BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034393
(96 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q792Q4|CRIPT_RAT Cysteine-rich PDZ-binding protein OS=Rattus norvegicus GN=Cript
PE=1 SV=1
Length = 101
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/101 (67%), Positives = 78/101 (77%), Gaps = 5/101 (4%)
Query: 1 MVCEKCEKKLSKVIVPDKWKEGASNTTEAGGRKVNENK-LLSKKKRWTPYGNTK---CII 56
MVCEKCEKKL +VI PD WK+GA NTTE+GGRK+NENK L SKK R+ PYG K C I
Sbjct: 1 MVCEKCEKKLGRVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI 60
Query: 57 CKQQVHQD-AKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV 96
CK VHQ + YC CAY KG+CAMCGK+VLDTK YKQ++V
Sbjct: 61 CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTSV 101
>sp|O70333|CRIPT_MOUSE Cysteine-rich PDZ-binding protein OS=Mus musculus GN=Cript PE=1
SV=1
Length = 101
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/101 (67%), Positives = 78/101 (77%), Gaps = 5/101 (4%)
Query: 1 MVCEKCEKKLSKVIVPDKWKEGASNTTEAGGRKVNENK-LLSKKKRWTPYGNTK---CII 56
MVCEKCEKKL +VI PD WK+GA NTTE+GGRK+NENK L SKK R+ PYG K C I
Sbjct: 1 MVCEKCEKKLGRVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI 60
Query: 57 CKQQVHQD-AKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV 96
CK VHQ + YC CAY KG+CAMCGK+VLDTK YKQ++V
Sbjct: 61 CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTSV 101
>sp|Q567Z6|CRIPT_DANRE Cysteine-rich PDZ-binding protein OS=Danio rerio GN=cript PE=3 SV=1
Length = 101
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/101 (65%), Positives = 79/101 (78%), Gaps = 5/101 (4%)
Query: 1 MVCEKCEKKLSKVIVPDKWKEGASNTTEAGGRKVNENKLL-SKKKRWTPYGNT---KCII 56
MVCEKCEKKL +VI PD WK+GA NTTE+GGRK+NENK+L SKK R+ PYG + C I
Sbjct: 1 MVCEKCEKKLGRVITPDTWKDGARNTTESGGRKLNENKMLTSKKARFDPYGKSGFATCRI 60
Query: 57 CKQQVHQD-AKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV 96
CK VHQ + YC CAY KG+CAMCGK+V+DTK YKQ++V
Sbjct: 61 CKSSVHQSGSHYCQGCAYKKGICAMCGKKVIDTKNYKQTSV 101
>sp|Q9P021|CRIPT_HUMAN Cysteine-rich PDZ-binding protein OS=Homo sapiens GN=CRIPT PE=1
SV=1
Length = 101
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/101 (67%), Positives = 77/101 (76%), Gaps = 5/101 (4%)
Query: 1 MVCEKCEKKLSKVIVPDKWKEGASNTTEAGGRKVNENK-LLSKKKRWTPYGNTK---CII 56
MVCEKCEKKL VI PD WK+GA NTTE+GGRK+NENK L SKK R+ PYG K C I
Sbjct: 1 MVCEKCEKKLGTVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI 60
Query: 57 CKQQVHQD-AKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV 96
CK VHQ + YC CAY KG+CAMCGK+VLDTK YKQ++V
Sbjct: 61 CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTSV 101
>sp|Q3ZC66|CRIPT_BOVIN Cysteine-rich PDZ-binding protein OS=Bos taurus GN=CRIPT PE=1 SV=1
Length = 101
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/101 (67%), Positives = 77/101 (76%), Gaps = 5/101 (4%)
Query: 1 MVCEKCEKKLSKVIVPDKWKEGASNTTEAGGRKVNENK-LLSKKKRWTPYGNTK---CII 56
MVCEKCEKKL VI PD WK+GA NTTE+GGRK+NENK L SKK R+ PYG K C I
Sbjct: 1 MVCEKCEKKLGTVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI 60
Query: 57 CKQQVHQD-AKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV 96
CK VHQ + YC CAY KG+CAMCGK+VLDTK YKQ++V
Sbjct: 61 CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTSV 101
>sp|Q1WCC0|CRIPT_ICTPU Cysteine-rich PDZ-binding protein OS=Ictalurus punctatus GN=cript
PE=3 SV=1
Length = 101
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 66/101 (65%), Positives = 77/101 (76%), Gaps = 5/101 (4%)
Query: 1 MVCEKCEKKLSKVIVPDKWKEGASNTTEAGGRKVNENKLL-SKKKRWTPYGN---TKCII 56
MVCEKCEKKL +VI PD WK+GA NTTE+GGRK+NENK+L SKK + PYG + C I
Sbjct: 1 MVCEKCEKKLGRVITPDTWKDGARNTTESGGRKINENKMLTSKKAGFDPYGKSGFSTCRI 60
Query: 57 CKQQVHQDAK-YCHTCAYSKGVCAMCGKQVLDTKFYKQSNV 96
CK VHQ YC CAY KG+CAMCGK+VLDTK YKQ++V
Sbjct: 61 CKSSVHQSGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTSV 101
>sp|Q5ZKB6|CRIPT_CHICK Cysteine-rich PDZ-binding protein OS=Gallus gallus GN=CRIPT PE=3
SV=1
Length = 101
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/101 (65%), Positives = 77/101 (76%), Gaps = 5/101 (4%)
Query: 1 MVCEKCEKKLSKVIVPDKWKEGASNTTEAGGRKVNENK-LLSKKKRWTPYGNTK---CII 56
MVCEKCE+KL VI PD WK+GA NTTE+GGRK+NENK L SKK R+ PYG K C I
Sbjct: 1 MVCEKCERKLGTVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFAICRI 60
Query: 57 CKQQVHQD-AKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV 96
CK VHQ + YC CAY KG+C+MCGK+VLDTK YKQ++V
Sbjct: 61 CKSSVHQPGSHYCQGCAYKKGICSMCGKKVLDTKNYKQTSV 101
>sp|Q6NU28|CRIPT_XENLA Cysteine-rich PDZ-binding protein OS=Xenopus laevis GN=cript PE=3
SV=1
Length = 101
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/101 (64%), Positives = 75/101 (74%), Gaps = 5/101 (4%)
Query: 1 MVCEKCEKKLSKVIVPDKWKEGASNTTEAGGRKVNENK-LLSKKKRWTPYGNTK---CII 56
MVC+KCEKKL VI PD WK GA NTTE+GGRK+NENK L SK R+ PYG K C I
Sbjct: 1 MVCDKCEKKLGTVITPDTWKSGARNTTESGGRKLNENKALTSKTARFNPYGKNKFAICRI 60
Query: 57 CKQQVHQ-DAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV 96
CK VHQ + YC CAY KG+CAMCGK+VL+TK YKQ++V
Sbjct: 61 CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLETKNYKQTSV 101
>sp|Q80TE7|LRRC7_MOUSE Leucine-rich repeat-containing protein 7 OS=Mus musculus GN=Lrrc7
PE=1 SV=2
Length = 1490
Score = 32.3 bits (72), Expect = 0.82, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 16 PDKWKEGA--SNT----TEAGGRKVNENKLLSKKKRWTPYGNTKCIICKQQV 61
PD W +G+ NT EA G N N LLS K R P + +I ++++
Sbjct: 765 PDNWTDGSHYDNTGFVSEEAAGENANNNPLLSSKARSVPAHGRRPLIRQERI 816
>sp|P70587|LRRC7_RAT Leucine-rich repeat-containing protein 7 OS=Rattus norvegicus
GN=Lrrc7 PE=1 SV=2
Length = 1490
Score = 31.6 bits (70), Expect = 1.3, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 16 PDKWKEGA--SNT----TEAGGRKVNENKLLSKKKRWTPYGNTKCIICKQQV 61
PD W +G+ NT EA G N N LLS K R P + +I ++++
Sbjct: 765 PDNWTDGSHYDNTGFVSEEATGENANNNPLLSSKARSVPAHGRRPLIRQERI 816
>sp|P46671|FAR3_YEAST Factor arrest protein 3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=FAR3 PE=1 SV=2
Length = 204
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 10 LSKVIVPDKWKEGASN----TTEAGGRKVNENKLLSKKKRWTPYGNTKCIICKQQVHQDA 65
LSK I+PD WK+ AS TEA + ++EN L + Y NTK + +++
Sbjct: 51 LSKNIIPDSWKDNASQKASPPTEA-QKLISENFKLIYEIEKQEYFNTKAVALINNINEHF 109
Query: 66 KYC 68
Y
Sbjct: 110 SYI 112
>sp|Q9LUB7|OBE2_ARATH Protein OBERON 2 OS=Arabidopsis thaliana GN=OBE2 PE=1 SV=1
Length = 574
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 49 YGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMC 81
Y + I C+ Q+ D YC C KG C +C
Sbjct: 195 YKRCRNIACQNQLPADDCYCDICTNRKGFCNLC 227
>sp|Q8WHX1|YCF1_PSINU Putative membrane protein ycf1 OS=Psilotum nudum GN=ycf1 PE=3 SV=1
Length = 1703
Score = 29.6 bits (65), Expect = 5.2, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 9 KLSKVIVPDKWKEGASNTTEAGGRKVNEN---KLLSKKKRWTPYGNTKCIICKQQVHQDA 65
K+ IVP KWK ++ K+++N K L K+ +++ Y + KQ+++
Sbjct: 1246 KIEYGIVPQKWKNEVKKRWKSNTNKLDKNKEYKTLEKENKYSLYETNNML--KQRINNRN 1303
Query: 66 KYC 68
YC
Sbjct: 1304 NYC 1306
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.129 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,049,837
Number of Sequences: 539616
Number of extensions: 1320710
Number of successful extensions: 3172
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 3137
Number of HSP's gapped (non-prelim): 24
length of query: 96
length of database: 191,569,459
effective HSP length: 66
effective length of query: 30
effective length of database: 155,954,803
effective search space: 4678644090
effective search space used: 4678644090
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)