Query 034386
Match_columns 96
No_of_seqs 14 out of 16
Neff 1.8
Searched_HMMs 13730
Date Mon Mar 25 22:18:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034386.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/034386hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1nlna_ d.3.1.7 (A:) Human ade 19.8 8.4 0.00061 27.6 -0.5 24 7-30 72-95 (203)
2 d1gula2 c.47.1.5 (A:4-80) Clas 15.7 12 0.00084 20.6 -0.5 18 46-63 3-20 (77)
3 d1c7ka_ d.92.1.1 (A:) Zinc pro 12.2 13 0.00098 25.0 -1.1 18 6-28 88-105 (132)
4 d1ttka_ g.3.6.1 (A:) Conotoxin 11.1 11 0.00081 19.3 -1.4 7 21-27 7-13 (26)
5 d1ly2a1 g.18.1.1 (A:0-66) Comp 10.6 21 0.0015 19.1 -0.5 7 82-88 61-67 (67)
6 d1qasa1 a.39.1.7 (A:205-298) P 9.3 69 0.005 17.9 1.6 18 72-89 68-85 (94)
7 d1xj3a1 d.110.3.2 (A:154-259) 9.2 29 0.0021 17.5 -0.2 16 2-17 18-33 (106)
8 d2gy9p1 d.27.1.1 (P:1-78) Ribo 9.2 33 0.0024 20.3 0.1 26 52-77 51-76 (78)
9 d1v9ya_ d.110.3.2 (A:) Direct 8.9 52 0.0038 16.8 0.8 14 2-15 29-42 (113)
10 d1jnua_ d.110.3.6 (A:) Photore 8.8 30 0.0022 18.3 -0.3 14 2-15 21-34 (104)
No 1
>d1nlna_ d.3.1.7 (A:) Human adenovirus 2 proteinase, adenain {Mastadenovirus H2 [TaxId: 10515]}
Probab=19.82 E-value=8.4 Score=27.59 Aligned_cols=24 Identities=38% Similarity=0.551 Sum_probs=15.2
Q ss_pred hcCCCCcccccCCchhHHHHHhhh
Q 034386 7 FGFSDGELMRSDAKPCSRLMRQTA 30 (96)
Q Consensus 7 ~g~sdgevMR~~akPCsrlMr~tA 30 (96)
|||||-++++--.--=.+|+|.||
T Consensus 72 fGfsd~~L~q~Y~FeY~~llkRSA 95 (203)
T d1nlna_ 72 FGFSDQRLKQVYQFEYESLLRRSA 95 (203)
T ss_dssp TCCCHHHHHHHHCCCCHHHHHHHH
T ss_pred CCCCHHHHHHHhhhhHHHHHHHHh
Confidence 788888887644444445555555
No 2
>d1gula2 c.47.1.5 (A:4-80) Class alpha GST {Human (Homo sapiens), (a1-1) [TaxId: 9606]}
Probab=15.75 E-value=12 Score=20.56 Aligned_cols=18 Identities=33% Similarity=0.528 Sum_probs=13.1
Q ss_pred HhhcCCCCCcccchhhhh
Q 034386 46 RLHYGPRVTVPRSLRWAG 63 (96)
Q Consensus 46 RlhyGpriT~prslRwa~ 63 (96)
+|||-|--...+..||+.
T Consensus 3 kL~yf~~~g~~~~vR~~L 20 (77)
T d1gula2 3 KLHYPNGRGRMESVRWVL 20 (77)
T ss_dssp EEEEESSCTTTHHHHHHH
T ss_pred EEEEcCCcchHHHHHHHH
Confidence 578877666677788875
No 3
>d1c7ka_ d.92.1.1 (A:) Zinc protease {Streptomyces caespitosus [TaxId: 53502]}
Probab=12.17 E-value=13 Score=24.97 Aligned_cols=18 Identities=39% Similarity=0.724 Sum_probs=12.3
Q ss_pred hhcCCCCcccccCCchhHHHHHh
Q 034386 6 FFGFSDGELMRSDAKPCSRLMRQ 28 (96)
Q Consensus 6 ~~g~sdgevMR~~akPCsrlMr~ 28 (96)
.||+.|- ..-|||.||.-
T Consensus 88 ~LGLPD~-----~~GpCS~LMSG 105 (132)
T d1c7ka_ 88 VLGLPDH-----YQGPCSELMSG 105 (132)
T ss_dssp HHTCCCC-----TTSCTTCGGGT
T ss_pred ccCCCCC-----CCCccHHhhCC
Confidence 4666553 35699999963
No 4
>d1ttka_ g.3.6.1 (A:) Conotoxin {Sea snail (Conus magus), M VIIa [TaxId: 6492]}
Probab=11.09 E-value=11 Score=19.35 Aligned_cols=7 Identities=71% Similarity=1.156 Sum_probs=4.8
Q ss_pred hhHHHHH
Q 034386 21 PCSRLMR 27 (96)
Q Consensus 21 PCsrlMr 27 (96)
-|||||-
T Consensus 7 kcsrlmy 13 (26)
T d1ttka_ 7 KCSRLMY 13 (26)
T ss_dssp BCCTTTC
T ss_pred cHhHHHH
Confidence 4788774
No 5
>d1ly2a1 g.18.1.1 (A:0-66) Complement receptor 2, cr2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.58 E-value=21 Score=19.12 Aligned_cols=7 Identities=57% Similarity=1.047 Sum_probs=4.8
Q ss_pred CCCccch
Q 034386 82 PECEPQN 88 (96)
Q Consensus 82 peCepqN 88 (96)
|.|++.|
T Consensus 61 P~C~~i~ 67 (67)
T d1ly2a1 61 PKCEYFN 67 (67)
T ss_dssp CEEEECC
T ss_pred CEeeECC
Confidence 6777765
No 6
>d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=9.29 E-value=69 Score=17.92 Aligned_cols=18 Identities=17% Similarity=0.333 Sum_probs=13.8
Q ss_pred hhhhhHHhcCCCCccchh
Q 034386 72 TTALLVRLFSPECEPQNI 89 (96)
Q Consensus 72 ~~allvrlfSpeCepqNi 89 (96)
.-+.+-.|+||++.+-|-
T Consensus 68 ~~gF~~fL~S~~N~i~~p 85 (94)
T d1qasa1 68 KDGFLMYLLSADGNAFSL 85 (94)
T ss_dssp HHHHHHHHHSSTTBSBCG
T ss_pred HHHHHHHHcCcccCCCCc
Confidence 356788899999987654
No 7
>d1xj3a1 d.110.3.2 (A:154-259) Histidine kinase FixL heme domain {Bradyrhizobium japonicum [TaxId: 375]}
Probab=9.17 E-value=29 Score=17.52 Aligned_cols=16 Identities=38% Similarity=0.627 Sum_probs=12.3
Q ss_pred hhhhhhcCCCCccccc
Q 034386 2 ALRRFFGFSDGELMRS 17 (96)
Q Consensus 2 ~lr~~~g~sdgevMR~ 17 (96)
+.-+.+|++..|++..
T Consensus 18 a~~~l~Gy~~~el~g~ 33 (106)
T d1xj3a1 18 AAERLFGWSELEAIGQ 33 (106)
T ss_dssp HHHHHHCCCHHHHTTS
T ss_pred HHHHHhhhchHhhcCC
Confidence 3467899999998763
No 8
>d2gy9p1 d.27.1.1 (P:1-78) Ribosomal protein S16 {Escherichia coli [TaxId: 562]}
Probab=9.15 E-value=33 Score=20.33 Aligned_cols=26 Identities=31% Similarity=0.552 Sum_probs=19.9
Q ss_pred CCCcccchhhhhcccchhhhhhhhhH
Q 034386 52 RVTVPRSLRWAGCGAVSVSSTTALLV 77 (96)
Q Consensus 52 riT~prslRwa~cGAv~~ss~~allv 77 (96)
.+...|-.-|.+.||--+-.+..||-
T Consensus 51 ~l~~eri~~Wl~~GAqps~~V~~LLk 76 (78)
T d2gy9p1 51 RLDLDRIAHWVGQGATISDRVAALIK 76 (78)
T ss_dssp ECCHHHHHHHTTTTCEECHHHHHHHH
T ss_pred EecHHHHHHHHHCcCcCCHHHHHHHh
Confidence 35567888999999988777776663
No 9
>d1v9ya_ d.110.3.2 (A:) Direct oxygen sensor protein, DOS {Escherichia coli [TaxId: 562]}
Probab=8.91 E-value=52 Score=16.75 Aligned_cols=14 Identities=21% Similarity=0.679 Sum_probs=11.1
Q ss_pred hhhhhhcCCCCccc
Q 034386 2 ALRRFFGFSDGELM 15 (96)
Q Consensus 2 ~lr~~~g~sdgevM 15 (96)
+..+.+|++..|+.
T Consensus 29 ~~~~l~Gy~~~e~~ 42 (113)
T d1v9ya_ 29 AAEKLWGYKREEVI 42 (113)
T ss_dssp HHHHHHSCCGGGTT
T ss_pred hHhhhhccchhhhc
Confidence 45688999988876
No 10
>d1jnua_ d.110.3.6 (A:) Photoreceptor phy3 flavin-binding domain, lov2 {Maidenhair fern (Adiantum capillus-veneris) [TaxId: 13818]}
Probab=8.80 E-value=30 Score=18.26 Aligned_cols=14 Identities=7% Similarity=0.294 Sum_probs=10.3
Q ss_pred hhhhhhcCCCCccc
Q 034386 2 ALRRFFGFSDGELM 15 (96)
Q Consensus 2 ~lr~~~g~sdgevM 15 (96)
|.-+.+|+|..|++
T Consensus 21 a~~~~~G~s~~e~~ 34 (104)
T d1jnua_ 21 RFLELTEYTREEVL 34 (104)
T ss_dssp HHHHHHTCCHHHHT
T ss_pred HHHHHHCcCHHHHC
Confidence 34577888888877
Done!