPTCHGTGQQRVVRGQGFFRMVTVTT--------CNTCGGKGRIPEEKCPRCNGT 214
Query: 79 GT 80
GT
Sbjct: 215 GT 216
>sp|B9MJZ0|DNAJ_CALBD Chaperone protein DnaJ OS=Caldicellulosiruptor bescii (strain ATCC
BAA-1888 / DSM 6725 / Z-1320) GN=dnaJ PE=3 SV=1
Length = 388
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Query: 29 KPMAGPFDRCPSCNGTGRVTC-MCTRWSDGDV--GCRTCAGSGRM---ACRSCGGTGTGR 82
KP + P RC C GTG++ T + + C C G+G + CR CGGTG R
Sbjct: 169 KPGSAPV-RCQKCGGTGQIRSRQATFFGEFTTIKTCDACGGTGTIITDPCRECGGTGNVR 227
>sp|A4XKA5|DNAJ_CALS8 Chaperone protein DnaJ OS=Caldicellulosiruptor saccharolyticus
(strain ATCC 43494 / DSM 8903) GN=dnaJ PE=3 SV=1
Length = 387
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Query: 29 KPMAGPFDRCPSCNGTGRVTC-MCTRWSDGDV--GCRTCAGSGRM---ACRSCGGTGTGR 82
+P A P RC C GTG++ T + + C C G G + CR CGGTGT R
Sbjct: 168 RPGATPV-RCQKCGGTGQIRSRQATFFGEFTTIKTCDACGGVGTIITDPCRECGGTGTVR 226
>sp|Q4QJW5|DNAJ_HAEI8 Chaperone protein DnaJ OS=Haemophilus influenzae (strain 86-028NP)
GN=dnaJ PE=3 SV=1
Length = 381
Score = 35.0 bits (79), Expect = 0.15, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 36 DRCPSCNGTGRVTCMCTRWSDGDVGCRTCAGSGR---MACRSCGGTG 79
+ CP C+G+GR+ + + C TC GSG+ CRSC G G
Sbjct: 161 ETCPHCHGSGRIRRQQGFFVSESI-CPTCHGSGKKIEKPCRSCHGEG 206
>sp|B4S9D0|DNAJ_PROA2 Chaperone protein DnaJ OS=Prosthecochloris aestuarii (strain DSM
271 / SK 413) GN=dnaJ PE=3 SV=1
Length = 395
Score = 34.3 bits (77), Expect = 0.21, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 8/54 (14%)
Query: 33 GPFDRCPSCNGTGRVTCMCTRWSDGD----VGCRTCAGSGRMA---CRSCGGTG 79
G + CP+C GTG V ++ G C TC G GR+ C +C G G
Sbjct: 176 GELETCPTCQGTGEVR-QASKTMFGQFVNIAACPTCGGEGRVVKERCTACHGEG 228
>sp|Q2S030|DNAJ_SALRD Chaperone protein DnaJ OS=Salinibacter ruber (strain DSM 13855 /
M31) GN=dnaJ PE=3 SV=1
Length = 388
Score = 34.3 bits (77), Expect = 0.21, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 8/52 (15%)
Query: 35 FDRCPSCNGTGRVTCMCTRWSDGDV----GCRTCAGSGRMA---CRSCGGTG 79
F CP C+GTG + +R G V C C G GR+ C CGG G
Sbjct: 170 FSMCPKCDGTGEIR-QVSRSVFGQVVNVQPCPRCEGEGRIIDNLCDDCGGEG 220
>sp|A8EUC7|DNAJ_ARCB4 Chaperone protein DnaJ OS=Arcobacter butzleri (strain RM4018)
GN=dnaJ PE=3 SV=1
Length = 372
Score = 34.3 bits (77), Expect = 0.22, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 33 GPFDRCPSCNGTGRVTCMCTRWSDGDVGCRTCAGSGRM---ACRSCGGTG 79
G CP+C G G+V + C C G+G+ +C+SC GTG
Sbjct: 158 GKLSTCPTCKGQGQVHSRQGFMTFAQT-CPRCGGTGQATTDSCKSCKGTG 206
>sp|Q9UXR9|DNAJ_METTE Chaperone protein DnaJ OS=Methanosarcina thermophila GN=dnaJ PE=3
SV=1
Length = 387
Score = 34.3 bits (77), Expect = 0.23, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 11/62 (17%)
Query: 29 KPMAGPFDRCPSCNGTGRVTCMCTRWSDG-----DVGCRTCAGSGRM---ACRSCGGTGT 80
+P P RCP+C GTG++ TR G C TC G G++ C C GTG
Sbjct: 152 RPGTSP-KRCPTCGGTGQIR--TTRTGLGMQFVSTTTCSTCRGKGQVIESPCPVCSGTGR 208
Query: 81 GR 82
R
Sbjct: 209 VR 210
>sp|Q6L0S6|DNAJ_PICTO Chaperone protein DnaJ OS=Picrophilus torridus (strain ATCC 700027
/ DSM 9790 / JCM 10055 / NBRC 100828) GN=dnaJ PE=3 SV=1
Length = 357
Score = 34.3 bits (77), Expect = 0.24, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 16/54 (29%)
Query: 38 CPSCNGTGRVTCMCTRWSDGD--------VGCRTCAGSGRM---ACRSCGGTGT 80
CP+C+G+G+ R + G CRTC G G++ C C GTGT
Sbjct: 161 CPTCHGSGQ-----ERITRGQGFFRMVTVTECRTCHGRGKIPQKPCTVCHGTGT 209
>sp|Q5P1H7|DNAJ2_AROAE Chaperone protein DnaJ 2 OS=Aromatoleum aromaticum (strain EbN1)
GN=dnaJ2 PE=3 SV=1
Length = 376
Score = 34.3 bits (77), Expect = 0.25, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Query: 29 KPMAGPFDRCPSCNGTGRVTCMCTRWSDGDVGCRTCAGSGRM---ACRSCGGTG 79
KP P CP+C G G+V +S C C G+GR+ CR CGG G
Sbjct: 157 KPGTQP-KPCPTCGGAGQVRIQQGFFSIQQT-CPKCHGTGRIIPDPCRDCGGAG 208
>sp|A5UF67|DNAJ_HAEIG Chaperone protein DnaJ OS=Haemophilus influenzae (strain PittGG)
GN=dnaJ PE=3 SV=1
Length = 382
Score = 34.3 bits (77), Expect = 0.25, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 36 DRCPSCNGTGRVTCMCTRWSDGDVGCRTCAGSGR---MACRSCGGTG 79
+ CP C+G+GR+ + + C +C GSG+ CRSC G G
Sbjct: 162 ETCPHCHGSGRIRRQQGFFVSESI-CPSCHGSGKKIEKPCRSCHGEG 207
>sp|P43735|DNAJ_HAEIN Chaperone protein DnaJ OS=Haemophilus influenzae (strain ATCC 51907
/ DSM 11121 / KW20 / Rd) GN=dnaJ PE=3 SV=1
Length = 382
Score = 34.3 bits (77), Expect = 0.26, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 36 DRCPSCNGTGRVTCMCTRWSDGDVGCRTCAGSGR---MACRSCGGTG 79
+ CP C+G+GR+ + + C TC GSG+ CR+C G G
Sbjct: 162 ETCPHCHGSGRIRRQQGFFVSESI-CPTCHGSGKKIEKPCRNCHGEG 207
>sp|P0CW06|DNAJ_METMZ Chaperone protein DnaJ OS=Methanosarcina mazei GN=dnaJ PE=3 SV=1
Length = 389
Score = 33.9 bits (76), Expect = 0.27, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 11/62 (17%)
Query: 29 KPMAGPFDRCPSCNGTGRVTCMCTRWSDG-----DVGCRTCAGSGRMA---CRSCGGTGT 80
KP P RCP+C GTG+V TR + G C C G G++ C +C G G
Sbjct: 153 KPGTSP-KRCPNCGGTGQVR--TTRSTLGMQFVSTTTCSACHGRGQVVESPCPTCSGAGR 209
Query: 81 GR 82
R
Sbjct: 210 VR 211
>sp|P0CW07|DNAJ_METMA Chaperone protein DnaJ OS=Methanosarcina mazei (strain ATCC BAA-159
/ DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=dnaJ
PE=3 SV=1
Length = 389
Score = 33.9 bits (76), Expect = 0.27, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 11/62 (17%)
Query: 29 KPMAGPFDRCPSCNGTGRVTCMCTRWSDG-----DVGCRTCAGSGRMA---CRSCGGTGT 80
KP P RCP+C GTG+V TR + G C C G G++ C +C G G
Sbjct: 153 KPGTSP-KRCPNCGGTGQVR--TTRSTLGMQFVSTTTCSACHGRGQVVESPCPTCSGAGR 209
Query: 81 GR 82
R
Sbjct: 210 VR 211
>sp|P61441|DNAJ_LEPIN Chaperone protein DnaJ OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar Lai (strain 56601) GN=dnaJ
PE=3 SV=1
Length = 372
Score = 33.9 bits (76), Expect = 0.29, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 38 CPSCNGTGRVTCMCTRWSDGDVGCRTCAGSGRM---ACRSCGGTG 79
CP C G+G++ +S C TC G G + CRSCGG G
Sbjct: 170 CPDCGGSGQIRRTQGFFSVATT-CPTCRGKGTIISNPCRSCGGQG 213
>sp|P61440|DNAJ_LEPIC Chaperone protein DnaJ OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar copenhageni (strain Fiocruz
L1-130) GN=dnaJ PE=3 SV=1
Length = 372
Score = 33.9 bits (76), Expect = 0.29, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 38 CPSCNGTGRVTCMCTRWSDGDVGCRTCAGSGRM---ACRSCGGTG 79
CP C G+G++ +S C TC G G + CRSCGG G
Sbjct: 170 CPDCGGSGQIRRTQGFFSVATT-CPTCRGKGTIISNPCRSCGGQG 213
>sp|B1XQF6|DNAJ_SYNP2 Chaperone protein DnaJ OS=Synechococcus sp. (strain ATCC 27264 /
PCC 7002 / PR-6) GN=dnaJ PE=3 SV=1
Length = 378
Score = 33.9 bits (76), Expect = 0.29, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 8/51 (15%)
Query: 36 DRCPSCNGTGRVTCMCTRWSDGDVG----CRTCAGSGRM---ACRSCGGTG 79
+ C +CNGTG+V TR G C TC G G++ C SCGG G
Sbjct: 164 NTCGTCNGTGQVR-RATRTPFGSFAQVSVCPTCNGEGQVIAEKCESCGGAG 213
>sp|Q8RH03|DNAJ_FUSNN Chaperone protein DnaJ OS=Fusobacterium nucleatum subsp. nucleatum
(strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131)
GN=dnaJ PE=3 SV=1
Length = 392
Score = 33.9 bits (76), Expect = 0.33, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 10/53 (18%)
Query: 38 CPSCNGTGRV-----TCMCTRWSDGDVGCRTCAGSGRM---ACRSCGGTGTGR 82
CP+CNG G + T + S C C G+G++ C+ C GTGT +
Sbjct: 177 CPTCNGQGTIRTQQRTILGVMQSQS--VCPDCHGTGKVPEKKCKHCHGTGTAK 227
>sp|Q8TA83|DNJ10_CAEEL DnaJ homolog dnj-10 OS=Caenorhabditis elegans GN=dnj-10 PE=4 SV=1
Length = 456
Score = 33.9 bits (76), Expect = 0.34, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 9/48 (18%)
Query: 38 CPSCNGTGRVTCMCTRWSDG---DVGCRTCAGSG---RMACRSCGGTG 79
CP CNGTG V+ R G C C GSG + C+ C G G
Sbjct: 208 CPYCNGTGAVS---QRLQGGFFYQTTCNRCRGSGHYNKNPCQECEGEG 252
>sp|A4IR30|DNAJ_GEOTN Chaperone protein DnaJ OS=Geobacillus thermodenitrificans (strain
NG80-2) GN=dnaJ PE=3 SV=1
Length = 381
Score = 33.9 bits (76), Expect = 0.35, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 29 KPMAGPFDRCPSCNGTGRVTCMCTRWSDGDVGCRT---CAGSGRM---ACRSCGGTG 79
KP P CP C+G+G+VT V RT C G+GR C +CGGTG
Sbjct: 158 KPGTSP-QSCPHCHGSGQVTSEQATPFGRIVNRRTCPVCGGTGRHIPEKCPTCGGTG 213
>sp|Q182E7|DNAJ_CLOD6 Chaperone protein DnaJ OS=Clostridium difficile (strain 630)
GN=dnaJ PE=3 SV=1
Length = 384
Score = 33.9 bits (76), Expect = 0.35, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 8/52 (15%)
Query: 38 CPSCNGTGRVTCMCTRWSDGDVG----CRTCAGSGRM---ACRSCGGTGTGR 82
C +CNGTG+V + R G++ C C G+G + C C GTG R
Sbjct: 171 CSTCNGTGQVRTV-QRTPFGNIASSRPCSACNGTGEVIESPCSKCHGTGNTR 221
>sp|Q70WY6|DNAJ_FUSNP Chaperone protein DnaJ OS=Fusobacterium nucleatum subsp.
polymorphum GN=dnaJ PE=3 SV=1
Length = 394
Score = 33.5 bits (75), Expect = 0.35, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 10/53 (18%)
Query: 38 CPSCNGTGRV-----TCMCTRWSDGDVGCRTCAGSGRM---ACRSCGGTGTGR 82
CP+CNG G + T + S C C G+G++ C+ C GTGT +
Sbjct: 179 CPTCNGQGTIKTQQRTILGVMQSQS--VCPDCHGTGKVPEKKCKHCRGTGTAK 229
>sp|B9KAB9|DNAJ_THENN Chaperone protein DnaJ OS=Thermotoga neapolitana (strain ATCC 49049
/ DSM 4359 / NS-E) GN=dnaJ PE=3 SV=1
Length = 370
Score = 33.5 bits (75), Expect = 0.37, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 23/60 (38%), Gaps = 21/60 (35%)
Query: 35 FDRCPSCNGTGRVTCMCTRWSDGDVGCRTCAGSGRM---------------ACRSCGGTG 79
++ CP C GTG G + C C G+GR+ C CGGTG
Sbjct: 154 YETCPRCGGTG------VEPDSGYISCPRCGGTGRIREEKRSFFGYFVSERTCDECGGTG 207
Score = 33.1 bits (74), Expect = 0.46, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Query: 38 CPSCNGTGRVTCMCTRWSDGDVGCRT---CAGSGRMA---CRSCGGTG 79
CP C GTGR+ + V RT C G+GR+ C CGG+G
Sbjct: 174 CPRCGGTGRIREEKRSFFGYFVSERTCDECGGTGRVPQELCHECGGSG 221
>sp|Q65U54|DNAJ_MANSM Chaperone protein DnaJ OS=Mannheimia succiniciproducens (strain
MBEL55E) GN=dnaJ PE=3 SV=2
Length = 376
Score = 33.5 bits (75), Expect = 0.39, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 12/51 (23%)
Query: 36 DRCPSCNGTGRVTCMCTRWSDG----DVGCRTCAGSGR---MACRSCGGTG 79
+ CP+C+G GRV R G + C TC GSG+ C+ C G G
Sbjct: 161 ETCPTCHGHGRV-----RRQQGFFMTETTCPTCQGSGKKIEKPCKHCHGDG 206
>sp|Q8A8C3|DNAJ_BACTN Chaperone protein DnaJ OS=Bacteroides thetaiotaomicron (strain ATCC
29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) GN=dnaJ
PE=3 SV=1
Length = 396
Score = 33.5 bits (75), Expect = 0.40, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 16/58 (27%)
Query: 33 GPFDRCPSCNGTGRVT--------CMCTRWSDGDVGCRTCAGSGRM---ACRSCGGTG 79
G + CP+C G+G V M TR + C TC G G++ C+ CGG G
Sbjct: 179 GGSETCPTCKGSGSVIRNQQTILGTMQTRTT-----CPTCNGEGKIIKNKCKECGGDG 231
>sp|Q58598|Y1198_METJA Uncharacterized protein MJ1198 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 /
NBRC 100440) GN=MJ1198 PE=1 SV=1
Length = 761
Score = 33.5 bits (75), Expect = 0.44, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 17/62 (27%)
Query: 35 FDRCPSCNGTG------------RVTCMCTRWSD-GDVGCRTCAGSGRM----ACRSCGG 77
+ CP C GTG RV+ T D G++ C C G+G++ C CGG
Sbjct: 18 YKTCPVCEGTGFIDEFSPKQHMKRVSKRATYDLDYGEIPCPKCKGTGKVPVYAKCDFCGG 77
Query: 78 TG 79
+G
Sbjct: 78 SG 79
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 9/41 (21%)
Query: 38 CPSCNGTGRVTCMCTRWSDGDVGCRTCAGSGRMA-CRSCGG 77
CP C GTG+V C C GSG++ C CG
Sbjct: 57 CPKCKGTGKVPVYAK--------CDFCGGSGKVVKCDRCGA 89
>sp|Q74H58|DNAJ_GEOSL Chaperone protein DnaJ OS=Geobacter sulfurreducens (strain ATCC
51573 / DSM 12127 / PCA) GN=dnaJ PE=3 SV=1
Length = 373
Score = 33.1 bits (74), Expect = 0.47, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 38 CPSCNGTGRVTCMCTRWSDGDVGCRTCAGSGRMA---CRSCGGTGTGRPLPVQLSVRRP 93
CP+C G G+V +S C C G GR+ C SC G+G R LSV+ P
Sbjct: 166 CPTCRGAGQVRFQQGFFSVSKT-CNHCNGEGRVVENPCTSCRGSGMIRDTKT-LSVKVP 222
>sp|Q75WD2|DNAJ_ACEP3 Chaperone protein DnaJ OS=Acetobacter pasteurianus (strain NBRC
3283 / LMG 1513 / CCTM 1153) GN=dnaJ PE=3 SV=2
Length = 380
Score = 33.1 bits (74), Expect = 0.49, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 12/50 (24%)
Query: 38 CPSCNGTGRVTCMCTRWSDG----DVGCRTCAGSGRMA---CRSCGGTGT 80
CPSC+G G+V R G + C TC G+G++ C+ C G GT
Sbjct: 167 CPSCHGAGKV-----RAQQGFFVVERPCPTCHGAGKVVKNPCKVCHGEGT 211
>sp|Q5KWZ8|DNAJ_GEOKA Chaperone protein DnaJ OS=Geobacillus kaustophilus (strain HTA426)
GN=dnaJ PE=3 SV=1
Length = 382
Score = 33.1 bits (74), Expect = 0.50, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 29 KPMAGPFDRCPSCNGTGRVTCMCTRWSDGDVGCRT---CAGSGRM---ACRSCGGTG 79
KP P CP C+G+G+VT V RT C G+GR C +CGGTG
Sbjct: 159 KPGTSP-TSCPHCHGSGQVTSEQATPFGRIVNRRTCPVCGGTGRYIPEKCPTCGGTG 214
>sp|Q8KCD8|DNAJ_CHLTE Chaperone protein DnaJ OS=Chlorobium tepidum (strain ATCC 49652 /
DSM 12025 / TLS) GN=dnaJ PE=3 SV=1
Length = 403
Score = 33.1 bits (74), Expect = 0.58, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 8/55 (14%)
Query: 32 AGPFDRCPSCNGTGRV----TCMCTRWSDGDVGCRTCAGSGRMA---CRSCGGTG 79
+G + CP+C+G+G V M ++ + V C TC G GR+ C SC G G
Sbjct: 182 SGKTEICPTCHGSGEVRQATKTMFGQFMNISV-CPTCGGEGRVVKDRCPSCYGEG 235
>sp|Q8RB67|DNAJ_THETN Chaperone protein DnaJ OS=Thermoanaerobacter tengcongensis (strain
DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=dnaJ PE=3
SV=1
Length = 384
Score = 32.7 bits (73), Expect = 0.60, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Query: 29 KPMAGPFDRCPSCNGTGRVTCMCTRWSDGDVGCRTCA---GSGRM---ACRSCGGTGTGR 82
KP + P + CP C+GTG + V RTC G G++ C+ CGGTG R
Sbjct: 164 KPGSRP-ETCPVCHGTGEIRQTQNTPFGRIVNIRTCPRCHGEGKIITDPCQKCGGTGKIR 222
>sp|Q2GLU9|DNAJ_ANAPZ Chaperone protein DnaJ OS=Anaplasma phagocytophilum (strain HZ)
GN=dnaJ PE=3 SV=1
Length = 382
Score = 32.7 bits (73), Expect = 0.61, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 37 RCPSCNGTGRVTCMCTRWSDGDVGCRTCAGSGRMA---CRSCGGTGTGR 82
+C +CNG GR+ + ++ C TC+G G + C+ C G+G R
Sbjct: 168 KCGTCNGAGRIRTRKGFLTIEEL-CHTCSGEGEVVKNKCKRCAGSGRVR 215
>sp|Q2VYT0|DNAJ_MAGSA Chaperone protein DnaJ OS=Magnetospirillum magneticum (strain AMB-1
/ ATCC 700264) GN=dnaJ PE=3 SV=1
Length = 383
Score = 32.7 bits (73), Expect = 0.63, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 12/52 (23%)
Query: 38 CPSCNGTGRVTCMCTRWSDG----DVGCRTCAGSGRM---ACRSCGGTGTGR 82
C +C+G G+V R G + C TC G G++ CRSCGG+G R
Sbjct: 167 CSACHGHGKV-----RQQQGFFTIERTCPTCQGMGKIIKDPCRSCGGSGRTR 213
>sp|B8F7S3|DNAJ_HAEPS Chaperone protein DnaJ OS=Haemophilus parasuis serovar 5 (strain
SH0165) GN=dnaJ PE=3 SV=1
Length = 378
Score = 32.7 bits (73), Expect = 0.71, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 12/51 (23%)
Query: 36 DRCPSCNGTGRVTCMCTRWSDG----DVGCRTCAGSGR---MACRSCGGTG 79
+ CP C+G+GRV R G + C +C G+G+ C+SC G G
Sbjct: 163 ETCPHCHGSGRV-----RRQQGFFMTETVCPSCHGTGKKIDKPCKSCHGDG 208
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 9/33 (27%)
Query: 38 CPSCNGTGRVTCMCTRWSDGDVGCRTCAGSGRM 70
CPSC+GTG+ D C++C G GR+
Sbjct: 187 CPSCHGTGKKI---------DKPCKSCHGDGRV 210
>sp|Q0AIY0|DNAJ_NITEC Chaperone protein DnaJ OS=Nitrosomonas eutropha (strain C91)
GN=dnaJ PE=3 SV=1
Length = 369
Score = 32.7 bits (73), Expect = 0.75, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 29 KPMAGPFDRCPSCNGTGRVTCMCTRWSDGDVGCRTCAGSGRMA---CRSCGGTGTGRPLP 85
KP P CP+CNG G+V +S C C GSG++ C C G G +
Sbjct: 150 KPGTSP-KTCPTCNGHGQVRMQQGFFSIQQT-CSHCHGSGKIVSDPCTDCQGAGRVKRHK 207
Query: 86 VQLSVRRP 93
LSVR P
Sbjct: 208 T-LSVRIP 214
>sp|B9KFK6|DNAJ_CAMLR Chaperone protein DnaJ OS=Campylobacter lari (strain RM2100 / D67 /
ATCC BAA-1060) GN=dnaJ PE=3 SV=1
Length = 373
Score = 32.3 bits (72), Expect = 0.81, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Query: 33 GPFDRCPSCNGTGRVTCMCTRWSDGDVGCRTCAGSGRM---ACRSCGGTG 79
G D CP C G G+V + C C GSG++ C++C G G
Sbjct: 157 GKLDTCPHCGGKGQVGVR-QGFMTFVQSCDHCKGSGQIIKDKCKTCHGNG 205
>sp|A5EYE5|DNAJ_DICNV Chaperone protein DnaJ OS=Dichelobacter nodosus (strain VCS1703A)
GN=dnaJ PE=3 SV=1
Length = 374
Score = 32.3 bits (72), Expect = 0.87, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Query: 38 CPSCNGTGRVTCMCTRWSDGDVGCRTCAGSGRM---ACRSCGGTG 79
CP+CNG G+V +S C TC G G + C C GTG
Sbjct: 162 CPTCNGAGQVRMQQGFFSIAQ-PCPTCHGRGEIIENPCNKCQGTG 205
>sp|Q8KRC9|DNAJ_MYXXA Chaperone protein DnaJ OS=Myxococcus xanthus GN=dnaJ PE=3 SV=1
Length = 391
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 32 AGPFDRCPSCNGTGRVTCMCTRWSDGDVGCRTCAGSGRMA--CRSCGGTGTGRPLPVQLS 89
+GP C CNGTGR + + G C C G+G+ A C CGG G L +L+
Sbjct: 189 SGPVSTCNVCNGTGRARRSGSLFG-GAGACPNCHGTGKAAPPCPQCGGAGVKEEL-ARLT 246
Query: 90 VRRP 93
V+ P
Sbjct: 247 VKIP 250
>sp|Q5P9E0|DNAJ_ANAMM Chaperone protein DnaJ OS=Anaplasma marginale (strain St. Maries)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 32.3 bits (72), Expect = 0.96, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 37 RCPSCNGTGRVTCMCTRWSDGDVGCRTCAGSGRM---ACRSCGGTGTGR 82
+C +CNG G V + +V C C G G + CR CGG+G R
Sbjct: 164 KCGNCNGAGSVRTRKGFLTIEEV-CNVCNGEGEVIKNKCRRCGGSGRVR 211
>sp|B9KH92|DNAJ_ANAMF Chaperone protein DnaJ OS=Anaplasma marginale (strain Florida)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 32.3 bits (72), Expect = 0.96, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 37 RCPSCNGTGRVTCMCTRWSDGDVGCRTCAGSGRM---ACRSCGGTGTGR 82
+C +CNG G V + +V C C G G + CR CGG+G R
Sbjct: 164 KCGNCNGAGSVRTRKGFLTIEEV-CNVCNGEGEVIKNKCRRCGGSGRVR 211
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.458
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,249,733
Number of Sequences: 539616
Number of extensions: 1590262
Number of successful extensions: 5457
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 252
Number of HSP's that attempted gapping in prelim test: 5037
Number of HSP's gapped (non-prelim): 557
length of query: 97
length of database: 191,569,459
effective HSP length: 66
effective length of query: 31
effective length of database: 155,954,803
effective search space: 4834598893
effective search space used: 4834598893
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)