BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034359
(97 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|351722140|ref|NP_001235442.1| uncharacterized protein LOC100499745 [Glycine max]
gi|255626243|gb|ACU13466.1| unknown [Glycine max]
Length = 139
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 72/87 (82%), Gaps = 8/87 (9%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMD 57
MA+SVMAS ++LKPAPFTVEKS+ RGLPSL++ +SF++VA GGK IKTDKPYG+NGGM
Sbjct: 1 MASSVMAS-VALKPAPFTVEKSSVRGLPSLSRNSSSFRVVASGGKKIKTDKPYGINGGMA 59
Query: 58 LREGLDASGRKAK----YKFLNQQPLN 80
LREG+DASGRK K Y+F+++ N
Sbjct: 60 LREGVDASGRKGKGKGVYQFVDKYGAN 86
>gi|15219268|ref|NP_178025.1| photosystem II subunit R [Arabidopsis thaliana]
gi|131398|sp|P27202.1|PSBR_ARATH RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
Flags: Precursor
gi|16447|emb|CAA39441.1| photosystem II 10 kDa polypeptide [Arabidopsis thaliana]
gi|3152571|gb|AAC17052.1| Match to photosystem II 10kDa polypeptide gb|X55970. ESTs
gb|Z17693, gb|N37616, gb|T41858, gb|T88021, gb|R37531,
gb|T04679, gb|N37520, gb|N64965, gb|Z17592 and
gb|N65338, gb|N37466 and gb|T45400 come from this gene
[Arabidopsis thaliana]
gi|17979203|gb|AAL49840.1| putative photosystem II polypeptide protein [Arabidopsis
thaliana]
gi|20465469|gb|AAM20194.1| putative photosystem II polypeptide [Arabidopsis thaliana]
gi|21536748|gb|AAM61080.1| photosystem II polypeptide, putative [Arabidopsis thaliana]
gi|110740828|dbj|BAE98511.1| PSII-R protein [Arabidopsis thaliana]
gi|332198075|gb|AEE36196.1| photosystem II subunit R [Arabidopsis thaliana]
Length = 140
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/87 (66%), Positives = 70/87 (80%), Gaps = 7/87 (8%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSL--AKTSFKIVAKG-GKIKTDKPYGVNGGMD 57
MAASVM SS++LKPA FTVEK+AARGLPSL A+ SFKIVA G KIKTDKP+G+NG MD
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKTAARGLPSLTRARPSFKIVASGVKKIKTDKPFGINGSMD 60
Query: 58 LREGLDASGRKAK----YKFLNQQPLN 80
LR+G+DASGRK K YK++++ N
Sbjct: 61 LRDGVDASGRKGKGYGVYKYVDKYGAN 87
>gi|351722402|ref|NP_001236219.1| uncharacterized protein LOC100305752 [Glycine max]
gi|255626523|gb|ACU13606.1| unknown [Glycine max]
Length = 138
Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 70/86 (81%), Gaps = 7/86 (8%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGKIKTDKPYGVNGGMDL 58
MA+SVMAS ++LKPAPFTVEKS+ RGLPSL++ +SF++VA G KIKTDKPYG+NGGM L
Sbjct: 1 MASSVMAS-VALKPAPFTVEKSSVRGLPSLSRNSSSFRVVASGKKIKTDKPYGINGGMAL 59
Query: 59 REGLDASGRKAK----YKFLNQQPLN 80
R+G DASGRK K Y+F+++ N
Sbjct: 60 RDGTDASGRKGKGKGVYQFVDKYGAN 85
>gi|297839767|ref|XP_002887765.1| hypothetical protein ARALYDRAFT_477073 [Arabidopsis lyrata subsp.
lyrata]
gi|297333606|gb|EFH64024.1| hypothetical protein ARALYDRAFT_477073 [Arabidopsis lyrata subsp.
lyrata]
Length = 133
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/87 (66%), Positives = 70/87 (80%), Gaps = 7/87 (8%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSL--AKTSFKIVAKG-GKIKTDKPYGVNGGMD 57
MAASVM SS++LKPA FTVEK+AARGLPSL A+ SFKIVA G KIKTDKP+G+NG MD
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKAAARGLPSLTRARPSFKIVASGVKKIKTDKPFGINGSMD 60
Query: 58 LREGLDASGRKAK----YKFLNQQPLN 80
LR+G+DASGRK K YK++++ N
Sbjct: 61 LRDGVDASGRKGKGYGVYKYVDKYGAN 87
>gi|118489740|gb|ABK96671.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 136
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 5/84 (5%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLRE 60
MAASVMAS LSLKP+PFTVEKS+ RGLP+L++ +FKI A G KIKTD PYG GGM+LR+
Sbjct: 1 MAASVMAS-LSLKPSPFTVEKSSVRGLPTLSRRTFKIEASGVKIKTDTPYGTGGGMNLRD 59
Query: 61 GLDASGRKAK----YKFLNQQPLN 80
GLDASGRK K Y+++++ N
Sbjct: 60 GLDASGRKPKGKGVYQYVDKYGAN 83
>gi|1346871|sp|P49108.1|PSBR_BRACM RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
Flags: Precursor
gi|967968|gb|AAA74957.1| photosystem II 10kDa polypeptide [Brassica rapa subsp.
campestris]
Length = 141
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 69/88 (78%), Gaps = 8/88 (9%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK---TSFKIVAKG-GKIKTDKPYGVNGGM 56
MAASVM SS++LKPA FTVEK +ARGLPSL + +SF+IVA G KIKTDKP+GVNG M
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM 60
Query: 57 DLREGLDASGRKAK----YKFLNQQPLN 80
DLR+G+DASGRK K YKF+++ N
Sbjct: 61 DLRDGVDASGRKGKGYGVYKFVDKYGAN 88
>gi|119720780|gb|ABL97960.1| photosystem II 10kDa polytpeptide [Brassica rapa]
Length = 140
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 68/87 (78%), Gaps = 7/87 (8%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKG-GKIKTDKPYGVNGGMD 57
MAAS+M SS++LKPA FTVEK + RGLPSL + +SFKIVA G KIKTDKP+GVNG MD
Sbjct: 1 MAASLMLSSVTLKPAGFTVEKMSVRGLPSLTRAPSSFKIVASGVKKIKTDKPFGVNGSMD 60
Query: 58 LREGLDASGRKAK----YKFLNQQPLN 80
LR+GLDASGRK K YKF+++ N
Sbjct: 61 LRDGLDASGRKGKGYGVYKFVDKYGAN 87
>gi|193872616|gb|ACF23036.1| ST244 [Eutrema halophilum]
Length = 146
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 69/88 (78%), Gaps = 8/88 (9%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK---TSFKIVAKG-GKIKTDKPYGVNGGM 56
MAASVM SS++LKPA FTVEK +ARGLPSL + +SF+IVA G KIKTDKP+GVNG M
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM 60
Query: 57 DLREGLDASGRKAK----YKFLNQQPLN 80
DLR+G+DASGRK K YKF+++ N
Sbjct: 61 DLRDGVDASGRKGKGYGVYKFVDKYGAN 88
>gi|227204419|dbj|BAH57061.1| AT1G79040 [Arabidopsis thaliana]
Length = 77
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 63/74 (85%), Gaps = 3/74 (4%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSL--AKTSFKIVAKG-GKIKTDKPYGVNGGMD 57
MAASVM SS++LKPA FTVEK+AARGLPSL A+ SFKIVA G KIKTDKP+G+NG MD
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKTAARGLPSLTRARPSFKIVASGVKKIKTDKPFGINGSMD 60
Query: 58 LREGLDASGRKAKY 71
LR+G+DASGRK K
Sbjct: 61 LRDGVDASGRKGKV 74
>gi|8698891|gb|AAF78511.1|AF195209_1 polypeptide precursor of photosystem II [Pyrus pyrifolia]
Length = 82
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 67/82 (81%), Gaps = 7/82 (8%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKT--SFKIVAKGG-KIKTDKPYGVNGGMD 57
MAASVM SS+SLKP+PFTV+K A RGLPSL+++ SFK+ A GG KI+T PYG+NGGMD
Sbjct: 1 MAASVMTSSVSLKPSPFTVDKPAVRGLPSLSRSSASFKVQASGGKKIRTATPYGINGGMD 60
Query: 58 LREGLDASGRKAK----YKFLN 75
LR+G+DASGRK K Y+F++
Sbjct: 61 LRDGVDASGRKGKGKGVYQFVD 82
>gi|449460036|ref|XP_004147752.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
isoform 1 [Cucumis sativus]
gi|449460038|ref|XP_004147753.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
isoform 2 [Cucumis sativus]
gi|449502146|ref|XP_004161556.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
isoform 1 [Cucumis sativus]
gi|449502150|ref|XP_004161557.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
isoform 2 [Cucumis sativus]
Length = 138
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/87 (67%), Positives = 71/87 (81%), Gaps = 9/87 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSF--KIVAKGGK-IKTDKPYGVNGGMD 57
MAASVM +S+SLKPAPFTVEKSA+ GLPSLA+ SF K+VA GGK IKTDKPYG+NG M+
Sbjct: 1 MAASVM-TSVSLKPAPFTVEKSAS-GLPSLARKSFSFKVVASGGKKIKTDKPYGINGSMN 58
Query: 58 LREGLDASGRKAK----YKFLNQQPLN 80
LR+GLDASGRK K Y+F+++ N
Sbjct: 59 LRDGLDASGRKGKGKGVYQFVDKYGAN 85
>gi|121483553|gb|ABM54168.1| PSII 10Kd peptide [Brassica juncea]
Length = 141
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 8/88 (9%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK---TSFKIVAKG-GKIKTDKPYGVNGGM 56
MAASVM S ++LKPA FTVEK +ARGLPSL + +SF+IVA G KIKTDKP+GVNG M
Sbjct: 1 MAASVMLSPVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM 60
Query: 57 DLREGLDASGRKAK----YKFLNQQPLN 80
DLR+G+DASGRK K YKF+++ N
Sbjct: 61 DLRDGVDASGRKGKGYGVYKFVDEYGAN 88
>gi|118488826|gb|ABK96223.1| unknown [Populus trichocarpa x Populus deltoides]
gi|118488997|gb|ABK96306.1| unknown [Populus trichocarpa x Populus deltoides]
gi|118489823|gb|ABK96711.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 137
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 67/85 (78%), Gaps = 6/85 (7%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MAASVMAS LSLKP+PFTVEKS+ RGLP+L++ SFKI A G KIKTD PYG GGM+LR
Sbjct: 1 MAASVMAS-LSLKPSPFTVEKSSVRGLPTLSRRSFKIEASGVKKIKTDTPYGTGGGMNLR 59
Query: 60 EGLDASGRKAK----YKFLNQQPLN 80
+GLDASGRK K Y+++++ N
Sbjct: 60 DGLDASGRKPKGKGVYQYVDKYGAN 84
>gi|224115282|ref|XP_002332206.1| hypothetical protein POPTRDRAFT_674736 [Populus trichocarpa]
gi|118487848|gb|ABK95747.1| unknown [Populus trichocarpa]
gi|222875313|gb|EEF12444.1| hypothetical protein POPTRDRAFT_674736 [Populus trichocarpa]
Length = 137
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 67/85 (78%), Gaps = 6/85 (7%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MAASVMAS LSLKP+PFTVEKS+ RGLP+L++ +FKI A G KIKTD PYG GGM+LR
Sbjct: 1 MAASVMAS-LSLKPSPFTVEKSSVRGLPTLSRRTFKIEASGVKKIKTDTPYGTGGGMNLR 59
Query: 60 EGLDASGRKAK----YKFLNQQPLN 80
+GLDASGRK K Y+++++ N
Sbjct: 60 DGLDASGRKPKGKGVYQYVDKYGAN 84
>gi|158343304|gb|ABW35320.1| chloroplast photosystem II PsbR [Prosopis juliflora]
Length = 139
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/87 (66%), Positives = 72/87 (82%), Gaps = 8/87 (9%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKGGK-IKTDKPYGVNGGMD 57
MA+SVMAS +SLKPAPFTVEKSA RGLPSL+++S FK+VA GGK IKTDKPYG+NGGM+
Sbjct: 1 MASSVMAS-VSLKPAPFTVEKSAVRGLPSLSRSSSSFKVVASGGKKIKTDKPYGINGGMN 59
Query: 58 LREGLDASGRKAK----YKFLNQQPLN 80
L EG+D+SGRK K Y+F+++ N
Sbjct: 60 LVEGVDSSGRKGKGKGVYQFVDKYGTN 86
>gi|28207611|gb|AAO32060.1| photosystem II 10kDa polypeptide, partial [Brassica rapa subsp.
pekinensis]
Length = 137
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 65/84 (77%), Gaps = 7/84 (8%)
Query: 4 SVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKG-GKIKTDKPYGVNGGMDLRE 60
SVM SS++LKPA FTVEK + RGLPSL + +SFKIVA G KIKTDKP+GVNG MDLR+
Sbjct: 1 SVMLSSVTLKPAGFTVEKMSVRGLPSLTRAPSSFKIVASGVKKIKTDKPFGVNGSMDLRD 60
Query: 61 GLDASGRKAK----YKFLNQQPLN 80
GLDASGRK K YKF+++ N
Sbjct: 61 GLDASGRKGKGYGVYKFVDKYGAN 84
>gi|225462227|ref|XP_002271791.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic
[Vitis vinifera]
gi|147789486|emb|CAN71762.1| hypothetical protein VITISV_021149 [Vitis vinifera]
gi|296082806|emb|CBI21811.3| unnamed protein product [Vitis vinifera]
Length = 139
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 68/87 (78%), Gaps = 8/87 (9%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKGGK-IKTDKPYGVNGGMD 57
MAASVM SSLSLKP+PF+VE+ A RGLPSLA++S F++ A GGK IKTDKPYG+ GGM
Sbjct: 1 MAASVM-SSLSLKPSPFSVERRAVRGLPSLARSSSSFRVEASGGKKIKTDKPYGIGGGMK 59
Query: 58 LREGLDASGRKAK----YKFLNQQPLN 80
L +GLDASGRK K Y+F+++ N
Sbjct: 60 LSDGLDASGRKGKGKGVYQFVDKYGAN 86
>gi|224115372|ref|XP_002317015.1| hypothetical protein POPTRDRAFT_569170 [Populus trichocarpa]
gi|118488264|gb|ABK95951.1| unknown [Populus trichocarpa]
gi|222860080|gb|EEE97627.1| hypothetical protein POPTRDRAFT_569170 [Populus trichocarpa]
Length = 137
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/77 (68%), Positives = 62/77 (80%), Gaps = 2/77 (2%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MAASVMAS L+LKP+PFTVEKS+ RGLP+L++ SFKI A G KIKTD PYG GGM+LR
Sbjct: 1 MAASVMAS-LNLKPSPFTVEKSSVRGLPTLSRRSFKIEASGVKKIKTDTPYGTGGGMNLR 59
Query: 60 EGLDASGRKAKYKFLNQ 76
GLDASGRK + K + Q
Sbjct: 60 NGLDASGRKPRGKGVYQ 76
>gi|284520974|gb|ADB93062.1| chloroplast photosystem II 10 kDa polypeptide [Jatropha curcas]
Length = 137
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%), Gaps = 6/85 (7%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDLR 59
MA SVMAS +SLKP+PF+V+KS+ RGLP L++ +FK+ A GGK IKTDKPYG+ GGM+LR
Sbjct: 1 MATSVMAS-VSLKPSPFSVQKSSVRGLPKLSRRAFKVEAGGGKKIKTDKPYGIGGGMNLR 59
Query: 60 EGLDASGRKAK----YKFLNQQPLN 80
GLDASGRKA Y+++++ N
Sbjct: 60 NGLDASGRKATGKGVYQYVDKYGAN 84
>gi|146454590|gb|ABQ41961.1| photosystem II 10 kDa polypeptide [Sonneratia alba]
Length = 121
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 62/77 (80%), Gaps = 6/77 (7%)
Query: 10 LSLKPAPFTVEKSAARGLPSLAKTS-FKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGR 67
+SLKPAPFT E+SAARGLPSLA+TS K+ A GGK IKTDKPYG+NGGMDLR+G DASGR
Sbjct: 1 VSLKPAPFTAERSAARGLPSLARTSTLKVQASGGKKIKTDKPYGINGGMDLRDGKDASGR 60
Query: 68 KAK----YKFLNQQPLN 80
K + Y+F+++ N
Sbjct: 61 KPRGKGVYQFVDKYGAN 77
>gi|83776786|gb|ABC46708.1| chloroplast photosystem II 10 kDa protein [Arachis hypogaea]
Length = 129
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 61/76 (80%), Gaps = 7/76 (9%)
Query: 12 LKPAPFTVEKSAARGLPSL--AKTSFKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGRK 68
LKPAPFT E+S+ RG+PSL A +SFK+VA GGK IKTDKPYG+NGGM+LR+GLDASGRK
Sbjct: 1 LKPAPFTAERSSVRGIPSLSRASSSFKVVASGGKKIKTDKPYGINGGMNLRDGLDASGRK 60
Query: 69 AK----YKFLNQQPLN 80
K Y+F+++ N
Sbjct: 61 GKGKGVYQFVDKYGAN 76
>gi|146454592|gb|ABQ41962.1| photosystem II 10 kDa polypeptide [Sonneratia caseolaris]
Length = 121
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 62/77 (80%), Gaps = 6/77 (7%)
Query: 10 LSLKPAPFTVEKSAARGLPSLAKTS-FKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGR 67
+SLKPAPFT E+SAARGLPSLA+TS K+ A GGK IKTDKPYG+NGGM+LR+G DASGR
Sbjct: 1 VSLKPAPFTAERSAARGLPSLARTSTLKVQASGGKKIKTDKPYGINGGMNLRDGKDASGR 60
Query: 68 KAK----YKFLNQQPLN 80
K K Y+F+++ N
Sbjct: 61 KPKGKGVYQFVDKYGAN 77
>gi|255578166|ref|XP_002529952.1| Photosystem II 10 kDa polypeptide, chloroplast precursor,
putative [Ricinus communis]
gi|223530550|gb|EEF32429.1| Photosystem II 10 kDa polypeptide, chloroplast precursor,
putative [Ricinus communis]
Length = 138
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 69/86 (80%), Gaps = 7/86 (8%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAA-RGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDL 58
MA+SVMAS +SLKP+PFTV+KS++ RGLP+L++ +F+I A GGK IKTDKPYG+ GGM+L
Sbjct: 1 MASSVMAS-VSLKPSPFTVQKSSSVRGLPTLSRRTFRIEASGGKKIKTDKPYGIGGGMEL 59
Query: 59 REGLDASGRKAK----YKFLNQQPLN 80
R G+DASGRK Y+F+++ N
Sbjct: 60 RNGVDASGRKPTGKGVYQFVDKYGAN 85
>gi|146454594|gb|ABQ41963.1| photosystem II 10 kDa polypeptide [Sonneratia ovata]
gi|146454596|gb|ABQ41964.1| photosystem II 10 kDa polypeptide [Sonneratia apetala]
Length = 121
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 62/77 (80%), Gaps = 6/77 (7%)
Query: 10 LSLKPAPFTVEKSAARGLPSLAKTS-FKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGR 67
+SLKPAPFT E+SAARGLPSLA+TS K+ A GGK IKTDKPYG+NGGM+LR+G DASGR
Sbjct: 1 VSLKPAPFTAERSAARGLPSLARTSTLKVQASGGKKIKTDKPYGINGGMNLRDGKDASGR 60
Query: 68 KAK----YKFLNQQPLN 80
K + Y+F+++ N
Sbjct: 61 KPRGKGVYQFVDKYGAN 77
>gi|224115278|ref|XP_002332205.1| predicted protein [Populus trichocarpa]
gi|222875312|gb|EEF12443.1| predicted protein [Populus trichocarpa]
Length = 141
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%), Gaps = 7/85 (8%)
Query: 3 ASVMASSLSLKPAPFTVEK-SAARGLPSLAK-TSFKIVA-KGGKIKTDKPYGVNGGMDLR 59
+SVMA S+SLKPAPFTV+K S+ RGLP+LA+ +SFK+ A + K TD+PYG+NGGMDLR
Sbjct: 4 SSVMAPSISLKPAPFTVKKPSSVRGLPTLARRSSFKVEASRTRKTNTDQPYGINGGMDLR 63
Query: 60 EGLDASGRKAK----YKFLNQQPLN 80
EG+DASGRK K Y+F+++ N
Sbjct: 64 EGVDASGRKGKGKGVYQFVDKYGAN 88
>gi|388503488|gb|AFK39810.1| unknown [Lotus japonicus]
gi|388512023|gb|AFK44073.1| unknown [Lotus japonicus]
Length = 139
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 68/87 (78%), Gaps = 8/87 (9%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKGGK-IKTDKPYGVNGGMD 57
MA+SVMAS +SLKPA F++EKS+ RGLPSL+++S F++VA GGK IKTD PYG GGM+
Sbjct: 1 MASSVMAS-VSLKPAGFSLEKSSVRGLPSLSRSSASFRVVASGGKKIKTDTPYGTGGGMN 59
Query: 58 LREGLDASGRKAK----YKFLNQQPLN 80
LR G+DASGRK + Y+++++ N
Sbjct: 60 LRNGVDASGRKPRGKGVYQYVDKYGAN 86
>gi|148279894|gb|ABQ53998.1| 10 kDa photosystem II polypeptide [Cicer arietinum]
Length = 106
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 64/85 (75%), Gaps = 7/85 (8%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MA+SVMAS LSLKP PFT+EKS+ +GLPS+++ F++VA G KIKTD PYG GGMDL
Sbjct: 1 MASSVMAS-LSLKPTPFTIEKSSVKGLPSISR-PFRVVASGIKKIKTDTPYGTGGGMDLP 58
Query: 60 EGLDASGRKAK----YKFLNQQPLN 80
GLDASGRK K Y+F+++ N
Sbjct: 59 NGLDASGRKQKGKGVYQFVDKYGAN 83
>gi|3914472|sp|Q40519.1|PSBR_TOBAC RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
Short=PII10; Flags: Precursor
gi|22669|emb|CAA49693.1| NtpII10 [Nicotiana tabacum]
Length = 136
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 66/87 (75%), Gaps = 11/87 (12%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMD 57
MA++VM SLKPAPF+VEK+A +GLPSLA++S F++ A G K+KTDKPYG+NG M
Sbjct: 1 MASTVM----SLKPAPFSVEKTAVKGLPSLARSSSSFRVQASGVKKLKTDKPYGINGSMS 56
Query: 58 LREGLDASGRKAK----YKFLNQQPLN 80
LR+G+DASGRK K Y+F+++ N
Sbjct: 57 LRDGVDASGRKQKGKGVYQFVDKYGAN 83
>gi|112292665|gb|ABI14811.1| chloroplast photosystem II light-inducible protein [Pachysandra
terminalis]
Length = 138
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKG-GKIKTDKPYGVNGGMD 57
MA SVM SSLSLK +PF +EKSAARGLPSLA+ +SF++ A G KIKTDKPYG GGM
Sbjct: 1 MATSVM-SSLSLKASPF-LEKSAARGLPSLARPSSSFRVEASGVKKIKTDKPYGTGGGMS 58
Query: 58 LREGLDASGRKAK----YKFLNQQPLN 80
LR+GLDASGRK K Y+F+++ N
Sbjct: 59 LRDGLDASGRKPKGKGVYQFVDKYGAN 85
>gi|33694227|gb|AAQ24852.1| 10 kDa photosystem II polypeptide [Trifolium pratense]
Length = 136
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 63/85 (74%), Gaps = 7/85 (8%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MA+SVMAS +SLKP PF VEKS+ RGLP+L++ F++VA G KIKTD PYG GGMDL
Sbjct: 1 MASSVMAS-VSLKPTPFMVEKSSVRGLPNLSR-PFRVVASGVKKIKTDTPYGTGGGMDLP 58
Query: 60 EGLDASGRKAK----YKFLNQQPLN 80
GLDASGRK K Y+F+++ N
Sbjct: 59 NGLDASGRKQKGKGVYQFVDKYGAN 83
>gi|21491|emb|CAA27989.1| unnamed protein product [Solanum tuberosum]
Length = 138
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 68/87 (78%), Gaps = 9/87 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMD 57
MA++VM SSLSLKP FT+EK++ +GLPSLA++S FK+VA G K+KTDKPYG+NG M
Sbjct: 1 MASTVM-SSLSLKPT-FTLEKTSVKGLPSLARSSSPFKVVASGVKKLKTDKPYGINGSMA 58
Query: 58 LREGLDASGRKAK----YKFLNQQPLN 80
LR+GLDASGRK K Y+++++ N
Sbjct: 59 LRDGLDASGRKPKGKGVYQYVDKYGAN 85
>gi|131399|sp|P06183.1|PSBR_SOLTU RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
AltName: Full=Light-inducible tissue-specific ST-LS1
protein; Flags: Precursor
gi|21489|emb|CAA28450.1| ST-LS1 protein [Solanum tuberosum]
gi|413968448|gb|AFW90561.1| light inducible tissue-specific ST-LS1 [Solanum tuberosum]
gi|413968538|gb|AFW90606.1| light inducible tissue-specific ST-LS1 [Solanum tuberosum]
gi|418730663|gb|AFX66996.1| photosystem II 10 kDa polypeptide [Solanum tuberosum]
Length = 138
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 68/87 (78%), Gaps = 9/87 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMD 57
MA++VM SSLSLKP FT+EK++ +GLPSLA++S FK+VA G K+KTDKPYG+NG M
Sbjct: 1 MASTVM-SSLSLKPT-FTLEKTSVKGLPSLARSSSSFKVVASGVKKLKTDKPYGINGSMA 58
Query: 58 LREGLDASGRKAK----YKFLNQQPLN 80
LR+G+DASGRK K Y+++++ N
Sbjct: 59 LRDGVDASGRKPKGKGVYQYVDKYGAN 85
>gi|357451409|ref|XP_003595981.1| Photosystem II 10 kDa polypeptide [Medicago truncatula]
gi|355485029|gb|AES66232.1| Photosystem II 10 kDa polypeptide [Medicago truncatula]
gi|388509646|gb|AFK42889.1| unknown [Medicago truncatula]
Length = 136
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 62/85 (72%), Gaps = 7/85 (8%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MA+SVMAS +SLKP PF VEKS+ RGLP+L++ FK+VA G KIKTD PYG GGM L
Sbjct: 1 MASSVMAS-VSLKPTPFRVEKSSVRGLPALSR-PFKVVASGVKKIKTDTPYGTGGGMALP 58
Query: 60 EGLDASGRKAK----YKFLNQQPLN 80
+G DASGRK K Y+F+++ N
Sbjct: 59 DGKDASGRKQKGKGVYQFVDKYGAN 83
>gi|357451413|ref|XP_003595983.1| Photosystem II 10 kDa polypeptide [Medicago truncatula]
gi|355485031|gb|AES66234.1| Photosystem II 10 kDa polypeptide [Medicago truncatula]
Length = 88
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 62/85 (72%), Gaps = 7/85 (8%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MA+SVMAS +SLKP PF VEKS+ RGLP+L++ FK+VA G KIKTD PYG GGM L
Sbjct: 1 MASSVMAS-VSLKPTPFRVEKSSVRGLPALSRP-FKVVASGVKKIKTDTPYGTGGGMALP 58
Query: 60 EGLDASGRKAK----YKFLNQQPLN 80
+G DASGRK K Y+F+++ N
Sbjct: 59 DGKDASGRKQKGKGVYQFVDKYGAN 83
>gi|350537547|ref|NP_001234042.1| photosystem II 10 kDa polypeptide, chloroplastic [Solanum
lycopersicum]
gi|3914471|sp|Q40163.1|PSBR_SOLLC RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
Flags: Precursor
gi|1217642|emb|CAA65231.1| PSII polypeptide [Solanum lycopersicum]
Length = 138
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMD 57
MA++VM SSLSLKP FT+EK + +GLPSL ++S FK+VA G K+KTDKPYG+NG M
Sbjct: 1 MASTVM-SSLSLKPT-FTLEKISVKGLPSLTRSSSSFKVVASGVKKLKTDKPYGINGSMA 58
Query: 58 LREGLDASGRKAK----YKFLNQQPLN 80
LR+G+DASGRK K Y+++++ N
Sbjct: 59 LRDGVDASGRKPKGKGVYQYVDKYGAN 85
>gi|357451411|ref|XP_003595982.1| Photosystem II 10 kDa polypeptide [Medicago truncatula]
gi|355485030|gb|AES66233.1| Photosystem II 10 kDa polypeptide [Medicago truncatula]
Length = 127
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 62/85 (72%), Gaps = 7/85 (8%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MA+SVMAS +SLKP PF VEKS+ RGLP+L++ FK+VA G KIKTD PYG GGM L
Sbjct: 1 MASSVMAS-VSLKPTPFRVEKSSVRGLPALSR-PFKVVASGVKKIKTDTPYGTGGGMALP 58
Query: 60 EGLDASGRKAK----YKFLNQQPLN 80
+G DASGRK K Y+F+++ N
Sbjct: 59 DGKDASGRKQKGKGVYQFVDKYGAN 83
>gi|241865170|gb|ACS68663.1| photosystem II 10 kDa polypeptide [Sonneratia alba]
gi|241865402|gb|ACS68733.1| photosystem II 10 kDa polypeptide [Sonneratia alba]
Length = 114
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 6/67 (8%)
Query: 20 EKSAARGLPSLAKTS-FKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGRKAK----YKF 73
E+SAARGLPSLA+TS K+ A GGK IKTDKPYG+NGGMDLR+G DASGRK + Y+F
Sbjct: 2 ERSAARGLPSLARTSTLKVQASGGKKIKTDKPYGINGGMDLRDGKDASGRKPRGKGVYQF 61
Query: 74 LNQQPLN 80
+++ N
Sbjct: 62 VDKYGAN 68
>gi|224115376|ref|XP_002317016.1| predicted protein [Populus trichocarpa]
gi|118483083|gb|ABK93451.1| unknown [Populus trichocarpa]
gi|222860081|gb|EEE97628.1| predicted protein [Populus trichocarpa]
Length = 137
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 60/84 (71%), Gaps = 7/84 (8%)
Query: 2 AASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVA-KGGKIKTDKPYGVNGGMDLRE 60
+SVMASS+SLKPAPFTV+K + ++SFK+ A + K KTD+PYG+NGGMDLR
Sbjct: 3 TSSVMASSMSLKPAPFTVKKPSLP--SLSRRSSFKVEASRSRKSKTDQPYGINGGMDLRG 60
Query: 61 GLDASGRKAK----YKFLNQQPLN 80
GLDASGRK K Y+F+++ N
Sbjct: 61 GLDASGRKGKGKGVYQFVDKYGAN 84
>gi|1418984|emb|CAA99757.1| photosystem II 10 kD polypeptide [Solanum lycopersicum]
Length = 130
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 59/78 (75%), Gaps = 8/78 (10%)
Query: 10 LSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMDLREGLDASG 66
LSLKP FT+EK + +GLPSL ++S FK+VA+G K+KTDKPYG+NG M LR+G+DASG
Sbjct: 1 LSLKPT-FTLEKISVKGLPSLTRSSSSFKVVARGVKKLKTDKPYGINGSMALRDGVDASG 59
Query: 67 RKAK----YKFLNQQPLN 80
RK K Y+++++ N
Sbjct: 60 RKPKGKGVYQYVDKYGAN 77
>gi|25989650|gb|AAN60205.1| photosystem II 10 kDa protein [Xerophyta humilis]
Length = 139
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 61/87 (70%), Gaps = 8/87 (9%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKGGK-IKTDKPYGVNGGMD 57
MAAS+M SSL+LKPA E+S+ +GLPSL ++S FK+ A GGK IKT PYG GGM+
Sbjct: 1 MAASMM-SSLALKPATPVFERSSVKGLPSLVRSSSSFKVQASGGKKIKTATPYGPGGGMN 59
Query: 58 LREGLDASGRKAK----YKFLNQQPLN 80
L GLDASGRK K Y+F+++ N
Sbjct: 60 LPAGLDASGRKQKGKGVYQFVDKYGAN 86
>gi|131400|sp|P10690.1|PSBR_SPIOL RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
Flags: Precursor
gi|170127|gb|AAA34037.1| 10kd polypeptide precursor [Spinacia oleracea]
Length = 140
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 62/88 (70%), Gaps = 9/88 (10%)
Query: 1 MAASVMASSLSLKPAPFTVE-KSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGM 56
MA SVM SSLSLKP+ F V+ KSA +GLPSL+++S F + A G KIK DKP G+ GGM
Sbjct: 1 MATSVM-SSLSLKPSSFGVDTKSAVKGLPSLSRSSASFTVRASGVKKIKVDKPLGIGGGM 59
Query: 57 DLREGLDASGR----KAKYKFLNQQPLN 80
LR+G+D+SGR K Y+F+++ N
Sbjct: 60 KLRDGVDSSGRKPTGKGVYQFVDKYGAN 87
>gi|269930242|gb|ACZ54010.1| chloroplast photosystem II protein [Wolffia arrhiza]
Length = 138
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 62/87 (71%), Gaps = 9/87 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMD 57
MA+SV+ SSLSLKP+P + +S +GLPSLA+ + + A GGK IKTD P+G+ GGM
Sbjct: 1 MASSVI-SSLSLKPSPISA-RSPVKGLPSLARPASGLTVKASGGKKIKTDTPFGIGGGMK 58
Query: 58 LREGLDASGRKAK----YKFLNQQPLN 80
L++GLDASGRK K Y+F+++ N
Sbjct: 59 LKDGLDASGRKGKGKGVYQFVDKYGAN 85
>gi|283101080|gb|ADB08698.1| chloroplast photosystem II 10 kDa protein-like protein [Wolffia
arrhiza]
gi|339716046|gb|AEJ88270.1| putative chloroplast photosystem II 10 kDa protein [Wolffia
arrhiza]
Length = 138
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 61/87 (70%), Gaps = 9/87 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMD 57
M +SV+ SSLSLKP+P + +S +GLPSLA+ ++ + A GGK IKTD P+G GGM
Sbjct: 1 MTSSVI-SSLSLKPSPISA-RSPVKGLPSLARPASALTVKASGGKKIKTDTPFGTGGGMK 58
Query: 58 LREGLDASGRKAK----YKFLNQQPLN 80
L++GLDASGRK K Y+F+++ N
Sbjct: 59 LKDGLDASGRKGKGKGVYQFVDKYGAN 85
>gi|242042938|ref|XP_002459340.1| hypothetical protein SORBIDRAFT_02g002830 [Sorghum bicolor]
gi|241922717|gb|EER95861.1| hypothetical protein SORBIDRAFT_02g002830 [Sorghum bicolor]
Length = 137
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 56/85 (65%), Gaps = 6/85 (7%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDLR 59
MAASVMAS LSLKP+PF PS ++F+++AK K IKT +P+G GG++L+
Sbjct: 1 MAASVMAS-LSLKPSPFLDRSRFTSVQPSARSSTFRVMAKKTKKIKTSQPFGPAGGLNLK 59
Query: 60 EGLDASGRKAK----YKFLNQQPLN 80
+G+DASGR AK Y+F N+ N
Sbjct: 60 DGVDASGRPAKGKGVYQFANKYGAN 84
>gi|213512148|ref|NP_001134061.1| Photosystem II 10 kDa polypeptide, chloroplast [Salmo salar]
gi|209730436|gb|ACI66087.1| Photosystem II 10 kDa polypeptide, chloroplast precursor [Salmo
salar]
Length = 138
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 58/86 (67%), Gaps = 7/86 (8%)
Query: 1 MAASVMASSLSLKPAPFTV-EKSAARGLPSLAKTSFKIVA-KGGKIKTDKPYGVNGGMDL 58
M+ASVMAS L+LKP+P + E+S RG+ A+ S IVA K KI+T +PYG GG+D
Sbjct: 1 MSASVMAS-LALKPSPPPLWERSKIRGVRPSARPSLLIVASKVKKIQTAQPYGPGGGVDF 59
Query: 59 REGLDASGRKAK----YKFLNQQPLN 80
++GLDASGR AK Y+F N+ N
Sbjct: 60 KDGLDASGRVAKGKGVYQFANKYGAN 85
>gi|115470575|ref|NP_001058886.1| Os07g0147500 [Oryza sativa Japonica Group]
gi|22831113|dbj|BAC15975.1| putative photosystem II 10 kD polypeptide [Oryza sativa Japonica
Group]
gi|50509251|dbj|BAD30534.1| putative photosystem II 10 kD polypeptide [Oryza sativa Japonica
Group]
gi|113610422|dbj|BAF20800.1| Os07g0147500 [Oryza sativa Japonica Group]
gi|215692793|dbj|BAG88237.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218199086|gb|EEC81513.1| hypothetical protein OsI_24891 [Oryza sativa Indica Group]
Length = 137
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 57/86 (66%), Gaps = 7/86 (8%)
Query: 1 MAASVMASSLSLKP-APFTVEKSAARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDL 58
MAASVMAS L+LKP A +E+S RG ++A+ S IVAK K I+T +PYG GG+
Sbjct: 1 MAASVMAS-LALKPSASPLLERSKLRGKGTMARPSLIIVAKKAKKIQTSQPYGPAGGVVF 59
Query: 59 REGLDASGRKAK----YKFLNQQPLN 80
+EG+DASGR AK Y+F N+ N
Sbjct: 60 KEGVDASGRVAKGKGLYQFSNKYGAN 85
>gi|283101070|gb|ADB08693.1| chloroplast photosystem II 10 kDa protein-like protein [Wolffia
arrhiza]
gi|351066200|gb|AEQ39074.1| putative chloroplast photosystem II 10 kDa protein [Wolffia
arrhiza]
Length = 138
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 51/75 (68%), Gaps = 8/75 (10%)
Query: 13 KPAPFTVEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGRKA 69
KP+P + +S +GLPSLA+ ++ + A GGK IKTD P+G GGM L++GLDASGRK
Sbjct: 12 KPSPISA-RSPVKGLPSLARPASALTVKASGGKKIKTDTPFGTGGGMKLKDGLDASGRKG 70
Query: 70 K----YKFLNQQPLN 80
K Y+F+++ N
Sbjct: 71 KGKGVYQFVDKYGAN 85
>gi|222636433|gb|EEE66565.1| hypothetical protein OsJ_23088 [Oryza sativa Japonica Group]
Length = 137
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 56/86 (65%), Gaps = 7/86 (8%)
Query: 1 MAASVMASSLSLKP-APFTVEKSAARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDL 58
MAASVMAS L+LKP A +E+S RG ++A+ S IVAK K I+T +PYG GG+
Sbjct: 1 MAASVMAS-LALKPSASPLLERSKLRGKGTMARPSLIIVAKKAKKIQTSQPYGPAGGVVF 59
Query: 59 REGLDASGRKAK----YKFLNQQPLN 80
+EG+DASG AK Y+F N+ N
Sbjct: 60 KEGVDASGMVAKGKGLYQFSNKYGAN 85
>gi|324331732|gb|ADY38661.1| putative chloroplast photosystem II protein PsbR [Wolffia
arrhiza]
Length = 79
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 44/61 (72%), Gaps = 4/61 (6%)
Query: 13 KPAPFTVEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGRKA 69
KP+P + +S +GLPSLA+ ++ + A GGK IKTD P+G GG +L++GLDASGRK
Sbjct: 12 KPSPISA-RSPVKGLPSLARPASALTVKASGGKKIKTDTPFGTGGGTELKDGLDASGRKG 70
Query: 70 K 70
K
Sbjct: 71 K 71
>gi|99014566|emb|CAK22270.1| Photosystem II 10 kDa polypeptide, chloroplast precursor
[Chenopodium rubrum]
Length = 121
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%), Gaps = 4/55 (7%)
Query: 1 MAASVMASSLSLKPAPFTVE-KSAARGLPSLAK--TSFKIVAKGG-KIKTDKPYG 51
MAASV+ SSLSLKP+ F V+ K+A +GLPSL++ TSF + A GG KIKTDKP G
Sbjct: 1 MAASVVMSSLSLKPSSFNVDTKAAVKGLPSLSRSSTSFTVRASGGKKIKTDKPSG 55
>gi|125560490|gb|EAZ05938.1| hypothetical protein OsI_28175 [Oryza sativa Indica Group]
Length = 130
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 12/82 (14%)
Query: 6 MASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMDLREGL 62
MA+S+ P V + A+GLPS+++ +SF IV GGK IKTDKPYG+ GGM + +
Sbjct: 1 MATSMITSPL---VAPARAKGLPSISRRGSSFAIVCTGGKKIKTDKPYGIGGGMSVD--I 55
Query: 63 DASGRKAK----YKFLNQQPLN 80
DASGRK+ Y+F+++ N
Sbjct: 56 DASGRKSTGKGVYQFVDKYGAN 77
>gi|115475227|ref|NP_001061210.1| Os08g0200300 [Oryza sativa Japonica Group]
gi|38636958|dbj|BAD03219.1| putative photosystem II 10K protein [Oryza sativa Japonica Group]
gi|113623179|dbj|BAF23124.1| Os08g0200300 [Oryza sativa Japonica Group]
gi|215740428|dbj|BAG97084.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768077|dbj|BAH00306.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 130
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 12/82 (14%)
Query: 6 MASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMDLREGL 62
MA+S+ P V + A+GLPS+++ +SF IV GGK IKTDKPYG+ GGM + +
Sbjct: 1 MATSMITSP---LVAPARAKGLPSISRRGSSFAIVCSGGKKIKTDKPYGIGGGMSVD--I 55
Query: 63 DASGRKAK----YKFLNQQPLN 80
DASGRK+ Y+F+++ N
Sbjct: 56 DASGRKSTGKGVYQFVDKYGAN 77
>gi|357111682|ref|XP_003557641.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
[Brachypodium distachyon]
Length = 139
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 1 MAASVMASS-LSLKPAPFTVEKSAARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDL 58
MAASVMAS+ L P+PF + PS SF++++K K ++T +P+G GG++L
Sbjct: 1 MAASVMASTALKPSPSPFIGQPRLRAIQPSARSPSFRVMSKKAKKVQTSQPFGPGGGLEL 60
Query: 59 REGLDASGRKAKYKFLNQ 76
++G+DASGR AK K + Q
Sbjct: 61 KDGVDASGRPAKGKGVYQ 78
>gi|83317160|gb|ABC02754.1| PS II 10 kDa protein [Phyllostachys edulis]
Length = 130
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 12/82 (14%)
Query: 6 MASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMDLREGL 62
MA+S+ P + + A+G+PSL++ +SF IV GGK IKTDKPYG+ GGM + +
Sbjct: 1 MATSMITSP---LLAPTRAKGMPSLSRRGSSFAIVCGGGKKIKTDKPYGIGGGMTVD--V 55
Query: 63 DASGRKAK----YKFLNQQPLN 80
DA+GRK K Y+F+++ N
Sbjct: 56 DANGRKGKGKGVYQFVDKYGAN 77
>gi|1835731|gb|AAB46718.1| photosystem II 10 kDa polypeptide [Oryza sativa Indica Group]
Length = 126
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 47/69 (68%), Gaps = 9/69 (13%)
Query: 19 VEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGRKAK----Y 71
V + A+GLPS+++ +SF IV GGK IKTDKPYG+ GGM + +DASGRK+ Y
Sbjct: 7 VAPARAKGLPSISRRGSSFAIVCSGGKKIKTDKPYGIGGGMSVD--IDASGRKSTGKGVY 64
Query: 72 KFLNQQPLN 80
+F+++ N
Sbjct: 65 QFVDKYGAN 73
>gi|218199087|gb|EEC81514.1| hypothetical protein OsI_24892 [Oryza sativa Indica Group]
Length = 139
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 54/79 (68%), Gaps = 4/79 (5%)
Query: 1 MAASVMAS-SLSLKPAPFTVEKSAARGL-PSLAKTSFKIVAKGGK-IKTDKPYGVNGGMD 57
MA SVMAS +L P+PF +E++ R + PS + F+++AK K I+T +P+G GG++
Sbjct: 1 MATSVMASCALKPSPSPF-LEQTRIRAIQPSSRPSLFRVMAKKAKKIQTSQPFGPGGGLN 59
Query: 58 LREGLDASGRKAKYKFLNQ 76
L++G+DASGR K K + Q
Sbjct: 60 LKDGVDASGRPIKGKGVYQ 78
>gi|242078467|ref|XP_002444002.1| hypothetical protein SORBIDRAFT_07g005660 [Sorghum bicolor]
gi|241940352|gb|EES13497.1| hypothetical protein SORBIDRAFT_07g005660 [Sorghum bicolor]
Length = 132
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 55/87 (63%), Gaps = 15/87 (17%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIV-AKGGKIKTDKPYGVNGGMD 57
MAAS+++SS + P S A+GLPSL + +SF +V G KIKTDKP+G+ GG+
Sbjct: 1 MAASMISSSALVAP------PSRAQGLPSLGRRASSFAVVCGTGKKIKTDKPFGIGGGLT 54
Query: 58 LREGLDASGRKAK----YKFLNQQPLN 80
+ + DASGRK K Y+F+++ N
Sbjct: 55 VDK--DASGRKVKGKGVYQFVDKYGAN 79
>gi|222636434|gb|EEE66566.1| hypothetical protein OsJ_23089 [Oryza sativa Japonica Group]
Length = 139
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 54/79 (68%), Gaps = 4/79 (5%)
Query: 1 MAASVMAS-SLSLKPAPFTVEKSAARGL-PSLAKTSFKIVAKGGK-IKTDKPYGVNGGMD 57
MAASVMAS +L P+PF +E++ R + PS + F+++AK K I+T +P+G GG +
Sbjct: 1 MAASVMASCALKPSPSPF-LEQTRIRAIQPSSRPSLFRVMAKKAKKIQTSQPFGPGGGPN 59
Query: 58 LREGLDASGRKAKYKFLNQ 76
L++G+DASGR K K + Q
Sbjct: 60 LKDGVDASGRPIKGKGVYQ 78
>gi|104763664|gb|ABF74605.1| chloroplast photosystem II 10 kDa protein [Agave tequilana]
Length = 144
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 58/91 (63%), Gaps = 11/91 (12%)
Query: 1 MAASVMASSLS---LKPA-PFTVEKSAARGLPSLAKTSFKIVAKGG---KIKTDKPYGVN 53
MAAS A+ +S ++P+ PF + A+ LPSLA++S + + KI+T PYG+N
Sbjct: 1 MAASATATVMSSFFVRPSSPFLERSAQAKALPSLARSSSSLRVEASAKKKIQTATPYGIN 60
Query: 54 GGMDLREGLDASGRKAK----YKFLNQQPLN 80
GG+ L++G DASGRKAK Y+F+++ N
Sbjct: 61 GGLSLKDGADASGRKAKGKGVYQFVDKYGAN 91
>gi|3914470|sp|Q40070.1|PSBR_HORVU RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
Flags: Precursor
gi|1321868|emb|CAA66373.1| 10kD PSII protein [Hordeum vulgare]
gi|326521128|dbj|BAJ96767.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326532058|dbj|BAK01405.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 138
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 5/79 (6%)
Query: 1 MAASVMASSLSLKPA--PFTVEKSAARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMD 57
M+A VMAS L+LKP+ P +++S G+ A+ S IVAK K ++T +PYG GG+
Sbjct: 1 MSACVMAS-LALKPSSSPL-LQRSKLGGVRPSARPSLVIVAKKAKKVQTAQPYGPGGGVA 58
Query: 58 LREGLDASGRKAKYKFLNQ 76
+EG+DASGR AK K + Q
Sbjct: 59 FKEGVDASGRVAKGKGVYQ 77
>gi|226502122|ref|NP_001148037.1| photosystem II3 [Zea mays]
gi|195610816|gb|ACG27238.1| photosystem II 10 kDa polypeptide [Zea mays]
gi|195615454|gb|ACG29557.1| photosystem II 10 kDa polypeptide [Zea mays]
gi|195617002|gb|ACG30331.1| photosystem II 10 kDa polypeptide [Zea mays]
gi|195617342|gb|ACG30501.1| photosystem II 10 kDa polypeptide [Zea mays]
gi|195618136|gb|ACG30898.1| photosystem II 10 kDa polypeptide [Zea mays]
gi|195623906|gb|ACG33783.1| photosystem II 10 kDa polypeptide [Zea mays]
gi|413921085|gb|AFW61017.1| photosystem II polypeptide [Zea mays]
Length = 128
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 17/86 (19%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGKIKTDKPYGVNGGMDL 58
MAAS+++SS +L AP +GLP L + +SF +V KIKTDKPYG+ GG+ +
Sbjct: 1 MAASMISSS-ALAVAP--------QGLPPLGRRASSFAVVCSKKKIKTDKPYGIGGGLTV 51
Query: 59 REGLDASGRKAK----YKFLNQQPLN 80
+DA+GRK K Y+F+++ N
Sbjct: 52 D--VDANGRKGKGKGVYQFVDKYGAN 75
>gi|357111680|ref|XP_003557640.1| PREDICTED: LOW QUALITY PROTEIN: photosystem II 10 kDa
polypeptide, chloroplastic-like [Brachypodium
distachyon]
Length = 138
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Query: 1 MAASVMASSLSLKPA--PFTVEKSAARGLPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDL 58
M+ SVMAS L+LKP+ P PS+ F + K K++T +PYG +G +
Sbjct: 1 MSDSVMAS-LALKPSSSPLLERSKLQARXPSVRPPLFIVAKKAKKVQTSQPYGPSGEVVF 59
Query: 59 REGLDASGRKAK----YKFLNQQPLN 80
+EG+DASGR AK Y+F N+ N
Sbjct: 60 KEGVDASGRVAKGKGVYQFSNKYGAN 85
>gi|195619612|gb|ACG31636.1| photosystem II 10 kDa polypeptide [Zea mays]
Length = 128
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 17/86 (19%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGKIKTDKPYGVNGGMDL 58
MAAS+++SS +L AP +GLP L + +SF +V KIKTDKPYG+ G+ +
Sbjct: 1 MAASMISSS-ALAVAP--------QGLPPLGRRASSFAVVCSKKKIKTDKPYGIGXGLTV 51
Query: 59 REGLDASGRKAK----YKFLNQQPLN 80
+DA+GRK K Y F+++ N
Sbjct: 52 D--VDANGRKGKGKGVYHFVDKYGAN 75
>gi|149391015|gb|ABR25525.1| photosystem ii 10 kDa polypeptide [Oryza sativa Indica Group]
Length = 128
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 7/53 (13%)
Query: 33 TSFKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGRKAK----YKFLNQQPLN 80
+SF IV GGK IKTDKPYG+ GGM + +DASGRK+ Y+F+++ N
Sbjct: 25 SSFAIVCSGGKKIKTDKPYGIGGGMSVD--IDASGRKSTGKGVYQFVDKYGAN 75
>gi|34393640|dbj|BAC83336.1| putative Photosystem II 10 kDa polypeptide, chloroplast precursor
[Oryza sativa Japonica Group]
Length = 134
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
Query: 6 MAS-SLSLKPAPFTVEKSAARGL-PSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDLREGL 62
MAS +L P+PF +E++ R + PS + F+++AK K I+T +P+G GG +L++G+
Sbjct: 1 MASCALKPSPSPF-LEQTRIRAIQPSSRPSLFRVMAKKAKKIQTSQPFGPGGGPNLKDGV 59
Query: 63 DASGRKAKYKFLNQ 76
DASGR K K + Q
Sbjct: 60 DASGRPIKGKGVYQ 73
>gi|302780972|ref|XP_002972260.1| hypothetical protein SELMODRAFT_231914 [Selaginella
moellendorffii]
gi|300159727|gb|EFJ26346.1| hypothetical protein SELMODRAFT_231914 [Selaginella
moellendorffii]
Length = 135
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 23 AARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGRKAKYKFLNQ 76
AARGLP+L+ T + A+GGK I T P G +G + + GLDASGR K K + Q
Sbjct: 21 AARGLPALS-TRLTVTARGGKKISTKAPLGPSGDLSFKSGLDASGRGTKGKGVYQ 74
>gi|116778776|gb|ABK20990.1| unknown [Picea sitchensis]
gi|116780441|gb|ABK21682.1| unknown [Picea sitchensis]
gi|116782098|gb|ABK22369.1| unknown [Picea sitchensis]
gi|116784501|gb|ABK23366.1| unknown [Picea sitchensis]
gi|116789036|gb|ABK25094.1| unknown [Picea sitchensis]
gi|116790690|gb|ABK25703.1| unknown [Picea sitchensis]
gi|224285151|gb|ACN40303.1| unknown [Picea sitchensis]
Length = 150
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 1 MAASVMASSLSLKPAPFTVEKSA------ARGLPS------LAKTSFKIVAKGGK-IKTD 47
MA +V + S + ++EKSA +GLPS + S K+VA GGK IK D
Sbjct: 1 MAMAVAGAGCSSVVSSLSLEKSAFTAGTRVKGLPSPLLRPPTSSRSVKVVASGGKKIKVD 60
Query: 48 KPYGVNGGMDLREGLDASGRKAKYKFLNQ 76
+P G +G + R G+DA GRK K K + Q
Sbjct: 61 EPLGPSGDLTFRNGVDAGGRKPKGKGVYQ 89
>gi|224284194|gb|ACN39833.1| unknown [Picea sitchensis]
Length = 133
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 1 MAASVMASSLSLKPAPFTVEKSA------ARGLPS------LAKTSFKIVAKGGK-IKTD 47
MA +V + S + ++EKSA +GLPS + S K+VA GGK IK D
Sbjct: 1 MAMAVAGAGCSSVVSSLSLEKSAFTAGTRVKGLPSPLLRPPTSSRSVKVVASGGKKIKVD 60
Query: 48 KPYGVNGGMDLREGLDASGRKAKYKFLNQ 76
+P G +G + R G+DA GRK K K + Q
Sbjct: 61 EPLGPSGDLTFRNGVDAGGRKPKGKGVYQ 89
>gi|302804845|ref|XP_002984174.1| hypothetical protein SELMODRAFT_180828 [Selaginella
moellendorffii]
gi|300148023|gb|EFJ14684.1| hypothetical protein SELMODRAFT_180828 [Selaginella
moellendorffii]
Length = 135
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 23 AARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGRKAKYKFLNQ 76
AARGLP+L+ + A GGK I T P G +G + + G+DASGR AK K + Q
Sbjct: 21 AARGLPALS-IRLTVTASGGKKISTKTPLGPSGDLTFKSGVDASGRGAKGKGVYQ 74
>gi|222640075|gb|EEE68207.1| hypothetical protein OsJ_26372 [Oryza sativa Japonica Group]
Length = 149
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 6/44 (13%)
Query: 41 GGKIKTDKPYGVNGGMDLREGLDASGRKAK----YKFLNQQPLN 80
G KIKTDKPYG+ GGM + +DASGRK+ Y+F+++ N
Sbjct: 55 GKKIKTDKPYGIGGGMSVD--IDASGRKSTGKGVYQFVDKYGAN 96
>gi|357145089|ref|XP_003573520.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
isoform 1 [Brachypodium distachyon]
gi|357145092|ref|XP_003573521.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
isoform 2 [Brachypodium distachyon]
gi|357145094|ref|XP_003573522.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
isoform 3 [Brachypodium distachyon]
Length = 127
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 20/87 (22%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMD 57
MAAS++ S L A LPSL++ ++F +V GGK IK DKP G+ GG+
Sbjct: 1 MAASMITSPLV-----------APTSLPSLSRRGSNFAVVCSGGKKIKVDKPLGIGGGLT 49
Query: 58 LREGLDASGRKAK----YKFLNQQPLN 80
+ +DA+GRK Y+F+++ N
Sbjct: 50 VD--IDANGRKGTGKGVYQFVDKYGAN 74
>gi|326495290|dbj|BAJ85741.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510039|dbj|BAJ87236.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 127
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%), Gaps = 9/61 (14%)
Query: 27 LPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGRKAK----YKFLNQQPL 79
LPSL++ +SF +V GGK IK DKP G+ GG+ + +DA+GRK Y+F+++
Sbjct: 16 LPSLSRRGSSFAVVCSGGKKIKVDKPLGLGGGLTVD--IDANGRKVGKKGVYQFVDKYGA 73
Query: 80 N 80
N
Sbjct: 74 N 74
>gi|383163010|gb|AFG64206.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
Length = 95
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 28 PSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLREGLDASGRKAKYKFL 74
P + S K+VA G KIK D+P G +G + R G+DA GRK F+
Sbjct: 43 PPTSNRSVKVVASGVKKIKVDQPLGPSGDLTFRNGVDAGGRKPTVFFV 90
>gi|383162988|gb|AFG64195.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383162990|gb|AFG64196.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383162992|gb|AFG64197.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383162994|gb|AFG64198.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383162996|gb|AFG64199.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383162998|gb|AFG64200.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163000|gb|AFG64201.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163002|gb|AFG64202.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163004|gb|AFG64203.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163006|gb|AFG64204.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163008|gb|AFG64205.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163012|gb|AFG64207.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163014|gb|AFG64208.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163016|gb|AFG64209.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163018|gb|AFG64210.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163020|gb|AFG64211.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163022|gb|AFG64212.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
Length = 95
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 28 PSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLREGLDASGRKAKYKFL 74
P + S K+VA G KIK D+P G +G + R G+DA GRK F+
Sbjct: 43 PPTSNRSVKVVASGVKKIKVDQPLGPSGDLTFRNGVDAGGRKPTVFFV 90
>gi|361069671|gb|AEW09147.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
Length = 95
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 28 PSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLREGLDASGRKAKYKFLN 75
P + S K+VA G KIK D+P G +G + R G+DA GRK F+
Sbjct: 43 PPTSNRSVKVVASGVKKIKVDQPLGPSGDLTFRSGVDAGGRKPTVFFVR 91
>gi|358448699|ref|ZP_09159199.1| hypothetical protein KYE_05426 [Marinobacter manganoxydans MnI7-9]
gi|357227076|gb|EHJ05541.1| hypothetical protein KYE_05426 [Marinobacter manganoxydans MnI7-9]
Length = 818
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 22 SAARGLPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASGRKAKYKFLN 75
+ AR LP L SF+++ G ++ D VN +D RE S RKAKY L+
Sbjct: 388 APARRLPGLLPASFRLIDTKGSLRED--LAVNRSLDQREIARESVRKAKYTSLS 439
>gi|385331364|ref|YP_005885315.1| hypothetical protein HP15_1623 [Marinobacter adhaerens HP15]
gi|311694514|gb|ADP97387.1| conserved hypothetical protein [Marinobacter adhaerens HP15]
Length = 818
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 22 SAARGLPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASGRKAKYKFLN 75
+ AR LP L SF+++ G ++ D VN +D RE S RKAKY L+
Sbjct: 388 APARRLPGLLPASFRLIDTKGSLRED--LAVNRSLDQREIARESVRKAKYTSLS 439
>gi|394989134|ref|ZP_10381968.1| hypothetical protein SCD_01552 [Sulfuricella denitrificans skB26]
gi|393791553|dbj|GAB71607.1| hypothetical protein SCD_01552 [Sulfuricella denitrificans skB26]
Length = 258
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 40 KGGKIKTDKPYGVNGGMDLREGLDASGRKAKYKFLN 75
+ G++ KPY + G +D R+G + GR +YKFL+
Sbjct: 125 RNGEVDEFKPYKIRGVLDKRDGFEEKGRGERYKFLS 160
>gi|389608837|dbj|BAM18030.1| prophenoloxidase [Papilio xuthus]
Length = 690
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 28 PSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASGRK---AKYKFLNQQPL 79
P + TS IV+ GG+ T Y ++ +DL GLD S R A++ LN +P
Sbjct: 432 PGVQVTSAMIVSNGGQANTLNTYWMSSDVDLSRGLDFSDRGPVFARFTHLNHRPF 486
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.135 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,440,746,768
Number of Sequences: 23463169
Number of extensions: 55385141
Number of successful extensions: 113471
Number of sequences better than 100.0: 82
Number of HSP's better than 100.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 113335
Number of HSP's gapped (non-prelim): 82
length of query: 97
length of database: 8,064,228,071
effective HSP length: 66
effective length of query: 31
effective length of database: 6,515,658,917
effective search space: 201985426427
effective search space used: 201985426427
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)