Query 034353
Match_columns 97
No_of_seqs 106 out of 436
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 21:39:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034353.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034353hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nxu_A Cytochrome P450 3A4; al 97.6 2.4E-05 8.2E-10 59.0 2.0 43 36-96 8-50 (485)
2 3s79_A Cytochrome P450 19A1; o 96.6 0.00043 1.5E-08 52.3 0.8 43 40-96 43-85 (503)
3 3k9v_A 1,25-dihydroxyvitamin D 95.0 0.014 4.8E-07 43.5 2.8 41 43-96 25-65 (482)
4 3tbg_A Cytochrome P450 2D6; mo 94.2 0.016 5.4E-07 43.2 1.5 43 37-96 3-47 (479)
5 1r9o_A Cytochrome P450 2C9; mo 94.1 0.017 5.7E-07 43.5 1.5 43 37-96 4-48 (477)
6 1po5_A Cytochrome P450 2B4; ox 93.7 0.023 7.8E-07 42.8 1.7 37 43-96 11-47 (476)
7 3e6i_A CYPIIE1, P450-J, cytoch 93.5 0.021 7.3E-07 42.5 1.1 36 44-96 12-47 (476)
8 3ld6_A Lanosterol 14-alpha dem 93.2 0.037 1.3E-06 41.5 2.1 36 43-96 9-48 (461)
9 2cd8_A Cytochrome P450 monooxy 93.1 0.02 6.8E-07 43.3 0.4 37 41-96 25-62 (436)
10 2fdv_A Cytochrome P450 2A6; CY 92.6 0.044 1.5E-06 41.3 1.7 43 37-96 3-47 (476)
11 3swz_A Steroid 17-alpha-hydrox 92.5 0.013 4.4E-07 44.2 -1.4 36 45-96 11-46 (494)
12 2hi4_A Cytochrome P450 1A2; CY 92.1 0.044 1.5E-06 41.5 1.2 36 43-96 17-52 (495)
13 2ij2_A Cytochrome P450 BM3; mo 92.1 0.054 1.8E-06 40.9 1.6 38 42-96 3-40 (470)
14 3pm0_A Cypib1, cytochrome P450 91.4 0.044 1.5E-06 41.1 0.5 37 42-96 9-45 (507)
15 3czh_A Cytochrome P450 2R1; vi 90.9 0.1 3.4E-06 39.5 2.0 38 44-96 14-51 (481)
16 3i3k_A Lanosterol 14-alpha dem 90.5 0.1 3.4E-06 38.9 1.7 35 45-97 14-49 (461)
17 3b98_A Prostaglandin I2 syntha 89.9 0.049 1.7E-06 40.6 -0.5 36 43-96 19-55 (475)
18 2ve3_A Putative cytochrome P45 89.4 0.28 9.5E-06 36.6 3.4 35 43-96 13-47 (444)
19 3b6h_A Prostacyclin synthase; 89.3 0.055 1.9E-06 40.8 -0.6 36 43-96 19-55 (498)
20 3dan_A Cytochrome P450 74A2; A 89.2 0.08 2.8E-06 39.4 0.3 41 43-96 10-52 (473)
21 3gw9_A Sterol 14alpha-demethyl 87.7 0.21 7.1E-06 36.7 1.6 35 44-96 5-41 (450)
22 3dsk_A Cytochrome P450 74A, ch 85.9 0.19 6.4E-06 37.8 0.6 41 43-96 29-70 (495)
23 2cib_A Cytochrome P450 51; hem 85.6 0.23 8E-06 37.1 0.9 36 43-96 5-41 (455)
24 3dax_A Cytochrome P450 7A1; ch 85.3 0.12 4.2E-06 38.6 -0.7 34 45-96 16-50 (491)
25 3v8d_A Cholesterol 7-alpha-mon 85.2 0.12 4.3E-06 38.8 -0.7 35 44-96 15-50 (491)
26 3qz1_A Steroid 21-hydroxylase; 77.3 0.67 2.3E-05 34.5 0.8 14 83-96 47-60 (496)
27 1izo_A P450bsbeta, cytochrome 74.8 1.5 5.2E-05 32.2 2.2 31 48-96 6-37 (417)
28 3n9y_A Cholesterol SIDE-chain 69.9 1.1 3.8E-05 33.3 0.4 40 43-96 10-49 (487)
29 3dbg_A Putative cytochrome P45 66.2 0.68 2.3E-05 34.5 -1.4 34 44-96 25-58 (467)
30 3awm_A Fatty acid alpha-hydrox 63.9 3.8 0.00013 30.0 2.3 32 44-96 4-36 (415)
31 3f75_P Toxopain-2, cathepsin L 54.6 5.6 0.00019 25.2 1.6 15 83-97 23-37 (106)
32 1jfb_A Nitric-oxide reductase 42.6 9.4 0.00032 27.8 1.4 30 45-96 4-33 (404)
33 1n97_A CYP175A1; electron tran 42.3 2.1 7.2E-05 31.3 -2.2 33 46-96 3-35 (389)
34 3abb_A CYP105D6, cytochrome P4 28.9 19 0.00065 26.3 1.1 22 74-96 19-40 (408)
35 3me7_A Putative uncharacterize 27.6 58 0.002 20.7 3.3 34 31-64 77-111 (170)
36 3tnx_A Papain; hydrolase, cyto 25.4 31 0.001 26.1 1.8 18 80-97 61-78 (363)
37 4fb2_A P450CIN; heme, monooxyg 24.8 32 0.0011 24.9 1.7 21 76-96 16-38 (398)
38 3qj3_A Cathepsin L-like protei 24.2 34 0.0012 25.3 1.8 15 83-97 20-34 (331)
39 3qt4_A Cathepsin-L-like midgut 24.0 36 0.0012 25.2 1.9 15 83-97 25-39 (329)
40 2wwb_A Protein transport prote 23.9 2.6E+02 0.0089 21.8 7.4 31 21-51 371-406 (476)
41 3a4g_A Vitamin D hydroxylase; 22.7 34 0.0012 25.1 1.5 22 74-96 15-36 (411)
42 3aba_A Cytochrome P450; oxidor 22.5 36 0.0012 24.7 1.7 22 74-96 14-35 (403)
43 1n40_A P450 MT2, cytochrome P4 22.3 28 0.00095 25.3 1.0 20 76-96 13-32 (396)
44 1pci_A Procaricain; zymogen, h 22.1 38 0.0013 24.9 1.7 15 83-97 20-34 (322)
45 1u57_A GAG polyprotein, HIV-1; 21.1 25 0.00086 18.8 0.4 9 42-50 9-17 (48)
46 2xbk_A PIMD protein; epoxidati 21.0 40 0.0014 24.7 1.6 20 76-96 23-42 (404)
47 1vq8_X 50S ribosomal protein L 20.6 42 0.0014 20.8 1.4 18 34-51 54-71 (92)
No 1
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=97.56 E-value=2.4e-05 Score=58.99 Aligned_cols=43 Identities=12% Similarity=0.212 Sum_probs=33.9
Q ss_pred HHHHHHcCCCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCccccccchHHHHHHHhcCCCC
Q 034353 36 EKFLRQQGLKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYEPLM 96 (97)
Q Consensus 36 ~~~lr~QGI~Gpp~~~l~Gn~~e~~~~~~~a~s~~~~~shdi~~rv~P~~~~w~k~YGk~~ 96 (97)
..+++++|++||++..++||+.++. ....-++.+|.++||++|
T Consensus 8 ~~~~k~~~~PGP~~~PliGn~~~~~------------------~~~~~~~~~~~~~yG~i~ 50 (485)
T 3nxu_A 8 HGLFKKLGIPGPTPLPFLGNILSYH------------------KGFCMFDMECHKKYGKVW 50 (485)
T ss_dssp TTHHHHHTCCCCCCBTTTBTGGGGG------------------GCHHHHHHHHHHHHCSEE
T ss_pred chHHhhCCCCCCCCcCeecCcHHhh------------------cChHHHHHHHHHHcCCeE
Confidence 3688999999999999999985542 222346789999999876
No 2
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=96.64 E-value=0.00043 Score=52.34 Aligned_cols=43 Identities=16% Similarity=0.162 Sum_probs=30.5
Q ss_pred HHcCCCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCccccccchHHHHHHHhcCCCC
Q 034353 40 RQQGLKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYEPLM 96 (97)
Q Consensus 40 r~QGI~Gpp~~~l~Gn~~e~~~~~~~a~s~~~~~shdi~~rv~P~~~~w~k~YGk~~ 96 (97)
++++++||++-.++||+.++.+... + ...-.+.+|.++||++|
T Consensus 43 ~~~~pPGP~~~P~iGnl~~~~~~~~-----------~---~~~~~~~~~~~~yG~v~ 85 (503)
T 3s79_A 43 GTSSIPGPGYCMGIGPLISHGRFLW-----------M---GIGSACNYYNRVYGEFM 85 (503)
T ss_dssp --CCCCSCCCCSSSHHHHHHHHHHH-----------H---CHHHHHHHHHHHSCSEE
T ss_pred ccCCCCCCCCCceeeehhccccccc-----------c---chhHHHHHHHHHhCCeE
Confidence 4579999999999999988754211 1 11125788999999876
No 3
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=94.97 E-value=0.014 Score=43.52 Aligned_cols=41 Identities=20% Similarity=0.198 Sum_probs=29.6
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCccccccchHHHHHHHhcCCCC
Q 034353 43 GLKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYEPLM 96 (97)
Q Consensus 43 GI~Gpp~~~l~Gn~~e~~~~~~~a~s~~~~~shdi~~rv~P~~~~w~k~YGk~~ 96 (97)
.++||++..++||+.++.. ..-.....-++++|.++||++|
T Consensus 25 ~~PGP~~~p~iG~~~~~~~-------------~~~~~~~~~~~~~l~~~YG~i~ 65 (482)
T 3k9v_A 25 DLPGPTNWPLLGSLLEIFW-------------KGGLKKQHDTLAEYHKKYGQIF 65 (482)
T ss_dssp GCCCSCCCTTTBTHHHHHH-------------TTCGGGHHHHHHHHHHHHCSEE
T ss_pred CCCCCCCCCccccHHHHhc-------------cCCcccHHHHHHHHHHHcCCEE
Confidence 4999999999999988754 0001122236789999999876
No 4
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=94.17 E-value=0.016 Score=43.17 Aligned_cols=43 Identities=19% Similarity=0.210 Sum_probs=25.3
Q ss_pred HHHHHcC-CC-CCCCcCCCCCHHHHHHHHHHhhcCCCCCCCccccccchHHHHHHHhcCCCC
Q 034353 37 KFLRQQG-LK-GNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYEPLM 96 (97)
Q Consensus 37 ~~lr~QG-I~-Gpp~~~l~Gn~~e~~~~~~~a~s~~~~~shdi~~rv~P~~~~w~k~YGk~~ 96 (97)
|+-+++| ++ ||++-.++||+.++.. .+ ..-.+.+|.++||++|
T Consensus 3 ~~~ss~~kLPPGP~~lP~iGn~~~~~~-------------~~----~~~~~~~~~~kYG~i~ 47 (479)
T 3tbg_A 3 KKTSSKGKLPPGPLPLPGLGNLLHVDF-------------QN----TPYCFDQLRRRFGDVF 47 (479)
T ss_dssp ------CCCCCCSCCBTTTBTGGGCCT-------------TS----HHHHHHHHHHHHCSEE
T ss_pred CCCCCCCCCCCCCCCcCcccchHhhcC-------------CC----HHHHHHHHHHHhCCEE
Confidence 3444556 44 9988889999854411 11 1124789999999986
No 5
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=94.08 E-value=0.017 Score=43.49 Aligned_cols=43 Identities=16% Similarity=0.187 Sum_probs=22.5
Q ss_pred HHHHHc--CCCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCccccccchHHHHHHHhcCCCC
Q 034353 37 KFLRQQ--GLKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYEPLM 96 (97)
Q Consensus 37 ~~lr~Q--GI~Gpp~~~l~Gn~~e~~~~~~~a~s~~~~~shdi~~rv~P~~~~w~k~YGk~~ 96 (97)
+++++. .++||++..++||+.++. .....+++.+|.++||++|
T Consensus 4 ~~~~~~~~~pPgP~~~p~iG~~~~~~-----------------~~~~~~~~~~l~~~yG~v~ 48 (477)
T 1r9o_A 4 KTSSGRGKLPPGPTPLPVIGNILQIG-----------------IKDISKSLTNLSKVYGPVF 48 (477)
T ss_dssp -----CCBCCCCSSSCC-----CCBC-----------------HHHHHHHHHHHHHHHCSEE
T ss_pred ccccCCCCCCCCCCCCceeccHhhcC-----------------CCChHHHHHHHHHHhCCEE
Confidence 455555 578999999999985441 1112357789999999875
No 6
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=93.74 E-value=0.023 Score=42.82 Aligned_cols=37 Identities=16% Similarity=0.135 Sum_probs=27.1
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCccccccchHHHHHHHhcCCCC
Q 034353 43 GLKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYEPLM 96 (97)
Q Consensus 43 GI~Gpp~~~l~Gn~~e~~~~~~~a~s~~~~~shdi~~rv~P~~~~w~k~YGk~~ 96 (97)
.++||++..++||+.++. ......++.+|.++||++|
T Consensus 11 ~pPgP~~~p~iG~~~~~~-----------------~~~~~~~~~~l~~~yG~v~ 47 (476)
T 1po5_A 11 LPPGPSPLPVLGNLLQMD-----------------RKGLLRSFLRLREKYGDVF 47 (476)
T ss_dssp CCCCSCCBTTTBTGGGCC-----------------TTCHHHHHHHHHHHHCSEE
T ss_pred CCcCCCCCCccccHHhcc-----------------CCcHHHHHHHHHHHhCCEE
Confidence 578999999999985441 1112357889999999876
No 7
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=93.52 E-value=0.021 Score=42.53 Aligned_cols=36 Identities=14% Similarity=0.229 Sum_probs=26.5
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCccccccchHHHHHHHhcCCCC
Q 034353 44 LKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYEPLM 96 (97)
Q Consensus 44 I~Gpp~~~l~Gn~~e~~~~~~~a~s~~~~~shdi~~rv~P~~~~w~k~YGk~~ 96 (97)
.+||++..++||+.++. .....-++.+|.++||++|
T Consensus 12 pPgP~~~PliG~~~~~~-----------------~~~~~~~~~~~~~~yG~v~ 47 (476)
T 3e6i_A 12 PPGPFPLPIIGNLFQLE-----------------LKNIPKSFTRLAQRFGPVF 47 (476)
T ss_dssp CCCCCCBTTTBTGGGCC-----------------TTCHHHHHHHHHHHHCSEE
T ss_pred CcCCCCcccccChhhhc-----------------cccHhHHHHHHHHHhCCEE
Confidence 68999999999985441 1122246899999999986
No 8
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=93.22 E-value=0.037 Score=41.47 Aligned_cols=36 Identities=22% Similarity=0.388 Sum_probs=25.3
Q ss_pred CCCCCCC----cCCCCCHHHHHHHHHHhhcCCCCCCCccccccchHHHHHHHhcCCCC
Q 034353 43 GLKGNSY----RLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYEPLM 96 (97)
Q Consensus 43 GI~Gpp~----~~l~Gn~~e~~~~~~~a~s~~~~~shdi~~rv~P~~~~w~k~YGk~~ 96 (97)
|.++||. -.++||+.++.+ | | ..++.+|.++||++|
T Consensus 9 g~~~PP~~~~~lP~iG~~~~~~~--------------~--~--~~~~~~~~~kYG~i~ 48 (461)
T 3ld6_A 9 GVKSPPYIFSPIPFLGHAIAFGK--------------S--P--IEFLENAYEKYGPVF 48 (461)
T ss_dssp -CCCCCBCCCSSTTTBTHHHHHH--------------C--H--HHHHHHHHHHHCSEE
T ss_pred CCCCCCCCCCCcCeeeeHHHhhh--------------C--H--HHHHHHHHHHhCCEE
Confidence 6666653 347899988865 2 1 237899999999986
No 9
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=93.09 E-value=0.02 Score=43.32 Aligned_cols=37 Identities=24% Similarity=0.267 Sum_probs=19.8
Q ss_pred HcCCCCCCCcCCCCCHHH-HHHHHHHhhcCCCCCCCccccccchHHHHHHHhcCCCC
Q 034353 41 QQGLKGNSYRLLFGDLKE-NSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYEPLM 96 (97)
Q Consensus 41 ~QGI~Gpp~~~l~Gn~~e-~~~~~~~a~s~~~~~shdi~~rv~P~~~~w~k~YGk~~ 96 (97)
++|++||++.+++||..+ +.+ | -.+++++| ++||++|
T Consensus 25 ~~~~PGP~~~p~lG~~~~~~~~--------------~----p~~~~~~l-~~yGpv~ 62 (436)
T 2cd8_A 25 QQGTTASPPVLDLGALGQDFAA--------------D----PYPTYARL-RAEGPAH 62 (436)
T ss_dssp ---------CCBHHHHHHHHHH--------------C----CHHHHHHH-HTTCSEE
T ss_pred ccCCCCCCccccCCCCCccccc--------------C----hHHHHHHH-HHhCCee
Confidence 578999999999999863 322 2 13578888 8999875
No 10
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=92.57 E-value=0.044 Score=41.25 Aligned_cols=43 Identities=16% Similarity=0.239 Sum_probs=27.1
Q ss_pred HHHHHc-C-CCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCccccccchHHHHHHHhcCCCC
Q 034353 37 KFLRQQ-G-LKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYEPLM 96 (97)
Q Consensus 37 ~~lr~Q-G-I~Gpp~~~l~Gn~~e~~~~~~~a~s~~~~~shdi~~rv~P~~~~w~k~YGk~~ 96 (97)
+++++. + ++||++..++||+.++.. .| ...++.+|.++||++|
T Consensus 3 ~~~~~~~~~pPgP~~~p~iG~~~~~~~-------------~~----~~~~~~~l~~~yG~v~ 47 (476)
T 2fdv_A 3 KKTSSKGKLPPGPTPLPFIGNYLQLNT-------------EQ----MYNSLMKISERYGPVF 47 (476)
T ss_dssp -----CCBCCCCCCCBTTTBTGGGCCT-------------TB----HHHHHHHHHHHHCSEE
T ss_pred ccccccCCCCCCCCCCcccccHhhcCC-------------cc----hHHHHHHHHHHhCCEE
Confidence 345555 4 589999999999854410 11 2357889999999876
No 11
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=92.50 E-value=0.013 Score=44.23 Aligned_cols=36 Identities=22% Similarity=0.180 Sum_probs=22.8
Q ss_pred CCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCccccccchHHHHHHHhcCCCC
Q 034353 45 KGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYEPLM 96 (97)
Q Consensus 45 ~Gpp~~~l~Gn~~e~~~~~~~a~s~~~~~shdi~~rv~P~~~~w~k~YGk~~ 96 (97)
+||++-.++||+.++.+ + ....-.+.+|.++||++|
T Consensus 11 PgP~~lPliGnl~~l~~-------------~---~~~~~~~~~~~~kYG~i~ 46 (494)
T 3swz_A 11 KSLLSLPLVGSLPFLPR-------------H---GHMHNNFFKLQKKYGPIY 46 (494)
T ss_dssp -CCBCCCEEEEESSCTT-------------S---SCHHHHHHHTHHHHCSEE
T ss_pred CCCCCCCeEcchHHhCC-------------C---CchhHHHHHHHHHcCCEE
Confidence 46666889999833211 0 012236789999999976
No 12
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=92.12 E-value=0.044 Score=41.51 Aligned_cols=36 Identities=14% Similarity=0.101 Sum_probs=27.1
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCccccccchHHHHHHHhcCCCC
Q 034353 43 GLKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYEPLM 96 (97)
Q Consensus 43 GI~Gpp~~~l~Gn~~e~~~~~~~a~s~~~~~shdi~~rv~P~~~~w~k~YGk~~ 96 (97)
+++||++..++||+.++.+ | ...++.+|.++||++|
T Consensus 17 ~~PgP~~~p~~G~~~~~~~--------------~----~~~~~~~l~~~yG~v~ 52 (495)
T 2hi4_A 17 SPPEPWGWPLLGHVLTLGK--------------N----PHLALSRMSQRYGDVL 52 (495)
T ss_dssp CCCCCCCBTTTBTHHHHTT--------------C----HHHHHHHHHHHHCSEE
T ss_pred CCCCCCCCcceeeHHhcCc--------------c----HHHHHHHHHHHhCCEE
Confidence 4589999899999976622 1 1246789999999876
No 13
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=92.07 E-value=0.054 Score=40.91 Aligned_cols=38 Identities=11% Similarity=0.051 Sum_probs=27.3
Q ss_pred cCCCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCccccccchHHHHHHHhcCCCC
Q 034353 42 QGLKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYEPLM 96 (97)
Q Consensus 42 QGI~Gpp~~~l~Gn~~e~~~~~~~a~s~~~~~shdi~~rv~P~~~~w~k~YGk~~ 96 (97)
.+++||++..++||+.++.. .+ ....+.+|.++||++|
T Consensus 3 ~~~PGP~~~p~iG~l~~~~~-------------~~----~~~~~~~~~~~yG~v~ 40 (470)
T 2ij2_A 3 KEMPQPKTFGELKNLPLLNT-------------DK----PVQALMKIADELGEIF 40 (470)
T ss_dssp CCCCCCCCCGGGTTGGGGCS-------------SC----HHHHHHHHHHHHCSEE
T ss_pred CCCCCCCCCCccccHHHHhc-------------cc----chHHHHHHHHHhCCeE
Confidence 36899999999999855411 11 1236788999999876
No 14
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=91.38 E-value=0.044 Score=41.11 Aligned_cols=37 Identities=14% Similarity=0.127 Sum_probs=12.6
Q ss_pred cCCCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCccccccchHHHHHHHhcCCCC
Q 034353 42 QGLKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYEPLM 96 (97)
Q Consensus 42 QGI~Gpp~~~l~Gn~~e~~~~~~~a~s~~~~~shdi~~rv~P~~~~w~k~YGk~~ 96 (97)
.-.+||++..++||+.++.+ | ..-++.+|.++||++|
T Consensus 9 ~~pPgP~~~P~iG~~~~~~~--------------~----~~~~~~~~~~~yG~i~ 45 (507)
T 3pm0_A 9 GKPPGPFAWPLIGNAAAVGQ--------------A----AHLSFARLARRYGDVF 45 (507)
T ss_dssp -------------------C--------------C----HHHHHHHHHHHHCSEE
T ss_pred CCCcCCCCCCeeCchhhcCc--------------c----HHHHHHHHHHHhCCEE
Confidence 35789999999999866531 1 1236899999999876
No 15
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=90.86 E-value=0.1 Score=39.47 Aligned_cols=38 Identities=11% Similarity=0.148 Sum_probs=28.1
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCccccccchHHHHHHHhcCCCC
Q 034353 44 LKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYEPLM 96 (97)
Q Consensus 44 I~Gpp~~~l~Gn~~e~~~~~~~a~s~~~~~shdi~~rv~P~~~~w~k~YGk~~ 96 (97)
++||++..++||+.++.. .+ ....+++.+|.++||++|
T Consensus 14 pPgP~~~p~~G~~~~~~~-------------~~--~~~~~~~~~l~~~yG~v~ 51 (481)
T 3czh_A 14 PPGPPGLPFIGNIYSLAA-------------SS--ELPHVYMRKQSQVYGEIF 51 (481)
T ss_dssp CCCCCCBTTTBHHHHHHH-------------CS--SCHHHHHHHHHHHHCSEE
T ss_pred CCCCCCCcccccHhhcCc-------------cc--CcHHHHHHHHHHHhCCEE
Confidence 589999999999987744 00 012357899999999876
No 16
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=90.47 E-value=0.1 Score=38.90 Aligned_cols=35 Identities=20% Similarity=0.155 Sum_probs=24.8
Q ss_pred CC-CCCcCCCCCHHHHHHHHHHhhcCCCCCCCccccccchHHHHHHHhcCCCCC
Q 034353 45 KG-NSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYEPLMS 97 (97)
Q Consensus 45 ~G-pp~~~l~Gn~~e~~~~~~~a~s~~~~~shdi~~rv~P~~~~w~k~YGk~~~ 97 (97)
+| |++-.++||+.++.+ | + ..++.+|.++||++|+
T Consensus 14 Pg~P~~lP~iG~l~~~~~--------------~--~--~~~~~~~~~~yG~v~~ 49 (461)
T 3i3k_A 14 PYIFSPIPFLGHAIAFGK--------------S--P--IEFLENAYEKYGPVFS 49 (461)
T ss_dssp CBCCCSSTTTBTHHHHHH--------------C--H--HHHHHHHHHHHCSEEE
T ss_pred CCCCCCCCccccHHhhcc--------------C--H--HHHHHHHHHHhCCEEE
Confidence 45 445578999988754 1 1 2478899999998773
No 17
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=89.92 E-value=0.049 Score=40.62 Aligned_cols=36 Identities=11% Similarity=0.062 Sum_probs=27.6
Q ss_pred CCCCCCC-cCCCCCHHHHHHHHHHhhcCCCCCCCccccccchHHHHHHHhcCCCC
Q 034353 43 GLKGNSY-RLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYEPLM 96 (97)
Q Consensus 43 GI~Gpp~-~~l~Gn~~e~~~~~~~a~s~~~~~shdi~~rv~P~~~~w~k~YGk~~ 96 (97)
-.+||++ -.++||+.++.+ | | .+++++|.++||++|
T Consensus 19 ~pPgp~~~~P~iG~~~~~~~--------------~--~--~~~~~~l~~~yG~v~ 55 (475)
T 3b98_A 19 EPPLDKGMIPWLGHALEFGK--------------D--A--AKFLTRMKEKHGDIF 55 (475)
T ss_dssp CCCEECCSSTTTBTHHHHHH--------------C--H--HHHHHHHHHHHCSEE
T ss_pred CCCCCCCCcchHHhHHHHhh--------------C--H--HHHHHHHHHHhCCeE
Confidence 4678888 688999988743 2 1 357899999999876
No 18
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=89.44 E-value=0.28 Score=36.60 Aligned_cols=35 Identities=14% Similarity=0.080 Sum_probs=27.7
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCccccccchHHHHHHHhcCCCC
Q 034353 43 GLKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYEPLM 96 (97)
Q Consensus 43 GI~Gpp~~~l~Gn~~e~~~~~~~a~s~~~~~shdi~~rv~P~~~~w~k~YGk~~ 96 (97)
.++||++..++||+.++.+ | |. ++.+|.++||++|
T Consensus 13 ~pPgp~~~P~iG~~~~~~~--------------~--~~---~~~~~~~~yg~v~ 47 (444)
T 2ve3_A 13 IPPGDFGLPWLGETLNFLN--------------D--GD---FGKKRQQQFGPIF 47 (444)
T ss_dssp CCCCCCCBTTTBTHHHHHH--------------C--TT---HHHHHHHHHCSSE
T ss_pred CCCCCCCCCccccHHHHhc--------------C--cH---HHHHHHHHcCCeE
Confidence 5789999999999987754 2 22 5679999999876
No 19
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=89.33 E-value=0.055 Score=40.76 Aligned_cols=36 Identities=8% Similarity=0.013 Sum_probs=27.1
Q ss_pred CCCCCCC-cCCCCCHHHHHHHHHHhhcCCCCCCCccccccchHHHHHHHhcCCCC
Q 034353 43 GLKGNSY-RLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYEPLM 96 (97)
Q Consensus 43 GI~Gpp~-~~l~Gn~~e~~~~~~~a~s~~~~~shdi~~rv~P~~~~w~k~YGk~~ 96 (97)
-.+||++ -.++||+.++.+ | + ..++.+|.++||++|
T Consensus 19 ~PPgp~~~~P~iG~~~~~~~--------------~--~--~~~~~~l~~kYG~i~ 55 (498)
T 3b6h_A 19 EPPLDLGSIPWLGYALDFGK--------------D--A--ASFLTRMKEKHGDIF 55 (498)
T ss_dssp CCCEECCSSTTTBTHHHHHH--------------C--H--HHHHHHHHHHHCSEE
T ss_pred CCCCCCCCCcchhhHHHhcc--------------C--H--HHHHHHHHHHcCCeE
Confidence 3678888 578999987753 1 1 237899999999876
No 20
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=89.19 E-value=0.08 Score=39.41 Aligned_cols=41 Identities=10% Similarity=0.194 Sum_probs=29.8
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCcccc-ccchHHHHHHHhcCC-CC
Q 034353 43 GLKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAI-RVNPFLHKLVNDYEP-LM 96 (97)
Q Consensus 43 GI~Gpp~~~l~Gn~~e~~~~~~~a~s~~~~~shdi~~-rv~P~~~~w~k~YGk-~~ 96 (97)
.|+||.+-.++||+.++.+- .+.. ...+++.+|.++||+ +|
T Consensus 10 ~iPGp~g~P~iG~~~~~~~~-------------~~~~g~~~~~~~~~~~kyG~~vf 52 (473)
T 3dan_A 10 EIPGSYGIPFFQPIKDRLEY-------------FYGTGGRDEYFRSRMQKYQSTVF 52 (473)
T ss_dssp CCCCCCCSTTHHHHHHHHHH-------------HHSTTHHHHHHHHHHHHHTCSEE
T ss_pred CCCCCCCCcchhhHHHHHHH-------------HHhhcCchHHHHhHHHHhCCeEE
Confidence 58899888999999877541 1112 233689999999999 66
No 21
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=87.67 E-value=0.21 Score=36.72 Aligned_cols=35 Identities=6% Similarity=0.047 Sum_probs=25.3
Q ss_pred CCCCCC-cCCCCCHHHHHHHHHHhhcCCCCCCCccccccchHHHHHHHhcC-CCC
Q 034353 44 LKGNSY-RLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYE-PLM 96 (97)
Q Consensus 44 I~Gpp~-~~l~Gn~~e~~~~~~~a~s~~~~~shdi~~rv~P~~~~w~k~YG-k~~ 96 (97)
-+|||+ -.++||+.++.+ | + ..++.+|.++|| ++|
T Consensus 5 PPg~p~~~P~iG~~~~~~~--------------~--~--~~~~~~~~~~yG~~i~ 41 (450)
T 3gw9_A 5 PPVYPVTVPILGHIIQFGK--------------S--P--LGFMQECKRQLKSGIF 41 (450)
T ss_dssp CCBCCCCSTTTBTHHHHHH--------------C--H--HHHHHHHHHHHTCSEE
T ss_pred CCCCCCCcchhccHHHHcc--------------C--H--HHHHHHHHHHhCCCeE
Confidence 467776 567999988754 1 1 136799999999 876
No 22
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=85.92 E-value=0.19 Score=37.78 Aligned_cols=41 Identities=15% Similarity=0.256 Sum_probs=29.4
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCccccccchHHHHHHHhcCC-CC
Q 034353 43 GLKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYEP-LM 96 (97)
Q Consensus 43 GI~Gpp~~~l~Gn~~e~~~~~~~a~s~~~~~shdi~~rv~P~~~~w~k~YGk-~~ 96 (97)
-++||++-.++||+.++.+-. +...-..++.++.++||+ +|
T Consensus 29 ~pPGp~g~P~iG~~~~~~~~~-------------~~~~~~~f~~~~~~kyG~~Vf 70 (495)
T 3dsk_A 29 NIPGNYGLPIVGPIKDRWDYF-------------YDQGAEEFFKSRIRKYNSTVY 70 (495)
T ss_dssp CCCCCCCSTTHHHHHHHHHHH-------------TTSCHHHHHHHHHHHHTCSEE
T ss_pred CCCCCCCCCccchHHHHHHHH-------------HhcCcHHHHHHHHHHhCCceE
Confidence 578888888999998875411 011223589999999999 76
No 23
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=85.56 E-value=0.23 Score=37.14 Aligned_cols=36 Identities=11% Similarity=0.106 Sum_probs=26.0
Q ss_pred CCCC-CCCcCCCCCHHHHHHHHHHhhcCCCCCCCccccccchHHHHHHHhcCCCC
Q 034353 43 GLKG-NSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYEPLM 96 (97)
Q Consensus 43 GI~G-pp~~~l~Gn~~e~~~~~~~a~s~~~~~shdi~~rv~P~~~~w~k~YGk~~ 96 (97)
..+| |++..++||+.++.+ | | ..++.+|.++||++|
T Consensus 5 ~PPg~p~~~P~iG~~~~~~~--------------~--~--~~~~~~l~~~yG~v~ 41 (455)
T 2cib_A 5 ALPRVSGGHDEHGHLEEFRT--------------D--P--IGLMQRVRDELGDVG 41 (455)
T ss_dssp CCCBCSCCCBTTBTHHHHTT--------------C--H--HHHHHHHHHHHCSEE
T ss_pred CCCCCCCCCCCccCHHHHhh--------------C--h--HHHHHHHHHHcCCEE
Confidence 4566 667788999977632 2 1 257889999999875
No 24
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=85.29 E-value=0.12 Score=38.60 Aligned_cols=34 Identities=12% Similarity=-0.059 Sum_probs=22.5
Q ss_pred CCCCC-cCCCCCHHHHHHHHHHhhcCCCCCCCccccccchHHHHHHHhcCCCC
Q 034353 45 KGNSY-RLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYEPLM 96 (97)
Q Consensus 45 ~Gpp~-~~l~Gn~~e~~~~~~~a~s~~~~~shdi~~rv~P~~~~w~k~YGk~~ 96 (97)
+||++ -.++||+.++.+ | ...++.+|.++||++|
T Consensus 16 Pgp~~~~P~iG~~~~~~~--------------~----~~~~~~~~~~kyG~i~ 50 (491)
T 3dax_A 16 PLENGLIPYLGCALQFGA--------------N----PLEFLRANQRKHGHVF 50 (491)
T ss_dssp CEEEEEESCTTTTGGGTC--------------C----HHHHHHHHHHHHCSEE
T ss_pred CcCCCcccchhhHHHHhh--------------C----HHHHHHHHHHhcCCeE
Confidence 45555 478899854421 1 1237789999999876
No 25
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=85.23 E-value=0.12 Score=38.80 Aligned_cols=35 Identities=9% Similarity=-0.110 Sum_probs=26.2
Q ss_pred CCCCCCc-CCCCCHHHHHHHHHHhhcCCCCCCCccccccchHHHHHHHhcCCCC
Q 034353 44 LKGNSYR-LLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYEPLM 96 (97)
Q Consensus 44 I~Gpp~~-~l~Gn~~e~~~~~~~a~s~~~~~shdi~~rv~P~~~~w~k~YGk~~ 96 (97)
-+||++. .++||+.++ ...-.+++.+|.++||++|
T Consensus 15 PPgp~~~lPliG~~~~~------------------~~~p~~~~~~l~~~yGpv~ 50 (491)
T 3v8d_A 15 PPLENGLIPYLGCALQF------------------GANPLEFLRANQRKHGHVF 50 (491)
T ss_dssp CCEEEEEESSTTTTGGG------------------TCCHHHHHHHHHHHHCSEE
T ss_pred CCCCCCCcceeccHHHH------------------hcCHHHHHHHHHHHcCCce
Confidence 4688884 889998554 2233468999999999876
No 26
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=77.31 E-value=0.67 Score=34.55 Aligned_cols=14 Identities=21% Similarity=0.313 Sum_probs=11.3
Q ss_pred hHHHHHHHhcCCCC
Q 034353 83 PFLHKLVNDYEPLM 96 (97)
Q Consensus 83 P~~~~w~k~YGk~~ 96 (97)
..+.+|.++||++|
T Consensus 47 ~~~~~l~~~yG~v~ 60 (496)
T 3qz1_A 47 IHLLSLTQKLGPVY 60 (496)
T ss_dssp HHHHHGGGTSCSEE
T ss_pred HHHHHHHHHhCCEE
Confidence 46788999999876
No 27
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=74.84 E-value=1.5 Score=32.25 Aligned_cols=31 Identities=10% Similarity=0.028 Sum_probs=22.5
Q ss_pred CCcCCCCCHHHHHHHHHHhhcCCCCCCCccccccchHHHHHHHhcC-CCC
Q 034353 48 SYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYE-PLM 96 (97)
Q Consensus 48 p~~~l~Gn~~e~~~~~~~a~s~~~~~shdi~~rv~P~~~~w~k~YG-k~~ 96 (97)
|...++||..++.+ | | .++++++.++|| ++|
T Consensus 6 Pg~P~lG~~~~~~~--------------~--p--~~~~~~l~~~yg~pv~ 37 (417)
T 1izo_A 6 PHDKSLDNSLTLLK--------------E--G--YLFIKNRTERYNSDLF 37 (417)
T ss_dssp CBCCCTTHHHHHHH--------------H--G--GGHHHHHHHHTTSSEE
T ss_pred CCCCccchHHHHhh--------------C--c--HHHHHHHHHHhCCCeE
Confidence 33368999988754 2 1 358999999998 665
No 28
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=69.92 E-value=1.1 Score=33.26 Aligned_cols=40 Identities=13% Similarity=0.011 Sum_probs=23.8
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCccccccchHHHHHHHhcCCCC
Q 034353 43 GLKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYEPLM 96 (97)
Q Consensus 43 GI~Gpp~~~l~Gn~~e~~~~~~~a~s~~~~~shdi~~rv~P~~~~w~k~YGk~~ 96 (97)
.++||+..-+ +|+.++... +-......++.+|.++||++|
T Consensus 10 ~~PGP~~~~~-~~~~~~~~~-------------~~~~~~~~~~~~l~~kYG~i~ 49 (487)
T 3n9y_A 10 EIPSPGDNGW-LNLYHFWRE-------------TGTHKVHLHHVQNFQKYGPIY 49 (487)
T ss_dssp GSCCSCSCHH-HHHHHHHHH-------------TCGGGHHHHHHHHHHHHCSEE
T ss_pred hCCCCCCCCh-hhHHHHHhc-------------CCCcchhHHHHHHHHHcCcee
Confidence 3789876433 376655331 001122236789999999876
No 29
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=66.21 E-value=0.68 Score=34.54 Aligned_cols=34 Identities=12% Similarity=0.031 Sum_probs=25.4
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCccccccchHHHHHHHhcCCCC
Q 034353 44 LKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYEPLM 96 (97)
Q Consensus 44 I~Gpp~~~l~Gn~~e~~~~~~~a~s~~~~~shdi~~rv~P~~~~w~k~YGk~~ 96 (97)
.+||++-.++||+.++.+ | -.+++.++.+ ||++|
T Consensus 25 pPgP~~~P~iG~~~~~~~--------------~----p~~~~~~l~~-yGpv~ 58 (467)
T 3dbg_A 25 PVAGGGVPLLGHGWRLAR--------------D----PLAFMSQLRD-HGDVV 58 (467)
T ss_dssp CEECCCCSTTHHHHHHHH--------------C----HHHHHHHHGG-GCSEE
T ss_pred CCCCCCCCcccchHHhcc--------------C----HHHHHHHHHH-hCCEE
Confidence 568888889999988754 2 1257788877 99876
No 30
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=63.87 E-value=3.8 Score=30.02 Aligned_cols=32 Identities=3% Similarity=-0.117 Sum_probs=20.6
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCccccccchHHHHHHHhc-CCCC
Q 034353 44 LKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDY-EPLM 96 (97)
Q Consensus 44 I~Gpp~~~l~Gn~~e~~~~~~~a~s~~~~~shdi~~rv~P~~~~w~k~Y-Gk~~ 96 (97)
++|| .++||..++.+ | | .+++.++.++| |++|
T Consensus 4 pPg~---P~iG~~~~~~~--------------~--p--~~~~~~l~~~y~gpv~ 36 (415)
T 3awm_A 4 TPHT---KGPDETLSLLA--------------D--P--YRFISRQCQRLGANAF 36 (415)
T ss_dssp --------CCCCHHHHHH--------------S--T--TTHHHHHHHHHTSSEE
T ss_pred CCCC---CccchHHHHHh--------------C--h--HHHHHHHHHHhCCCeE
Confidence 4555 58999988754 2 1 36889999999 6765
No 31
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii}
Probab=54.62 E-value=5.6 Score=25.19 Aligned_cols=15 Identities=7% Similarity=0.049 Sum_probs=13.2
Q ss_pred hHHHHHHHhcCCCCC
Q 034353 83 PFLHKLVNDYEPLMS 97 (97)
Q Consensus 83 P~~~~w~k~YGk~~~ 97 (97)
-.|.+|.++|||.|+
T Consensus 23 ~~F~~wk~~~~K~Y~ 37 (106)
T 3f75_P 23 DAFSSFQAMYAKSYA 37 (106)
T ss_dssp HHHHHHHHHHTCCCS
T ss_pred HHHHHHHHHhCCcCC
Confidence 478999999999984
No 32
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=42.61 E-value=9.4 Score=27.75 Aligned_cols=30 Identities=13% Similarity=-0.006 Sum_probs=18.6
Q ss_pred CCCCCcCCCCCHHHHHHHHHHhhcCCCCCCCccccccchHHHHHHHhcCCCC
Q 034353 45 KGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYEPLM 96 (97)
Q Consensus 45 ~Gpp~~~l~Gn~~e~~~~~~~a~s~~~~~shdi~~rv~P~~~~w~k~YGk~~ 96 (97)
+||++-.+.||.. + -| .+.+++|. +||++|
T Consensus 4 PGp~~~P~~g~~~------------------~-~p--~~~~~~l~-~~Gpv~ 33 (404)
T 1jfb_A 4 SGAPSFPFSRASG------------------P-EP--PAEFAKLR-ATNPVS 33 (404)
T ss_dssp --CCBSSCCCSST------------------T-SC--CTHHHHHH-HHCSEE
T ss_pred CCCCCCCCCCCcC------------------C-Cc--cHHHHHHH-HhCCee
Confidence 5888777788851 1 12 35778886 599875
No 33
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=42.25 E-value=2.1 Score=31.29 Aligned_cols=33 Identities=18% Similarity=0.003 Sum_probs=22.9
Q ss_pred CCCCcCCCCCHHHHHHHHHHhhcCCCCCCCccccccchHHHHHHHhcCCCC
Q 034353 46 GNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYEPLM 96 (97)
Q Consensus 46 Gpp~~~l~Gn~~e~~~~~~~a~s~~~~~shdi~~rv~P~~~~w~k~YGk~~ 96 (97)
+++-..++||+.++.+ | | .+++.+|.++||++|
T Consensus 3 ~~~~~p~iGnl~~~~~--------------~--p--~~~~~~l~~~yGpv~ 35 (389)
T 1n97_A 3 RLSLREAWPYLKDLQQ--------------D--P--LAVLLAWGRAHPRLF 35 (389)
T ss_dssp ECCHHHHHHHHHHHHH--------------C--H--HHHHHHHHHHCSEEE
T ss_pred ccccccccccHHHHhh--------------C--h--HHHHHHHHHHcCCee
Confidence 4455567888877643 2 1 257889999999875
No 34
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=28.86 E-value=19 Score=26.31 Aligned_cols=22 Identities=14% Similarity=0.117 Sum_probs=15.6
Q ss_pred CCccccccchHHHHHHHhcCCCC
Q 034353 74 DDNIAIRVNPFLHKLVNDYEPLM 96 (97)
Q Consensus 74 shdi~~rv~P~~~~w~k~YGk~~ 96 (97)
+.++...-.+.+.+| ++||++|
T Consensus 19 ~~~~~~~p~~~~~~l-~~yGpv~ 40 (408)
T 3abb_A 19 DRTCPYQPPKAYEER-RGESPLT 40 (408)
T ss_dssp CCSSTTSCCHHHHHH-CCSSSEE
T ss_pred CcccccCchHHHHHH-HhcCCee
Confidence 444444456788999 8899876
No 35
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=27.59 E-value=58 Score=20.73 Aligned_cols=34 Identities=12% Similarity=0.328 Sum_probs=25.3
Q ss_pred chHHHHHHHHHcCCCCCCCcCCC-CCHHHHHHHHH
Q 034353 31 RPKKLEKFLRQQGLKGNSYRLLF-GDLKENSIELK 64 (97)
Q Consensus 31 rP~rl~~~lr~QGI~Gpp~~~l~-Gn~~e~~~~~~ 64 (97)
.|..++++.++.|+..|...++. |+..++.++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~~~~~ 111 (170)
T 3me7_A 77 TLEDIKRFQKEYGIDGKGWKVVKAKTSEDLFKLLD 111 (170)
T ss_dssp CHHHHHHHHHHTTCCSSSEEEEEESSHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCCCCeEEEeCCCHHHHHHHHH
Confidence 46788888889999887777754 77777766544
No 36
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=25.41 E-value=31 Score=26.13 Aligned_cols=18 Identities=6% Similarity=0.135 Sum_probs=14.6
Q ss_pred ccchHHHHHHHhcCCCCC
Q 034353 80 RVNPFLHKLVNDYEPLMS 97 (97)
Q Consensus 80 rv~P~~~~w~k~YGk~~~ 97 (97)
++.=.|.+|.++|||+|+
T Consensus 61 ~~~~lf~~f~~~~~K~Y~ 78 (363)
T 3tnx_A 61 RLIQLFESWMLKHNKIYK 78 (363)
T ss_dssp HHHHHHHHHHHHTTCCCS
T ss_pred HHHHHHHHHHHHcCCcCC
Confidence 344568999999999984
No 37
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=24.78 E-value=32 Score=24.94 Aligned_cols=21 Identities=14% Similarity=0.208 Sum_probs=16.0
Q ss_pred ccccccchHHHHHHHhc--CCCC
Q 034353 76 NIAIRVNPFLHKLVNDY--EPLM 96 (97)
Q Consensus 76 di~~rv~P~~~~w~k~Y--Gk~~ 96 (97)
++...-.+++.+|.++| |++|
T Consensus 16 ~~~~~p~~~~~~l~~~Y~~Gpv~ 38 (398)
T 4fb2_A 16 GPDGTPHAFFEALRDEAETTPIG 38 (398)
T ss_dssp CTTSSSHHHHHHHHHHHTTCSEE
T ss_pred hhhcChhHHHHHHHhcCCCCCeE
Confidence 34444567899999999 9876
No 38
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=24.25 E-value=34 Score=25.29 Aligned_cols=15 Identities=7% Similarity=0.027 Sum_probs=13.3
Q ss_pred hHHHHHHHhcCCCCC
Q 034353 83 PFLHKLVNDYEPLMS 97 (97)
Q Consensus 83 P~~~~w~k~YGk~~~ 97 (97)
-.|.+|.++|||.|+
T Consensus 20 ~~f~~~~~~~~k~Y~ 34 (331)
T 3qj3_A 20 EKWENFKTTYARSYV 34 (331)
T ss_dssp HHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHhCCcCC
Confidence 478999999999984
No 39
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=23.99 E-value=36 Score=25.19 Aligned_cols=15 Identities=7% Similarity=-0.150 Sum_probs=13.1
Q ss_pred hHHHHHHHhcCCCCC
Q 034353 83 PFLHKLVNDYEPLMS 97 (97)
Q Consensus 83 P~~~~w~k~YGk~~~ 97 (97)
-.|.+|.++|||.|+
T Consensus 25 ~~f~~~~~~~~K~Y~ 39 (329)
T 3qt4_A 25 EQWSQFKLTHKKSYS 39 (329)
T ss_dssp HHHHHHHHHTTCCCS
T ss_pred HHHHHHHHHhCCcCC
Confidence 468999999999984
No 40
>2wwb_A Protein transport protein SEC61 subunit alpha ISO; ribosome, protein EXIT tunnel, cotranslational protein translocation, protein conducting channel; 6.48A {Canis lupus familiaris}
Probab=23.87 E-value=2.6e+02 Score=21.83 Aligned_cols=31 Identities=19% Similarity=0.275 Sum_probs=22.9
Q ss_pred HHHHHHHHH-----hchHHHHHHHHHcCCCCCCCcC
Q 034353 21 AWRVLNWVW-----LRPKKLEKFLRQQGLKGNSYRL 51 (97)
Q Consensus 21 ~~~~~~~~w-----~rP~rl~~~lr~QGI~Gpp~~~ 51 (97)
+..++...| ..|+.+.+.||+||..=|-.|.
T Consensus 371 f~~fyt~~Wv~i~g~np~dvA~~Lkk~G~~IpGiRp 406 (476)
T 2wwb_A 371 SCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRE 406 (476)
T ss_dssp HHHHHHHHHTTTSSCCHHHHHHHHHHHCTTTCCCCT
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHcCCccCCCCc
Confidence 345666677 7999999999999875444444
No 41
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=22.72 E-value=34 Score=25.10 Aligned_cols=22 Identities=14% Similarity=0.185 Sum_probs=15.6
Q ss_pred CCccccccchHHHHHHHhcCCCC
Q 034353 74 DDNIAIRVNPFLHKLVNDYEPLM 96 (97)
Q Consensus 74 shdi~~rv~P~~~~w~k~YGk~~ 96 (97)
++++...-.+++.+| ++||++|
T Consensus 15 ~~~~~~~p~~~~~~l-~~yGpv~ 36 (411)
T 3a4g_A 15 SGTFWQNPHPAYAAL-RAEDPVR 36 (411)
T ss_dssp SGGGTTCCHHHHHHH-HHHCSEE
T ss_pred CchhhcCchHHHHHH-HhcCCee
Confidence 445444445788999 8999876
No 42
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=22.46 E-value=36 Score=24.75 Aligned_cols=22 Identities=5% Similarity=0.027 Sum_probs=14.9
Q ss_pred CCccccccchHHHHHHHhcCCCC
Q 034353 74 DDNIAIRVNPFLHKLVNDYEPLM 96 (97)
Q Consensus 74 shdi~~rv~P~~~~w~k~YGk~~ 96 (97)
+.++...-.+++.+| ++||++|
T Consensus 14 ~~~~~~~p~~~~~~l-~~yGpv~ 35 (403)
T 3aba_A 14 ARSCPFLPPDGIADI-RAAAPVT 35 (403)
T ss_dssp CCSSTTSCCTTHHHH-HHHCSEE
T ss_pred CcccccChhHHHHHH-HhcCCee
Confidence 334433445688999 8899876
No 43
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=22.25 E-value=28 Score=25.32 Aligned_cols=20 Identities=20% Similarity=0.250 Sum_probs=14.5
Q ss_pred ccccccchHHHHHHHhcCCCC
Q 034353 76 NIAIRVNPFLHKLVNDYEPLM 96 (97)
Q Consensus 76 di~~rv~P~~~~w~k~YGk~~ 96 (97)
++...-.+++++| ++||++|
T Consensus 13 ~~~~~p~~~~~~l-~~yGpv~ 32 (396)
T 1n40_A 13 ARGDRIPDAVAEL-RTREPIR 32 (396)
T ss_dssp CCSSSCCHHHHHH-HHHCSEE
T ss_pred ccccCccHHHHHH-HHhCCee
Confidence 3333445789999 9999876
No 44
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=22.09 E-value=38 Score=24.90 Aligned_cols=15 Identities=0% Similarity=0.120 Sum_probs=13.0
Q ss_pred hHHHHHHHhcCCCCC
Q 034353 83 PFLHKLVNDYEPLMS 97 (97)
Q Consensus 83 P~~~~w~k~YGk~~~ 97 (97)
-.|.+|.++|||.|.
T Consensus 20 ~~f~~~~~~~~k~Y~ 34 (322)
T 1pci_A 20 QLFNSWMLNHNKFYE 34 (322)
T ss_dssp HHHHHHHHTTTCCCS
T ss_pred HHHHHHHHHcCCCCC
Confidence 368999999999983
No 45
>1u57_A GAG polyprotein, HIV-1; particle assembly, viral protein; NMR {Human immunodeficiency virus 1}
Probab=21.09 E-value=25 Score=18.79 Aligned_cols=9 Identities=33% Similarity=0.615 Sum_probs=7.1
Q ss_pred cCCCCCCCc
Q 034353 42 QGLKGNSYR 50 (97)
Q Consensus 42 QGI~Gpp~~ 50 (97)
||+.||.++
T Consensus 9 qgvggp~hK 17 (48)
T 1u57_A 9 QGVGGPGHK 17 (48)
T ss_dssp TTTSBCTTH
T ss_pred cCCCCCcch
Confidence 899888664
No 46
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=20.99 E-value=40 Score=24.73 Aligned_cols=20 Identities=25% Similarity=0.570 Sum_probs=14.3
Q ss_pred ccccccchHHHHHHHhcCCCC
Q 034353 76 NIAIRVNPFLHKLVNDYEPLM 96 (97)
Q Consensus 76 di~~rv~P~~~~w~k~YGk~~ 96 (97)
++...-.+++.+| ++||++|
T Consensus 23 ~~~~~p~~~~~~l-~~yGpv~ 42 (404)
T 2xbk_A 23 PKMLKLSPLLRAL-QDRGPIH 42 (404)
T ss_dssp CBTTBCCHHHHHH-HHHCSEE
T ss_pred ccccCccHHHHHH-HhhCCEe
Confidence 3333445788999 8999876
No 47
>1vq8_X 50S ribosomal protein L31E; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.29.1.1 PDB: 1vq4_X* 1vq5_X* 1vq6_X* 1vq7_X* 1s72_X* 1vq9_X* 1vqk_X* 1vql_X* 1vqm_X* 1vqn_X* 1vqo_X* 1vqp_X* 1yhq_X* 1yi2_X* 1yij_X* 1yit_X* 1yj9_X* 1yjn_X* 1yjw_X* 2otj_X* ...
Probab=20.58 E-value=42 Score=20.79 Aligned_cols=18 Identities=6% Similarity=0.189 Sum_probs=14.6
Q ss_pred HHHHHHHHcCCCCCCCcC
Q 034353 34 KLEKFLRQQGLKGNSYRL 51 (97)
Q Consensus 34 rl~~~lr~QGI~Gpp~~~ 51 (97)
+|-+..=++||+.||+++
T Consensus 54 ~LNk~iW~rGir~vP~rI 71 (92)
T 1vq8_X 54 SINEAAWARGRANTPSKI 71 (92)
T ss_dssp HHHHHHTTTCSSCCCSEE
T ss_pred HHHHHHHhcccCCCCceE
Confidence 566677789999999975
Done!