Query 034359
Match_columns 97
No_of_seqs 50 out of 52
Neff 2.3
Searched_HMMs 13730
Date Mon Mar 25 21:47:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034359.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/034359hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wu7a1 c.51.1.1 (A:330-426) H 60.1 0.68 4.9E-05 27.5 -0.5 30 61-92 34-63 (97)
2 d1qf6a1 c.51.1.1 (A:533-642) T 37.3 2.8 0.0002 25.2 -0.4 32 61-94 38-69 (110)
3 d1nyra1 c.51.1.1 (A:533-645) T 37.1 2.3 0.00017 25.6 -0.7 31 61-93 45-75 (113)
4 d1h4vb1 c.51.1.1 (B:326-421) H 36.4 2.9 0.00021 24.4 -0.4 30 61-92 33-62 (96)
5 d1d5ra1 b.7.1.1 (A:188-351) Pt 36.1 19 0.0014 22.9 3.7 40 13-52 2-45 (141)
6 d1kmma1 c.51.1.1 (A:326-424) H 26.9 4.1 0.0003 23.7 -0.9 30 61-92 36-65 (99)
7 d1qe0a1 c.51.1.1 (A:326-420) H 25.0 5.9 0.00043 22.8 -0.4 30 61-92 35-64 (95)
8 d1wota_ d.218.1.5 (A:) Unnamed 21.8 6.4 0.00047 23.5 -0.7 16 77-92 19-34 (98)
9 d1wdka1 a.100.1.3 (A:497-620) 18.7 12 0.00087 23.1 0.1 14 65-79 85-98 (124)
10 d1soua_ c.124.1.6 (A:) Hypothe 17.9 13 0.00097 24.2 0.2 15 62-76 122-137 (194)
No 1
>d1wu7a1 c.51.1.1 (A:330-426) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=60.07 E-value=0.68 Score=27.50 Aligned_cols=30 Identities=27% Similarity=0.296 Sum_probs=24.0
Q ss_pred CcCcCCCcccceeeEecccccCceeEEEeccc
Q 034359 61 GLDASGRKAKYKFLNQQPLNSGELFVYIFGER 92 (97)
Q Consensus 61 gvDAsGRk~KGkGVYqf~dKYGan~~~~~~~~ 92 (97)
-+|.++|+.+- -++++++-|+.|+.|+|++
T Consensus 34 ~~d~~~~~l~k--q~~~A~~~~~~~~iiiG~~ 63 (97)
T d1wu7a1 34 TVEIMERGLSA--QLKYASAIGADFAVIFGER 63 (97)
T ss_dssp EECCSCCCHHH--HHHHHHHTTCSEEEEEEHH
T ss_pred EEECCCCcHHH--HHHHHHhcCCCeEEecCCc
Confidence 46777775443 4789999999999999986
No 2
>d1qf6a1 c.51.1.1 (A:533-642) Threonyl-tRNA synthetase (ThrRS), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=37.34 E-value=2.8 Score=25.15 Aligned_cols=32 Identities=13% Similarity=0.218 Sum_probs=24.9
Q ss_pred CcCcCCCcccceeeEecccccCceeEEEecccee
Q 034359 61 GLDASGRKAKYKFLNQQPLNSGELFVYIFGERCL 94 (97)
Q Consensus 61 gvDAsGRk~KGkGVYqf~dKYGan~~~~~~~~~~ 94 (97)
-+|.++++.+-| ++.+++-|+.|+.|.|++-+
T Consensus 38 ~~d~~~~~l~~k--i~~a~~~g~p~~iiiG~~E~ 69 (110)
T d1qf6a1 38 KADLRNEKIGFK--IREHTLRRVPYMLVCGDKEV 69 (110)
T ss_dssp EEECCSSCHHHH--HHHHHHTTCSEEEEECTTTG
T ss_pred cccCCccchhHH--HHHHHHcCCCEEEEECchHH
Confidence 467666655443 88999999999999998743
No 3
>d1nyra1 c.51.1.1 (A:533-645) Threonyl-tRNA synthetase (ThrRS), C-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=37.12 E-value=2.3 Score=25.62 Aligned_cols=31 Identities=16% Similarity=0.289 Sum_probs=25.2
Q ss_pred CcCcCCCcccceeeEecccccCceeEEEeccce
Q 034359 61 GLDASGRKAKYKFLNQQPLNSGELFVYIFGERC 93 (97)
Q Consensus 61 gvDAsGRk~KGkGVYqf~dKYGan~~~~~~~~~ 93 (97)
-+|.++++.+.| ++.+++-|..|+.|.|++-
T Consensus 45 ~~D~~~~~~g~k--~~~a~~~g~p~~iiiG~~E 75 (113)
T d1nyra1 45 SIDDRNEKMGYK--IREAQMQKIPYQIVVGDKE 75 (113)
T ss_dssp EECCSSCCHHHH--HHHHHHHTCSEEEEECHHH
T ss_pred eecccccccchH--HHHHHHhCceEEEEEcccc
Confidence 567777766444 8899999999999999874
No 4
>d1h4vb1 c.51.1.1 (B:326-421) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=36.45 E-value=2.9 Score=24.43 Aligned_cols=30 Identities=23% Similarity=0.268 Sum_probs=23.8
Q ss_pred CcCcCCCcccceeeEecccccCceeEEEeccc
Q 034359 61 GLDASGRKAKYKFLNQQPLNSGELFVYIFGER 92 (97)
Q Consensus 61 gvDAsGRk~KGkGVYqf~dKYGan~~~~~~~~ 92 (97)
-+|.++++- +--++++++-|+.|+.|.|++
T Consensus 33 ~~~~~~~~l--~kq~k~A~~~~~~~~iiiG~~ 62 (96)
T d1h4vb1 33 EYALAPRKP--AKGLEEALKRGAAFAGFLGED 62 (96)
T ss_dssp EECSSCCCH--HHHHHHHHHTTCSEEEEECHH
T ss_pred EEECCCCCH--HHHHHHHHHcCCCEEEEecch
Confidence 567777654 345899999999999999975
No 5
>d1d5ra1 b.7.1.1 (A:188-351) Pten tumor suppressor (Phoshphoinositide phosphatase), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.14 E-value=19 Score=22.89 Aligned_cols=40 Identities=15% Similarity=0.232 Sum_probs=28.2
Q ss_pred ccCccccccccccCCCCCc----cceeEEEEcCeeeeeeccccc
Q 034359 13 KPAPFTVEKSAARGLPSLA----KTSFKIVAKGGKIKTDKPYGV 52 (97)
Q Consensus 13 kPs~ft~~ks~vrgLpsla----Rssf~VvAsg~KIkt~kP~G~ 52 (97)
+|.+..+..-.++++|... |+-|+|...+.||-|++++..
T Consensus 2 ~P~~L~L~~I~l~~vP~f~~ggCrP~~~I~~~~~~v~ts~~~~~ 45 (141)
T d1d5ra1 2 RPVALLFHKMMFETIPMFSGGTCNPQFVVCQLKVKIYSSNSGPT 45 (141)
T ss_dssp CCCEEEEEEEEESSCCCSBTTBCCEEEEEEETTEEEEECCSSCS
T ss_pred CCEeEEEEEEEEECCCccCCCeeEEEEEEEcCCeEEEecCcEeE
Confidence 5666556666677777764 577888877779999887644
No 6
>d1kmma1 c.51.1.1 (A:326-424) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=26.86 E-value=4.1 Score=23.75 Aligned_cols=30 Identities=17% Similarity=0.127 Sum_probs=22.3
Q ss_pred CcCcCCCcccceeeEecccccCceeEEEeccc
Q 034359 61 GLDASGRKAKYKFLNQQPLNSGELFVYIFGER 92 (97)
Q Consensus 61 gvDAsGRk~KGkGVYqf~dKYGan~~~~~~~~ 92 (97)
-+|-++++-+- -++.+++.|+.|+.|.|++
T Consensus 36 ~~~~~~~~l~k--q~k~A~~~~~~~~iiiG~~ 65 (99)
T d1kmma1 36 MTNHGGGNFKK--QFARADKWGARVAVVLGES 65 (99)
T ss_dssp EECCSCCCHHH--HHHHHHHHTCSEEEECCHH
T ss_pred EEeCCCCCHHH--HHHHHHHhCCChhhhcCch
Confidence 45556654433 4788999999999999974
No 7
>d1qe0a1 c.51.1.1 (A:326-420) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=24.99 E-value=5.9 Score=22.76 Aligned_cols=30 Identities=27% Similarity=0.258 Sum_probs=22.2
Q ss_pred CcCcCCCcccceeeEecccccCceeEEEeccc
Q 034359 61 GLDASGRKAKYKFLNQQPLNSGELFVYIFGER 92 (97)
Q Consensus 61 gvDAsGRk~KGkGVYqf~dKYGan~~~~~~~~ 92 (97)
-+|-++++. +--++.+++-|+.|+.|.|+.
T Consensus 35 ~~d~~~~~l--~kq~~~A~~~~~~~~iiiG~~ 64 (95)
T d1qe0a1 35 DKDYLQRKI--KGQMKQADRLGAKFTIVIGDQ 64 (95)
T ss_dssp EECCSCCCH--HHHHHHHHHTTCSEEEEECHH
T ss_pred EecCCCCCH--HHHHHHHHhcCCCEEEEEccc
Confidence 355555443 345889999999999999974
No 8
>d1wota_ d.218.1.5 (A:) Unnamed putative nucleotidyltransferase {Thermus thermophilus [TaxId: 274]}
Probab=21.79 E-value=6.4 Score=23.52 Aligned_cols=16 Identities=25% Similarity=0.333 Sum_probs=13.1
Q ss_pred cccccCceeEEEeccc
Q 034359 77 QPLNSGELFVYIFGER 92 (97)
Q Consensus 77 f~dKYGan~~~~~~~~ 92 (97)
.+.|||...+|+||.+
T Consensus 19 i~~k~~v~~v~lFGS~ 34 (98)
T d1wota_ 19 LCARHGAVRVRVFGSV 34 (98)
T ss_dssp HHHHHTCSSCEECSHH
T ss_pred HHHHcCCcEEEEECCc
Confidence 3568999999999964
No 9
>d1wdka1 a.100.1.3 (A:497-620) Fatty oxidation complex alpha subunit, C-terminal domain {Pseudomonas fragi [TaxId: 296]}
Probab=18.73 E-value=12 Score=23.06 Aligned_cols=14 Identities=21% Similarity=0.000 Sum_probs=10.1
Q ss_pred CCCcccceeeEeccc
Q 034359 65 SGRKAKYKFLNQQPL 79 (97)
Q Consensus 65 sGRk~KGkGVYqf~d 79 (97)
-|||. |+|-|.|.+
T Consensus 85 lG~Kt-g~GFY~y~~ 98 (124)
T d1wdka1 85 LGQKN-GKGFYAYEA 98 (124)
T ss_dssp CBTTT-TBSSSEEC-
T ss_pred ccccC-CcEeeEcCC
Confidence 36664 999999975
No 10
>d1soua_ c.124.1.6 (A:) Hypothetical protein aq_1731 {Aquifex aeolicus [TaxId: 63363]}
Probab=17.95 E-value=13 Score=24.23 Aligned_cols=15 Identities=20% Similarity=-0.108 Sum_probs=11.4
Q ss_pred cCcC-CCcccceeeEe
Q 034359 62 LDAS-GRKAKYKFLNQ 76 (97)
Q Consensus 62 vDAs-GRk~KGkGVYq 76 (97)
+|.+ .|-|.|+|-|.
T Consensus 122 fD~~G~RlG~G~GyYD 137 (194)
T d1soua_ 122 FDLEGYRLGFGKGYYD 137 (194)
T ss_dssp BCSSSCBCCSCCSSHH
T ss_pred HhhcCCccccCCEeHH
Confidence 3444 58999999995
Done!