BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034388
MARSLFKAKLLLAPVADGISLSIGRGYAAAAPLGTISRTGIMEKNDLTPAVREDSGASSA
WAPDPITGYYRPENRAVEIDPAELREMLLNHKVRAH

High Scoring Gene Products

Symbol, full name Information P value
DI21
AT4G15910
protein from Arabidopsis thaliana 2.7e-13
SAG21
AT4G02380
protein from Arabidopsis thaliana 4.4e-13
LEA3
AT1G02820
protein from Arabidopsis thaliana 3.9e-12
AT3G53770 protein from Arabidopsis thaliana 1.1e-05
CPS_2809
Na+/H+ antiporter NhaC
protein from Colwellia psychrerythraea 34H 0.00075

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034388
        (96 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2129795 - symbol:DI21 "AT4G15910" species:3702...   174  2.7e-13   1
TAIR|locus:2133279 - symbol:SAG21 "AT4G02380" species:370...   172  4.4e-13   1
TAIR|locus:2024735 - symbol:LEA3 "AT1G02820" species:3702...   163  3.9e-12   1
TAIR|locus:2084450 - symbol:AT3G53770 "AT3G53770" species...   102  1.1e-05   1
TIGR_CMR|CPS_2809 - symbol:CPS_2809 "Na+/H+ antiporter Nh...    81  0.00075   2


>TAIR|locus:2129795 [details] [associations]
            symbol:DI21 "AT4G15910" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0009790 "embryo development"
            evidence=ISS] [GO:0009414 "response to water deprivation"
            evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
            evidence=IGI] InterPro:IPR004926 Pfam:PF03242 GO:GO:0009737
            EMBL:CP002687 GO:GO:0009414 EMBL:BT003165 EMBL:X78585
            IPI:IPI00529996 PIR:S51479 RefSeq:NP_193326.4 UniGene:At.48862
            STRING:Q39084 PRIDE:Q39084 EnsemblPlants:AT4G15910.1 GeneID:827273
            KEGG:ath:AT4G15910 TAIR:At4g15910 HOGENOM:HOG000237812 OMA:RRSYVAT
            PhylomeDB:Q39084 ProtClustDB:CLSN2927415 Genevestigator:Q39084
            Uniprot:Q39084
        Length = 104

 Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
 Identities = 45/103 (43%), Positives = 57/103 (55%)

Query:     2 ARSLFKAKLLLAPVADG-ISLSI--GRGYAAAAPLGTISRTGIMEKNDLTPAVRE----- 53
             ARSL  A   L   A G +S SI   R Y A +    ++  G+ +       V +     
Sbjct:     3 ARSLSGAVKSLCSAASGSLSCSIVLRRSYVATSQ--NVTAAGLSKGGSTRVMVGKMEQRG 60

Query:    54 -DSGASSAWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRA 95
              D  A SAW PDP+TGYYRP NRA EIDPAELRE+LL +K ++
Sbjct:    61 LDQEAESAWGPDPVTGYYRPSNRAAEIDPAELRELLLKNKAKS 103


>TAIR|locus:2133279 [details] [associations]
            symbol:SAG21 "AT4G02380" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0009790 "embryo development"
            evidence=ISS] [GO:0000302 "response to reactive oxygen species"
            evidence=IEP] [GO:0009409 "response to cold" evidence=IEP;RCA]
            [GO:0006979 "response to oxidative stress" evidence=RCA;IMP]
            [GO:0042631 "cellular response to water deprivation"
            evidence=IEP;RCA] [GO:0000165 "MAPK cascade" evidence=RCA]
            [GO:0006612 "protein targeting to membrane" evidence=RCA]
            [GO:0007154 "cell communication" evidence=RCA] [GO:0009611
            "response to wounding" evidence=RCA] [GO:0009738 "abscisic acid
            mediated signaling pathway" evidence=RCA] [GO:0009862 "systemic
            acquired resistance, salicylic acid mediated signaling pathway"
            evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
            pathway" evidence=RCA] [GO:0010363 "regulation of plant-type
            hypersensitive response" evidence=RCA] [GO:0016036 "cellular
            response to phosphate starvation" evidence=RCA] [GO:0019375
            "galactolipid biosynthetic process" evidence=RCA] [GO:0030968
            "endoplasmic reticulum unfolded protein response" evidence=RCA]
            [GO:0031348 "negative regulation of defense response" evidence=RCA]
            [GO:0043069 "negative regulation of programmed cell death"
            evidence=RCA] [GO:0050832 "defense response to fungus"
            evidence=RCA] InterPro:IPR004926 Pfam:PF03242 EMBL:CP002687
            GO:GO:0009409 GO:GO:0000302 GO:GO:0042631 EMBL:AY039589
            EMBL:AF410301 EMBL:AY052672 EMBL:AY054147 EMBL:AY086267
            EMBL:AY879295 IPI:IPI00541449 RefSeq:NP_567231.1 UniGene:At.24964
            STRING:Q93WF6 PRIDE:Q93WF6 EnsemblPlants:AT4G02380.1 GeneID:828053
            KEGG:ath:AT4G02380 TAIR:At4g02380 InParanoid:Q93WF6 OMA:ERVASSY
            PhylomeDB:Q93WF6 Genevestigator:Q93WF6 Uniprot:Q93WF6
        Length = 97

 Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
 Identities = 43/96 (44%), Positives = 58/96 (60%)

Query:     1 MARSLFKAKLLLAPVADGISLSI-GRGYAAAAPLGTIS---RTGIMEKNDLTPAVREDSG 56
             MARS+   K++ A V+  +S +I  RGYAA A  G++S   R+G +    +     E+S 
Sbjct:     1 MARSISNVKIVSAFVSRELSNAIFRRGYAATAAQGSVSSGGRSGAVASAVMKKKGVEEST 60

Query:    57 ASSAWAPDPITGYYRPENRAVEIDPAELREMLLNHK 92
                +W PDP TGYYRPE  + EID AELR  LLN+K
Sbjct:    61 QKISWVPDPKTGYYRPETGSNEIDAAELRAALLNNK 96


>TAIR|locus:2024735 [details] [associations]
            symbol:LEA3 "AT1G02820" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0009790 "embryo development"
            evidence=ISS] InterPro:IPR004926 Pfam:PF03242 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0006950 EMBL:AC009525
            HOGENOM:HOG000237812 EMBL:AY088824 EMBL:BT024641 EMBL:AK176747
            IPI:IPI00543545 PIR:D86158 RefSeq:NP_171781.1 UniGene:At.42577
            PRIDE:Q9SRX6 EnsemblPlants:AT1G02820.1 GeneID:839304
            KEGG:ath:AT1G02820 TAIR:At1g02820 eggNOG:NOG290276
            InParanoid:Q9SRX6 OMA:SSEKAPW PhylomeDB:Q9SRX6
            ProtClustDB:CLSN2679606 ArrayExpress:Q9SRX6 Genevestigator:Q9SRX6
            Uniprot:Q9SRX6
        Length = 91

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 40/93 (43%), Positives = 54/93 (58%)

Query:     1 MARSLFKAKLLLAPVADGISLSI-GRGYAAAAPLGTISRTGIMEKNDLTPAVREDSGASS 59
             MARSL  AK+     ++ +S ++  RG+AAAA        G +   ++     E S   +
Sbjct:     1 MARSLANAKIQSVFGSEKLSNAVFRRGFAAAAKTAL---DGSVSTAEMKKRAGEASSEKA 57

Query:    60 AWAPDPITGYYRPENRAVEIDPAELREMLLNHK 92
              W PDP TGYYRPE  + EIDPAELR +LLN+K
Sbjct:    58 PWVPDPKTGYYRPETVSEEIDPAELRAILLNNK 90


>TAIR|locus:2084450 [details] [associations]
            symbol:AT3G53770 "AT3G53770" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND]
            InterPro:IPR004926 Pfam:PF03242 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0006950 EMBL:AL132960 EMBL:DQ056621
            IPI:IPI00532799 PIR:T45917 RefSeq:NP_190945.1 UniGene:At.53923
            EnsemblPlants:AT3G53770.1 GeneID:824544 KEGG:ath:AT3G53770
            TAIR:At3g53770 eggNOG:NOG309790 HOGENOM:HOG000153243 OMA:YIVITKA
            PhylomeDB:Q9M349 ProtClustDB:CLSN2915620 ArrayExpress:Q9M349
            Genevestigator:Q9M349 Uniprot:Q9M349
        Length = 124

 Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 18/36 (50%), Positives = 23/36 (63%)

Query:    61 WAPDPITGYYRPENRAVEIDPAELREMLLNHKVRAH 96
             W PDP TGYYRP+N A E+D  ELR +  N   + +
Sbjct:    86 WMPDPQTGYYRPDNFARELDAVELRSLHFNKNQKTY 121

 Score = 84 (34.6 bits), Expect = 0.00093, P = 0.00093
 Identities = 14/22 (63%), Positives = 17/22 (77%)

Query:    60 AWAPDPITGYYRPENRAVEIDP 81
             +WA DP TGY+RPE  A E+DP
Sbjct:    45 SWASDPDTGYFRPETAAKELDP 66


>TIGR_CMR|CPS_2809 [details] [associations]
            symbol:CPS_2809 "Na+/H+ antiporter NhaC" species:167879
            "Colwellia psychrerythraea 34H" [GO:0006814 "sodium ion transport"
            evidence=ISS] [GO:0006818 "hydrogen transport" evidence=ISS]
            [GO:0015385 "sodium:hydrogen antiporter activity" evidence=ISS]
            InterPro:IPR004770 InterPro:IPR018461 Pfam:PF03553 GO:GO:0016021
            EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0015297
            eggNOG:COG1757 KO:K03315 RefSeq:YP_269521.1 STRING:Q480J8
            GeneID:3520912 KEGG:cps:CPS_2809 PATRIC:21468653
            HOGENOM:HOG000283662 OMA:GPNQIAL ProtClustDB:CLSK932722
            BioCyc:CPSY167879:GI48-2870-MONOMER TIGRFAMs:TIGR00931
            Uniprot:Q480J8
        Length = 492

 Score = 81 (33.6 bits), Expect = 0.00075, Sum P(2) = 0.00075
 Identities = 23/66 (34%), Positives = 35/66 (53%)

Query:    19 ISLSIGRGYAAAAPLGTISRTGIMEKNDLTPAVREDSGASSAWAPDPITGYYRPENRAVE 78
             +S+SIG  +  AA +G ++  GI +  DL+PAV   +  S A+  D I+      N A  
Sbjct:   128 VSMSIGSSWTTAATIG-VALIGIAQGLDLSPAVTAGAVISGAYFGDKISPLSETTNLAPA 186

Query:    79 IDPAEL 84
             I  +EL
Sbjct:   187 IAGSEL 192

 Score = 34 (17.0 bits), Expect = 0.00075, Sum P(2) = 0.00075
 Identities = 6/10 (60%), Positives = 9/10 (90%)

Query:    15 VADGISLSIG 24
             + +GISLS+G
Sbjct:    71 IVNGISLSLG 80


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.132   0.381    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       96        96   0.00091  102 3  11 22  0.39    30
                                                     29  0.43    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  530 (56 KB)
  Total size of DFA:  98 KB (2069 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.19u 0.16s 10.35t   Elapsed:  00:00:00
  Total cpu time:  10.19u 0.16s 10.35t   Elapsed:  00:00:00
  Start:  Fri May 10 23:15:20 2013   End:  Fri May 10 23:15:20 2013

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