BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034386
(96 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255543032|ref|XP_002512579.1| conserved hypothetical protein [Ricinus communis]
gi|223548540|gb|EEF50031.1| conserved hypothetical protein [Ricinus communis]
Length = 96
Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/96 (89%), Positives = 92/96 (95%)
Query: 1 MALRRFFGFSDGELMRSDAKPCSRLMRQTAGIFTVGGALGFWVLCRLHYGPRVTVPRSLR 60
MALRRFFGFSDGELMRSD KPCSRLMRQTAG+F+VGGALGFW+LCRLHYGPR+TVPRSLR
Sbjct: 1 MALRRFFGFSDGELMRSDCKPCSRLMRQTAGVFSVGGALGFWILCRLHYGPRITVPRSLR 60
Query: 61 WAGCGAVSVSSTTALLVRLFSPECEPQNIAAYDRGK 96
WA CGA+S SSTTALLVRLFSPECEPQNIAA+DR K
Sbjct: 61 WATCGAISTSSTTALLVRLFSPECEPQNIAAFDRAK 96
>gi|297853586|ref|XP_002894674.1| hypothetical protein ARALYDRAFT_474839 [Arabidopsis lyrata subsp.
lyrata]
gi|297340516|gb|EFH70933.1| hypothetical protein ARALYDRAFT_474839 [Arabidopsis lyrata subsp.
lyrata]
Length = 103
Score = 177 bits (449), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 83/96 (86%), Positives = 91/96 (94%)
Query: 1 MALRRFFGFSDGELMRSDAKPCSRLMRQTAGIFTVGGALGFWVLCRLHYGPRVTVPRSLR 60
MALR+ G+S+G+LMRSDAKPCSRLMRQTA IFTVGGALGFWVLCRLHYGPR+TVPRSLR
Sbjct: 1 MALRQKLGWSEGDLMRSDAKPCSRLMRQTAAIFTVGGALGFWVLCRLHYGPRITVPRSLR 60
Query: 61 WAGCGAVSVSSTTALLVRLFSPECEPQNIAAYDRGK 96
WAGCGAVSVS++TA+LVRLFSPECEPQNIAAYD K
Sbjct: 61 WAGCGAVSVSTSTAMLVRLFSPECEPQNIAAYDHIK 96
>gi|18405948|ref|NP_564723.1| uncharacterized protein [Arabidopsis thaliana]
gi|42571903|ref|NP_974042.1| uncharacterized protein [Arabidopsis thaliana]
gi|145325455|ref|NP_001077732.1| uncharacterized protein [Arabidopsis thaliana]
gi|12321338|gb|AAG50734.1|AC079733_2 hypothetical protein [Arabidopsis thaliana]
gi|26449333|dbj|BAC41794.1| unknown protein [Arabidopsis thaliana]
gi|28416813|gb|AAO42937.1| At1g57540 [Arabidopsis thaliana]
gi|332195310|gb|AEE33431.1| uncharacterized protein [Arabidopsis thaliana]
gi|332195311|gb|AEE33432.1| uncharacterized protein [Arabidopsis thaliana]
gi|332195312|gb|AEE33433.1| uncharacterized protein [Arabidopsis thaliana]
Length = 103
Score = 175 bits (443), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 81/96 (84%), Positives = 91/96 (94%)
Query: 1 MALRRFFGFSDGELMRSDAKPCSRLMRQTAGIFTVGGALGFWVLCRLHYGPRVTVPRSLR 60
MALR+ G+S+G+LMRSDAKPCSRLM+QTA IFTVGGALGFWVLCRLHYGPR+TVPRSLR
Sbjct: 1 MALRQKLGWSEGDLMRSDAKPCSRLMKQTAAIFTVGGALGFWVLCRLHYGPRITVPRSLR 60
Query: 61 WAGCGAVSVSSTTALLVRLFSPECEPQNIAAYDRGK 96
WAGCGA+SVS++TA+LVRLFSPECEPQNIAAYD K
Sbjct: 61 WAGCGALSVSTSTAMLVRLFSPECEPQNIAAYDNIK 96
>gi|224124318|ref|XP_002329993.1| predicted protein [Populus trichocarpa]
gi|222871418|gb|EEF08549.1| predicted protein [Populus trichocarpa]
Length = 96
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/96 (84%), Positives = 88/96 (91%)
Query: 1 MALRRFFGFSDGELMRSDAKPCSRLMRQTAGIFTVGGALGFWVLCRLHYGPRVTVPRSLR 60
MALRR GFSDGELMRSD KPCSRLMRQTAGIF+VGGA GFW+LCRLHYGPR+T PRSLR
Sbjct: 1 MALRRLCGFSDGELMRSDCKPCSRLMRQTAGIFSVGGAFGFWILCRLHYGPRITNPRSLR 60
Query: 61 WAGCGAVSVSSTTALLVRLFSPECEPQNIAAYDRGK 96
WA CGA++ SST+ALLVRLFSPECEPQNIAAYD+ K
Sbjct: 61 WAACGAIAWSSTSALLVRLFSPECEPQNIAAYDKVK 96
>gi|351721492|ref|NP_001236699.1| uncharacterized protein LOC100305789 [Glycine max]
gi|356575285|ref|XP_003555772.1| PREDICTED: uncharacterized protein LOC100793929 [Glycine max]
gi|255626607|gb|ACU13648.1| unknown [Glycine max]
Length = 96
Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 79/93 (84%), Positives = 86/93 (92%)
Query: 1 MALRRFFGFSDGELMRSDAKPCSRLMRQTAGIFTVGGALGFWVLCRLHYGPRVTVPRSLR 60
M+LRRF G+SDGE+MRSDAKPCSRLMR TA IF+VGGALGFWVLCR+HYGPR+T PRSLR
Sbjct: 1 MSLRRFLGYSDGEVMRSDAKPCSRLMRHTAAIFSVGGALGFWVLCRMHYGPRITNPRSLR 60
Query: 61 WAGCGAVSVSSTTALLVRLFSPECEPQNIAAYD 93
WA CGAV+ SS TALLVRLFSPECEPQNIAAYD
Sbjct: 61 WAACGAVTASSGTALLVRLFSPECEPQNIAAYD 93
>gi|297596447|ref|NP_001042596.2| Os01g0250600 [Oryza sativa Japonica Group]
gi|56783806|dbj|BAD81218.1| unknown protein [Oryza sativa Japonica Group]
gi|125569745|gb|EAZ11260.1| hypothetical protein OsJ_01111 [Oryza sativa Japonica Group]
gi|215678833|dbj|BAG95270.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215686488|dbj|BAG87749.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673063|dbj|BAF04510.2| Os01g0250600 [Oryza sativa Japonica Group]
Length = 100
Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 77/94 (81%), Positives = 88/94 (93%)
Query: 1 MALRRFFGFSDGELMRSDAKPCSRLMRQTAGIFTVGGALGFWVLCRLHYGPRVTVPRSLR 60
MALRR G+S+GE+MR ++KPCSRLMRQTAG+F+VGGAL FWVLCRLHYGPR+TVPRSLR
Sbjct: 1 MALRRALGWSEGEVMRPESKPCSRLMRQTAGVFSVGGALSFWVLCRLHYGPRITVPRSLR 60
Query: 61 WAGCGAVSVSSTTALLVRLFSPECEPQNIAAYDR 94
WA CGA+SVSS +ALLVRLFSPECEPQNIAAYD+
Sbjct: 61 WASCGAISVSSASALLVRLFSPECEPQNIAAYDK 94
>gi|125525198|gb|EAY73312.1| hypothetical protein OsI_01186 [Oryza sativa Indica Group]
Length = 100
Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 76/94 (80%), Positives = 88/94 (93%)
Query: 1 MALRRFFGFSDGELMRSDAKPCSRLMRQTAGIFTVGGALGFWVLCRLHYGPRVTVPRSLR 60
MALRR G+S+GE+MR ++KPCSRLMRQTAG+F+VGGAL FWVLCR+HYGPR+TVPRSLR
Sbjct: 1 MALRRALGWSEGEVMRPESKPCSRLMRQTAGVFSVGGALSFWVLCRIHYGPRITVPRSLR 60
Query: 61 WAGCGAVSVSSTTALLVRLFSPECEPQNIAAYDR 94
WA CGA+SVSS +ALLVRLFSPECEPQNIAAYD+
Sbjct: 61 WASCGAISVSSASALLVRLFSPECEPQNIAAYDK 94
>gi|388511773|gb|AFK43948.1| unknown [Medicago truncatula]
Length = 96
Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 77/96 (80%), Positives = 87/96 (90%)
Query: 1 MALRRFFGFSDGELMRSDAKPCSRLMRQTAGIFTVGGALGFWVLCRLHYGPRVTVPRSLR 60
M+LRRF GFS+G++MRSD KPCSRLMR TAGIF+VGGAL FWVLCR+HYGPR+ +PRSLR
Sbjct: 1 MSLRRFLGFSEGDVMRSDCKPCSRLMRHTAGIFSVGGALRFWVLCRMHYGPRIQIPRSLR 60
Query: 61 WAGCGAVSVSSTTALLVRLFSPECEPQNIAAYDRGK 96
WA CGAV+VSS+TAL VRLFSPECEPQNIAAYD K
Sbjct: 61 WAACGAVTVSSSTALPVRLFSPECEPQNIAAYDNKK 96
>gi|413936692|gb|AFW71243.1| hypothetical protein ZEAMMB73_291095 [Zea mays]
Length = 135
Score = 167 bits (424), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 76/94 (80%), Positives = 88/94 (93%)
Query: 1 MALRRFFGFSDGELMRSDAKPCSRLMRQTAGIFTVGGALGFWVLCRLHYGPRVTVPRSLR 60
MALRR G+S+GE+MR ++KPCSRLMRQTAGIF+VGG L FWVLCRLHYGPR+TVPRSLR
Sbjct: 36 MALRRALGWSEGEVMRPESKPCSRLMRQTAGIFSVGGGLAFWVLCRLHYGPRITVPRSLR 95
Query: 61 WAGCGAVSVSSTTALLVRLFSPECEPQNIAAYDR 94
WA CGAVS+S+T+ALLVRLFSPECEPQNIAA+D+
Sbjct: 96 WASCGAVSMSATSALLVRLFSPECEPQNIAAFDK 129
>gi|449453986|ref|XP_004144737.1| PREDICTED: uncharacterized protein LOC101221073 [Cucumis sativus]
Length = 97
Score = 167 bits (423), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 77/96 (80%), Positives = 87/96 (90%)
Query: 1 MALRRFFGFSDGELMRSDAKPCSRLMRQTAGIFTVGGALGFWVLCRLHYGPRVTVPRSLR 60
MALRR GFSDGE+MRSDAKPCS+LM+QTAG+ +V GALGFW+LCRLHYGPR+TV RSLR
Sbjct: 1 MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60
Query: 61 WAGCGAVSVSSTTALLVRLFSPECEPQNIAAYDRGK 96
WA CGA S+S+T+ALLVRLFSPECEPQNIAAYD K
Sbjct: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRK 96
>gi|413936691|gb|AFW71242.1| hypothetical protein ZEAMMB73_291095 [Zea mays]
Length = 100
Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 76/94 (80%), Positives = 88/94 (93%)
Query: 1 MALRRFFGFSDGELMRSDAKPCSRLMRQTAGIFTVGGALGFWVLCRLHYGPRVTVPRSLR 60
MALRR G+S+GE+MR ++KPCSRLMRQTAGIF+VGG L FWVLCRLHYGPR+TVPRSLR
Sbjct: 1 MALRRALGWSEGEVMRPESKPCSRLMRQTAGIFSVGGGLAFWVLCRLHYGPRITVPRSLR 60
Query: 61 WAGCGAVSVSSTTALLVRLFSPECEPQNIAAYDR 94
WA CGAVS+S+T+ALLVRLFSPECEPQNIAA+D+
Sbjct: 61 WASCGAVSMSATSALLVRLFSPECEPQNIAAFDK 94
>gi|226495153|ref|NP_001144560.1| uncharacterized protein LOC100277564 [Zea mays]
gi|195643788|gb|ACG41362.1| hypothetical protein [Zea mays]
Length = 100
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 75/94 (79%), Positives = 87/94 (92%)
Query: 1 MALRRFFGFSDGELMRSDAKPCSRLMRQTAGIFTVGGALGFWVLCRLHYGPRVTVPRSLR 60
MALRR G+S+GE+MR ++KPCSRLMRQTAGIF+VGG L WVLCRLHYGPR+TVPRSLR
Sbjct: 1 MALRRALGWSEGEVMRPESKPCSRLMRQTAGIFSVGGGLALWVLCRLHYGPRITVPRSLR 60
Query: 61 WAGCGAVSVSSTTALLVRLFSPECEPQNIAAYDR 94
WA CGAVS+S+T+ALLVRLFSPECEPQNIAA+D+
Sbjct: 61 WASCGAVSMSATSALLVRLFSPECEPQNIAAFDK 94
>gi|357129431|ref|XP_003566365.1| PREDICTED: uncharacterized protein LOC100824486 [Brachypodium
distachyon]
Length = 100
Score = 164 bits (415), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 75/94 (79%), Positives = 85/94 (90%)
Query: 1 MALRRFFGFSDGELMRSDAKPCSRLMRQTAGIFTVGGALGFWVLCRLHYGPRVTVPRSLR 60
MA R+ G+S+GE+MR ++KPCSRLMR TAGIF+VGGAL FWVLCRLHYGPR+TVPRSLR
Sbjct: 1 MACRQALGWSEGEVMRPESKPCSRLMRHTAGIFSVGGALAFWVLCRLHYGPRITVPRSLR 60
Query: 61 WAGCGAVSVSSTTALLVRLFSPECEPQNIAAYDR 94
WA CG +S SST+ALLVRLFSPECEPQNIAAYDR
Sbjct: 61 WASCGVISTSSTSALLVRLFSPECEPQNIAAYDR 94
>gi|326511625|dbj|BAJ91957.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 111
Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 72/94 (76%), Positives = 84/94 (89%)
Query: 1 MALRRFFGFSDGELMRSDAKPCSRLMRQTAGIFTVGGALGFWVLCRLHYGPRVTVPRSLR 60
M+LR+ G+SDGE+MR ++KPCSRLMR TAGIF+VGG L FWVLCRLHYGPR+TVPRSLR
Sbjct: 12 MSLRQLLGWSDGEVMRPESKPCSRLMRHTAGIFSVGGGLAFWVLCRLHYGPRITVPRSLR 71
Query: 61 WAGCGAVSVSSTTALLVRLFSPECEPQNIAAYDR 94
WA CGA+ S+T A+LVRLFSPECEPQNIAA+DR
Sbjct: 72 WASCGAIGTSATAAMLVRLFSPECEPQNIAAFDR 105
>gi|225450442|ref|XP_002279694.1| PREDICTED: uncharacterized protein LOC100249447 [Vitis vinifera]
gi|296089850|emb|CBI39669.3| unnamed protein product [Vitis vinifera]
Length = 96
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/96 (85%), Positives = 88/96 (91%)
Query: 1 MALRRFFGFSDGELMRSDAKPCSRLMRQTAGIFTVGGALGFWVLCRLHYGPRVTVPRSLR 60
MALRR FGFSDGELMRSDAKPCSRLM+QTAG+FTVGG FW+LCRLHYGPR+TVPRSLR
Sbjct: 1 MALRRLFGFSDGELMRSDAKPCSRLMKQTAGLFTVGGGFAFWILCRLHYGPRITVPRSLR 60
Query: 61 WAGCGAVSVSSTTALLVRLFSPECEPQNIAAYDRGK 96
WA CGAVSVSS++ALLVRLFSP CEPQNIAAYD K
Sbjct: 61 WAACGAVSVSSSSALLVRLFSPACEPQNIAAYDNKK 96
>gi|242052017|ref|XP_002455154.1| hypothetical protein SORBIDRAFT_03g005200 [Sorghum bicolor]
gi|241927129|gb|EES00274.1| hypothetical protein SORBIDRAFT_03g005200 [Sorghum bicolor]
Length = 101
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/95 (75%), Positives = 84/95 (88%), Gaps = 1/95 (1%)
Query: 1 MALRRFFGFSDGELMRSDAKPCSRLMRQTAGIFTVGGALGFWVLCRLHYGPRVTVPRSLR 60
MALR G+S+GE+MR ++KPCSRLM QTAGIF+ GGAL FWVLCRLHYGP++TVPRSLR
Sbjct: 1 MALREALGWSEGEVMRPESKPCSRLMSQTAGIFSTGGALAFWVLCRLHYGPKITVPRSLR 60
Query: 61 WAGCGAVSVSSTTALLVRLFSPECEPQN-IAAYDR 94
WA CGA+S+S T+ALLVR FSPECEPQN IAAYD+
Sbjct: 61 WASCGAISMSLTSALLVRSFSPECEPQNIIAAYDK 95
>gi|147780253|emb|CAN65746.1| hypothetical protein VITISV_037764 [Vitis vinifera]
Length = 96
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/96 (84%), Positives = 87/96 (90%)
Query: 1 MALRRFFGFSDGELMRSDAKPCSRLMRQTAGIFTVGGALGFWVLCRLHYGPRVTVPRSLR 60
MALR FGFSDGELMRSDAKPCSRLM+QTAG+FTVGG FW+LCRLHYGPR+TVPRSLR
Sbjct: 1 MALRHLFGFSDGELMRSDAKPCSRLMKQTAGLFTVGGGFAFWILCRLHYGPRITVPRSLR 60
Query: 61 WAGCGAVSVSSTTALLVRLFSPECEPQNIAAYDRGK 96
WA CGAVSVSS++ALLVRLFSP CEPQNIAAYD K
Sbjct: 61 WAACGAVSVSSSSALLVRLFSPACEPQNIAAYDNKK 96
>gi|242052453|ref|XP_002455372.1| hypothetical protein SORBIDRAFT_03g009500 [Sorghum bicolor]
gi|241927347|gb|EES00492.1| hypothetical protein SORBIDRAFT_03g009500 [Sorghum bicolor]
Length = 101
Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/95 (74%), Positives = 83/95 (87%), Gaps = 1/95 (1%)
Query: 1 MALRRFFGFSDGELMRSDAKPCSRLMRQTAGIFTVGGALGFWVLCRLHYGPRVTVPRSLR 60
MAL G+S+GE+MR ++KPCSRLM QTAGIF+ GGAL FWVLCRLHYGP++TVPRSLR
Sbjct: 1 MALLEALGWSEGEVMRPESKPCSRLMSQTAGIFSTGGALAFWVLCRLHYGPKITVPRSLR 60
Query: 61 WAGCGAVSVSSTTALLVRLFSPECEPQN-IAAYDR 94
WA CGA+S+S T+ALLVR FSPECEPQN IAAYD+
Sbjct: 61 WASCGAISMSLTSALLVRSFSPECEPQNIIAAYDK 95
>gi|294463509|gb|ADE77284.1| unknown [Picea sitchensis]
Length = 98
Score = 147 bits (371), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 66/94 (70%), Positives = 80/94 (85%)
Query: 1 MALRRFFGFSDGELMRSDAKPCSRLMRQTAGIFTVGGALGFWVLCRLHYGPRVTVPRSLR 60
M+LR+FFG S+GELMR DAKPCS +MRQTA IF +GGAL FW ++HYGPR+T PR++R
Sbjct: 1 MSLRQFFGLSNGELMRPDAKPCSAMMRQTASIFGIGGALVFWTFSKVHYGPRITFPRAVR 60
Query: 61 WAGCGAVSVSSTTALLVRLFSPECEPQNIAAYDR 94
W CGAV+ SS+TALLVRLFS ECEPQN+AAYD+
Sbjct: 61 WGLCGAVTGSSSTALLVRLFSTECEPQNVAAYDK 94
>gi|320168974|gb|EFW45873.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 118
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%)
Query: 11 DGELMRSDAKPCSRLMRQTAGIFTVGGALGFWVLCRLHYGPRVTVPRSLRWAGCGAVSVS 70
D +MR+ A PC+ +MR +A + +GG + +L RL +G T + R GAV +
Sbjct: 30 DDAVMRARATPCATIMRISAALGAIGGGMSGPLLTRLMHGFSNTPAQRRRTMVLGAVVGA 89
Query: 71 STTALLVRLFSPECEPQNIAAYD 93
+ SP C N AYD
Sbjct: 90 MVVPYITFHISPNCSEINRRAYD 112
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.327 0.140 0.454
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,458,216,804
Number of Sequences: 23463169
Number of extensions: 48314911
Number of successful extensions: 118124
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 118104
Number of HSP's gapped (non-prelim): 20
length of query: 96
length of database: 8,064,228,071
effective HSP length: 65
effective length of query: 31
effective length of database: 6,539,122,086
effective search space: 202712784666
effective search space used: 202712784666
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 69 (31.2 bits)