BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034367
(96 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FVC1|SVP_ARATH MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1
Length = 240
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 74/88 (84%), Positives = 85/88 (96%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
MAREKIQI+KIDNATARQVTFSKRRRG+FKKAEELSVLCDADVALIIFS+TGKLFE+ SS
Sbjct: 1 MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSS 60
Query: 61 SMKEILEKHRVHSKNLERVDQPSVELQV 88
SMKE+LE+H + SKNLE++DQPS+ELQ+
Sbjct: 61 SMKEVLERHNLQSKNLEKLDQPSLELQL 88
>sp|Q9FUY6|JOIN_SOLLC MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1
Length = 265
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 75/88 (85%), Positives = 86/88 (97%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
MAREKIQIKKIDN+TARQVTFSKRRRG+FKKAEELSVLCDADVALIIFS+TGKLF+YSSS
Sbjct: 1 MAREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSS 60
Query: 61 SMKEILEKHRVHSKNLERVDQPSVELQV 88
SMK+ILE+ +HSKNLE++DQPS+ELQ+
Sbjct: 61 SMKQILERRDLHSKNLEKLDQPSLELQL 88
>sp|O82794|AGL24_ARATH MADS-box protein AGL24 OS=Arabidopsis thaliana GN=AGL24 PE=1 SV=1
Length = 220
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/97 (67%), Positives = 80/97 (82%), Gaps = 1/97 (1%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
MAREKI+IKKIDN TARQVTFSKRRRGIFKKA+ELSVLCDADVALIIFSATGKLFE+SSS
Sbjct: 1 MAREKIRIKKIDNITARQVTFSKRRRGIFKKADELSVLCDADVALIIFSATGKLFEFSSS 60
Query: 61 SMKEILEKHRVHSKNLERV-DQPSVELQVSGLGFAYF 96
M++IL ++ +H+ N+ ++ D PS L++ +
Sbjct: 61 RMRDILGRYSLHASNINKLMDPPSTHLRLENCNLSRL 97
>sp|Q9XJ66|MAD22_ORYSJ MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica
GN=MADS22 PE=2 SV=1
Length = 228
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/96 (62%), Positives = 80/96 (83%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
MARE+ +IK+I++A ARQVTFSKRRRG+FKKAEELSVLCDADVALI+FS+TGKL ++SS
Sbjct: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
Query: 61 SMKEILEKHRVHSKNLERVDQPSVELQVSGLGFAYF 96
SM EI++K+ HS NL + +QPS++L + +A+
Sbjct: 61 SMNEIIDKYNTHSNNLGKAEQPSLDLNLEHSKYAHL 96
>sp|Q5K4R0|MAD47_ORYSJ MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica
GN=MADS47 PE=1 SV=2
Length = 246
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 74/85 (87%)
Query: 3 REKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSM 62
RE+I I++IDN ARQVTFSKRRRG+FKKAEELS+LCDA+V L++FSATGKLF+++S+SM
Sbjct: 22 RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTSM 81
Query: 63 KEILEKHRVHSKNLERVDQPSVELQ 87
++I++++ HSK L+R + ++LQ
Sbjct: 82 EQIIDRYNSHSKTLQRAEPSQLDLQ 106
>sp|Q69TG5|MAD55_ORYSJ MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica
GN=MADS55 PE=2 SV=2
Length = 245
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 67/75 (89%), Gaps = 1/75 (1%)
Query: 13 NATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVH 72
+A ARQVTFSKRRRG+FKKAEEL+VLCDADVAL++FS+TGKL +++SS+M EI++K+ H
Sbjct: 13 SAAARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFASSNMNEIIDKYTTH 72
Query: 73 SKNLERVD-QPSVEL 86
SKNL + D QPS++L
Sbjct: 73 SKNLGKTDKQPSIDL 87
>sp|Q6EP49|MAD27_ORYSJ MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica
GN=MADS27 PE=2 SV=2
Length = 240
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 70/87 (80%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R KI I++IDN+T+RQVTFSKRR GIFKKA+EL++LCDA+V L+IFS+TG+L+EYSS+
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSST 60
Query: 61 SMKEILEKHRVHSKNLERVDQPSVELQ 87
SMK +++++ + V P+ EL+
Sbjct: 61 SMKSVIDRYGKSKDEQQAVANPNSELK 87
>sp|Q6VAM4|MAD23_ORYSJ MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica
GN=MADS23 PE=2 SV=1
Length = 159
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 62/69 (89%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R KI+IK+IDNAT+RQVTFSKRR G+FKKA ELS+LCDA+V L++FS+T +L++++SS
Sbjct: 1 MGRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASS 60
Query: 61 SMKEILEKH 69
SMK I+E++
Sbjct: 61 SMKSIIERY 69
>sp|Q38847|AGL15_ARATH Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana
GN=AGL15 PE=1 SV=1
Length = 268
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 60/72 (83%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R KI+IK+I+NA +RQVTFSKRR G+ KKA ELSVLCDA+VA+I+FS +GKLFEYSS+
Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSST 60
Query: 61 SMKEILEKHRVH 72
MK+ L ++ H
Sbjct: 61 GMKQTLSRYGNH 72
>sp|A2RVQ5|AGL16_ARATH Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana
GN=AGL16 PE=1 SV=1
Length = 240
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 68/87 (78%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R KI IK+I+N+T+RQVTFSKRR G+ KKA+EL++LCDA+V +IIFS+TG+L+++SSS
Sbjct: 1 MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60
Query: 61 SMKEILEKHRVHSKNLERVDQPSVELQ 87
SMK ++E++ + P+ E+Q
Sbjct: 61 SMKSVIERYSDAKGETSSENDPASEIQ 87
>sp|Q9XGJ4|GGM13_GNEGN MADS-box protein GGM13 OS=Gnetum gnemon GN=GGM13 PE=2 SV=1
Length = 237
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 62/72 (86%), Gaps = 2/72 (2%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYS-- 58
M R KI+IK+I+N T RQVTFSKRR G+ KKA ELSVLCDA++ LIIFS++GKLFEYS
Sbjct: 1 MGRGKIEIKRIENTTNRQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEYSSA 60
Query: 59 SSSMKEILEKHR 70
SSSMK+I+E+++
Sbjct: 61 SSSMKKIIERYQ 72
>sp|Q6Z6W2|MAD57_ORYSJ MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica
GN=MADS57 PE=2 SV=2
Length = 241
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 62/69 (89%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R KI I++IDN+T+RQVTFSKRR G+ KKA+ELS+LCDA+V L++FS+TG+L+E+SS+
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSST 60
Query: 61 SMKEILEKH 69
+MK +++++
Sbjct: 61 NMKTVIDRY 69
>sp|Q84NC5|MAD25_ORYSJ MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica
GN=MADS25 PE=2 SV=2
Length = 227
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 58/70 (82%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R KI IK+IDN RQVTFSKRR G+ KKA EL++LCDADV LI+FS TG+L+++SSS
Sbjct: 1 MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDFSSS 60
Query: 61 SMKEILEKHR 70
SMK I+E+++
Sbjct: 61 SMKSIIERYQ 70
>sp|Q9SI38|ANR1_ARATH MADS-box transcription factor ANR1 OS=Arabidopsis thaliana
GN=ANR1 PE=1 SV=1
Length = 234
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 62/70 (88%), Gaps = 1/70 (1%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEY-SS 59
M R KI I++IDN+T+RQVTFSKRR G+ KKA+ELS+LCDA+V +IIFS+TGKL++Y S+
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELSILCDAEVGVIIFSSTGKLYDYASN 60
Query: 60 SSMKEILEKH 69
SSMK I+E++
Sbjct: 61 SSMKTIIERY 70
>sp|O64645|SOC1_ARATH MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1
Length = 214
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 64/75 (85%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R K Q+K+I+NAT+RQVTFSKRR G+ KKA ELSVLCDA+V+LIIFS GKL+E++SS
Sbjct: 1 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS 60
Query: 61 SMKEILEKHRVHSKN 75
+M++ ++++ H+K+
Sbjct: 61 NMQDTIDRYLRHTKD 75
>sp|Q39295|AGL15_BRANA Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15
PE=3 SV=1
Length = 264
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 58/66 (87%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R KI+IK+I+NA +RQVTFSKRR G+ KKA ELSVLCDA+VA+I+FS +GKLFE+SS+
Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEFSST 60
Query: 61 SMKEIL 66
SMK+ L
Sbjct: 61 SMKKTL 66
>sp|Q9SZJ6|AGL21_ARATH Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana
GN=AGL21 PE=1 SV=1
Length = 228
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 63/69 (91%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R KI I++ID++T+RQVTFSKRR+G+ KKA+EL++LCDA+V LIIFS+TGKL++++SS
Sbjct: 1 MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASS 60
Query: 61 SMKEILEKH 69
SMK +++++
Sbjct: 61 SMKSVIDRY 69
>sp|Q9XJ60|MAD50_ORYSJ MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica
GN=MADS50 PE=2 SV=1
Length = 230
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 62/74 (83%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R K Q+K+I+N T+RQVTFSKRR G+ KKA ELSVLCDA+VALI+FS GKL+E++S+
Sbjct: 1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASA 60
Query: 61 SMKEILEKHRVHSK 74
S ++ +E++R ++K
Sbjct: 61 STQKTIERYRTYTK 74
>sp|Q0D4T4|MAD18_ORYSJ MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica
GN=MADS18 PE=1 SV=1
Length = 249
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSS- 59
M R +Q+++I+N RQVTFSKRR G+ KKA E+SVLCDADVALI+FS GKL+E+SS
Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSH 60
Query: 60 SSMKEILEKHRVHSKNLERVDQPSVELQ 87
SSM+ ILE+++ +S + V +P+ E Q
Sbjct: 61 SSMEGILERYQRYSFDERAVLEPNTEDQ 88
>sp|A2YNI2|MAD18_ORYSI MADS-box transcription factor 18 OS=Oryza sativa subsp. indica
GN=MADS18 PE=2 SV=2
Length = 249
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSS- 59
M R +Q+++I+N RQVTFSKRR G+ KKA E+SVLCDADVALI+FS GKL+E+SS
Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSH 60
Query: 60 SSMKEILEKHRVHSKNLERVDQPSVELQ 87
SSM+ ILE+++ +S + V +P+ E Q
Sbjct: 61 SSMEGILERYQRYSFDERAVLEPNTEDQ 88
>sp|Q40704|MADS3_ORYSJ MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica
GN=MADS3 PE=2 SV=1
Length = 236
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 59/70 (84%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R KI+IK+I+N T RQVTF KRR G+ KKA ELSVLCDA+VALI+FS+ G+L+EY+++
Sbjct: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 60
Query: 61 SMKEILEKHR 70
S+K +E+++
Sbjct: 61 SVKSTVERYK 70
>sp|Q9M2K8|AGL18_ARATH Agamous-like MADS-box protein AGL18 OS=Arabidopsis thaliana
GN=AGL18 PE=2 SV=1
Length = 256
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 60/69 (86%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R +I+IKKI+N +RQVTFSKRR G+ KKA+ELS+LCDA+VALIIFS+TGK++++SS
Sbjct: 1 MGRGRIEIKKIENINSRQVTFSKRRNGLIKKAKELSILCDAEVALIIFSSTGKIYDFSSV 60
Query: 61 SMKEILEKH 69
M++IL ++
Sbjct: 61 CMEQILSRY 69
>sp|Q2V0P1|MAD58_ORYSJ MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica
GN=MADS58 PE=2 SV=1
Length = 272
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 60/69 (86%)
Query: 2 AREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSS 61
+R KI+IK+I+N T RQVTF KRR G+ KKA ELSVLCDA+VAL++FS+ G+L+EYS++S
Sbjct: 44 SRGKIEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 103
Query: 62 MKEILEKHR 70
+KE +E+++
Sbjct: 104 VKETIERYK 112
>sp|Q8GTF4|AP1C_BRAOB Floral homeotic protein APETALA 1 C OS=Brassica oleracea var.
botrytis GN=AP1C PE=2 SV=1
Length = 256
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R ++Q+K+I+N RQVTFSKRR G+FKKA E+SVLCDA+VAL++FS GKLFEYS+
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 S-MKEILEKHRVHS 73
S M++ILE++ +S
Sbjct: 61 SCMEKILERYERYS 74
>sp|B4YPV4|AP1C_BRAOA Floral homeotic protein APETALA 1 C OS=Brassica oleracea var.
alboglabra GN=AP1C PE=3 SV=1
Length = 256
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R ++Q+K+I+N RQVTFSKRR G+FKKA E+SVLCDA+VAL++FS GKLFEYS+
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 S-MKEILEKHRVHS 73
S M++ILE++ +S
Sbjct: 61 SCMEKILERYERYS 74
>sp|Q96355|1AP1_BRAOT Floral homeotic protein APETALA 1-1 OS=Brassica oleracea var.
italica GN=1AP1 PE=2 SV=1
Length = 256
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R ++Q+K+I+N RQVTFSKRR G+FKKA E+SVLCDA+VAL++FS GKLFEYS+
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 S-MKEILEKHRVHS 73
S M++ILE++ +S
Sbjct: 61 SCMEKILERYERYS 74
>sp|P0DI14|AP1_BRARP Floral homeotic protein APETALA 1 OS=Brassica rapa subsp.
pekinensis GN=AP1 PE=3 SV=1
Length = 256
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R ++Q+K+I+N RQVTFSKRR G+FKKA E+SVLCDA+VAL++FS GKLFEYS+
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 S-MKEILEKHRVHS 73
S M++ILE++ +S
Sbjct: 61 SCMEKILERYERYS 74
>sp|Q8VWM8|M17_MAIZE MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1
Length = 259
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 63/77 (81%), Gaps = 3/77 (3%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R KI+IK+I+N+T RQVTFSKRR G+ KKA EL+VLCDA V ++IFS+TGK+FEY S
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSP 60
Query: 61 --SMKEILEKHRVHSKN 75
S++E++E+++ H+ N
Sbjct: 61 ACSLRELIEQYQ-HATN 76
>sp|Q6H711|MAD29_ORYSJ MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica
GN=MADS29 PE=2 SV=1
Length = 260
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 59/73 (80%), Gaps = 2/73 (2%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R KI+IK+I+NAT RQVTFSKRR G+ KKA EL+VLCDA V ++IFS+TGK+FEY S
Sbjct: 1 MGRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSP 60
Query: 61 --SMKEILEKHRV 71
S++E++E ++
Sbjct: 61 TCSLRELIEHYQT 73
>sp|P17839|AG_ARATH Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG
PE=1 SV=2
Length = 252
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 58/69 (84%)
Query: 2 AREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSS 61
R KI+IK+I+N T RQVTF KRR G+ KKA ELSVLCDA+VALI+FS+ G+L+EYS++S
Sbjct: 18 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNS 77
Query: 62 MKEILEKHR 70
+K +E+++
Sbjct: 78 VKGTIERYK 86
>sp|Q01540|AG_BRANA Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2
SV=1
Length = 252
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 58/69 (84%)
Query: 2 AREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSS 61
R KI+IK+I+N T RQVTF KRR G+ KKA ELSVLCDA+VALI+FS+ G+L+EYS++S
Sbjct: 18 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNS 77
Query: 62 MKEILEKHR 70
+K +E+++
Sbjct: 78 VKGTIERYK 86
>sp|Q40702|MADS2_ORYSJ MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica
GN=MADS2 PE=2 SV=1
Length = 209
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 61/75 (81%), Gaps = 2/75 (2%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSS- 59
M R KI+IK+I+N+T RQVTFSKRR GI KKA E+SVLCDA+V ++IFS+ GKL++Y S
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSP 60
Query: 60 -SSMKEILEKHRVHS 73
+S+ ILEK++ +S
Sbjct: 61 KTSLSRILEKYQTNS 75
>sp|Q39371|3AP1_BRAOL Floral homeotic protein APETALA 1 OS=Brassica oleracea GN=AP1
PE=2 SV=1
Length = 256
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R ++Q+K+I+N RQVTFSKRR G+FKKA E+SVLCDA+VAL++FS GKLFEYS+
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 S-MKEILEKHRVHS 73
M++ILE++ +S
Sbjct: 61 PCMEKILERYERYS 74
>sp|Q40885|AG_PETHY Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=1
SV=1
Length = 242
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 59/70 (84%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
+ R KI+IK+I+N T RQVTF KRR G+ KKA ELSVLCDA+VALI+FS+ G+L+EY+++
Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 76
Query: 61 SMKEILEKHR 70
S+K +E+++
Sbjct: 77 SVKATIERYK 86
>sp|Q43585|AG_TOBAC Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2
SV=1
Length = 248
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 59/70 (84%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
+ R KI+IK+I+N T RQVTF KRR G+ KKA ELSVLCDA+VALI+FS+ G+L+EY+++
Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 76
Query: 61 SMKEILEKHR 70
S+K +E+++
Sbjct: 77 SVKATIERYK 86
>sp|Q41274|AGL8_SINAL Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba
GN=AGL8 PE=2 SV=1
Length = 241
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 59/70 (84%), Gaps = 1/70 (1%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R ++Q+K+I+N RQVTFSKRR G+ KKA E+SVLCDA+VAL+IFS+ GKLFEYS+
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTD 60
Query: 61 S-MKEILEKH 69
S M++ILE++
Sbjct: 61 SCMEKILERY 70
>sp|Q10PZ9|MADS1_ORYSJ MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica
GN=MADS1 PE=1 SV=1
Length = 257
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R K+++K+I+N +RQVTF+KRR G+ KKA ELS+LCDA+VALIIFS G+LFE+SSS
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 60
Query: 61 S-MKEILEKHRVHSKNLERVDQPSVEL 86
S M + LE++R + N + P E+
Sbjct: 61 SCMYKTLERYRSCNYNSQDAAAPENEI 87
>sp|A2XDY1|MADS1_ORYSI MADS-box transcription factor 1 OS=Oryza sativa subsp. indica
GN=MADS1 PE=2 SV=2
Length = 257
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R K+++K+I+N +RQVTF+KRR G+ KKA ELS+LCDA+VALIIFS G+LFE+SSS
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 60
Query: 61 S-MKEILEKHRVHSKNLERVDQPSVEL 86
S M + LE++R + N + P E+
Sbjct: 61 SCMYKTLERYRSCNYNSQDAAAPENEI 87
>sp|Q0DEB8|MADS5_ORYSJ MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica
GN=MADS5 PE=1 SV=1
Length = 225
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R K+++K+I+N +RQVTF+KRR G+ KKA ELSVLCDA+VALIIFS G+LFE+S+S
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTS 60
Query: 61 S-MKEILEKHRVHSKNLERVD 80
S M + LE++R + NL +
Sbjct: 61 SCMYKTLERYRSCNYNLNSCE 81
>sp|A2Y9P0|MADS5_ORYSI MADS-box transcription factor 5 OS=Oryza sativa subsp. indica
GN=MADS5 PE=2 SV=1
Length = 225
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R K+++K+I+N +RQVTF+KRR G+ KKA ELSVLCDA+VALIIFS G+LFE+S+S
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTS 60
Query: 61 S-MKEILEKHRVHSKNLERVD 80
S M + LE++R + NL +
Sbjct: 61 SCMYKTLERYRSCNYNLNSCE 81
>sp|Q10CQ1|MAD14_ORYSJ MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica
GN=MADS14 PE=1 SV=2
Length = 246
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R K+Q+K+I+N RQVTFSKRR G+ KKA E+SVLCDA+VALIIFS GKL+EY++
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATD 60
Query: 61 S-MKEILEKHRVHS 73
S M +ILE++ +S
Sbjct: 61 SCMDKILERYERYS 74
>sp|D7KWY6|AP1_ARALL Floral homeotic protein APETALA 1 OS=Arabidopsis lyrata subsp.
lyrata GN=AP1 PE=3 SV=1
Length = 256
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R ++Q+K+I+N RQVTFSKRR G+ KKA E+SVLCDA+VAL++FS GKLFEYS+
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 S-MKEILEKHRVHS 73
S M++ILE++ +S
Sbjct: 61 SCMEKILERYERYS 74
>sp|Q38876|AGL8_ARATH Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana
GN=AGL8 PE=1 SV=1
Length = 242
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 58/70 (82%), Gaps = 1/70 (1%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R ++Q+K+I+N RQVTFSKRR G+ KKA E+SVLCDA+VALI+FS+ GKLFEYS+
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTD 60
Query: 61 S-MKEILEKH 69
S M+ ILE++
Sbjct: 61 SCMERILERY 70
>sp|P29381|AGL1_ARATH Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana
GN=AGL1 PE=1 SV=1
Length = 248
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
+ R KI+IK+I+N T RQVTF KRR G+ KKA ELSVLCDA+VAL+IFS G+L+EY+++
Sbjct: 16 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANN 75
Query: 61 SMKEILEKHRVHSKNLERVDQPSV 84
S++ +E+++ + V+ PSV
Sbjct: 76 SVRGTIERYKKACSDA--VNPPSV 97
>sp|Q38836|AGL11_ARATH Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana
GN=AGL11 PE=1 SV=1
Length = 230
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 59/70 (84%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R KI+IK+I+N+T RQVTF KRR G+ KKA ELSVLCDA+VALI+FS G+L+EY+++
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60
Query: 61 SMKEILEKHR 70
+++ +E+++
Sbjct: 61 NIRSTIERYK 70
>sp|P35631|AP1_ARATH Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1
PE=1 SV=2
Length = 256
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R ++Q+K+I+N RQVTFSKRR G+ KKA E+SVLCDA+VAL++FS GKLFEYS+
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 S-MKEILEKHRVHS 73
S M++ILE++ +S
Sbjct: 61 SCMEKILERYERYS 74
>sp|Q40872|AG_PANGI Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1
Length = 242
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 58/70 (82%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
+ R KI+IK+I+N T RQVTF KRR G+ KKA ELSVLCDA+VALI+FS G+L+EY+++
Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 76
Query: 61 SMKEILEKHR 70
S+K +E+++
Sbjct: 77 SVKGTIERYK 86
>sp|Q41276|AP1_SINAL Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2
SV=1
Length = 254
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R ++Q+K+I+N RQVTFSKRR G+ KKA E+SVLCDA+VAL++FS GKLFEYS+
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 S-MKEILEKHRVHS 73
S M++ILE++ +S
Sbjct: 61 SCMEKILERYERYS 74
>sp|Q8GTF5|AP1A_BRAOB Floral homeotic protein APETALA 1 A OS=Brassica oleracea var.
botrytis GN=AP1A PE=2 SV=1
Length = 256
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R ++Q+K+I+N RQVTFSKRR G+ KKA E+SVLCDA+VAL++FS GKLFEYS+
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLMKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 S-MKEILEKHRVHS 73
S M++ILE++ +S
Sbjct: 61 SCMEKILERYERYS 74
>sp|B4YPW6|AP1A_BRAOA Floral homeotic protein APETALA 1 A OS=Brassica oleracea var.
alboglabra GN=AP1A PE=3 SV=1
Length = 256
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
Query: 1 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSS 60
M R ++Q+K+I+N RQVTFSKRR G+ KKA E+SVLCDA+VAL++FS GKLFEYS+
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLMKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 S-MKEILEKHRVHS 73
S M++ILE++ +S
Sbjct: 61 SCMEKILERYERYS 74
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.132 0.354
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,294,778
Number of Sequences: 539616
Number of extensions: 922302
Number of successful extensions: 2835
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2659
Number of HSP's gapped (non-prelim): 179
length of query: 96
length of database: 191,569,459
effective HSP length: 66
effective length of query: 30
effective length of database: 155,954,803
effective search space: 4678644090
effective search space used: 4678644090
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)