BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034370
MYDTDEVVFCPLFSLFCLVCFDWISGLWGPQCKSSMIAKENCALRCLSPTCYEFVYESDP
LEEGEKDFVRSQEFKYCMHKLSLGESLEGIRGSFDY

High Scoring Gene Products

Symbol, full name Information P value
AT5G17610 protein from Arabidopsis thaliana 3.4e-29

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034370
        (96 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2151426 - symbol:AT5G17610 "AT5G17610" species...   324  3.4e-29   1


>TAIR|locus:2151426 [details] [associations]
            symbol:AT5G17610 "AT5G17610" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0005783 "endoplasmic
            reticulum" evidence=IDA] GO:GO:0005783 EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:BT025595 EMBL:AK175531 EMBL:AK176664
            IPI:IPI00537114 RefSeq:NP_568353.1 UniGene:At.31526 PaxDb:Q67Y04
            PRIDE:Q67Y04 EnsemblPlants:AT5G17610.1 GeneID:831627
            KEGG:ath:AT5G17610 TAIR:At5g17610 eggNOG:NOG126173
            HOGENOM:HOG000140917 InParanoid:Q67Y04 OMA:DIESGLW PhylomeDB:Q67Y04
            ProtClustDB:CLSN2689749 Genevestigator:Q67Y04 Uniprot:Q67Y04
        Length = 121

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 59/76 (77%), Positives = 66/76 (86%)

Query:    20 CF-DWISGLWGPQCKSSMIAKENCALRCLSPTCYEFVYESDPLEEGEKDFVRSQEFKYCM 78
             C+ D  SGLWG QCKSS IAKENCALRCLSP CY+ +YESDPLEEGEKD +RSQE+KYCM
Sbjct:    46 CYGDIESGLWGWQCKSSAIAKENCALRCLSPVCYQLIYESDPLEEGEKDLIRSQEYKYCM 105

Query:    79 HKLSLGESLEGIRGSF 94
             +K SLGESLEG+RG F
Sbjct:   106 YKSSLGESLEGVRGIF 121


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.142   0.478    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       96        96   0.00091  102 3  11 22  0.48    29
                                                     29  0.43    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  578 (61 KB)
  Total size of DFA:  137 KB (2085 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.21u 0.10s 11.31t   Elapsed:  00:00:00
  Total cpu time:  11.21u 0.10s 11.31t   Elapsed:  00:00:00
  Start:  Fri May 10 22:33:33 2013   End:  Fri May 10 22:33:33 2013

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