BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 034388
         (96 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q39644|LEA5_CITSI Late embryogenesis abundant protein Lea5 OS=Citrus sinensis
          GN=LEA5 PE=2 SV=1
          Length = 97

 Score =  185 bits (469), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 94/97 (96%), Positives = 94/97 (96%), Gaps = 1/97 (1%)

Query: 1  MARSLFKAKLLLAPVADGISLSIGR-GYAAAAPLGTISRTGIMEKNDLTPAVREDSGASS 59
          MARSLFKAKLLLAPVADGISLSI R GYAAAAPLGTISRTGIMEKNDL PAVREDSGASS
Sbjct: 1  MARSLFKAKLLLAPVADGISLSISRRGYAAAAPLGTISRTGIMEKNDLRPAVREDSGASS 60

Query: 60 AWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRAH 96
          AWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRAH
Sbjct: 61 AWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRAH 97


>sp|P46522|LEA5D_GOSHI Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum
           GN=LEA5-D PE=2 SV=1
          Length = 105

 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 9/105 (8%)

Query: 1   MARSLFKAKLLLAPVADGISLSIGR-GYAAAAP---LGTISRTGIMEKNDLTPAVREDSG 56
           MARS+   KLL A + DG+ +SI R GY+ A P     +  R G M K +   A++E S 
Sbjct: 1   MARSVSSFKLLGASIFDGLYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRDAMKESSS 60

Query: 57  A-----SSAWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRAH 96
           +     SSAWAPDP+TGYYRPEN   EID AELREMLLNH+VR+ 
Sbjct: 61  SETRAYSSAWAPDPVTGYYRPENCGAEIDAAELREMLLNHRVRSQ 105


>sp|P46521|LEA5A_GOSHI Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum
           GN=LEA5-A PE=2 SV=1
          Length = 105

 Score = 92.0 bits (227), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 52/105 (49%), Positives = 66/105 (62%), Gaps = 9/105 (8%)

Query: 1   MARSLFKAKLLLAPVADGISLSIGR-GYAAAAP---LGTISRTGIMEKNDLTPAVREDSG 56
           MARS+   K L A V D + +SI R GY+ A P     +  R G M K +   A++E S 
Sbjct: 1   MARSVSSFKFLGASVFDALYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRYAMKESSS 60

Query: 57  A-----SSAWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRAH 96
           +     SSAWAPDP+TGYYRPEN   EID A+LREM+LNH+VR+ 
Sbjct: 61  SETRAYSSAWAPDPVTGYYRPENCGAEIDAADLREMMLNHRVRSQ 105


>sp|P32292|ARG2_VIGRR Indole-3-acetic acid-induced protein ARG2 OS=Vigna radiata var.
          radiata GN=ARG2 PE=2 SV=1
          Length = 99

 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/97 (43%), Positives = 55/97 (56%), Gaps = 6/97 (6%)

Query: 1  MARSLFKAKLLLAPVADGISLSIGR-GYAAAAP-LGTISRTGIMEKNDLTPAVRED---S 55
          MARS    K+L A VADG S +  R G+AAAA    + +R G     ++ P   E+    
Sbjct: 1  MARSFTNVKVLSALVADGFSNTTTRHGFAAAAAATQSATRGGASIGGNMVPKSGEEKVRG 60

Query: 56 GASSAWAPDPITGYYRPENRAVEIDPAELREMLLNHK 92
          G   +W PDP+TGYYRPEN   EID A++R  +L  K
Sbjct: 61 GEKVSWVPDPVTGYYRPENTN-EIDVADMRATVLGKK 96


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.316    0.132    0.381 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,152,221
Number of Sequences: 539616
Number of extensions: 1300437
Number of successful extensions: 3815
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 3806
Number of HSP's gapped (non-prelim): 11
length of query: 96
length of database: 191,569,459
effective HSP length: 66
effective length of query: 30
effective length of database: 155,954,803
effective search space: 4678644090
effective search space used: 4678644090
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)