Query 034383
Match_columns 96
No_of_seqs 119 out of 1046
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 22:14:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034383.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034383hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwl_A Copper transport protei 99.7 9.9E-18 3.4E-22 99.3 8.7 63 2-66 5-67 (68)
2 1cc8_A Protein (metallochapero 99.7 5.1E-16 1.7E-20 92.4 9.1 64 2-66 8-72 (73)
3 4a4j_A Pacszia, cation-transpo 99.6 3.4E-15 1.2E-19 87.3 8.3 62 2-64 5-69 (69)
4 2crl_A Copper chaperone for su 99.6 9.5E-15 3.3E-19 92.9 9.2 67 2-69 22-88 (98)
5 3dxs_X Copper-transporting ATP 99.6 2.3E-14 7.9E-19 84.9 8.6 64 2-66 5-72 (74)
6 3fry_A Probable copper-exporti 99.5 2.2E-14 7.6E-19 85.6 6.6 62 2-66 8-70 (73)
7 2roe_A Heavy metal binding pro 99.5 4E-14 1.4E-18 81.8 6.7 62 2-64 3-65 (66)
8 2xmm_A SSR2857 protein, ATX1; 99.5 4.8E-14 1.6E-18 79.8 5.8 59 2-61 4-63 (64)
9 1cpz_A Protein (COPZ); copper 99.4 1.2E-12 4.3E-17 74.6 9.2 63 1-64 2-68 (68)
10 1aw0_A Menkes copper-transport 99.4 1.2E-12 4E-17 75.6 7.8 62 2-64 6-71 (72)
11 2xmw_A PACS-N, cation-transpor 99.4 2.3E-12 8E-17 74.0 8.7 62 2-64 6-70 (71)
12 2l3m_A Copper-ION-binding prot 99.4 1.7E-12 5.6E-17 75.0 7.6 59 2-61 8-70 (71)
13 1fvq_A Copper-transporting ATP 99.4 1.4E-12 4.8E-17 75.3 7.2 63 2-65 5-70 (72)
14 2kt2_A Mercuric reductase; nme 99.4 2.2E-12 7.5E-17 74.2 7.9 62 2-64 3-67 (69)
15 1osd_A MERP, hypothetical prot 99.4 2.4E-12 8.4E-17 74.3 8.1 62 2-64 6-71 (72)
16 3cjk_B Copper-transporting ATP 99.4 4.6E-12 1.6E-16 74.1 9.3 64 2-66 5-72 (75)
17 2k2p_A Uncharacterized protein 99.4 6.1E-13 2.1E-17 82.4 5.7 59 2-61 25-84 (85)
18 2g9o_A Copper-transporting ATP 99.4 1.6E-12 5.6E-17 80.4 7.1 66 2-68 6-78 (90)
19 1qup_A Superoxide dismutase 1 99.4 2.2E-12 7.5E-17 93.5 8.7 67 2-69 9-75 (222)
20 1kvi_A Copper-transporting ATP 99.3 4.3E-12 1.5E-16 75.1 7.6 64 2-66 11-78 (79)
21 1q8l_A Copper-transporting ATP 99.3 3.1E-12 1E-16 77.4 6.9 64 2-66 12-79 (84)
22 2qif_A Copper chaperone COPZ; 99.3 5.6E-12 1.9E-16 71.1 7.6 59 2-61 5-67 (69)
23 2kyz_A Heavy metal binding pro 99.3 1.5E-12 5E-17 75.4 4.8 59 2-63 4-63 (67)
24 1yg0_A COP associated protein; 99.3 3.8E-12 1.3E-16 72.1 6.5 59 2-61 4-65 (66)
25 1y3j_A Copper-transporting ATP 99.3 3.9E-12 1.3E-16 75.1 6.6 64 2-66 6-73 (77)
26 1mwy_A ZNTA; open-faced beta-s 99.3 1.4E-11 4.7E-16 72.0 8.8 61 2-63 6-68 (73)
27 1yjr_A Copper-transporting ATP 99.3 5.8E-12 2E-16 73.2 7.0 63 2-65 7-73 (75)
28 1opz_A Potential copper-transp 99.3 8E-12 2.7E-16 72.4 7.0 62 2-64 9-74 (76)
29 1p6t_A Potential copper-transp 99.3 6.7E-12 2.3E-16 82.5 7.5 66 2-68 77-146 (151)
30 1jk9_B CCS, copper chaperone f 99.3 7.7E-12 2.6E-16 92.1 8.5 67 2-69 10-76 (249)
31 2ew9_A Copper-transporting ATP 99.3 1.1E-11 3.7E-16 81.0 7.6 62 2-64 83-148 (149)
32 1jww_A Potential copper-transp 99.3 1.8E-11 6.1E-16 72.0 7.0 64 2-66 6-73 (80)
33 2ldi_A Zinc-transporting ATPas 99.3 1.1E-11 3.8E-16 70.6 5.8 60 2-62 6-69 (71)
34 2kkh_A Putative heavy metal tr 99.2 8.5E-11 2.9E-15 72.7 9.1 64 2-66 19-86 (95)
35 2ofg_X Zinc-transporting ATPas 99.2 1E-10 3.5E-15 75.1 8.4 62 2-64 11-76 (111)
36 2rop_A Copper-transporting ATP 99.2 1.1E-10 3.7E-15 81.2 8.1 64 2-66 125-192 (202)
37 2aj0_A Probable cadmium-transp 99.2 4.6E-11 1.6E-15 69.5 5.1 58 2-64 6-64 (71)
38 2ew9_A Copper-transporting ATP 99.1 6.7E-10 2.3E-14 72.4 7.7 63 2-65 7-73 (149)
39 2rop_A Copper-transporting ATP 98.8 1.3E-08 4.5E-13 70.6 7.1 62 2-64 23-91 (202)
40 1p6t_A Potential copper-transp 98.8 2.5E-08 8.6E-13 65.2 7.3 59 2-61 9-71 (151)
41 3j09_A COPA, copper-exporting 98.7 3.6E-08 1.2E-12 80.9 8.2 60 2-62 5-68 (723)
42 3bpd_A Uncharacterized protein 92.5 0.49 1.7E-05 30.3 6.3 46 15-61 23-76 (100)
43 2x3d_A SSO6206; unknown functi 91.8 0.77 2.6E-05 29.2 6.5 47 15-62 22-76 (96)
44 2raq_A Conserved protein MTH88 91.6 0.47 1.6E-05 30.2 5.4 47 15-62 23-77 (97)
45 3lno_A Putative uncharacterize 83.9 0.94 3.2E-05 28.5 3.1 32 3-34 48-86 (108)
46 3cq1_A Putative uncharacterize 83.6 1.5 5.1E-05 27.1 4.0 32 3-34 45-82 (103)
47 1uwd_A Hypothetical protein TM 79.8 2.5 8.4E-05 26.1 3.9 51 3-58 46-102 (103)
48 2nyt_A Probable C->U-editing e 78.4 5.6 0.00019 27.7 5.8 60 2-67 86-148 (190)
49 2cpq_A FragIle X mental retard 66.4 20 0.00069 22.1 6.4 37 17-54 37-73 (91)
50 3pro_C Alpha-lytic protease; P 55.4 33 0.0011 23.3 5.7 36 23-59 113-149 (166)
51 1t1v_A SH3BGRL3, SH3 domain-bi 55.2 28 0.00097 20.1 5.3 43 5-58 8-55 (93)
52 2qip_A Protein of unknown func 54.5 8.6 0.00029 25.3 2.6 33 35-68 110-143 (165)
53 2jsx_A Protein NAPD; TAT, proo 49.9 42 0.0014 20.5 9.9 43 12-54 18-61 (95)
54 3q9p_A Heat shock protein beta 46.1 20 0.00067 21.1 3.1 25 22-46 14-40 (85)
55 3hz7_A Uncharacterized protein 45.2 47 0.0016 19.8 5.6 49 6-65 8-60 (87)
56 2kgs_A Uncharacterized protein 44.7 10 0.00035 24.5 1.7 28 27-54 77-104 (132)
57 2hiy_A Hypothetical protein; C 42.7 63 0.0022 21.9 5.6 50 14-64 25-78 (183)
58 4e6k_G BFD, bacterioferritin-a 40.2 7.3 0.00025 23.0 0.4 20 4-23 33-52 (73)
59 2k1h_A Uncharacterized protein 39.1 43 0.0015 20.6 3.9 37 16-54 41-79 (94)
60 2e9h_A EIF-5, eukaryotic trans 38.9 43 0.0015 22.7 4.2 27 28-54 71-97 (157)
61 2ko1_A CTR148A, GTP pyrophosph 37.6 54 0.0018 18.3 4.0 8 47-54 60-67 (88)
62 2yy3_A Elongation factor 1-bet 36.9 26 0.00088 21.6 2.6 21 13-33 67-87 (91)
63 2ct6_A SH3 domain-binding glut 35.8 53 0.0018 19.8 4.0 29 6-35 15-48 (111)
64 2y1y_A Alpha-crystallin B chai 34.6 27 0.00093 20.6 2.4 23 22-44 13-37 (90)
65 2z30_B TK-subtilisin; thermoco 34.0 56 0.0019 18.1 3.6 26 3-33 35-60 (65)
66 4dx5_A Acriflavine resistance 33.9 43 0.0015 28.2 4.2 43 13-55 159-209 (1057)
67 4ar0_A Type IV pilus biogenesi 33.6 93 0.0032 19.8 5.6 49 13-62 43-93 (128)
68 3ctg_A Glutaredoxin-2; reduced 33.6 87 0.003 19.4 5.5 47 5-59 43-92 (129)
69 1gh8_A Translation elongation 33.6 31 0.001 21.2 2.5 23 11-33 62-84 (89)
70 2wj5_A Heat shock protein beta 33.1 29 0.00098 21.0 2.4 23 22-44 18-42 (101)
71 2v50_A Multidrug resistance pr 32.2 41 0.0014 28.4 3.9 43 13-55 159-209 (1052)
72 3l1e_A Alpha-crystallin A chai 30.9 32 0.0011 21.0 2.4 23 22-44 19-43 (106)
73 3gla_A Low molecular weight he 30.6 26 0.00088 20.8 1.8 24 22-45 21-46 (100)
74 1tua_A Hypothetical protein AP 30.1 1E+02 0.0035 21.2 5.0 38 14-52 23-63 (191)
75 3mso_A Steroid delta-isomerase 30.0 24 0.00083 22.4 1.7 37 22-58 95-131 (143)
76 2fi0_A Conserved domain protei 29.2 44 0.0015 19.5 2.7 19 43-62 60-78 (81)
77 1u6t_A SH3 domain-binding glut 28.6 78 0.0027 20.2 4.0 31 3-34 4-39 (121)
78 4fei_A Heat shock protein-rela 28.4 30 0.001 20.9 1.8 24 22-45 23-48 (102)
79 2g2k_A EIF-5, eukaryotic trans 28.4 57 0.0019 22.4 3.4 26 29-54 65-90 (170)
80 3flj_A Uncharacterized protein 28.1 26 0.00087 23.3 1.6 37 22-58 102-138 (155)
81 1vbk_A Hypothetical protein PH 27.8 63 0.0022 23.5 3.8 45 12-58 26-70 (307)
82 3gzb_A Putative snoal-like pol 27.5 70 0.0024 21.5 3.6 32 22-53 119-151 (154)
83 1f60_B Elongation factor EEF1B 27.3 50 0.0017 20.4 2.8 23 11-33 67-90 (94)
84 4eld_A MJ16.5-P1, small heat s 27.1 39 0.0013 22.1 2.4 24 22-45 73-98 (161)
85 1wh9_A 40S ribosomal protein S 27.0 1.1E+02 0.0037 18.5 4.5 40 24-63 23-77 (92)
86 1b64_A Elongation factor 1-bet 27.0 50 0.0017 20.2 2.7 23 11-33 64-87 (91)
87 2d74_B Translation initiation 26.9 60 0.0021 21.7 3.3 24 29-54 75-98 (148)
88 1nkw_F 50S ribosomal protein L 26.0 1.1E+02 0.0037 20.1 4.4 39 21-61 69-107 (146)
89 1wik_A Thioredoxin-like protei 25.8 1.1E+02 0.0037 18.1 5.5 41 7-59 28-68 (109)
90 2e3u_A PH-DIM2P, hypothetical 25.8 1E+02 0.0036 21.5 4.5 38 15-53 54-94 (219)
91 4bby_A Alkyldihydroxyacetoneph 25.6 61 0.0021 26.0 3.7 30 29-59 267-296 (658)
92 3hlu_A Uncharacterized protein 25.4 97 0.0033 18.7 3.8 30 37-67 10-39 (96)
93 2fwh_A Thiol:disulfide interch 24.9 1.1E+02 0.0039 18.2 4.2 29 7-35 41-75 (134)
94 3v4k_A DNA DC->DU-editing enzy 24.5 92 0.0032 21.9 4.0 56 8-68 110-165 (203)
95 2wem_A Glutaredoxin-related pr 24.4 1.3E+02 0.0044 18.5 4.7 40 8-59 34-74 (118)
96 1jdq_A TM006 protein, hypothet 24.2 1.3E+02 0.0043 18.3 6.8 51 6-66 33-85 (98)
97 3aqo_A Probable secdf protein- 24.0 1.8E+02 0.0062 20.2 5.5 51 14-67 30-85 (229)
98 1veh_A NIFU-like protein hirip 23.7 66 0.0023 19.6 2.8 30 2-31 46-85 (92)
99 3h8q_A Thioredoxin reductase 3 22.8 1.3E+02 0.0044 17.9 5.6 45 6-59 24-68 (114)
100 2w7v_A General secretion pathw 22.6 1.4E+02 0.0048 18.3 5.3 49 16-66 17-71 (95)
101 1qd1_A Formiminotransferase-cy 22.2 1.2E+02 0.0041 22.9 4.4 45 13-57 19-65 (325)
102 1aba_A Glutaredoxin; electron 22.2 1.1E+02 0.0039 17.0 5.2 46 8-60 13-58 (87)
103 3tsh_A Pollen allergen PHL P 4 22.0 1.1E+02 0.0036 23.5 4.3 38 23-61 106-143 (500)
104 3aab_A Putative uncharacterize 21.9 44 0.0015 20.8 1.8 25 22-46 41-68 (123)
105 2ctf_A Vigilin; K homology typ 21.8 1.4E+02 0.0049 18.1 5.5 28 15-43 48-75 (102)
106 3e3x_A BIPA; MCSG,PSI2, struct 21.7 81 0.0028 23.7 3.5 54 13-67 55-113 (332)
107 3vow_A Probable DNA DC->DU-edi 20.9 54 0.0018 22.9 2.2 50 8-68 96-152 (190)
108 1pqx_A Conserved hypothetical 20.8 44 0.0015 20.5 1.5 38 16-55 41-80 (91)
109 2hh2_A KH-type splicing regula 20.6 1.3E+02 0.0044 18.3 3.8 33 19-54 31-71 (107)
110 2yvs_A Glycolate oxidase subun 20.6 74 0.0025 22.0 2.9 30 29-59 1-30 (219)
111 1qys_A TOP7; alpha-beta, novel 20.6 1.6E+02 0.0054 18.0 4.4 28 18-46 69-96 (106)
112 2zzt_A Putative uncharacterize 20.6 76 0.0026 19.2 2.6 17 13-29 12-28 (107)
113 3f8x_A Putative delta-5-3-keto 20.5 45 0.0015 21.6 1.6 37 22-58 104-140 (148)
114 2y9j_Y Lipoprotein PRGK, prote 20.3 87 0.003 21.0 3.1 19 13-31 90-108 (170)
115 2gjh_A Designed protein; oblig 20.1 1.3E+02 0.0044 16.8 3.3 27 18-45 25-51 (62)
116 2wci_A Glutaredoxin-4; redox-a 20.1 1.8E+02 0.006 18.4 5.2 26 7-34 48-73 (135)
No 1
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.74 E-value=9.9e-18 Score=99.34 Aligned_cols=63 Identities=16% Similarity=0.391 Sum_probs=60.9
Q ss_pred EEEEeccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEeeCCHHHHHHHHHHhcCCcEEEeec
Q 034383 2 VMRINLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGRFRPSDVAIKIRKKMNRRVEILEI 66 (96)
Q Consensus 2 vlkV~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~~dp~~l~~~l~kk~Gk~a~i~~~ 66 (96)
+|+|+|+|.+|+.+|+++|.+++|| ++.+|+.+++++|.+..+++.|.++|+ ++||.+.+|++
T Consensus 5 ~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~-~~Gy~~~~~~~ 67 (68)
T 3iwl_A 5 EFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLK-KTGKTVSYLGL 67 (68)
T ss_dssp EEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHH-TTCSCEEEEEC
T ss_pred EEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHH-HcCCceEecCC
Confidence 5888999999999999999999999 999999999999999999999999999 99999999986
No 2
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.67 E-value=5.1e-16 Score=92.35 Aligned_cols=64 Identities=17% Similarity=0.316 Sum_probs=60.9
Q ss_pred EEEEeccchhhHHHHHHHHhcCC-CceEEEEEcCCCEEEEEeeCCHHHHHHHHHHhcCCcEEEeec
Q 034383 2 VMRINLDCNGCCRKLRRILLNMK-EIEAHLIEKQQCRVSVCGRFRPSDVAIKIRKKMNRRVEILEI 66 (96)
Q Consensus 2 vlkV~M~C~~C~~kI~k~L~~l~-GV~~v~vD~~~~~VtV~g~~dp~~l~~~l~kk~Gk~a~i~~~ 66 (96)
+|+|+|+|.+|+.+|+++|.+++ ||.++.+|+.+++++|.+..++..|.++|+ ++||.+.+|.+
T Consensus 8 ~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~-~~Gy~~~~~~~ 72 (73)
T 1cc8_A 8 QFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIK-KTGKEVRSGKQ 72 (73)
T ss_dssp EEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHH-TTSSCEEEEEE
T ss_pred EEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHH-HhCCCceeeec
Confidence 58899999999999999999999 999999999999999999999999999999 99999998864
No 3
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.61 E-value=3.4e-15 Score=87.35 Aligned_cols=62 Identities=13% Similarity=0.372 Sum_probs=58.0
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEE--eeCCHHHHHHHHHHhcCCcEEEe
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVC--GRFRPSDVAIKIRKKMNRRVEIL 64 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~--g~~dp~~l~~~l~kk~Gk~a~i~ 64 (96)
+|.| +|+|.+|+.+|+++|.+++||.++.+|+.+++++|. +..++..|.++|+ ++||.++++
T Consensus 5 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~Gy~~~~~ 69 (69)
T 4a4j_A 5 NLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVE-RAGYHARVL 69 (69)
T ss_dssp EEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHH-HTTCEEEEC
T ss_pred EEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHH-HcCCceEeC
Confidence 5778 799999999999999999999999999999999998 6789999999999 999998764
No 4
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=9.5e-15 Score=92.87 Aligned_cols=67 Identities=12% Similarity=0.263 Sum_probs=62.7
Q ss_pred EEEEeccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEeeCCHHHHHHHHHHhcCCcEEEeeccCC
Q 034383 2 VMRINLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGRFRPSDVAIKIRKKMNRRVEILEIQEH 69 (96)
Q Consensus 2 vlkV~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~~dp~~l~~~l~kk~Gk~a~i~~~~~~ 69 (96)
+|+|.|+|.+|+.+|+++|.+++||.++.+|+..++++|.+.+++..|.++|+ ++||.+.++.....
T Consensus 22 ~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~-~~Gy~~~~~~~~~~ 88 (98)
T 2crl_A 22 EFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLE-GTGRQAVLKGMGSG 88 (98)
T ss_dssp EEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHH-TTTSCEEEEESCCC
T ss_pred EEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHH-HhCCceEEccCCCC
Confidence 58899999999999999999999999999999999999999899999999999 99999999876544
No 5
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.56 E-value=2.3e-14 Score=84.95 Aligned_cols=64 Identities=19% Similarity=0.308 Sum_probs=58.8
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEe---eCCHHHHHHHHHHhcCCcEEEeec
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCG---RFRPSDVAIKIRKKMNRRVEILEI 66 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g---~~dp~~l~~~l~kk~Gk~a~i~~~ 66 (96)
+|.| +|+|.+|+.+|+++|.+++||.++.+|+.+++++|.. .++++.|.++|+ ++||.+.+++.
T Consensus 5 ~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~ 72 (74)
T 3dxs_X 5 QVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIE-DAGFEAEILAE 72 (74)
T ss_dssp EEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHH-HHTCEEEEEEE
T ss_pred EEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HCCCceEEccC
Confidence 5777 7999999999999999999999999999999999974 368999999999 99999998864
No 6
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.53 E-value=2.2e-14 Score=85.60 Aligned_cols=62 Identities=10% Similarity=0.248 Sum_probs=58.2
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEeeCCHHHHHHHHHHhcCCcEEEeec
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGRFRPSDVAIKIRKKMNRRVEILEI 66 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~~dp~~l~~~l~kk~Gk~a~i~~~ 66 (96)
+|.| +|+|.+|+.+|+++|.+ +||.++.+|+.+++++|..+ ++..|.++|+ ++||.+.+++.
T Consensus 8 ~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~-~~Gy~~~~~~~ 70 (73)
T 3fry_A 8 VLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVE-AAGYQAKLRSS 70 (73)
T ss_dssp EEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHH-HTTCEEEECCS
T ss_pred EEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHH-HcCCceEecCc
Confidence 5777 79999999999999999 99999999999999999988 9999999999 99999998864
No 7
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=99.51 E-value=4e-14 Score=81.76 Aligned_cols=62 Identities=16% Similarity=0.367 Sum_probs=57.3
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEeeCCHHHHHHHHHHhcCCcEEEe
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGRFRPSDVAIKIRKKMNRRVEIL 64 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~~dp~~l~~~l~kk~Gk~a~i~ 64 (96)
.|.| +|+|.+|+.+|+++|.+++||.++.+|+..++++|.+..++..|.++|+ ++||.+..+
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~-~~Gy~~~~~ 65 (66)
T 2roe_A 3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVE-EEGYKAEVL 65 (66)
T ss_dssp CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHH-TTTCEEEEC
T ss_pred EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHH-HcCCCcEec
Confidence 5777 7999999999999999999999999999999999987789999999999 999988654
No 8
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=99.49 E-value=4.8e-14 Score=79.75 Aligned_cols=59 Identities=10% Similarity=0.291 Sum_probs=55.4
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEeeCCHHHHHHHHHHhcCCcE
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGRFRPSDVAIKIRKKMNRRV 61 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~~dp~~l~~~l~kk~Gk~a 61 (96)
+|+| +|+|.+|+.+|+++|.+++||.++.+|+..++++|.+..++..|.++|+ ++||.+
T Consensus 4 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~-~~G~~~ 63 (64)
T 2xmm_A 4 QLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIA-SAGYEV 63 (64)
T ss_dssp EEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHH-HTTCCC
T ss_pred EEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHH-HcCCCC
Confidence 5777 7999999999999999999999999999999999998889999999999 899975
No 9
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=99.44 E-value=1.2e-12 Score=74.59 Aligned_cols=63 Identities=10% Similarity=0.318 Sum_probs=56.6
Q ss_pred CEEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEee---CCHHHHHHHHHHhcCCcEEEe
Q 034383 1 MVMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGR---FRPSDVAIKIRKKMNRRVEIL 64 (96)
Q Consensus 1 ~vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~---~dp~~l~~~l~kk~Gk~a~i~ 64 (96)
+.|+| +|+|.+|+.+|+++|.+++||.++.+|+..++++|..+ .++..|.++|+ ++||.++++
T Consensus 2 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~ 68 (68)
T 1cpz_A 2 QEFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAIN-ELGYQAEVI 68 (68)
T ss_dssp CEEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-TTSSCEEEC
T ss_pred EEEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCcccC
Confidence 46788 79999999999999999999999999999999999854 57889999999 999988763
No 10
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=99.41 E-value=1.2e-12 Score=75.64 Aligned_cols=62 Identities=15% Similarity=0.282 Sum_probs=56.0
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEee---CCHHHHHHHHHHhcCCcEEEe
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGR---FRPSDVAIKIRKKMNRRVEIL 64 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~---~dp~~l~~~l~kk~Gk~a~i~ 64 (96)
+|+| +|+|.+|+.+|+++|.+++||.++.+|+..++++|..+ .++..|.++|+ .+||.+.+.
T Consensus 6 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~ 71 (72)
T 1aw0_A 6 VINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIE-DMGFDATLS 71 (72)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCEEEEC
T ss_pred EEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHH-HCCCCcEeC
Confidence 5778 89999999999999999999999999999999999864 57889999999 999987654
No 11
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=99.40 E-value=2.3e-12 Score=73.99 Aligned_cols=62 Identities=10% Similarity=0.285 Sum_probs=54.5
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEee--CCHHHHHHHHHHhcCCcEEEe
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGR--FRPSDVAIKIRKKMNRRVEIL 64 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~--~dp~~l~~~l~kk~Gk~a~i~ 64 (96)
.|+| +|+|.+|+.+|+++|.+++||.++.+|+..++++|..+ .++..|.++|+ .+||.+..+
T Consensus 6 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~G~~~~~~ 70 (71)
T 2xmw_A 6 NLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVE-RAGYHARVL 70 (71)
T ss_dssp EEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHH-HHTCEEEEE
T ss_pred EEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHH-HcCCCceeC
Confidence 5777 69999999999999999999999999999999999743 67888999999 999987654
No 12
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=99.39 E-value=1.7e-12 Score=74.98 Aligned_cols=59 Identities=14% Similarity=0.288 Sum_probs=53.6
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEe---eCCHHHHHHHHHHhcCCcE
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCG---RFRPSDVAIKIRKKMNRRV 61 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g---~~dp~~l~~~l~kk~Gk~a 61 (96)
+|+| +|+|.+|+.+|+++|.+++||.++.+|+..++++|.. ..++..|.++|+ ++||.+
T Consensus 8 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~ 70 (71)
T 2l3m_A 8 TLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIE-DQGYDV 70 (71)
T ss_dssp EEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHH-HTTCEE
T ss_pred EEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCC
Confidence 5777 7999999999999999999999999999999999974 367889999999 899975
No 13
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=99.39 E-value=1.4e-12 Score=75.30 Aligned_cols=63 Identities=16% Similarity=0.275 Sum_probs=57.0
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEe--eCCHHHHHHHHHHhcCCcEEEee
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCG--RFRPSDVAIKIRKKMNRRVEILE 65 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g--~~dp~~l~~~l~kk~Gk~a~i~~ 65 (96)
.|+| +|+|.+|+.+|+++|.+++||.++.+|+..++++|.. ..++..|.++|+ .+||.+.++.
T Consensus 5 ~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~G~~~~~~~ 70 (72)
T 1fvq_A 5 ILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIE-DCGFDCEILR 70 (72)
T ss_dssp EEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHH-HHTCCEEEEE
T ss_pred EEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHH-HCCCceEEcc
Confidence 4777 7999999999999999999999999999999999985 367889999999 9999998874
No 14
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=99.39 E-value=2.2e-12 Score=74.24 Aligned_cols=62 Identities=10% Similarity=0.336 Sum_probs=55.4
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEee--CCHHHHHHHHHHhcCCcEEEe
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGR--FRPSDVAIKIRKKMNRRVEIL 64 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~--~dp~~l~~~l~kk~Gk~a~i~ 64 (96)
.|.| +|+|.+|+.+|+++|.+++||.++.+|+..++++|..+ .++..|.++|+ .+||.+.+.
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~Gy~~~~~ 67 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVA-GLGYKATLA 67 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHH-TTTSEEECC
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHH-HCCCceEeC
Confidence 5777 89999999999999999999999999999999999743 57889999999 999987653
No 15
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=99.39 E-value=2.4e-12 Score=74.26 Aligned_cols=62 Identities=5% Similarity=0.135 Sum_probs=55.5
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEee---CCHHHHHHHHHHhcCCcEEEe
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGR---FRPSDVAIKIRKKMNRRVEIL 64 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~---~dp~~l~~~l~kk~Gk~a~i~ 64 (96)
.|+| +|+|.+|+.+|+++|.+++||.++.+|+..++++|..+ .++..|.++|. .+||.+.+.
T Consensus 6 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~ 71 (72)
T 1osd_A 6 TLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATA-DAGYPSSVK 71 (72)
T ss_dssp EEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHH-HTTCCCEEC
T ss_pred EEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-hcCCCeEec
Confidence 5777 79999999999999999999999999999999999754 57889999999 999987653
No 16
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=99.38 E-value=4.6e-12 Score=74.11 Aligned_cols=64 Identities=13% Similarity=0.271 Sum_probs=57.5
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEee---CCHHHHHHHHHHhcCCcEEEeec
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGR---FRPSDVAIKIRKKMNRRVEILEI 66 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~---~dp~~l~~~l~kk~Gk~a~i~~~ 66 (96)
.|.| +|+|.+|+.+|+++|.+++||.++.+|+..++++|..+ .++..|.++|. .+||.+.+...
T Consensus 5 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~ 72 (75)
T 3cjk_B 5 TISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID-DMGFDAVIHNI 72 (75)
T ss_dssp EEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HTTCCEEEEEE
T ss_pred EEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCceEeecC
Confidence 5777 89999999999999999999999999999999999753 57889999999 99999887654
No 17
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=99.38 E-value=6.1e-13 Score=82.36 Aligned_cols=59 Identities=14% Similarity=0.176 Sum_probs=55.5
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEeeCCHHHHHHHHHHhcCCcE
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGRFRPSDVAIKIRKKMNRRV 61 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~~dp~~l~~~l~kk~Gk~a 61 (96)
+|+| +|+|.+|+.+|+++|.+++||.++.+|+..++++|.+.+++..|.++|+ .+||.+
T Consensus 25 ~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~-~~Gy~~ 84 (85)
T 2k2p_A 25 SFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIIT-AAGYTP 84 (85)
T ss_dssp EEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHH-HTTCCC
T ss_pred EEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHH-HcCCCC
Confidence 5777 7999999999999999999999999999999999998899999999999 999965
No 18
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=99.37 E-value=1.6e-12 Score=80.44 Aligned_cols=66 Identities=17% Similarity=0.295 Sum_probs=58.1
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEe---eCCHHHHHHHHHHhc---CCcEEEeeccC
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCG---RFRPSDVAIKIRKKM---NRRVEILEIQE 68 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g---~~dp~~l~~~l~kk~---Gk~a~i~~~~~ 68 (96)
.|+| +|+|.+|+.+|+++|.+++||.++.+|+..++++|.. .+++..|.++|. .+ ||.+.++++..
T Consensus 6 ~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~-~~g~Ggy~~~~~~~~~ 78 (90)
T 2g9o_A 6 TFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIE-AVSPGLYRVSITSEVE 78 (90)
T ss_dssp EEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHH-TTSTTTCEEECCCCC-
T ss_pred EEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHH-hccCCCeEEEEeCCCc
Confidence 5777 8999999999999999999999999999999999974 357889999999 88 59998887643
No 19
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.37 E-value=2.2e-12 Score=93.46 Aligned_cols=67 Identities=19% Similarity=0.314 Sum_probs=62.3
Q ss_pred EEEEeccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEeeCCHHHHHHHHHHhcCCcEEEeeccCC
Q 034383 2 VMRINLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGRFRPSDVAIKIRKKMNRRVEILEIQEH 69 (96)
Q Consensus 2 vlkV~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~~dp~~l~~~l~kk~Gk~a~i~~~~~~ 69 (96)
+|+|.|+|.+|+.+|+++|.+++||.++++|+.+++++|.+..++..|.++|+ ++||.+.++.....
T Consensus 9 ~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~-~~Gy~a~~~~~~~~ 75 (222)
T 1qup_A 9 TYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLR-NCGKDAIIRGAGKP 75 (222)
T ss_dssp EEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHH-HTTCCCEEECCSCT
T ss_pred EEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHH-HcCCccccccCCCc
Confidence 58888999999999999999999999999999999999999899999999999 99999998876443
No 20
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=99.35 E-value=4.3e-12 Score=75.08 Aligned_cols=64 Identities=11% Similarity=0.237 Sum_probs=56.9
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEee---CCHHHHHHHHHHhcCCcEEEeec
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGR---FRPSDVAIKIRKKMNRRVEILEI 66 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~---~dp~~l~~~l~kk~Gk~a~i~~~ 66 (96)
.|+| +|+|.+|+.+|+++|.+++||.++.+|+..++++|..+ .++..|.++|+ .+||.+.+.+.
T Consensus 11 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~ 78 (79)
T 1kvi_A 11 TISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID-DMGFDAVIHNP 78 (79)
T ss_dssp EEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHH-HHCCCEEECCC
T ss_pred EEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HCCCceEecCC
Confidence 5777 89999999999999999999999999999999999753 57789999999 99999877643
No 21
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=99.34 E-value=3.1e-12 Score=77.45 Aligned_cols=64 Identities=8% Similarity=0.236 Sum_probs=57.3
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEee---CCHHHHHHHHHHhcCCcEEEeec
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGR---FRPSDVAIKIRKKMNRRVEILEI 66 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~---~dp~~l~~~l~kk~Gk~a~i~~~ 66 (96)
.|+| +|+|.+|+.+|+++|.+++||.++.+|+..++++|..+ +++..|.++|+ .+||.+.+++.
T Consensus 12 ~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~ 79 (84)
T 1q8l_A 12 KMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIE-AMGFPAFVKKQ 79 (84)
T ss_dssp EEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHH-HTTCCEECSCC
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCceEecCC
Confidence 5777 89999999999999999999999999999999999853 57889999999 99998876653
No 22
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=99.34 E-value=5.6e-12 Score=71.11 Aligned_cols=59 Identities=15% Similarity=0.325 Sum_probs=53.1
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEe---eCCHHHHHHHHHHhcCCcE
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCG---RFRPSDVAIKIRKKMNRRV 61 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g---~~dp~~l~~~l~kk~Gk~a 61 (96)
.|+| +|+|.+|+.+|+++|..++||.++.+|+..++++|.. ..++..|.++|. .+||.+
T Consensus 5 ~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~ 67 (69)
T 2qif_A 5 TLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIE-DQGYDV 67 (69)
T ss_dssp EEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HTTCEE
T ss_pred EEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCc
Confidence 4777 6999999999999999999999999999999999974 357888999999 899965
No 23
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=99.33 E-value=1.5e-12 Score=75.41 Aligned_cols=59 Identities=19% Similarity=0.350 Sum_probs=52.8
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEeeCCHHHHHHHHHHhcCCcEEE
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGRFRPSDVAIKIRKKMNRRVEI 63 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~~dp~~l~~~l~kk~Gk~a~i 63 (96)
+|.| +|+|.+|+.+|+++|.++ ||.++.+|+..++++|..+.+ ..|.++|+ ++||.+..
T Consensus 4 ~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~-~~Gy~~~~ 63 (67)
T 2kyz_A 4 VLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLE-EIDYPVES 63 (67)
T ss_dssp EEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHH-TTTCCCCB
T ss_pred EEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHH-HcCCceee
Confidence 4777 899999999999999999 999999999999999987655 78999999 99997643
No 24
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=99.33 E-value=3.8e-12 Score=72.14 Aligned_cols=59 Identities=12% Similarity=0.226 Sum_probs=52.6
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEee--CCHHHHHHHHHHhcCCcE
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGR--FRPSDVAIKIRKKMNRRV 61 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~--~dp~~l~~~l~kk~Gk~a 61 (96)
.|.| +|+|.+|+.+|+++|.+++||.++.+|+..++++|..+ .++..|.++|+ .+||.+
T Consensus 4 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~G~~~ 65 (66)
T 1yg0_A 4 TFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALL-DAGQEV 65 (66)
T ss_dssp EECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHH-HHTCCC
T ss_pred EEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHH-HcCCCc
Confidence 4566 79999999999999999999999999999999999854 47888999999 899864
No 25
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=99.33 E-value=3.9e-12 Score=75.09 Aligned_cols=64 Identities=19% Similarity=0.331 Sum_probs=57.2
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEee---CCHHHHHHHHHHhcCCcEEEeec
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGR---FRPSDVAIKIRKKMNRRVEILEI 66 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~---~dp~~l~~~l~kk~Gk~a~i~~~ 66 (96)
.|+| +|+|.+|+.+|+++|.+++||.++.+|+..++++|..+ .++..|.++|. .+||.+.++..
T Consensus 6 ~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~ 73 (77)
T 1y3j_A 6 YIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIR-ELGFGATVIEN 73 (77)
T ss_dssp EEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHH-HHTSCEEEESC
T ss_pred EEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCceEECCc
Confidence 5777 89999999999999999999999999999999999753 57888999999 99999887643
No 26
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=99.32 E-value=1.4e-11 Score=72.00 Aligned_cols=61 Identities=13% Similarity=0.249 Sum_probs=53.5
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEeeC-CHHHHHHHHHHhcCCcEEE
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGRF-RPSDVAIKIRKKMNRRVEI 63 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~~-dp~~l~~~l~kk~Gk~a~i 63 (96)
.|.| +|+|.+|+.+|+++|.+++||.++.+|+..++++|..+- ....|.++|. .+||.+..
T Consensus 6 ~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~-~~Gy~~~~ 68 (73)
T 1mwy_A 6 SWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQ-KAGYSLRD 68 (73)
T ss_dssp EEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHH-HHTCEEEE
T ss_pred EEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHH-HcCCcccc
Confidence 4777 699999999999999999999999999999999998643 3677888998 99998754
No 27
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=99.32 E-value=5.8e-12 Score=73.18 Aligned_cols=63 Identities=13% Similarity=0.277 Sum_probs=55.4
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEee---CCHHHHHHHHHHhcCCcEEEee
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGR---FRPSDVAIKIRKKMNRRVEILE 65 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~---~dp~~l~~~l~kk~Gk~a~i~~ 65 (96)
.|+| +|+|.+|+.+|+++|.+++||.++.+|+..++++|..+ .++..|.++|. .+||.+.+..
T Consensus 7 ~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~~ 73 (75)
T 1yjr_A 7 ELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIE-SLGFEPSLVK 73 (75)
T ss_dssp EEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHH-HHHCEEEESS
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCceeec
Confidence 5777 79999999999999999999999999999999999854 45678899999 8999876543
No 28
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=99.31 E-value=8e-12 Score=72.38 Aligned_cols=62 Identities=19% Similarity=0.315 Sum_probs=55.2
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEe---eCCHHHHHHHHHHhcCCcEEEe
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCG---RFRPSDVAIKIRKKMNRRVEIL 64 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g---~~dp~~l~~~l~kk~Gk~a~i~ 64 (96)
.|+| +|+|.+|+.+|+++|.+++||.++.+|+..++++|.. ..++..|.++|. .+||.+..+
T Consensus 9 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~ 74 (76)
T 1opz_A 9 AMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE-KLGYHVVIE 74 (76)
T ss_dssp EEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHH-HHTCEEECC
T ss_pred EEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HCCCceecC
Confidence 4777 7999999999999999999999999999999999973 357889999999 999987654
No 29
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=99.30 E-value=6.7e-12 Score=82.54 Aligned_cols=66 Identities=15% Similarity=0.280 Sum_probs=59.1
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEe---eCCHHHHHHHHHHhcCCcEEEeeccC
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCG---RFRPSDVAIKIRKKMNRRVEILEIQE 68 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g---~~dp~~l~~~l~kk~Gk~a~i~~~~~ 68 (96)
.|+| +|+|.+|+.+|+++|.+++||.++.+|+..++++|.. .+++..|.++|+ .+||.+.++....
T Consensus 77 ~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~~~ 146 (151)
T 1p6t_A 77 EFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD-KLGYKLKLKGEQD 146 (151)
T ss_dssp EEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCCEEESCSSS
T ss_pred EEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HcCCCeEEcCccc
Confidence 5788 8999999999999999999999999999999999983 468899999999 9999998875543
No 30
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.30 E-value=7.7e-12 Score=92.12 Aligned_cols=67 Identities=19% Similarity=0.314 Sum_probs=62.2
Q ss_pred EEEEeccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEeeCCHHHHHHHHHHhcCCcEEEeeccCC
Q 034383 2 VMRINLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGRFRPSDVAIKIRKKMNRRVEILEIQEH 69 (96)
Q Consensus 2 vlkV~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~~dp~~l~~~l~kk~Gk~a~i~~~~~~ 69 (96)
+|+|.|+|.+|+.+|+++|.+++||.++.+|+.+++++|.+..++..|.++|+ ++||.+.++.....
T Consensus 10 ~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe-~~Gy~a~~~~~~~~ 76 (249)
T 1jk9_B 10 TYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLR-NCGKDAIIRGAGKP 76 (249)
T ss_dssp EEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHH-TTTCCCEEEEESST
T ss_pred EEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHH-HhCCCcccccCCcc
Confidence 57888999999999999999999999999999999999999899999999999 99999998876443
No 31
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.29 E-value=1.1e-11 Score=81.01 Aligned_cols=62 Identities=15% Similarity=0.266 Sum_probs=56.0
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEee---CCHHHHHHHHHHhcCCcEEEe
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGR---FRPSDVAIKIRKKMNRRVEIL 64 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~---~dp~~l~~~l~kk~Gk~a~i~ 64 (96)
.|+| +|+|.+|+.+|+++|.+++||.++.+|+..++++|..+ .++..|.++|+ ++||.+.++
T Consensus 83 ~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~ 148 (149)
T 2ew9_A 83 ELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIE-EIGFHASLA 148 (149)
T ss_dssp EEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHH-HHTCEEECC
T ss_pred EEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHH-hCCCceEec
Confidence 5777 89999999999999999999999999999999999854 57899999999 999987654
No 32
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=99.26 E-value=1.8e-11 Score=72.03 Aligned_cols=64 Identities=14% Similarity=0.261 Sum_probs=56.8
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEe---eCCHHHHHHHHHHhcCCcEEEeec
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCG---RFRPSDVAIKIRKKMNRRVEILEI 66 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g---~~dp~~l~~~l~kk~Gk~a~i~~~ 66 (96)
.|+| +|+|.+|+.+|+++|.+++||.++.+|+..++++|.. ..++..|.++|. .+||.+.++..
T Consensus 6 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~~~ 73 (80)
T 1jww_A 6 EFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD-KLGYKLKLKGE 73 (80)
T ss_dssp EEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHH-HHTSEEEECCS
T ss_pred EEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCeEEecCc
Confidence 4677 6999999999999999999999999999999999974 357888999999 89999888754
No 33
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=99.26 E-value=1.1e-11 Score=70.58 Aligned_cols=60 Identities=15% Similarity=0.345 Sum_probs=53.3
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEe---eCCHHHHHHHHHHhcCCcEE
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCG---RFRPSDVAIKIRKKMNRRVE 62 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g---~~dp~~l~~~l~kk~Gk~a~ 62 (96)
.|+| +|+|.+|+.+|+++|.+++||.++.+|+..++++|.. ..++..|.++|. .+||.+.
T Consensus 6 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~ 69 (71)
T 2ldi_A 6 QMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIA-ALGYTLA 69 (71)
T ss_dssp EEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHH-TTTCEEE
T ss_pred EEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCcc
Confidence 4677 6999999999999999999999999999999999974 356788999999 9999764
No 34
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=99.23 E-value=8.5e-11 Score=72.72 Aligned_cols=64 Identities=11% Similarity=0.163 Sum_probs=57.1
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEee---CCHHHHHHHHHHhcCCcEEEeec
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGR---FRPSDVAIKIRKKMNRRVEILEI 66 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~---~dp~~l~~~l~kk~Gk~a~i~~~ 66 (96)
.|.| +|+|.+|+.+|+++|..++||.++.+|+..++++|..+ +++..|.++|. .+||.+.++..
T Consensus 19 ~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~ 86 (95)
T 2kkh_A 19 YFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALN-EARLEANVRVN 86 (95)
T ss_dssp EEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCCEEESCC
T ss_pred EEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HcCCceEEecC
Confidence 4777 79999999999999999999999999999999999854 47888999999 99999877654
No 35
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=99.19 E-value=1e-10 Score=75.07 Aligned_cols=62 Identities=16% Similarity=0.281 Sum_probs=55.5
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEee---CCHHHHHHHHHHhcCCcEEEe
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGR---FRPSDVAIKIRKKMNRRVEIL 64 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~---~dp~~l~~~l~kk~Gk~a~i~ 64 (96)
+|+| +|+|.+|+.+|+++|.+++||.++.+|+..++++|..+ .++..|.++|. .+||.+...
T Consensus 11 ~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~-~~Gy~~~~~ 76 (111)
T 2ofg_X 11 QMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIA-ALGYTLAEP 76 (111)
T ss_dssp EEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHHH-TTTCCEECC
T ss_pred EEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHHH-HcCCeeeec
Confidence 5788 79999999999999999999999999999999999754 57788999999 999987654
No 36
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=99.16 E-value=1.1e-10 Score=81.16 Aligned_cols=64 Identities=11% Similarity=0.330 Sum_probs=56.8
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEe---eCCHHHHHHHHHHhcCCcEEEeec
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCG---RFRPSDVAIKIRKKMNRRVEILEI 66 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g---~~dp~~l~~~l~kk~Gk~a~i~~~ 66 (96)
.|+| +|+|.+|+.+|+++|.+++||.++.+|+..++++|.. .+++..|.++|. .+||.+.++..
T Consensus 125 ~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~ 192 (202)
T 2rop_A 125 LIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIE-DMGFEASVVSE 192 (202)
T ss_dssp EEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTSCEEEC--
T ss_pred EEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HcCCceEEcCC
Confidence 4777 7999999999999999999999999999999999974 357889999999 99999988754
No 37
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=99.16 E-value=4.6e-11 Score=69.51 Aligned_cols=58 Identities=16% Similarity=0.397 Sum_probs=49.7
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEeeCCHHHHHHHHHHhcCCcEEEe
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGRFRPSDVAIKIRKKMNRRVEIL 64 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~~dp~~l~~~l~kk~Gk~a~i~ 64 (96)
+|.| +|+|.+|+.+|+++|.+++||.++.+|+..++++|.+..+ .+.|. .+||.+.+.
T Consensus 6 ~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~-~~Gy~~~~~ 64 (71)
T 2aj0_A 6 VYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVE-QAGAFEHLK 64 (71)
T ss_dssp EEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHH-HHHTTTTCE
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHH-HhCCCcccc
Confidence 4777 6999999999999999999999999999999999997765 45677 888865443
No 38
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.05 E-value=6.7e-10 Score=72.40 Aligned_cols=63 Identities=16% Similarity=0.350 Sum_probs=56.1
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEe---eCCHHHHHHHHHHhcCCcEEEee
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCG---RFRPSDVAIKIRKKMNRRVEILE 65 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g---~~dp~~l~~~l~kk~Gk~a~i~~ 65 (96)
+|.| +|+|.+|+.+|+++|.+++||.++.+|+..++++|.. ..++..|.++|+ ..||.+.++.
T Consensus 7 ~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~~ 73 (149)
T 2ew9_A 7 FLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQ-DLGFEAAVME 73 (149)
T ss_dssp EEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCEEEECS
T ss_pred EEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHh-cCCCceEeec
Confidence 5777 8999999999999999999999999999999999974 357789999999 8999887653
No 39
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.80 E-value=1.3e-08 Score=70.55 Aligned_cols=62 Identities=15% Similarity=0.283 Sum_probs=52.9
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEee---CCHHHHHHHHHHhc---CCcEEEe
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGR---FRPSDVAIKIRKKM---NRRVEIL 64 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~---~dp~~l~~~l~kk~---Gk~a~i~ 64 (96)
+|+| +|+|.+|+.+|+++|.+++||.++.+|+..++++|..+ +++..|.++|+ .+ ||.+.+.
T Consensus 23 ~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~~~gg~~v~~~ 91 (202)
T 2rop_A 23 QLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIE-ALPPGNFKVSLP 91 (202)
T ss_dssp EEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHT-TSSSSCSEEEC-
T ss_pred EEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HhccCCeEEEec
Confidence 4777 79999999999999999999999999999999999753 57888999998 76 4666433
No 40
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.77 E-value=2.5e-08 Score=65.19 Aligned_cols=59 Identities=19% Similarity=0.335 Sum_probs=51.8
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEe---eCCHHHHHHHHHHhcCCcE
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCG---RFRPSDVAIKIRKKMNRRV 61 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g---~~dp~~l~~~l~kk~Gk~a 61 (96)
.|.| +|+|.+|+.+|++.|.+++||.++.+|+..++++|.. ..++..+.++|+ .+||.+
T Consensus 9 ~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~ 71 (151)
T 1p6t_A 9 AMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE-KLGYHV 71 (151)
T ss_dssp EEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHH-HHTCEE
T ss_pred EEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHH-HcCCcc
Confidence 3667 6999999999999999999999999999999999863 357888999998 889865
No 41
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.71 E-value=3.6e-08 Score=80.92 Aligned_cols=60 Identities=12% Similarity=0.221 Sum_probs=54.9
Q ss_pred EEEE-eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEe---eCCHHHHHHHHHHhcCCcEE
Q 034383 2 VMRI-NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCG---RFRPSDVAIKIRKKMNRRVE 62 (96)
Q Consensus 2 vlkV-~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g---~~dp~~l~~~l~kk~Gk~a~ 62 (96)
+|+| +|+|.+|+.+|+++|.+++||.++++|+.+++++|.. ..+++.|.++|+ +.||++.
T Consensus 5 ~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~-~~Gy~~~ 68 (723)
T 3j09_A 5 TVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIE-DLGYGVV 68 (723)
T ss_dssp EEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHCCEES
T ss_pred EEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHH-hcCCccc
Confidence 5777 7999999999999999999999999999999999974 368999999999 9999874
No 42
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=92.54 E-value=0.49 Score=30.29 Aligned_cols=46 Identities=11% Similarity=0.227 Sum_probs=34.3
Q ss_pred HHHHHHhcCCCceEEE-----EEcCCC--EEEEEee-CCHHHHHHHHHHhcCCcE
Q 034383 15 KLRRILLNMKEIEAHL-----IEKQQC--RVSVCGR-FRPSDVAIKIRKKMNRRV 61 (96)
Q Consensus 15 kI~k~L~~l~GV~~v~-----vD~~~~--~VtV~g~-~dp~~l~~~l~kk~Gk~a 61 (96)
.+-+.|++++||..|. +|.+.. ++||+|. +|.+.|.++|+ +.|--+
T Consensus 23 dlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE-~~GgvI 76 (100)
T 3bpd_A 23 VFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIE-DMGGVI 76 (100)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHH-TTTCEE
T ss_pred HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHH-HcCCeE
Confidence 4567899999988664 344433 3677786 99999999999 787544
No 43
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=91.82 E-value=0.77 Score=29.20 Aligned_cols=47 Identities=9% Similarity=0.177 Sum_probs=34.8
Q ss_pred HHHHHHhcCCCceEEE-----EEcCCC--EEEEEee-CCHHHHHHHHHHhcCCcEE
Q 034383 15 KLRRILLNMKEIEAHL-----IEKQQC--RVSVCGR-FRPSDVAIKIRKKMNRRVE 62 (96)
Q Consensus 15 kI~k~L~~l~GV~~v~-----vD~~~~--~VtV~g~-~dp~~l~~~l~kk~Gk~a~ 62 (96)
.+-+.|++++||..|. +|.+.. ++||+|. +|.+.|.++|+ +.|--+.
T Consensus 22 d~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE-~~Gg~IH 76 (96)
T 2x3d_A 22 DLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLE-EEGCAIH 76 (96)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHH-HTTCEEE
T ss_pred HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHH-HcCCeEE
Confidence 4667899999988664 344333 3677786 99999999999 8875443
No 44
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=91.58 E-value=0.47 Score=30.25 Aligned_cols=47 Identities=15% Similarity=0.304 Sum_probs=34.7
Q ss_pred HHHHHHhcCCCceEEE-----EEcCCCE--EEEEee-CCHHHHHHHHHHhcCCcEE
Q 034383 15 KLRRILLNMKEIEAHL-----IEKQQCR--VSVCGR-FRPSDVAIKIRKKMNRRVE 62 (96)
Q Consensus 15 kI~k~L~~l~GV~~v~-----vD~~~~~--VtV~g~-~dp~~l~~~l~kk~Gk~a~ 62 (96)
.+-+.|++++||..|. +|.+... +||+|. +|.+.|.++|+ +.|--+.
T Consensus 23 d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE-~~Gg~IH 77 (97)
T 2raq_A 23 EYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIE-SYGGSIH 77 (97)
T ss_dssp HHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHH-HTTCEEE
T ss_pred HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHH-HcCCeEE
Confidence 4567889999987654 4554443 667786 99999999999 8875443
No 45
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=83.90 E-value=0.94 Score=28.49 Aligned_cols=32 Identities=16% Similarity=0.470 Sum_probs=24.8
Q ss_pred EEEeccchhh------HHHHHHHH-hcCCCceEEEEEcC
Q 034383 3 MRINLDCNGC------CRKLRRIL-LNMKEIEAHLIEKQ 34 (96)
Q Consensus 3 lkV~M~C~~C------~~kI~k~L-~~l~GV~~v~vD~~ 34 (96)
+.+-++..+| ...|+.+| ..++||.+|++++.
T Consensus 48 V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l~ 86 (108)
T 3lno_A 48 ITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNVV 86 (108)
T ss_dssp EEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEEC
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEEE
Confidence 4556667777 66789999 89999999988654
No 46
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=83.55 E-value=1.5 Score=27.15 Aligned_cols=32 Identities=25% Similarity=0.477 Sum_probs=24.6
Q ss_pred EEEeccchhh------HHHHHHHHhcCCCceEEEEEcC
Q 034383 3 MRINLDCNGC------CRKLRRILLNMKEIEAHLIEKQ 34 (96)
Q Consensus 3 lkV~M~C~~C------~~kI~k~L~~l~GV~~v~vD~~ 34 (96)
+.+.+++.+| ...|+.+|..++||.+|++++.
T Consensus 45 v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l~ 82 (103)
T 3cq1_A 45 VRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVT 82 (103)
T ss_dssp EEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEEC
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEe
Confidence 4556667666 4678999999999999988753
No 47
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=79.80 E-value=2.5 Score=26.09 Aligned_cols=51 Identities=10% Similarity=0.231 Sum_probs=31.1
Q ss_pred EEEeccchhh------HHHHHHHHhcCCCceEEEEEcCCCEEEEEeeCCHHHHHHHHHHhcC
Q 034383 3 MRINLDCNGC------CRKLRRILLNMKEIEAHLIEKQQCRVSVCGRFRPSDVAIKIRKKMN 58 (96)
Q Consensus 3 lkV~M~C~~C------~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~~dp~~l~~~l~kk~G 58 (96)
+.+.++..+| ...|+.+|..++||.+|++++.. .-..+++.+-+.-|.++|
T Consensus 46 v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~v~V~l~~-----~p~W~~~~~s~~~r~~lg 102 (103)
T 1uwd_A 46 VLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELTF-----DPPWTPERMSPELREKFG 102 (103)
T ss_dssp EEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEECC-----SSCCCGGGSCHHHHHHHT
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHHhCCCcceEEEEEec-----CCCCChHHCCHHHHHHcC
Confidence 4455555555 35688899999999999887432 223445554444443444
No 48
>2nyt_A Probable C->U-editing enzyme apobec-2; cytidine deaminase, zinc-ION binding, hydrolase; 2.50A {Homo sapiens} PDB: 2rpz_A
Probab=78.36 E-value=5.6 Score=27.69 Aligned_cols=60 Identities=13% Similarity=0.292 Sum_probs=40.9
Q ss_pred EEEEecc-chhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEeeCCH--HHHHHHHHHhcCCcEEEeecc
Q 034383 2 VMRINLD-CNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGRFRP--SDVAIKIRKKMNRRVEILEIQ 67 (96)
Q Consensus 2 vlkV~M~-C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~~dp--~~l~~~l~kk~Gk~a~i~~~~ 67 (96)
+|-|.+. |..|+..|-.+|..-+||..|-+-... -+.-+| ..-++.|+ +.|-.++++..+
T Consensus 86 TlYvTlePC~~Ca~aIi~al~~~~gI~rVV~~~~d-----~~~~~p~~~~g~~~L~-~aGI~V~~~~~~ 148 (190)
T 2nyt_A 86 TWYVSSSPCAACADRIIKTLSKTKNLRLLILVGRL-----FMWEEPEIQAALKKLK-EAGCKLRIMKPQ 148 (190)
T ss_pred EEEEEcChHHHHHHHHHHhhhhcCCccEEEEEeec-----CCcCChHHHHHHHHHH-HCCCEEEEecHH
Confidence 4556555 999999999999999999877652210 000123 34567777 899988887654
No 49
>2cpq_A FragIle X mental retardation syndrome related protein 1, isoform B'; KH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=66.45 E-value=20 Score=22.07 Aligned_cols=37 Identities=8% Similarity=0.031 Sum_probs=27.3
Q ss_pred HHHHhcCCCceEEEEEcCCCEEEEEeeCCHHHHHHHHH
Q 034383 17 RRILLNMKEIEAHLIEKQQCRVSVCGRFRPSDVAIKIR 54 (96)
Q Consensus 17 ~k~L~~l~GV~~v~vD~~~~~VtV~g~~dp~~l~~~l~ 54 (96)
-+.+....|+.+++++-++++|+|.| .+.+.+.+|..
T Consensus 37 Ik~I~e~tGv~~IdI~eddG~V~I~g-~~~ea~~~A~~ 73 (91)
T 2cpq_A 37 IQQARKVPGVTAIELDEDTGTFRIYG-ESADAVKKARG 73 (91)
T ss_dssp HHHHHTSTTEEEEEEETTTTEEEEEE-SSHHHHHHHHH
T ss_pred HHHHHHHhCCeEEEEEcCCCEEEEEE-CCHHHHHHHHH
Confidence 34466667997799987779999997 46666666655
No 50
>3pro_C Alpha-lytic protease; Pro region, foldase, protein folding, serine protease, hydro hydrolase inhibitor complex; HET: AES; 1.80A {Lysobacter enzymogenes} SCOP: d.52.1.1 d.52.1.1 PDB: 2pro_A* 4pro_C
Probab=55.41 E-value=33 Score=23.31 Aligned_cols=36 Identities=6% Similarity=0.020 Sum_probs=25.7
Q ss_pred CCCceEEEEEcCCCEEEEEeeC-CHHHHHHHHHHhcCC
Q 034383 23 MKEIEAHLIEKQQCRVSVCGRF-RPSDVAIKIRKKMNR 59 (96)
Q Consensus 23 l~GV~~v~vD~~~~~VtV~g~~-dp~~l~~~l~kk~Gk 59 (96)
-.||.++.||..+++|+|+..- .+... ++|.+..|-
T Consensus 113 ~~~v~~W~VD~~tN~VVV~a~~~~~~aa-~~f~~~AG~ 149 (166)
T 3pro_C 113 LDGVQSWYVDPRSNAVVVKVDDGATDAG-VDFVALSGA 149 (166)
T ss_dssp CTTEEEEEEEGGGTEEEEEEETTCHHHH-HHHHHHHTC
T ss_pred CCCCceEEEeCCCCeEEEEeCCCChHHH-HHHHHHhCC
Confidence 3578899999999999998652 34444 455547774
No 51
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=55.21 E-value=28 Score=20.13 Aligned_cols=43 Identities=16% Similarity=0.110 Sum_probs=29.8
Q ss_pred EeccchhhH-----HHHHHHHhcCCCceEEEEEcCCCEEEEEeeCCHHHHHHHHHHhcC
Q 034383 5 INLDCNGCC-----RKLRRILLNMKEIEAHLIEKQQCRVSVCGRFRPSDVAIKIRKKMN 58 (96)
Q Consensus 5 V~M~C~~C~-----~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~~dp~~l~~~l~kk~G 58 (96)
..-.|..|. .++++.|... ||.-..+|...+ + ...+.|++.+|
T Consensus 8 ~~~~C~~c~~~~~~~~ak~~L~~~-~i~~~~~di~~~---------~-~~~~~l~~~~g 55 (93)
T 1t1v_A 8 STSVTGSREIKSQQSEVTRILDGK-RIQYQLVDISQD---------N-ALRDEMRTLAG 55 (93)
T ss_dssp ECSSCSCHHHHHHHHHHHHHHHHT-TCCCEEEETTSC---------H-HHHHHHHHHTT
T ss_pred EcCCCCCchhhHHHHHHHHHHHHC-CCceEEEECCCC---------H-HHHHHHHHHhC
Confidence 345699997 8899989875 777666776542 3 45566665666
No 52
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=54.52 E-value=8.6 Score=25.35 Aligned_cols=33 Identities=18% Similarity=0.236 Sum_probs=27.6
Q ss_pred CCEEEEEeeCCHHHHHHHHHHh-cCCcEEEeeccC
Q 034383 35 QCRVSVCGRFRPSDVAIKIRKK-MNRRVEILEIQE 68 (96)
Q Consensus 35 ~~~VtV~g~~dp~~l~~~l~kk-~Gk~a~i~~~~~ 68 (96)
..-|.|+|+-|-.-++++|+ + .|+++.++.++.
T Consensus 110 d~~vLvSgD~DF~plv~~lr-~~~G~~V~v~g~~~ 143 (165)
T 2qip_A 110 DRVILVSGDGDFSLLVERIQ-QRYNKKVTVYGVPR 143 (165)
T ss_dssp SEEEEECCCGGGHHHHHHHH-HHHCCEEEEEECGG
T ss_pred CEEEEEECChhHHHHHHHHH-HHcCcEEEEEeCCC
Confidence 44577889999999999999 6 599999998743
No 53
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=49.93 E-value=42 Score=20.53 Aligned_cols=43 Identities=9% Similarity=0.022 Sum_probs=29.9
Q ss_pred hHHHHHHHHhcCCCceEEEEEcCCCEEEEEee-CCHHHHHHHHH
Q 034383 12 CCRKLRRILLNMKEIEAHLIEKQQCRVSVCGR-FRPSDVAIKIR 54 (96)
Q Consensus 12 C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~-~dp~~l~~~l~ 54 (96)
=...|..+|.+++|++-..+|.+.+++.|+=. -+...+.+.|.
T Consensus 18 ~~~~V~~~L~~ipgvEi~~~~~~~GkiVV~iEa~~~~~l~~~i~ 61 (95)
T 2jsx_A 18 RISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIE 61 (95)
T ss_dssp SHHHHHHHHTTSTTEEEEEEETTTTEEEEEEEESSHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCeEEEEecCCCCCEEEEEEeCCHHHHHHHHH
Confidence 36789999999999954456777888777632 34555555554
No 54
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=46.06 E-value=20 Score=21.09 Aligned_cols=25 Identities=8% Similarity=0.314 Sum_probs=20.3
Q ss_pred cCCCc--eEEEEEcCCCEEEEEeeCCH
Q 034383 22 NMKEI--EAHLIEKQQCRVSVCGRFRP 46 (96)
Q Consensus 22 ~l~GV--~~v~vD~~~~~VtV~g~~dp 46 (96)
.++|+ +++++....+.++|.|....
T Consensus 14 dlPG~~~edi~V~v~~~~L~I~g~~~~ 40 (85)
T 3q9p_A 14 DVNHFAPDELTVKTKDGVVEITGKHAA 40 (85)
T ss_dssp ECTTTCCSEEEEEEETTEEEEEEEEC-
T ss_pred ECCCCChHHEEEEEECCEEEEEEEEcc
Confidence 57888 58999999999999997543
No 55
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=45.19 E-value=47 Score=19.75 Aligned_cols=49 Identities=16% Similarity=0.133 Sum_probs=35.0
Q ss_pred eccchhhHHHHHHHHhcCC--CceEEEEEcCCCEEEEEee--CCHHHHHHHHHHhcCCcEEEee
Q 034383 6 NLDCNGCCRKLRRILLNMK--EIEAHLIEKQQCRVSVCGR--FRPSDVAIKIRKKMNRRVEILE 65 (96)
Q Consensus 6 ~M~C~~C~~kI~k~L~~l~--GV~~v~vD~~~~~VtV~g~--~dp~~l~~~l~kk~Gk~a~i~~ 65 (96)
|+.|..=.-+++++|..++ | +.+.|..+ .....|...++ ..|+.+....
T Consensus 8 Gl~CP~Pvl~~kkal~~l~~~G----------~~L~V~~dd~~a~~dI~~~~~-~~G~~v~~~~ 60 (87)
T 3hz7_A 8 GQVCPIPVIRAKKALAELGEAG----------GVVTVLVDNDISRQNLQKMAE-GMGYQSEYLE 60 (87)
T ss_dssp TCCTTHHHHHHHHHHHTTGGGC----------CEEEEEESSHHHHHHHHHHHH-HHTCEEEEEE
T ss_pred CCCCCHHHHHHHHHHHhccCCC----------CEEEEEECCccHHHHHHHHHH-HCCCEEEEEE
Confidence 7889999999999999883 4 23444432 23457777777 9999886654
No 56
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=44.68 E-value=10 Score=24.50 Aligned_cols=28 Identities=11% Similarity=0.129 Sum_probs=19.7
Q ss_pred eEEEEEcCCCEEEEEeeCCHHHHHHHHH
Q 034383 27 EAHLIEKQQCRVSVCGRFRPSDVAIKIR 54 (96)
Q Consensus 27 ~~v~vD~~~~~VtV~g~~dp~~l~~~l~ 54 (96)
..+++..+.+.||++|.++...-.+.++
T Consensus 77 ~~i~V~V~~g~VtLsG~v~s~~~r~~a~ 104 (132)
T 2kgs_A 77 PDFGLKVERDTVTLTGTAPSSEHKDAVK 104 (132)
T ss_dssp TTCEEEEEETEEEEECEESSHHHHHHHH
T ss_pred CceEEEEECCEEEEEEEECCHHHHHHHH
Confidence 4667777899999999987654443333
No 57
>2hiy_A Hypothetical protein; COG3797, structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GOL; 1.40A {Streptococcus pneumoniae} SCOP: d.356.1.1
Probab=42.74 E-value=63 Score=21.89 Aligned_cols=50 Identities=10% Similarity=-0.043 Sum_probs=37.7
Q ss_pred HHHHHHHhcCCCceEEEEEcCCCEEEEEeeCCHHHHH----HHHHHhcCCcEEEe
Q 034383 14 RKLRRILLNMKEIEAHLIEKQQCRVSVCGRFRPSDVA----IKIRKKMNRRVEIL 64 (96)
Q Consensus 14 ~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~~dp~~l~----~~l~kk~Gk~a~i~ 64 (96)
...+..|..+ |-.+|..=+.+|-|.+.+..+++.|. ++|++..|+++.++
T Consensus 25 adLr~~l~~l-Gf~~V~TyI~SGNvvF~s~~~~~~l~~~ie~~l~~~fg~~v~v~ 78 (183)
T 2hiy_A 25 AELRQELTNL-GLEKVESYINSGNIFFTSIDSKAQLVEKLETFFAVHYPFIQSFS 78 (183)
T ss_dssp HHHHHHHHHH-TCEEEEEETTTTEEEEEECSCHHHHHHHHHHHHHHHCTTCCCCE
T ss_pred HHHHHHHHHc-CCccceEEEecCCEEEecCCCHHHHHHHHHHHHHHhcCCCCCEE
Confidence 3567777777 88999999999999999877766554 45556788876443
No 58
>4e6k_G BFD, bacterioferritin-associated ferredoxin; protein complex, iron storage, iron binding, iron mobilizati ferritin, iron homeostasis; HET: HEM; 2.00A {Pseudomonas aeruginosa}
Probab=40.21 E-value=7.3 Score=23.03 Aligned_cols=20 Identities=10% Similarity=0.478 Sum_probs=16.6
Q ss_pred EEeccchhhHHHHHHHHhcC
Q 034383 4 RINLDCNGCCRKLRRILLNM 23 (96)
Q Consensus 4 kV~M~C~~C~~kI~k~L~~l 23 (96)
+.++.|+.|...|++.|...
T Consensus 33 ~aGt~CG~C~~~i~~il~~~ 52 (73)
T 4e6k_G 33 GVGTQCGKCASLAKQVVRET 52 (73)
T ss_dssp CTTSSSCTTHHHHHHHHHHH
T ss_pred CCCCCCCchHHHHHHHHHHH
Confidence 45788999999999998753
No 59
>2k1h_A Uncharacterized protein Ser13; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Staphylococcus epidermidis}
Probab=39.07 E-value=43 Score=20.62 Aligned_cols=37 Identities=8% Similarity=0.074 Sum_probs=28.7
Q ss_pred HHHHHhcCCCceEEEEEcCCCEEEEE--eeCCHHHHHHHHH
Q 034383 16 LRRILLNMKEIEAHLIEKQQCRVSVC--GRFRPSDVAIKIR 54 (96)
Q Consensus 16 I~k~L~~l~GV~~v~vD~~~~~VtV~--g~~dp~~l~~~l~ 54 (96)
.-+.|-+++||.+|-+. .+-|||+ ..++++.|.-.|.
T Consensus 41 LA~~LF~i~gVk~Vf~g--~dFITVtK~~~~dW~~ikp~I~ 79 (94)
T 2k1h_A 41 FINRLFEIEGVKSIFYV--LDFISIDKEDNANWNELLPQIE 79 (94)
T ss_dssp HHHHHHTSTTEEEEEEE--TTEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHhhCCCCeeEEEEe--CCEEEEecCCCCCHHHHHHHHH
Confidence 44567789999998876 5588887 4588998887776
No 60
>2e9h_A EIF-5, eukaryotic translation initiation factor 5; zinc binding, C4 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.86 E-value=43 Score=22.66 Aligned_cols=27 Identities=11% Similarity=0.121 Sum_probs=23.8
Q ss_pred EEEEEcCCCEEEEEeeCCHHHHHHHHH
Q 034383 28 AHLIEKQQCRVSVCGRFRPSDVAIKIR 54 (96)
Q Consensus 28 ~v~vD~~~~~VtV~g~~dp~~l~~~l~ 54 (96)
.-.+|..+++++|.|.+++..|.+.|+
T Consensus 71 ~g~id~~~~rlii~G~~~~~~i~~~L~ 97 (157)
T 2e9h_A 71 QTQFDVKNDRYIVNGSHEANKLQDMLD 97 (157)
T ss_dssp CEEEETTTTEEEEEBCCCHHHHHHHHH
T ss_pred ceeecCCCCEEEEEeeeCHHHHHHHHH
Confidence 346888899999999999999998887
No 61
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=37.61 E-value=54 Score=18.26 Aligned_cols=8 Identities=25% Similarity=0.397 Sum_probs=3.5
Q ss_pred HHHHHHHH
Q 034383 47 SDVAIKIR 54 (96)
Q Consensus 47 ~~l~~~l~ 54 (96)
..++++|+
T Consensus 60 ~~l~~~L~ 67 (88)
T 2ko1_A 60 TTLMDKLR 67 (88)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 34444444
No 62
>2yy3_A Elongation factor 1-beta; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 2.50A {Pyrococcus horikoshii}
Probab=36.94 E-value=26 Score=21.61 Aligned_cols=21 Identities=10% Similarity=0.230 Sum_probs=18.6
Q ss_pred HHHHHHHHhcCCCceEEEEEc
Q 034383 13 CRKLRRILLNMKEIEAHLIEK 33 (96)
Q Consensus 13 ~~kI~k~L~~l~GV~~v~vD~ 33 (96)
...+..+++.++||+|+++..
T Consensus 67 tD~lee~i~~~e~VqSvdV~~ 87 (91)
T 2yy3_A 67 FDEVAEKFEEVENVESAEVET 87 (91)
T ss_dssp HHHHHHHHHHSTTEEEEEEEE
T ss_pred cHHHHHHHhcCCCceEEEEEE
Confidence 788999999999999998753
No 63
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.81 E-value=53 Score=19.82 Aligned_cols=29 Identities=14% Similarity=0.037 Sum_probs=22.3
Q ss_pred eccchhhHH-----HHHHHHhcCCCceEEEEEcCC
Q 034383 6 NLDCNGCCR-----KLRRILLNMKEIEAHLIEKQQ 35 (96)
Q Consensus 6 ~M~C~~C~~-----kI~k~L~~l~GV~~v~vD~~~ 35 (96)
--.|..|.. ++++.|... ||.-..+|...
T Consensus 15 ~~~C~~C~~~~~~~~ak~~L~~~-gi~y~~vdI~~ 48 (111)
T 2ct6_A 15 ASSSGFVAIKKKQQDVVRFLEAN-KIEFEEVDITM 48 (111)
T ss_dssp CSSCSCHHHHHHHHHHHHHHHHT-TCCEEEEETTT
T ss_pred cCCCCCcccchhHHHHHHHHHHc-CCCEEEEECCC
Confidence 456999996 899999875 78766777764
No 64
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=34.57 E-value=27 Score=20.59 Aligned_cols=23 Identities=17% Similarity=0.254 Sum_probs=18.8
Q ss_pred cCCCc--eEEEEEcCCCEEEEEeeC
Q 034383 22 NMKEI--EAHLIEKQQCRVSVCGRF 44 (96)
Q Consensus 22 ~l~GV--~~v~vD~~~~~VtV~g~~ 44 (96)
.|+|+ +++++.+..+.++|.|..
T Consensus 13 dlPG~~~edi~V~v~~~~L~I~g~~ 37 (90)
T 2y1y_A 13 DVKHFSPEELKVKVLGDVIEVHGKH 37 (90)
T ss_dssp ECTTSCGGGEEEEEETTEEEEEEEE
T ss_pred ECCCCcHHHeEEEEECCEEEEEEEE
Confidence 57887 468888889999999864
No 65
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=33.99 E-value=56 Score=18.13 Aligned_cols=26 Identities=15% Similarity=0.270 Sum_probs=18.7
Q ss_pred EEEeccchhhHHHHHHHHhcCCCceEEEEEc
Q 034383 3 MRINLDCNGCCRKLRRILLNMKEIEAHLIEK 33 (96)
Q Consensus 3 lkV~M~C~~C~~kI~k~L~~l~GV~~v~vD~ 33 (96)
+.+.|+... + +.|.+.+||..|+-|.
T Consensus 35 ~~~~lp~~~----~-~~L~~~p~V~yVE~D~ 60 (65)
T 2z30_B 35 VVVDVPANA----V-GKLKKMPGVEKVEFDH 60 (65)
T ss_dssp EEEEECGGG----H-HHHHTSTTEEEEEECC
T ss_pred EEEEeCHHH----H-HHHhcCCCceEEecCc
Confidence 445666655 3 4688999999998874
No 66
>4dx5_A Acriflavine resistance protein B; multidrug efflux protein, membrane protein, transpor; HET: LMT OCT D10 HEX D12 MIY C14 LMU DD9 UND GOL; 1.90A {Escherichia coli} PDB: 2hrt_A* 2gif_A* 4dx7_A* 4dx6_A* 3noc_A* 1oy6_A* 1oy9_A* 1oyd_A* 1oy8_A* 1oye_A 2rdd_A* 2w1b_A* 3d9b_A 2i6w_A* 3nog_A* 1t9x_A* 1t9t_A* 1t9v_A* 1t9w_A* 1t9u_A* ...
Probab=33.85 E-value=43 Score=28.21 Aligned_cols=43 Identities=12% Similarity=0.185 Sum_probs=32.2
Q ss_pred HHHHHHHHhcCCCceEEEEEcCCCEEEEE--------eeCCHHHHHHHHHH
Q 034383 13 CRKLRRILLNMKEIEAHLIEKQQCRVSVC--------GRFRPSDVAIKIRK 55 (96)
Q Consensus 13 ~~kI~k~L~~l~GV~~v~vD~~~~~VtV~--------g~~dp~~l~~~l~k 55 (96)
...|+..|.+++||.+|++......+.|. -.+++.+|.++|+.
T Consensus 159 ~~~i~~~l~~i~gv~~v~~~g~~~~i~i~~d~~~l~~~glt~~~v~~~l~~ 209 (1057)
T 4dx5_A 159 AANMKDAISRTSGVGDVQLFGSQYAMRIWMNPNELNKFQLTPVDVITAIKA 209 (1057)
T ss_dssp HHHTHHHHHTSTTEEEEEESSCCEEEEEEECHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCceEEEecCCcEEEEEEeCHHHHHHcCCCHHHHHHHHHH
Confidence 36899999999999999986663345554 13567778889983
No 67
>4ar0_A Type IV pilus biogenesis and competence protein P; transport, secretin type II secretion system; NMR {Neisseria meningitidis}
Probab=33.61 E-value=93 Score=19.80 Aligned_cols=49 Identities=8% Similarity=0.047 Sum_probs=35.7
Q ss_pred HHHHHHHHhcCCCceEEEEEc-CCCEEEEEe-eCCHHHHHHHHHHhcCCcEE
Q 034383 13 CRKLRRILLNMKEIEAHLIEK-QQCRVSVCG-RFRPSDVAIKIRKKMNRRVE 62 (96)
Q Consensus 13 ~~kI~k~L~~l~GV~~v~vD~-~~~~VtV~g-~~dp~~l~~~l~kk~Gk~a~ 62 (96)
.+.+-+.|++..|.. +-+|. -+++||+.- .+++..++..|-+-.|+.+.
T Consensus 43 i~~vl~~la~~tg~N-iV~d~~V~G~VTl~l~~v~~~~al~~iL~~~gl~~~ 93 (128)
T 4ar0_A 43 IRTILQILAKESGMN-IVASDSVNGKMTLSLKDVPWDQALDLVMQARNLDMR 93 (128)
T ss_dssp HHHHHHHHHHTTCCE-EEECTTCCCEEEEEEEEEEHHHHHHHHHHHHTEEEE
T ss_pred HHHHHHHHHHHHCCc-EEEcCCCCceeeEeecCCCHHHHHHHHHHHcCceEE
Confidence 456778899999974 44444 688999863 57888888888767777553
No 68
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=33.60 E-value=87 Score=19.44 Aligned_cols=47 Identities=13% Similarity=0.229 Sum_probs=28.3
Q ss_pred EeccchhhHHHHHHHHhcCCC---ceEEEEEcCCCEEEEEeeCCHHHHHHHHHHhcCC
Q 034383 5 INLDCNGCCRKLRRILLNMKE---IEAHLIEKQQCRVSVCGRFRPSDVAIKIRKKMNR 59 (96)
Q Consensus 5 V~M~C~~C~~kI~k~L~~l~G---V~~v~vD~~~~~VtV~g~~dp~~l~~~l~kk~Gk 59 (96)
..-.|..|.+.++..|..+ | +.-..+|.... -+...+.+.|.+.+|.
T Consensus 43 ~~~~Cp~C~~a~k~~L~~~-~~~~i~~~~vdvd~~-------~~~~~~~~~L~~~~g~ 92 (129)
T 3ctg_A 43 AKTYCPYCKATLSTLFQEL-NVPKSKALVLELDEM-------SNGSEIQDALEEISGQ 92 (129)
T ss_dssp ECTTCHHHHHHHHHHHTTS-CCCGGGEEEEEGGGS-------TTHHHHHHHHHHHHSC
T ss_pred ECCCCCchHHHHHHHHHhc-CccCCCcEEEEcccc-------CCHHHHHHHHHHHhCC
Confidence 3456999998779989876 4 54333443221 1234566666656664
No 69
>1gh8_A Translation elongation factor 1BETA; alpha-beta sandwich, gene regulation, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.58.12.1
Probab=33.58 E-value=31 Score=21.15 Aligned_cols=23 Identities=9% Similarity=0.127 Sum_probs=19.0
Q ss_pred hhHHHHHHHHhcCCCceEEEEEc
Q 034383 11 GCCRKLRRILLNMKEIEAHLIEK 33 (96)
Q Consensus 11 ~C~~kI~k~L~~l~GV~~v~vD~ 33 (96)
+=...+...++.++||+|+++-.
T Consensus 62 ~~td~lee~i~~~e~Vqsvdv~~ 84 (89)
T 1gh8_A 62 GGTEAAEESLSGIEGVSNIEVTD 84 (89)
T ss_dssp GGGGHHHHHHTTSCSSEEEEEEE
T ss_pred cChHHHHHHHhccCCccEEEEEE
Confidence 44678899999999999998753
No 70
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=33.08 E-value=29 Score=21.04 Aligned_cols=23 Identities=22% Similarity=0.234 Sum_probs=19.0
Q ss_pred cCCCc--eEEEEEcCCCEEEEEeeC
Q 034383 22 NMKEI--EAHLIEKQQCRVSVCGRF 44 (96)
Q Consensus 22 ~l~GV--~~v~vD~~~~~VtV~g~~ 44 (96)
.|+|+ +++++++..+.++|.|..
T Consensus 18 dlPG~~~edI~V~v~~~~L~I~g~~ 42 (101)
T 2wj5_A 18 DVKHFSPEEISVKVVGDHVEVHARH 42 (101)
T ss_dssp ECTTSCGGGEEEEEETTEEEEEEEE
T ss_pred ECCCCcHHHeEEEEECCEEEEEEEE
Confidence 57887 468888889999999864
No 71
>2v50_A Multidrug resistance protein MEXB; DDM, RND, membrane, detergent, transport, cell membrane, transmembrane, membrane protein; HET: LMT; 3.00A {Pseudomonas aeruginosa PA01}
Probab=32.24 E-value=41 Score=28.37 Aligned_cols=43 Identities=16% Similarity=0.230 Sum_probs=32.5
Q ss_pred HHHHHHHHhcCCCceEEEEEcCCCEEEEE--------eeCCHHHHHHHHHH
Q 034383 13 CRKLRRILLNMKEIEAHLIEKQQCRVSVC--------GRFRPSDVAIKIRK 55 (96)
Q Consensus 13 ~~kI~k~L~~l~GV~~v~vD~~~~~VtV~--------g~~dp~~l~~~l~k 55 (96)
++.|+..|.+++||.+|.++.....+.|. -.+++.+|.++|+.
T Consensus 159 ~~~i~~~L~~i~gv~~v~~~g~~~~i~i~id~~kl~~~Gls~~~v~~~l~~ 209 (1052)
T 2v50_A 159 VSNIQDPLSRTKGVGDFQVFGSQYSMRIWLDPAKLNSYQLTPGDVSSAIQA 209 (1052)
T ss_dssp HHHTHHHHHTSTTEEEEEESSCCEEEEEEECHHHHTTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCceEEEecCCcEEEEEEeCHHHHHHcCCCHHHHHHHHHh
Confidence 35799999999999999988644455554 13567788899983
No 72
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=30.91 E-value=32 Score=21.02 Aligned_cols=23 Identities=22% Similarity=0.345 Sum_probs=19.0
Q ss_pred cCCCc--eEEEEEcCCCEEEEEeeC
Q 034383 22 NMKEI--EAHLIEKQQCRVSVCGRF 44 (96)
Q Consensus 22 ~l~GV--~~v~vD~~~~~VtV~g~~ 44 (96)
.|+|+ +++++.+..+.++|.|..
T Consensus 19 dlPG~~~edi~V~v~~~~L~I~g~~ 43 (106)
T 3l1e_A 19 DVKHFSPEDLTVKVQEDFVEIHGKH 43 (106)
T ss_dssp ECTTSCGGGEEEEEETTEEEEEEEE
T ss_pred ECCCCChHHEEEEEECCEEEEEEEE
Confidence 57887 478999999999999863
No 73
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=30.61 E-value=26 Score=20.85 Aligned_cols=24 Identities=13% Similarity=0.216 Sum_probs=19.3
Q ss_pred cCCCc--eEEEEEcCCCEEEEEeeCC
Q 034383 22 NMKEI--EAHLIEKQQCRVSVCGRFR 45 (96)
Q Consensus 22 ~l~GV--~~v~vD~~~~~VtV~g~~d 45 (96)
.|+|+ +++++....+.++|.|...
T Consensus 21 ~lPG~~~edi~v~~~~~~L~I~g~~~ 46 (100)
T 3gla_A 21 DLPGIDPSQIEVQMDKGILSIRGERK 46 (100)
T ss_dssp ECTTSCGGGCEEEEETTEEEEEEEEC
T ss_pred ECCCCCHHHEEEEEECCEEEEEEEEc
Confidence 57887 4688888899999999753
No 74
>1tua_A Hypothetical protein APE0754; structural genomics, protein structure initiative, MCSG, four layers alpha-beta sandwich, PSI; 1.50A {Aeropyrum pernix} SCOP: d.51.1.1 d.51.1.1
Probab=30.11 E-value=1e+02 Score=21.19 Aligned_cols=38 Identities=8% Similarity=0.142 Sum_probs=27.0
Q ss_pred HHHHHHHhcCCCceEEEEEcCCCEEEEEee---CCHHHHHHH
Q 034383 14 RKLRRILLNMKEIEAHLIEKQQCRVSVCGR---FRPSDVAIK 52 (96)
Q Consensus 14 ~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~---~dp~~l~~~ 52 (96)
..+.+.|....|+ ++++|..++.|+|.++ -||..+.++
T Consensus 23 g~~~k~i~e~~g~-~i~id~~~~~V~i~t~~~t~dp~~i~KA 63 (191)
T 1tua_A 23 GEVKAEIMRRTGT-VITVDTENSMVIVEPEAEGIPPVNLMKA 63 (191)
T ss_dssp GHHHHHHHHHHTE-EEEEETTTTEEEEEESSTTSCHHHHHHH
T ss_pred HhHHHHHHHHHCc-EEEEEcCCCeEEEEeCCCCCCHHHHHHH
Confidence 4566667665575 6899999999999843 676655443
No 75
>3mso_A Steroid delta-isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.57A {Pseudomonas aeruginosa}
Probab=30.00 E-value=24 Score=22.41 Aligned_cols=37 Identities=16% Similarity=0.153 Sum_probs=30.3
Q ss_pred cCCCceEEEEEcCCCEEEEEeeCCHHHHHHHHHHhcC
Q 034383 22 NMKEIEAHLIEKQQCRVSVCGRFRPSDVAIKIRKKMN 58 (96)
Q Consensus 22 ~l~GV~~v~vD~~~~~VtV~g~~dp~~l~~~l~kk~G 58 (96)
.+.||.-+++|.+...+.+..-++|...+.+|..+.|
T Consensus 95 ~v~Gv~v~~~~~dGkI~~~~~~~~P~~~~~~~~~~~~ 131 (143)
T 3mso_A 95 ELKGIDMIRFDDDGRIVDFEVMVRPMSGLQALGEEMG 131 (143)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEESHHHHHHHHHHHH
T ss_pred EEEEEEEEEECCCCcEEEEEEEECcHHHHHHHHHHHH
Confidence 5678888888877778888999999999888886555
No 76
>2fi0_A Conserved domain protein; structural genomics,streptococcus pneumoniae, PSI, protein S initiative; 2.10A {Streptococcus pneumoniae} SCOP: a.248.1.1
Probab=29.19 E-value=44 Score=19.54 Aligned_cols=19 Identities=5% Similarity=-0.073 Sum_probs=16.3
Q ss_pred eCCHHHHHHHHHHhcCCcEE
Q 034383 43 RFRPSDVAIKIRKKMNRRVE 62 (96)
Q Consensus 43 ~~dp~~l~~~l~kk~Gk~a~ 62 (96)
.+|++.|+++|. +.||.+.
T Consensus 60 gid~d~l~~~L~-~~g~~~~ 78 (81)
T 2fi0_A 60 GTPMDKIVRTLE-ANGYEVI 78 (81)
T ss_dssp TCCHHHHHHHHH-HTTCEEE
T ss_pred CCCHHHHHHHHH-HcCCEee
Confidence 379999999999 9999764
No 77
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=28.59 E-value=78 Score=20.16 Aligned_cols=31 Identities=10% Similarity=0.014 Sum_probs=24.1
Q ss_pred EEEeccchhhH-----HHHHHHHhcCCCceEEEEEcC
Q 034383 3 MRINLDCNGCC-----RKLRRILLNMKEIEAHLIEKQ 34 (96)
Q Consensus 3 lkV~M~C~~C~-----~kI~k~L~~l~GV~~v~vD~~ 34 (96)
+-.-..|+.|. .++++.|... ||.--++|..
T Consensus 4 vYtt~~c~~c~~kk~c~~aK~lL~~k-gV~feEidI~ 39 (121)
T 1u6t_A 4 VYIASSSGSTAIKKKQQDVLGFLEAN-KIGFEEKDIA 39 (121)
T ss_dssp EEECTTCSCHHHHHHHHHHHHHHHHT-TCCEEEEECT
T ss_pred EEecCCCCCccchHHHHHHHHHHHHC-CCceEEEECC
Confidence 44467799997 8999988774 8987777776
No 78
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=28.39 E-value=30 Score=20.87 Aligned_cols=24 Identities=8% Similarity=0.214 Sum_probs=19.6
Q ss_pred cCCCc--eEEEEEcCCCEEEEEeeCC
Q 034383 22 NMKEI--EAHLIEKQQCRVSVCGRFR 45 (96)
Q Consensus 22 ~l~GV--~~v~vD~~~~~VtV~g~~d 45 (96)
.|+|+ +++++....+.++|.|...
T Consensus 23 ~lPG~~~edi~v~~~~~~L~I~g~~~ 48 (102)
T 4fei_A 23 DVPGVDAGTLALAEDGGQLTVSGERP 48 (102)
T ss_dssp ECTTCCGGGCEEEEETTEEEEEEEEC
T ss_pred ECCCCchHhEEEEEECCEEEEEEEEe
Confidence 57887 4788888999999999753
No 79
>2g2k_A EIF-5, eukaryotic translation initiation factor 5; EIF125 fold; NMR {Homo sapiens}
Probab=28.38 E-value=57 Score=22.36 Aligned_cols=26 Identities=12% Similarity=0.128 Sum_probs=22.7
Q ss_pred EEEEcCCCEEEEEeeCCHHHHHHHHH
Q 034383 29 HLIEKQQCRVSVCGRFRPSDVAIKIR 54 (96)
Q Consensus 29 v~vD~~~~~VtV~g~~dp~~l~~~l~ 54 (96)
-.+|..+++++|.|.+++..|...|+
T Consensus 65 g~id~~~~rliinG~~~~~~i~~~L~ 90 (170)
T 2g2k_A 65 TQFDVKNDRYIVNGSHEANKLQDMLD 90 (170)
T ss_dssp CEECTTTCCEEEEBCCCHHHHHHHHH
T ss_pred eeecCCCCEEEEEeeeCHHHHHHHHH
Confidence 36777799999999999999988887
No 80
>3flj_A Uncharacterized protein conserved in bacteria WIT cystatin-like fold; YP_168589.1; HET: MSE; 2.00A {Silicibacter pomeroyi dss-3}
Probab=28.08 E-value=26 Score=23.35 Aligned_cols=37 Identities=14% Similarity=0.122 Sum_probs=30.5
Q ss_pred cCCCceEEEEEcCCCEEEEEeeCCHHHHHHHHHHhcC
Q 034383 22 NMKEIEAHLIEKQQCRVSVCGRFRPSDVAIKIRKKMN 58 (96)
Q Consensus 22 ~l~GV~~v~vD~~~~~VtV~g~~dp~~l~~~l~kk~G 58 (96)
.+.||.-+++|.+...+.+..-++|...+.+|..+.|
T Consensus 102 ~v~gvd~~~fdedGkI~e~~vm~rP~k~l~al~~~m~ 138 (155)
T 3flj_A 102 DAVGVDLITLNEGGLIQDFEVVMRPYKTVGALRDAMN 138 (155)
T ss_dssp EEEEEEEEEECTTSSEEEEEEEEECHHHHHHHHHHHH
T ss_pred EEEEEEEEEEcCCCCEEEEEEEEChHHHHHHHHHHHH
Confidence 4567888888888888899999999999888886554
No 81
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1
Probab=27.84 E-value=63 Score=23.45 Aligned_cols=45 Identities=18% Similarity=0.252 Sum_probs=27.1
Q ss_pred hHHHHHHHHhcCCCceEEEEEcCCCEEEEEeeCCHHHHHHHHHHhcC
Q 034383 12 CCRKLRRILLNMKEIEAHLIEKQQCRVSVCGRFRPSDVAIKIRKKMN 58 (96)
Q Consensus 12 C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~~dp~~l~~~l~kk~G 58 (96)
..+.|+++|.. +++..-++....+++.|.+. +++.+.++|.+-.|
T Consensus 26 L~~nI~~~L~~-~~~~~~~v~~~~gri~V~~~-~~~~~~~~L~~vfG 70 (307)
T 1vbk_A 26 LMNNIREALVT-EEVPYKEIFSRHGRIIVKTN-SPKEAANVLVRVFG 70 (307)
T ss_dssp HHHHHHHHHHH-TTCCCSEEEEETTEEEEECS-CHHHHHHHHTTSTT
T ss_pred HHHHHHHHhcc-cCccceeEEEECCEEEEEcC-CHHHHHHHHhhcCC
Confidence 45667777766 44431124455677777753 67777777773334
No 82
>3gzb_A Putative snoal-like polyketide cyclase; YP_001182657.1, STRU genomics, joint center for structural genomics, JCSG; HET: MSE; 1.44A {Shewanella putrefaciens} PDB: 3lza_A*
Probab=27.46 E-value=70 Score=21.52 Aligned_cols=32 Identities=6% Similarity=0.070 Sum_probs=26.1
Q ss_pred cCCCceEEEEEcCCCEEEEEee-CCHHHHHHHH
Q 034383 22 NMKEIEAHLIEKQQCRVSVCGR-FRPSDVAIKI 53 (96)
Q Consensus 22 ~l~GV~~v~vD~~~~~VtV~g~-~dp~~l~~~l 53 (96)
.++||..+..|+.+.+|+=.-+ +|-..+...|
T Consensus 119 aiPGVTtlklDm~~~Rv~eh~DlmDyqTm~DQl 151 (154)
T 3gzb_A 119 AIPAVTSLKLDMLNRRVTEHVDLIDYQTMSDQL 151 (154)
T ss_dssp EEEEEEEEEEETTTTEEEEEEEEECHHHHHHHH
T ss_pred ecCceEEEeecCCccchhhhHhHHhHHHHHHHh
Confidence 5799999999999999998765 6777766554
No 83
>1f60_B Elongation factor EEF1BA; protein-protein complex, translation; 1.67A {Saccharomyces cerevisiae} SCOP: d.58.12.1 PDB: 1g7c_B* 2b7c_B 2b7b_B 1ije_B* 1ijf_B*
Probab=27.30 E-value=50 Score=20.37 Aligned_cols=23 Identities=9% Similarity=0.114 Sum_probs=19.1
Q ss_pred hhHHHHHHHHhcCCC-ceEEEEEc
Q 034383 11 GCCRKLRRILLNMKE-IEAHLIEK 33 (96)
Q Consensus 11 ~C~~kI~k~L~~l~G-V~~v~vD~ 33 (96)
+=...+...++.++| |+|+++..
T Consensus 67 ~~tD~lee~i~~~ed~VqSvdI~~ 90 (94)
T 1f60_B 67 VSLDDLQQSIEEDEDHVQSTDIAA 90 (94)
T ss_dssp CCHHHHHHHHHTCTTTEEEEEEEE
T ss_pred cChHHHHHHHHhccCceeEEEEEE
Confidence 446789999999999 99998753
No 84
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=27.07 E-value=39 Score=22.07 Aligned_cols=24 Identities=4% Similarity=0.070 Sum_probs=19.4
Q ss_pred cCCCc--eEEEEEcCCCEEEEEeeCC
Q 034383 22 NMKEI--EAHLIEKQQCRVSVCGRFR 45 (96)
Q Consensus 22 ~l~GV--~~v~vD~~~~~VtV~g~~d 45 (96)
.|+|+ ++++|+...+.++|.|...
T Consensus 73 dlPG~~~edi~V~~~~~~L~I~g~~~ 98 (161)
T 4eld_A 73 WLPGVNKEDIILNAVGDTLEIRAKRS 98 (161)
T ss_dssp ECTTCCGGGEEEEEETTEEEEEEECC
T ss_pred ECCCCChHhEEEEEECCEEEEEEEEc
Confidence 47887 4788999999999998643
No 85
>1wh9_A 40S ribosomal protein S3; KH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, ribosome; NMR {Homo sapiens} SCOP: d.52.3.1
Probab=27.01 E-value=1.1e+02 Score=18.50 Aligned_cols=40 Identities=15% Similarity=0.271 Sum_probs=28.1
Q ss_pred CCceEEEEEcCCCEEEEE----------ee--CCHHHHHHHHHHhcC---CcEEE
Q 034383 24 KEIEAHLIEKQQCRVSVC----------GR--FRPSDVAIKIRKKMN---RRVEI 63 (96)
Q Consensus 24 ~GV~~v~vD~~~~~VtV~----------g~--~dp~~l~~~l~kk~G---k~a~i 63 (96)
.||..+++.....++.|. |. .+-+.|...|++.+| +++.+
T Consensus 23 aGis~IeIeR~~~~i~I~I~tarPg~vIGkkG~~Ie~L~~~l~k~~~~~~~~v~I 77 (92)
T 1wh9_A 23 DGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVEL 77 (92)
T ss_dssp TTEEEEEEEECSSCEEEEEEESCHHHHHCGGGHHHHHHHHHHHHHHCCCTTSEEE
T ss_pred CceeeEEEEECCCeEEEEEEeCCCceEEcCCcHHHHHHHHHHHHHhCCCCCeEEE
Confidence 599999999988887775 21 234667777787775 45555
No 86
>1b64_A Elongation factor 1-beta; guanine nucleotide exchange factor, G-protein, translation elongation; NMR {Homo sapiens} SCOP: d.58.12.1
Probab=26.96 E-value=50 Score=20.23 Aligned_cols=23 Identities=4% Similarity=0.081 Sum_probs=19.2
Q ss_pred hhHHHHHHHHhcCCC-ceEEEEEc
Q 034383 11 GCCRKLRRILLNMKE-IEAHLIEK 33 (96)
Q Consensus 11 ~C~~kI~k~L~~l~G-V~~v~vD~ 33 (96)
+=...+...++.++| |+|+++..
T Consensus 64 v~tD~lee~i~~~ed~VqSvdI~~ 87 (91)
T 1b64_A 64 VGTDMLEEQITAFEDYVQSMDVAA 87 (91)
T ss_dssp SCHHHHHHHHTTCTTTEEEEEESC
T ss_pred cChHHHHHHHHhccCceeEEEEEE
Confidence 446789999999999 99998754
No 87
>2d74_B Translation initiation factor 2 beta subunit; protein complex; 2.80A {Pyrococcus furiosus} PDB: 2dcu_B*
Probab=26.94 E-value=60 Score=21.67 Aligned_cols=24 Identities=38% Similarity=0.531 Sum_probs=21.1
Q ss_pred EEEEcCCCEEEEEeeCCHHHHHHHHH
Q 034383 29 HLIEKQQCRVSVCGRFRPSDVAIKIR 54 (96)
Q Consensus 29 v~vD~~~~~VtV~g~~dp~~l~~~l~ 54 (96)
-.+| +++.+|.|.+++..|.+.|+
T Consensus 75 g~id--~~rlii~G~~~~~~i~~~L~ 98 (148)
T 2d74_B 75 GTLE--GRRVVLQGRFTPYLIANKLK 98 (148)
T ss_dssp EEEE--TTEEEESSCCCHHHHHHHHH
T ss_pred eeec--CCEEEEEeeeCHHHHHHHHH
Confidence 3556 89999999999999999988
No 88
>1nkw_F 50S ribosomal protein L9; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1nwx_F* 1nwy_F* 1sm1_F* 1xbp_F* 1pnu_F 1pny_F 1vor_I 1vou_I 1vow_I 1voy_I 1vp0_I
Probab=25.97 E-value=1.1e+02 Score=20.13 Aligned_cols=39 Identities=15% Similarity=0.148 Sum_probs=25.4
Q ss_pred hcCCCceEEEEEcCCCEEEEEeeCCHHHHHHHHHHhcCCcE
Q 034383 21 LNMKEIEAHLIEKQQCRVSVCGRFRPSDVAIKIRKKMNRRV 61 (96)
Q Consensus 21 ~~l~GV~~v~vD~~~~~VtV~g~~dp~~l~~~l~kk~Gk~a 61 (96)
..|+|. .+.+....+.-.+-|++++..|.++|.+. |..+
T Consensus 69 ~~L~~~-~v~i~~k~g~gklfGSVt~~dIa~al~~~-g~~i 107 (146)
T 1nkw_F 69 SRLNGV-AVELSVRAGEGKIYGAVTHQDVANSLDQL-GFDV 107 (146)
T ss_pred HHhcCC-EEEEEEEcCCCceeeccCHHHHHHHHHHc-CCee
Confidence 345564 35554433322357899999999999944 8755
No 89
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=25.75 E-value=1.1e+02 Score=18.06 Aligned_cols=41 Identities=15% Similarity=0.168 Sum_probs=25.9
Q ss_pred ccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEeeCCHHHHHHHHHHhcCC
Q 034383 7 LDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGRFRPSDVAIKIRKKMNR 59 (96)
Q Consensus 7 M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~~dp~~l~~~l~kk~Gk 59 (96)
-.|..|.+ +++.|..+ ||.-..+|... ++ .+.+.|.+.+|.
T Consensus 28 ~~Cp~C~~-ak~~L~~~-~i~~~~vdi~~---------~~-~~~~~l~~~~g~ 68 (109)
T 1wik_A 28 AKCGFSKQ-ILEILNST-GVEYETFDILE---------DE-EVRQGLKTFSNW 68 (109)
T ss_dssp CCSSTHHH-HHHHHHHT-CSCEEEEESSS---------CH-HHHHHHHHHHSC
T ss_pred CCCchHHH-HHHHHHHc-CCCeEEEECCC---------CH-HHHHHHHHHhCC
Confidence 57999985 56677765 77766666654 23 455555545564
No 90
>2e3u_A PH-DIM2P, hypothetical protein PH1566; PRE-ribosomal RNA processing factor, RNA binding protein; 2.30A {Pyrococcus horikoshii} PDB: 3aev_B
Probab=25.75 E-value=1e+02 Score=21.48 Aligned_cols=38 Identities=11% Similarity=0.042 Sum_probs=25.5
Q ss_pred HHHHHHhcCCCceEEEEEcCCCEEEEEee---CCHHHHHHHH
Q 034383 15 KLRRILLNMKEIEAHLIEKQQCRVSVCGR---FRPSDVAIKI 53 (96)
Q Consensus 15 kI~k~L~~l~GV~~v~vD~~~~~VtV~g~---~dp~~l~~~l 53 (96)
++-+.|..--|+ ++++|.+++.|+|.|. -|++.+.+|.
T Consensus 54 k~Ik~I~e~tgv-kI~I~~~~g~V~I~~~~~t~d~~~i~kA~ 94 (219)
T 2e3u_A 54 QTKKEIEKRTKT-KITIDSETGEVWITSTKETEDPLAVWKAR 94 (219)
T ss_dssp HHHHHHHHHHTE-EEEECTTTCEEEEEECTTCCSHHHHHHHH
T ss_pred HHHHHHHHHHCc-EEEEEcCCCEEEEecCCCCCCHHHHHHHH
Confidence 444555554564 6888888999999874 3566665543
No 91
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=25.61 E-value=61 Score=26.02 Aligned_cols=30 Identities=3% Similarity=0.122 Sum_probs=26.9
Q ss_pred EEEEcCCCEEEEEeeCCHHHHHHHHHHhcCC
Q 034383 29 HLIEKQQCRVSVCGRFRPSDVAIKIRKKMNR 59 (96)
Q Consensus 29 v~vD~~~~~VtV~g~~dp~~l~~~l~kk~Gk 59 (96)
+++|.++..++|...+....|.++|+ +.|+
T Consensus 267 leiD~~~~~atVeaGv~~~~L~~~L~-~~Gl 296 (658)
T 4bby_A 267 LWVDENNLTAHVEAGITGQELERQLK-ESGY 296 (658)
T ss_dssp EEEETTTTEEEEETTCBHHHHHHHHH-HHTE
T ss_pred EEEcCCCCEEEEecCchHHHHHHHHH-HcCC
Confidence 37899999999999999999999999 7785
No 92
>3hlu_A Uncharacterized protein DUF2179; alpha-beta half sandwich, structural genomics, PSI-2, protei structure initiative; 2.65A {Eubacterium ventriosum}
Probab=25.39 E-value=97 Score=18.65 Aligned_cols=30 Identities=13% Similarity=0.196 Sum_probs=23.3
Q ss_pred EEEEEeeCCHHHHHHHHHHhcCCcEEEeecc
Q 034383 37 RVSVCGRFRPSDVAIKIRKKMNRRVEILEIQ 67 (96)
Q Consensus 37 ~VtV~g~~dp~~l~~~l~kk~Gk~a~i~~~~ 67 (96)
.|.|.+ -.++.|.++|.++.|+-+.+|.-.
T Consensus 10 ~v~IIS-~~~eeI~~~I~~~l~rGvT~~~g~ 39 (96)
T 3hlu_A 10 MVYIVS-AKRKIIADRMLQELDLGVTMLQAV 39 (96)
T ss_dssp EEEEEC-TTHHHHHHHHHHHSCCCCEEEECE
T ss_pred EEEEEe-CCHHHHHHHHHHhcCCCEEEEEEE
Confidence 355553 378999999998899999999654
No 93
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=24.88 E-value=1.1e+02 Score=18.25 Aligned_cols=29 Identities=7% Similarity=-0.004 Sum_probs=17.6
Q ss_pred ccchhhHHHH------HHHHhcCCCceEEEEEcCC
Q 034383 7 LDCNGCCRKL------RRILLNMKEIEAHLIEKQQ 35 (96)
Q Consensus 7 M~C~~C~~kI------~k~L~~l~GV~~v~vD~~~ 35 (96)
-.|..|..-. .+....++++.-+.+|...
T Consensus 41 ~wC~~C~~~~~~~~~~~~l~~~~~~~~~~~vd~~~ 75 (134)
T 2fwh_A 41 DWCVACKEFEKYTFSDPQVQKALADTVLLQANVTA 75 (134)
T ss_dssp TTCHHHHHHHHHTTTSHHHHHHTTTSEEEEEECTT
T ss_pred CCCHHHHHHHHHhcCCHHHHHHhcCcEEEEEeCCC
Confidence 4599997643 2333445677766776643
No 94
>3v4k_A DNA DC->DU-editing enzyme apobec-3G; antiviral defense, HOST-virus interaction, hydrola metal-binding, nucleus; HET: DNA; 1.38A {Homo sapiens} PDB: 3v4j_A* 3ir2_A* 2kem_A* 2jyw_A* 2kbo_A* 3e1u_A* 3iqs_A*
Probab=24.51 E-value=92 Score=21.89 Aligned_cols=56 Identities=14% Similarity=0.297 Sum_probs=36.1
Q ss_pred cchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEeeCCHHHHHHHHHHhcCCcEEEeeccC
Q 034383 8 DCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGRFRPSDVAIKIRKKMNRRVEILEIQE 68 (96)
Q Consensus 8 ~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~~dp~~l~~~l~kk~Gk~a~i~~~~~ 68 (96)
.|..|+.+|..-|..-++|. ..| -..++--. .-+-..=+..|. .+|-.+.|.+..+
T Consensus 110 PC~~CA~~v~~FL~~~~~v~-L~I--f~aRLY~~-~~~~~~gLr~L~-~aG~~v~iM~~~e 165 (203)
T 3v4k_A 110 PCFSCAQEMAKFISKNKHVS-LCI--KTARIYDD-QGRCQEGLRTLA-EAGAKISIMTYSE 165 (203)
T ss_pred ChHHHHHHHHHHHhhCCCeE-EEE--EEEeeccc-CchHHHHHHHHH-HCCCeEEecCHHH
Confidence 39999999999999988773 111 11122211 123344566667 7898999888654
No 95
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=24.38 E-value=1.3e+02 Score=18.51 Aligned_cols=40 Identities=13% Similarity=0.098 Sum_probs=24.9
Q ss_pred cchhhHHHHHHHHhcCCCce-EEEEEcCCCEEEEEeeCCHHHHHHHHHHhcCC
Q 034383 8 DCNGCCRKLRRILLNMKEIE-AHLIEKQQCRVSVCGRFRPSDVAIKIRKKMNR 59 (96)
Q Consensus 8 ~C~~C~~kI~k~L~~l~GV~-~v~vD~~~~~VtV~g~~dp~~l~~~l~kk~Gk 59 (96)
.|..|. ++++.|..+ ||. -..+|... + ..+.+.|++.+|.
T Consensus 34 ~Cp~C~-~ak~lL~~~-gv~~~~~vdV~~---------d-~~~~~~l~~~tg~ 74 (118)
T 2wem_A 34 QCGFSN-AVVQILRLH-GVRDYAAYNVLD---------D-PELRQGIKDYSNW 74 (118)
T ss_dssp SSHHHH-HHHHHHHHT-TCCCCEEEESSS---------C-HHHHHHHHHHHTC
T ss_pred ccHHHH-HHHHHHHHc-CCCCCEEEEcCC---------C-HHHHHHHHHHhCC
Confidence 699987 567778776 773 45555542 3 3455666645564
No 96
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=24.15 E-value=1.3e+02 Score=18.26 Aligned_cols=51 Identities=20% Similarity=0.152 Sum_probs=35.5
Q ss_pred eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEee--CCHHHHHHHHHHhcCCcEEEeec
Q 034383 6 NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGR--FRPSDVAIKIRKKMNRRVEILEI 66 (96)
Q Consensus 6 ~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~--~dp~~l~~~l~kk~Gk~a~i~~~ 66 (96)
++.|..=.-+++++|.+++. .+.+.|..+ .....|.+.++ ..|+.+.....
T Consensus 33 Gl~CP~Pvl~tkkaL~~l~~---------Ge~L~Vl~dd~~a~~dI~~~~~-~~G~~v~~~e~ 85 (98)
T 1jdq_A 33 GEVCPVPDVETKRALQNMKP---------GEILEVWIDYPMSKERIPETVK-KLGHEVLEIEE 85 (98)
T ss_dssp SCCSSHHHHHHHHHHHTCCT---------TCEEEEEESSCTHHHHHHHHHH-HSSCCEEEEEE
T ss_pred CCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHH-HCCCEEEEEEE
Confidence 67899999999999998753 223444433 33467887777 99998766543
No 97
>3aqo_A Probable secdf protein-export membrane protein; periplasmic domain, translocon, cell membrane, M protein transport, translocation; 2.60A {Thermus thermophilus}
Probab=24.00 E-value=1.8e+02 Score=20.24 Aligned_cols=51 Identities=18% Similarity=0.157 Sum_probs=34.2
Q ss_pred HHHHHHHhcCCCceEEEEEc-CCCEEEEE--eeCCHHH--HHHHHHHhcCCcEEEeecc
Q 034383 14 RKLRRILLNMKEIEAHLIEK-QQCRVSVC--GRFRPSD--VAIKIRKKMNRRVEILEIQ 67 (96)
Q Consensus 14 ~kI~k~L~~l~GV~~v~vD~-~~~~VtV~--g~~dp~~--l~~~l~kk~Gk~a~i~~~~ 67 (96)
..|++.+..+ ||....|-. .++++.|+ |.-|++. +.+.|. +++ .-+++...
T Consensus 30 ~ilr~Rvn~~-GvsEp~I~~~G~~rI~VelPGv~d~~~~~a~~llg-~ta-~LeFr~v~ 85 (229)
T 3aqo_A 30 TVLENRINAL-GVAEPLIQIQGQKRIVVELPGLSQADQDRALKLIG-QRA-VLEFRIVK 85 (229)
T ss_dssp HHHHHHHHHH-TCSSCEEEEETTTEEEEEECSCCHHHHHHHHHHHH-CCC-CEEEEEBC
T ss_pred HHHHHHHhhc-CCCccEEEEeCCCeEEEECCCCCCHHHHHHHHHhC-Cce-EEEEEEcc
Confidence 3456666665 777554443 55788886 6678988 888888 666 46666553
No 98
>1veh_A NIFU-like protein hirip5; structural genomics, mouse cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: d.52.8.1
Probab=23.69 E-value=66 Score=19.65 Aligned_cols=30 Identities=23% Similarity=0.573 Sum_probs=19.2
Q ss_pred EEEEecc--chhhHH-------HHHHHHh-cCCCceEEEE
Q 034383 2 VMRINLD--CNGCCR-------KLRRILL-NMKEIEAHLI 31 (96)
Q Consensus 2 vlkV~M~--C~~C~~-------kI~k~L~-~l~GV~~v~v 31 (96)
+++|.|. |.+|.. -|++.|. .++.|..|..
T Consensus 46 ~V~v~l~GaC~gC~ss~~Tlk~gIE~~L~~~vpev~~V~~ 85 (92)
T 1veh_A 46 IVRLKLQGSCTSCPSSIITLKSGIQNMLQFYIPEVEGVEQ 85 (92)
T ss_dssp EEEECCCCCCCCCHHHHHHTHHHHHHHHHHHCSSCCCEEE
T ss_pred EEEEEEeecCCCCCCcHHHHHHHHHHHHHHHCCCCCEEEE
Confidence 3556666 999975 4555665 4777777653
No 99
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=22.76 E-value=1.3e+02 Score=17.89 Aligned_cols=45 Identities=13% Similarity=0.251 Sum_probs=28.0
Q ss_pred eccchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEeeCCHHHHHHHHHHhcCC
Q 034383 6 NLDCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGRFRPSDVAIKIRKKMNR 59 (96)
Q Consensus 6 ~M~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~~dp~~l~~~l~kk~Gk 59 (96)
.-.|+.|. ++++.|..+ ||.--.+|.+. .-+...+.+.|.+.+|.
T Consensus 24 ~~~Cp~C~-~ak~~L~~~-~i~~~~~dvd~-------~~~~~~~~~~l~~~~g~ 68 (114)
T 3h8q_A 24 KSYCPHST-RVKELFSSL-GVECNVLELDQ-------VDDGARVQEVLSEITNQ 68 (114)
T ss_dssp CTTCHHHH-HHHHHHHHT-TCCCEEEETTT-------STTHHHHHHHHHHHHSC
T ss_pred cCCCCcHH-HHHHHHHHc-CCCcEEEEecC-------CCChHHHHHHHHHHhCC
Confidence 45699996 567778776 66544444432 12556777777556664
No 100
>2w7v_A General secretion pathway protein L; transport, type II secretion, transport protein; 2.30A {Vibrio parahaemolyticus}
Probab=22.57 E-value=1.4e+02 Score=18.27 Aligned_cols=49 Identities=20% Similarity=0.295 Sum_probs=35.6
Q ss_pred HHHHHhcCCCc--eEEEEEcCCCEEEEEee---CC-HHHHHHHHHHhcCCcEEEeec
Q 034383 16 LRRILLNMKEI--EAHLIEKQQCRVSVCGR---FR-PSDVAIKIRKKMNRRVEILEI 66 (96)
Q Consensus 16 I~k~L~~l~GV--~~v~vD~~~~~VtV~g~---~d-p~~l~~~l~kk~Gk~a~i~~~ 66 (96)
+-.+|...+|| .++..|...+.+.+.-. +. -+.+.+.|. + |+.|++-+.
T Consensus 17 L~~~l~~vp~l~~~sLryD~~R~ELrlq~~A~dF~~~E~lr~~l~-~-gf~Ve~Gs~ 71 (95)
T 2w7v_A 17 LPATLGQVKDLEITSFKYDGQRGEVRIHARSSDFQPFEQARVKLA-E-KFNVEQGQL 71 (95)
T ss_dssp HHHHHHTSTTCEEEEEEEETTTTEEEEEEEESSSHHHHHHHHHHH-T-TEEEEECCC
T ss_pred HHHHhccCCCceEEEEeecCCCCeEEEEEecCCHHHHHHHHHHhh-c-CcEEehhhh
Confidence 44567788886 58889999999888632 32 567777876 5 998887654
No 101
>1qd1_A Formiminotransferase-cyclodeaminase; functional dimer, alpha-beta-BETA-alpha sandwich, electrosta charged substrate tunnel; HET: FON; 1.70A {Sus scrofa} SCOP: d.58.34.1 d.58.34.1
Probab=22.23 E-value=1.2e+02 Score=22.90 Aligned_cols=45 Identities=13% Similarity=-0.048 Sum_probs=31.0
Q ss_pred HHHHHHHHhcCCCce--EEEEEcCCCEEEEEeeCCHHHHHHHHHHhc
Q 034383 13 CRKLRRILLNMKEIE--AHLIEKQQCRVSVCGRFRPSDVAIKIRKKM 57 (96)
Q Consensus 13 ~~kI~k~L~~l~GV~--~v~vD~~~~~VtV~g~~dp~~l~~~l~kk~ 57 (96)
..+|.+++...+||. ++..|.+-++..++=--+|+.|.++.-.-+
T Consensus 19 Ie~I~~a~~~~~gv~LLd~~~D~~~NRsv~T~vg~pe~v~eaa~~~~ 65 (325)
T 1qd1_A 19 IDAISRAVAQTPGCVLLDVDSGPSTNRTVYTFVGRPEDVVEGALNAA 65 (325)
T ss_dssp HHHHHHHHHTSTTCEEEEEEEETTTTEEEEEEEECHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcEEEeCCCCCCCCCceEEEccChHHHHHHHHHHH
Confidence 467888999999964 677788888865552234777766655333
No 102
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=22.17 E-value=1.1e+02 Score=17.01 Aligned_cols=46 Identities=20% Similarity=0.348 Sum_probs=26.7
Q ss_pred cchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEEeeCCHHHHHHHHHHhcCCc
Q 034383 8 DCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVCGRFRPSDVAIKIRKKMNRR 60 (96)
Q Consensus 8 ~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~g~~dp~~l~~~l~kk~Gk~ 60 (96)
.|..|.+ +++.|... ||.--.+|..... |..+++ +.+.|.+.+|..
T Consensus 13 ~Cp~C~~-ak~~L~~~-gi~y~~idI~~~~----~~~~~~-~~~~l~~~~g~~ 58 (87)
T 1aba_A 13 KCGPCDN-AKRLLTVK-KQPFEFINIMPEK----GVFDDE-KIAELLTKLGRD 58 (87)
T ss_dssp CCHHHHH-HHHHHHHT-TCCEEEEESCSBT----TBCCHH-HHHHHHHHHTCS
T ss_pred cCccHHH-HHHHHHHc-CCCEEEEEeeccc----cccCHH-HHHHHHHHhCCC
Confidence 7999965 66677764 7765556554211 223544 344455466765
No 103
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=22.03 E-value=1.1e+02 Score=23.52 Aligned_cols=38 Identities=11% Similarity=0.109 Sum_probs=30.9
Q ss_pred CCCceEEEEEcCCCEEEEEeeCCHHHHHHHHHHhcCCcE
Q 034383 23 MKEIEAHLIEKQQCRVSVCGRFRPSDVAIKIRKKMNRRV 61 (96)
Q Consensus 23 l~GV~~v~vD~~~~~VtV~g~~dp~~l~~~l~kk~Gk~a 61 (96)
|.....|++|.+.+.++|.+.+....|.++|. +.|+..
T Consensus 106 l~~~~~v~~d~~~~~~~v~~G~~~~~~~~~l~-~~g~~~ 143 (500)
T 3tsh_A 106 LNKMRAVWVDGKARTAWVDSGAQLGELYYAIY-KASPTL 143 (500)
T ss_dssp CTTCCCEEEETTTTEEEEETTSBHHHHHHHHH-HHCTTE
T ss_pred CcCCCCEEECCCCCEEEEccCcCHHHHHHHHH-HhCCCc
Confidence 33445678999999999999999999999998 777543
No 104
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=21.94 E-value=44 Score=20.75 Aligned_cols=25 Identities=4% Similarity=-0.064 Sum_probs=19.7
Q ss_pred cCCCc--eEEEEEcCC-CEEEEEeeCCH
Q 034383 22 NMKEI--EAHLIEKQQ-CRVSVCGRFRP 46 (96)
Q Consensus 22 ~l~GV--~~v~vD~~~-~~VtV~g~~dp 46 (96)
.|+|+ +++++.... +.++|.|....
T Consensus 41 ~lPG~~~edi~V~v~~~~~L~I~g~~~~ 68 (123)
T 3aab_A 41 DLAGFNKEKIKARVSGQNELIIEAEREI 68 (123)
T ss_dssp ECCSCCGGGCEEEEETTTEEEEEEECCC
T ss_pred ECCCCCHHHEEEEEeCCCEEEEEEEEec
Confidence 57887 468888888 99999997543
No 105
>2ctf_A Vigilin; K homology type I domain, RNA-binding, cell sterol metabolism, beta-alpha-alpha-beta-BETA-alpha structure, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=21.85 E-value=1.4e+02 Score=18.06 Aligned_cols=28 Identities=14% Similarity=0.267 Sum_probs=19.0
Q ss_pred HHHHHHhcCCCceEEEEEcCCCEEEEEee
Q 034383 15 KLRRILLNMKEIEAHLIEKQQCRVSVCGR 43 (96)
Q Consensus 15 kI~k~L~~l~GV~~v~vD~~~~~VtV~g~ 43 (96)
.|++...+..+| .+.+.-.++.|+++|.
T Consensus 48 ~Ik~i~~~~~~v-~I~fp~~~~~ItI~G~ 75 (102)
T 2ctf_A 48 NLAKITQQMPKV-HIEFTEGEDKITLEGP 75 (102)
T ss_dssp HHHHHHHHCSSS-EEEECSSSCEEEEEEC
T ss_pred cHHHHHHHcCCc-EEEeCCCCCEEEEECC
Confidence 455555556665 5666556889999997
No 106
>3e3x_A BIPA; MCSG,PSI2, structural genomics, protein struct initiative, midwest center for structural genomics, GTP-BIN nucleotide-binding; HET: MLZ MLY; 1.95A {Vibrio parahaemolyticus}
Probab=21.75 E-value=81 Score=23.67 Aligned_cols=54 Identities=11% Similarity=0.100 Sum_probs=40.3
Q ss_pred HHHHHHHHhcCC--Cc-eEEEEEcCCCEEEEEe--eCCHHHHHHHHHHhcCCcEEEeecc
Q 034383 13 CRKLRRILLNMK--EI-EAHLIEKQQCRVSVCG--RFRPSDVAIKIRKKMNRRVEILEIQ 67 (96)
Q Consensus 13 ~~kI~k~L~~l~--GV-~~v~vD~~~~~VtV~g--~~dp~~l~~~l~kk~Gk~a~i~~~~ 67 (96)
.+++..+|.++. .+ -.|+.|.+.+...|.| .+--+-|++.|+++ |+.+.+-.|+
T Consensus 55 ~~kL~~aL~kl~~eDpsL~v~~~~~t~~~~v~G~GELHLeIl~ErLrrE-g~ev~v~~P~ 113 (332)
T 3e3x_A 55 SRNILERLEKELVHNVALRVEQTDDPDKFRVSGRGELHLSILIENMRRE-GFELAVSRPE 113 (332)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEECSSTTEEEEEESSHHHHHHHHHHHHHH-TBCEEECCCE
T ss_pred HHHHHHHHHHHhccCCEEEEEEcCCCCeEEEEeeCHHHHHHHHHHHHhc-CceEEEeCCE
Confidence 457777777652 22 3677888888888874 67888999999988 9988877654
No 107
>3vow_A Probable DNA DC->DU-editing enzyme apobec-3C; antiviral deffense, HOST-virus interaction, metal- HIV-1 VIF, BET, single domain, sivagm, hydrolase; 2.15A {Homo sapiens} PDB: 3vm8_A
Probab=20.88 E-value=54 Score=22.89 Aligned_cols=50 Identities=16% Similarity=0.413 Sum_probs=35.0
Q ss_pred cchhhHHHHHHHHhcCCCceEEEEEcCCCEEEEE-ee----CCH--HHHHHHHHHhcCCcEEEeeccC
Q 034383 8 DCNGCCRKLRRILLNMKEIEAHLIEKQQCRVSVC-GR----FRP--SDVAIKIRKKMNRRVEILEIQE 68 (96)
Q Consensus 8 ~C~~C~~kI~k~L~~l~GV~~v~vD~~~~~VtV~-g~----~dp--~~l~~~l~kk~Gk~a~i~~~~~ 68 (96)
.|..|+.+|..-|.+-++|. ++|- +. .++ ..=+..|. ..|-.+.|.+.++
T Consensus 96 PC~~CA~~va~FL~~~~~v~----------L~If~aRLY~~~~~~~q~gLr~L~-~~G~~v~iM~~~e 152 (190)
T 3vow_A 96 PCPDCAGEVAEFLARHSNVN----------LTIFTARLYYFQYPCYQEGLRSLS-QEGVAVEIMDYED 152 (190)
T ss_dssp CCHHHHHHHHHHHHHCTTEE----------EEEEEEECTTTTSHHHHHHHHHHH-HHTCEEEECCHHH
T ss_pred chHHHHHHHHHHHHhCCCeE----------EEEEEEecccccCchHHHHHHHHH-HCCCcEEEeChHH
Confidence 39999999999999988762 2232 22 233 23455666 7899999998765
No 108
>1pqx_A Conserved hypothetical protein; ZR18,structure, autostructure,spins,autoassign, northeast structural genomics consortium; NMR {Staphylococcus aureus subsp} SCOP: d.267.1.1 PDB: 2ffm_A
Probab=20.75 E-value=44 Score=20.49 Aligned_cols=38 Identities=13% Similarity=0.038 Sum_probs=28.3
Q ss_pred HHHHHhcCCCceEEEEEcCCCEEEEE--eeCCHHHHHHHHHH
Q 034383 16 LRRILLNMKEIEAHLIEKQQCRVSVC--GRFRPSDVAIKIRK 55 (96)
Q Consensus 16 I~k~L~~l~GV~~v~vD~~~~~VtV~--g~~dp~~l~~~l~k 55 (96)
+-+.|-.++||.+|-+. .+-|||+ ..++++.|.-.|..
T Consensus 41 LA~~LF~i~gVk~Vf~g--~dFITVtK~~~~dW~~ikp~V~~ 80 (91)
T 1pqx_A 41 FINDILKVEGVKSIFHV--MDFISVDKENDANWETVLPKVEA 80 (91)
T ss_dssp HHHHHHHSTTEEEEEEE--TTEEEEEECTTSCSTTTHHHHHH
T ss_pred HHHHhhCCCCeeEEEEe--CCEEEEecCCCCCHHHHHHHHHH
Confidence 44566689999998876 5588887 35788887777763
No 109
>2hh2_A KH-type splicing regulatory protein; KH-RNA binding domain, RNA binding protein; NMR {Homo sapiens}
Probab=20.63 E-value=1.3e+02 Score=18.27 Aligned_cols=33 Identities=12% Similarity=0.073 Sum_probs=19.7
Q ss_pred HHhcCCCceEEEEEcCC--------CEEEEEeeCCHHHHHHHHH
Q 034383 19 ILLNMKEIEAHLIEKQQ--------CRVSVCGRFRPSDVAIKIR 54 (96)
Q Consensus 19 ~L~~l~GV~~v~vD~~~--------~~VtV~g~~dp~~l~~~l~ 54 (96)
.|.+..|+ ++.++-.. ..|+|.| +++.+..|+.
T Consensus 31 ~I~~~TGa-~I~I~~~~~~~~~~~~r~V~I~G--~~e~v~~A~~ 71 (107)
T 2hh2_A 31 AINQQTGA-FVEISRQLPPNGDPNFKLFIIRG--SPQQIDHAKQ 71 (107)
T ss_dssp HHHHHSSS-EEEECCCCCTTCCTTEEEEEEES--CHHHHHHHHH
T ss_pred HHHHHhCC-EEEEcCccCCCCCCCceEEEEEC--CHHHHHHHHH
Confidence 35555676 57776542 5788888 5555544433
No 110
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=20.61 E-value=74 Score=22.03 Aligned_cols=30 Identities=7% Similarity=-0.006 Sum_probs=26.6
Q ss_pred EEEEcCCCEEEEEeeCCHHHHHHHHHHhcCC
Q 034383 29 HLIEKQQCRVSVCGRFRPSDVAIKIRKKMNR 59 (96)
Q Consensus 29 v~vD~~~~~VtV~g~~dp~~l~~~l~kk~Gk 59 (96)
+++|.+++.|+|...+....|.+++. +.|.
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~-~~Gl 30 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLA-GTGL 30 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHT-TTTE
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHH-HcCC
Confidence 46899999999999999999999998 7776
No 111
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=20.58 E-value=1.6e+02 Score=18.04 Aligned_cols=28 Identities=11% Similarity=0.176 Sum_probs=19.5
Q ss_pred HHHhcCCCceEEEEEcCCCEEEEEeeCCH
Q 034383 18 RILLNMKEIEAHLIEKQQCRVSVCGRFRP 46 (96)
Q Consensus 18 k~L~~l~GV~~v~vD~~~~~VtV~g~~dp 46 (96)
+.+..+ |-.++.+..+..+|||+|.+.-
T Consensus 69 kvfael-gyndinvtfdgdtvtvegqleg 96 (106)
T 1qys_A 69 KVFAEL-GYNDINVTFDGDTVTVEGQLEG 96 (106)
T ss_dssp HHHHHT-TCCEEEEEEETTEEEEEEEC--
T ss_pred HHHHHh-CCcceeEEEcCCeEEEEeEEcC
Confidence 344444 6778888888889999988754
No 112
>2zzt_A Putative uncharacterized protein; cation diffusion facilitator (CDF), transporter, zinc, membrane protein, cytosolic domain; 2.84A {Thermotoga maritima}
Probab=20.58 E-value=76 Score=19.17 Aligned_cols=17 Identities=6% Similarity=0.145 Sum_probs=14.1
Q ss_pred HHHHHHHHhcCCCceEE
Q 034383 13 CRKLRRILLNMKEIEAH 29 (96)
Q Consensus 13 ~~kI~k~L~~l~GV~~v 29 (96)
..+|++.|..++||.++
T Consensus 12 ~~~I~~~l~~~~gV~~v 28 (107)
T 2zzt_A 12 YDDIFAVLERFPNVHNP 28 (107)
T ss_dssp HHHHHHHHTTCSSCEEE
T ss_pred HHHHHHHHHcCCCcccc
Confidence 46799999999998765
No 113
>3f8x_A Putative delta-5-3-ketosteroid isomerase; structural genomics, joint center for structural genomics; HET: MSE; 1.55A {Pectobacterium atrosepticum SCRI1043}
Probab=20.54 E-value=45 Score=21.56 Aligned_cols=37 Identities=11% Similarity=0.179 Sum_probs=29.5
Q ss_pred cCCCceEEEEEcCCCEEEEEeeCCHHHHHHHHHHhcC
Q 034383 22 NMKEIEAHLIEKQQCRVSVCGRFRPSDVAIKIRKKMN 58 (96)
Q Consensus 22 ~l~GV~~v~vD~~~~~VtV~g~~dp~~l~~~l~kk~G 58 (96)
.+.||.-+.+|.+.....+..-++|...+.+|..+.|
T Consensus 104 ~v~Gvdvl~~d~dGkI~~~~~~~~P~~~~~~l~~~m~ 140 (148)
T 3f8x_A 104 LLTGVDLIEFNDAGKITDLVVMMRPASVVIDLSVEVG 140 (148)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEECHHHHHHHHHHHH
T ss_pred EEEEEEEEEECCCCcEEEEEEEEchHHHHHHHHHHHH
Confidence 3567888888877778888888999999988886555
No 114
>2y9j_Y Lipoprotein PRGK, protein PRGK; protein transport, type III secretion, IR1, inner membrane R C24-fold; 6.40A {Salmonella enterica subsp}
Probab=20.29 E-value=87 Score=21.00 Aligned_cols=19 Identities=16% Similarity=0.254 Sum_probs=14.8
Q ss_pred HHHHHHHHhcCCCceEEEE
Q 034383 13 CRKLRRILLNMKEIEAHLI 31 (96)
Q Consensus 13 ~~kI~k~L~~l~GV~~v~v 31 (96)
+..+.+.|+.|+||.+..|
T Consensus 90 e~ELartI~~i~gV~~ArV 108 (170)
T 2y9j_Y 90 EQRLEQSLQTMEGVLSARV 108 (170)
T ss_dssp HHHHHHHHTTSTTEEEEEE
T ss_pred HHHHHHHHHcCCCeeEEEE
Confidence 3567889999999987554
No 115
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=20.13 E-value=1.3e+02 Score=16.82 Aligned_cols=27 Identities=11% Similarity=0.199 Sum_probs=19.5
Q ss_pred HHHhcCCCceEEEEEcCCCEEEEEeeCC
Q 034383 18 RILLNMKEIEAHLIEKQQCRVSVCGRFR 45 (96)
Q Consensus 18 k~L~~l~GV~~v~vD~~~~~VtV~g~~d 45 (96)
+.+..+ |-.++.+.-+..+|||+|.+.
T Consensus 25 kvfael-gyndinvtwdgdtvtvegqle 51 (62)
T 2gjh_A 25 KVFAEL-GYNDINVTWDGDTVTVEGQLE 51 (62)
T ss_dssp HHHHHT-TCCSCEEEECSSCEEEEEECC
T ss_pred HHHHHh-CcccceeEEcCCEEEEEeEEc
Confidence 344444 667778888888999998754
No 116
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=20.07 E-value=1.8e+02 Score=18.40 Aligned_cols=26 Identities=8% Similarity=0.028 Sum_probs=18.2
Q ss_pred ccchhhHHHHHHHHhcCCCceEEEEEcC
Q 034383 7 LDCNGCCRKLRRILLNMKEIEAHLIEKQ 34 (96)
Q Consensus 7 M~C~~C~~kI~k~L~~l~GV~~v~vD~~ 34 (96)
-.|..|.+ +++.|..+ ||.-..+|..
T Consensus 48 ~~Cp~C~~-ak~~L~~~-gv~y~~vdI~ 73 (135)
T 2wci_A 48 PSCGFSAQ-AVQALAAC-GERFAYVDIL 73 (135)
T ss_dssp BSSHHHHH-HHHHHHTT-CSCCEEEEGG
T ss_pred CCCccHHH-HHHHHHHc-CCceEEEECC
Confidence 36999985 67778776 7765566654
Done!