BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034353
(97 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SHG5|C72C1_ARATH Cytochrome P450 72C1 OS=Arabidopsis thaliana GN=CYP72C1 PE=2 SV=2
Length = 519
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 60/87 (68%)
Query: 3 LPLKSIALTIVIVTVLTWAWRVLNWVWLRPKKLEKFLRQQGLKGNSYRLLFGDLKENSIE 62
+ ++ + L ++ +L W WR +NWVWLRPK+LEK+L++QG GNSYR+L GD++E++
Sbjct: 5 ITVRKVFLIGFLILILNWVWRAVNWVWLRPKRLEKYLKKQGFSGNSYRILMGDMRESNQM 64
Query: 63 LKEAKARPLSLDDNIAIRVNPFLHKLV 89
+ A + PL LD + R+ PFLH V
Sbjct: 65 DQVAHSLPLPLDADFLPRMMPFLHHTV 91
>sp|Q05047|C72A1_CATRO Secologanin synthase OS=Catharanthus roseus GN=CYP72A1 PE=2 SV=1
Length = 524
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Query: 1 MELPLKSIALTIVIVTVLTWAWRVLNWVWLRPKKLEKFLRQQGLKGNSYRLLFGDLKENS 60
M+ K+IA TI + V+ WAWRVL+W W PK++EK LRQQG +GN YR L GD+KE+
Sbjct: 5 MDTIRKAIAATIFAL-VMAWAWRVLDWAWFTPKRIEKRLRQQGFRGNPYRFLVGDVKESG 63
Query: 61 IELKEAKARPLSLDDNIAIRVNPFLHKLVNDY 92
+EA ++P+ +++I R+ P ++ +N Y
Sbjct: 64 KMHQEALSKPMEFNNDIVPRLMPHINHTINTY 95
>sp|O48786|C734A_ARATH Cytochrome P450 734A1 OS=Arabidopsis thaliana GN=CYP734A1 PE=2
SV=1
Length = 520
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 7 SIALTIVIVTVLTWAWRVLNWVWLRPKKLEKFLRQQGLKGNSYRLLFGDLKENSIELKEA 66
S+ L++VIV + ++ +W RP+K+E+ +QG++G Y G++KE + +A
Sbjct: 17 SVILSLVIV-------KGMSLLWWRPRKIEEHFSKQGIRGPPYHFFIGNVKELVGMMLKA 69
Query: 67 KARPLSLDDNIAIRVNPFLH 86
+ P+ NI RV F H
Sbjct: 70 SSHPMPFSHNILPRVLSFYH 89
>sp|Q69XM6|C7344_ORYSJ Cytochrome P450 734A4 OS=Oryza sativa subsp. japonica GN=CYP734A4
PE=2 SV=1
Length = 538
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 23 RVLNWVWLRPKKLEKFLRQQGLKGNSYRLLFGDLKENSIELKEAKARPL--SLDDNIAIR 80
RV + VW RP++LE QG++G YR L G ++E + EA A+P+ + N R
Sbjct: 20 RVADAVWWRPRRLEAHFAGQGVRGPPYRFLVGCVREMVALMAEATAKPMPPAAPHNALPR 79
Query: 81 VNPFLHKLVNDYEP 94
V F H Y P
Sbjct: 80 VLAFYHYWRKIYGP 93
>sp|Q6Z6D6|C7342_ORYSJ Cytochrome P450 734A2 OS=Oryza sativa subsp. japonica GN=CYP734A2
PE=2 SV=1
Length = 557
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 21 AWRVLNWVWLRPKKLEKFLRQQGLKGNSYRLLFGDLKENSIELKEAKARPLS--LDDNIA 78
A R+ + +W RP++LE QG++G YR L G ++E + EA ++P+S N
Sbjct: 34 AARMADALWWRPRRLEAHFAAQGVRGPPYRFLLGSVREMVALMAEASSKPMSPPTSHNAL 93
Query: 79 IRVNPFLH 86
RV F H
Sbjct: 94 PRVLAFYH 101
>sp|Q8LIF2|C7345_ORYSJ Cytochrome P450 734A5 OS=Oryza sativa subsp. japonica GN=CYP734A5
PE=2 SV=1
Length = 537
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 28 VWLRPKKLEKFLRQQGLKGNSYRLLFGDLKENSIELKEAKARPLS--LDDNIAIRVNPFL 85
+W RP+++E+ QG++G YR G E + +A +RP+ +I RV PF
Sbjct: 39 LWWRPRRVERHFAAQGVRGPGYRFFVGSSIELVRLMVDAASRPMEPPTSHDILPRVLPFY 98
Query: 86 HKLVNDYEPL 95
H Y P+
Sbjct: 99 HHWRKLYGPM 108
>sp|B9X287|C7346_ORYSJ Cytochrome P450 734A6 OS=Oryza sativa subsp. japonica GN=CYP734A6
PE=2 SV=1
Length = 542
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 23 RVLNWVWLRPKKLEKFLRQQGLKGNSYRLLFGDLKENSIELKEAKARPLS---LDDNIAI 79
+VL +W RP+++E+ +QG+ G YR L G ++E + A A+P+ N+
Sbjct: 20 KVLEVLWWRPRRVEEHFARQGITGPRYRFLVGCVREMVALMVAASAKPMPPPYRSHNVLP 79
Query: 80 RVNPFLH 86
RV F H
Sbjct: 80 RVLAFYH 86
>sp|Q9FF18|C7351_ARATH Cytokinin hydroxylase OS=Arabidopsis thaliana GN=CYP735A1 PE=1
SV=1
Length = 518
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 5 LKSIALTIVIVTVLTWAWRVLNWVWLRPKKLEKFLRQQGLKGNSYRLLFGDLKENSIELK 64
LKS+ L I + T+L + ++ WL P++++K + QQG+ G R L G++ E S +
Sbjct: 6 LKSL-LVIFVTTILRVLYDTISCYWLTPRRIKKIMEQQGVTGPKPRPLTGNILEISAMVS 64
Query: 65 EAKARPL-SLDDNIAIRVNP 83
++ ++ S+ +I R+ P
Sbjct: 65 QSASKDCDSIHHDIVGRLLP 84
>sp|Q9ZW95|C7352_ARATH Cytokinin hydroxylase OS=Arabidopsis thaliana GN=CYP735A2 PE=1
SV=1
Length = 512
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 7 SIALTIVIVTVLTWAWRVL----NWVWLRPKKLEKFLRQQGLKGNSYRLLFGDLKENSIE 62
++ L V+V V+T RVL +L P++++KF+ +QG+ G RLL G++ + S
Sbjct: 4 TLVLKYVLVIVMTLILRVLYDSICCYFLTPRRIKKFMERQGITGPKPRLLTGNIIDISKM 63
Query: 63 LKEAKARPL-SLDDNIAIRVNP 83
L + + S+ NI R+ P
Sbjct: 64 LSHSASNDCSSIHHNIVPRLLP 85
>sp|Q43652|IP27_SOLTU Proteinase inhibitor type-2 CM7 OS=Solanum tuberosum GN=PIN2-CM7
PE=3 SV=1
Length = 154
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 42 QGLKGNSYRLLFGD-LKENSIELKEAKARPLSLDDNIAIRVNP 83
G KG +Y +FG + E +LK KA PL+ D NIA P
Sbjct: 63 SGYKGCNYYSVFGRFICEGESDLKNPKACPLNCDTNIAYSRCP 105
>sp|Q92J81|Y188_RICCN Uncharacterized protein RC0188 OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=RC0188 PE=4 SV=1
Length = 704
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 34 KLEKFLRQQGLKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHK 87
K E +L +Q +KG L + D EN+ L AK+ L+ D I +V F K
Sbjct: 578 KKENYLTEQDIKGIKKNLKYQDNIENTTNLLNAKSFKLNSKDTIYYKVGIFCEK 631
>sp|Q9CNW9|RLMKL_PASMU Ribosomal RNA large subunit methyltransferase K/L OS=Pasteurella
multocida (strain Pm70) GN=rlmL PE=3 SV=1
Length = 719
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 10/54 (18%)
Query: 33 KKLEKFLRQQGLKGNSYRLLFGDLKENSIELK--------EAKARPLSLDDNIA 78
KK+EK+ +QQG+ N+YRL DL E ++ + + A P ++D+N A
Sbjct: 418 KKIEKWAKQQGI--NAYRLYDADLPEYNLAVDRYDDHIVVQEYAAPKNIDENKA 469
>sp|Q9PC26|SYGB_XYLFA Glycine--tRNA ligase beta subunit OS=Xylella fastidiosa (strain
9a5c) GN=glyS PE=3 SV=1
Length = 722
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 6 KSIALTIVIVTVLTWAWRVLNWVWLRPKKLEKFLRQQGLKGNSYRLLFGDLKENSIELKE 65
++IA I + +L +L+ L+ + + +F QG+ G+ Y L+ G+L E ++ +++
Sbjct: 375 EAIAPQIGVDPLLARRVALLSKNDLQSRMVNEFPELQGIAGHHYALISGELPEVAMAIED 434
Query: 66 AKARPLSLDDNIA 78
A RP D IA
Sbjct: 435 AY-RPRFSGDEIA 446
>sp|Q87D45|SYGB_XYLFT Glycine--tRNA ligase beta subunit OS=Xylella fastidiosa (strain
Temecula1 / ATCC 700964) GN=glyS PE=3 SV=1
Length = 722
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 6 KSIALTIVIVTVLTWAWRVLNWVWLRPKKLEKFLRQQGLKGNSYRLLFGDLKENSIELKE 65
++IA I + +L +L+ L+ + + +F QG+ G+ Y L+ G+L E ++ +++
Sbjct: 375 EAIAPQIGVDPLLARRVALLSKNDLQSRMVNEFPELQGVAGHHYALISGELPEVAMAIED 434
Query: 66 AKARPLSLDDNIA 78
A RP D IA
Sbjct: 435 AY-RPRFSGDEIA 446
>sp|B2I4M9|SYGB_XYLF2 Glycine--tRNA ligase beta subunit OS=Xylella fastidiosa (strain
M23) GN=glyS PE=3 SV=1
Length = 722
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 6 KSIALTIVIVTVLTWAWRVLNWVWLRPKKLEKFLRQQGLKGNSYRLLFGDLKENSIELKE 65
++IA I + +L +L+ L+ + + +F QG+ G+ Y L+ G+L E ++ +++
Sbjct: 375 EAIAPQIGVDPLLARRVALLSKNDLQSRMVNEFPELQGVAGHHYALISGELPEVAMAIED 434
Query: 66 AKARPLSLDDNIA 78
A RP D IA
Sbjct: 435 AY-RPRFSGDEIA 446
>sp|B0U7B2|SYGB_XYLFM Glycine--tRNA ligase beta subunit OS=Xylella fastidiosa (strain
M12) GN=glyS PE=3 SV=1
Length = 722
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 6 KSIALTIVIVTVLTWAWRVLNWVWLRPKKLEKFLRQQGLKGNSYRLLFGDLKENSIELKE 65
++IA I + +L +L+ L+ + + +F QG+ G+ Y L+ G+L E ++ +++
Sbjct: 375 EAIAPQIGVDPLLARRVALLSKNDLQSRMVNEFPELQGVAGHHYALISGELPEVAMAIED 434
Query: 66 AKARPLSLDDNIA 78
A RP D IA
Sbjct: 435 AY-RPRFSGDEIA 446
>sp|A3MYD2|RLMKL_ACTP2 Ribosomal RNA large subunit methyltransferase K/L OS=Actinobacillus
pleuropneumoniae serotype 5b (strain L20) GN=rlmL PE=3
SV=1
Length = 712
Score = 28.9 bits (63), Expect = 9.5, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 9/48 (18%)
Query: 33 KKLEKFLRQQGLKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIR 80
KK+EK+ +QQG+ N+YRL DL E ++ + DD+I ++
Sbjct: 412 KKIEKWAKQQGI--NAYRLYDADLPEYNLAVDR-------YDDHIVVQ 450
>sp|B0BRL8|RLMKL_ACTPJ Ribosomal RNA large subunit methyltransferase K/L OS=Actinobacillus
pleuropneumoniae serotype 3 (strain JL03) GN=rlmL PE=3
SV=1
Length = 712
Score = 28.9 bits (63), Expect = 9.7, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 9/48 (18%)
Query: 33 KKLEKFLRQQGLKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIR 80
KK+EK+ +QQG+ N+YRL DL E ++ + DD+I ++
Sbjct: 412 KKIEKWAKQQGI--NAYRLYDADLPEYNLAVDR-------YDDHIVVQ 450
>sp|B3GZQ0|RLMKL_ACTP7 Ribosomal RNA large subunit methyltransferase K/L OS=Actinobacillus
pleuropneumoniae serotype 7 (strain AP76) GN=rlmL PE=3
SV=1
Length = 712
Score = 28.9 bits (63), Expect = 9.7, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 9/48 (18%)
Query: 33 KKLEKFLRQQGLKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIR 80
KK+EK+ +QQG+ N+YRL DL E ++ + DD+I ++
Sbjct: 412 KKIEKWAKQQGI--NAYRLYDADLPEYNLAVDR-------YDDHIVVQ 450
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,230,494
Number of Sequences: 539616
Number of extensions: 1285868
Number of successful extensions: 3420
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 3405
Number of HSP's gapped (non-prelim): 23
length of query: 97
length of database: 191,569,459
effective HSP length: 66
effective length of query: 31
effective length of database: 155,954,803
effective search space: 4834598893
effective search space used: 4834598893
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)