BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034383
(96 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26
OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1
Length = 153
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 40/73 (54%)
Query: 3 MRINLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGRFRPSDVAIKIRKKMNRRVE 62
+++ +DC GC RK+RR + MK + + +E + +V+V G P+ V ++ + ++VE
Sbjct: 30 IKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMSHRTGKKVE 89
Query: 63 ILEIQEHNESNEP 75
+ ++ P
Sbjct: 90 LWPYVPYDVVAHP 102
>sp|Q8BI73|ZN775_MOUSE Zinc finger protein 775 OS=Mus musculus GN=Znf775 PE=2 SV=1
Length = 538
Score = 35.0 bits (79), Expect = 0.15, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 8/95 (8%)
Query: 9 CNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGRFRPSDVAIKIRKKMNRRVEILEIQE 68
C+ C R R+ +K + HL Q R + CG+ PS A++ ++++ E+L Q
Sbjct: 337 CSHCGRSFRQKQHLLKHLRTHLPGAQAARCTSCGQSCPSRAALRAHQRVHTAAELLRSQS 396
Query: 69 HNESNEPADQKPT--------NEQADQKPTNVICG 95
P + Q Q V+CG
Sbjct: 397 AVRDGVPGSESQAEIAQSVVVKPQGPQGAKEVLCG 431
>sp|Q4IB96|AEF1_GIBZE Chromatin modification-related protein EAF1 OS=Gibberella zeae
(strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084)
GN=EAF1 PE=3 SV=1
Length = 1629
Score = 29.6 bits (65), Expect = 5.9, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 53 IRKKMNRRVEILEIQEHNESNEPADQKPTNEQADQKPT 90
+RK +R + Q+H S A++K TNE A Q+PT
Sbjct: 1170 MRKLAKKRETTAQKQQHTASQNAANKK-TNESASQRPT 1206
>sp|A2R180|PAN1_ASPNC Actin cytoskeleton-regulatory complex protein pan1 OS=Aspergillus
niger (strain CBS 513.88 / FGSC A1513) GN=pan1 PE=3 SV=1
Length = 1434
Score = 29.3 bits (64), Expect = 7.4, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 36 CRVSVCGRFRPSDVAIKIRKKMNRRVEILEIQEHNESNEPA 76
C + + GR PS + KIR +++ V+I+ Q + EPA
Sbjct: 235 CNLRITGRELPSALPEKIRNEVSSMVDIISFQVPDTQPEPA 275
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,404,057
Number of Sequences: 539616
Number of extensions: 1120612
Number of successful extensions: 3219
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 3206
Number of HSP's gapped (non-prelim): 19
length of query: 96
length of database: 191,569,459
effective HSP length: 66
effective length of query: 30
effective length of database: 155,954,803
effective search space: 4678644090
effective search space used: 4678644090
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)