Query 034394
Match_columns 96
No_of_seqs 15 out of 17
Neff 2.0
Searched_HMMs 13730
Date Mon Mar 25 22:27:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034394.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/034394hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1pjaa_ c.69.1.13 (A:) Palmito 30.3 2.8 0.00021 24.1 -1.1 10 14-23 72-81 (268)
2 d1jh6a_ d.61.1.1 (A:) tRNA spl 27.3 21 0.0015 21.7 2.6 24 39-62 8-32 (181)
3 d1jmkc_ c.69.1.22 (C:) Surfact 26.3 3.3 0.00024 24.3 -1.4 10 14-23 74-83 (230)
4 d1snoa_ b.40.1.1 (A:) Staphylo 26.1 20 0.0015 21.0 2.3 22 25-46 90-111 (136)
5 d2i14a1 c.1.17.1 (A:111-389) N 25.2 11 0.0008 26.0 1.0 28 4-31 25-54 (279)
6 d1ispa_ c.69.1.18 (A:) Lipase 24.8 3.5 0.00025 25.1 -1.5 10 14-23 71-80 (179)
7 d1ex9a_ c.69.1.18 (A:) Lipase 22.9 4.7 0.00034 27.2 -1.3 11 14-24 77-87 (285)
8 d2b61a1 c.69.1.40 (A:2-358) Ho 21.2 4.4 0.00032 29.2 -1.8 16 10-25 133-148 (357)
9 d1brta_ c.69.1.12 (A:) Bromope 18.3 16 0.0012 21.1 0.6 8 15-22 94-101 (277)
10 d1xkta_ c.69.1.22 (A:) Fatty a 18.3 6 0.00043 22.7 -1.4 10 15-24 88-97 (286)
No 1
>d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.28 E-value=2.8 Score=24.06 Aligned_cols=10 Identities=30% Similarity=0.591 Sum_probs=8.3
Q ss_pred hhhhhccccc
Q 034394 14 SFVGNSMGGV 23 (96)
Q Consensus 14 sfi~n~mgG~ 23 (96)
.+||.||||.
T Consensus 72 ~lvGhS~GG~ 81 (268)
T d1pjaa_ 72 HLICYSQGGL 81 (268)
T ss_dssp EEEEETHHHH
T ss_pred EEEccccHHH
Confidence 5789999995
No 2
>d1jh6a_ d.61.1.1 (A:) tRNA splicing product Appr>p cyclic nucleotide phosphodiesterase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=27.28 E-value=21 Score=21.71 Aligned_cols=24 Identities=21% Similarity=0.504 Sum_probs=15.7
Q ss_pred eeeEEEcCchhhHHH-HHHHHHHHc
Q 034394 39 AYYLWVKPSQDLKRE-QEERAALAA 62 (96)
Q Consensus 39 AYylwvkPe~~~~~e-qe~RAAlA~ 62 (96)
-|++|..|+.+..++ ++....|+.
T Consensus 8 ~yslwl~P~~~~~~~l~~l~~~l~~ 32 (181)
T d1jh6a_ 8 VYSVWALPDEESEPRFKKLMEALRS 32 (181)
T ss_dssp EEEEEEEECTTTHHHHHHHHHHHHH
T ss_pred cEEEEEECCHHHHHHHHHHHHHHHH
Confidence 499999998875543 344445543
No 3
>d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]}
Probab=26.31 E-value=3.3 Score=24.30 Aligned_cols=10 Identities=30% Similarity=0.464 Sum_probs=8.4
Q ss_pred hhhhhccccc
Q 034394 14 SFVGNSMGGV 23 (96)
Q Consensus 14 sfi~n~mgG~ 23 (96)
.+||.||||+
T Consensus 74 ~lvGhS~GG~ 83 (230)
T d1jmkc_ 74 TLFGYSAGCS 83 (230)
T ss_dssp EEEEETHHHH
T ss_pred EEEeeccChH
Confidence 4689999995
No 4
>d1snoa_ b.40.1.1 (A:) Staphylococcal nuclease {Staphylococcus aureus [TaxId: 1280]}
Probab=26.11 E-value=20 Score=20.98 Aligned_cols=22 Identities=23% Similarity=0.176 Sum_probs=17.4
Q ss_pred CcchHHHHHHhhhheeeEEEcC
Q 034394 25 GGANLASWVVAGTLAYYLWVKP 46 (96)
Q Consensus 25 G~~nlAaW~VAG~lAYylwvkP 46 (96)
++.|++..+|.-|+|......+
T Consensus 90 ~g~~l~~~Lv~~G~A~~~~~~~ 111 (136)
T d1snoa_ 90 DGKMVNEALVRQGLAKVAYVYK 111 (136)
T ss_dssp TTEEHHHHHHHTTSCEECCCBT
T ss_pred ecchhHHHHHHCCCEEEeeecC
Confidence 5689999999999997654433
No 5
>d2i14a1 c.1.17.1 (A:111-389) Nicotinate-nucleotide pyrophosphorylase PF1904 {Pyrococcus furiosus [TaxId: 2261]}
Probab=25.21 E-value=11 Score=26.05 Aligned_cols=28 Identities=14% Similarity=0.303 Sum_probs=21.4
Q ss_pred hhhhhhhchhhhhhh--cccccCCcchHHH
Q 034394 4 SWRRTIGNLRSFVGN--SMGGVRGGANLAS 31 (96)
Q Consensus 4 ~wrrt~gn~rsfi~n--~mgG~RG~~nlAa 31 (96)
+=||+.+..+..++= .+|||.|.||+++
T Consensus 25 G~Rr~~~~~~~~~~~Aa~igG~~gtSnv~a 54 (279)
T d2i14a1 25 GIRHMHPAIAPMIDRAAFIGGCDGVSGVLG 54 (279)
T ss_dssp GGGGSCGGGHHHHHHHHHHTTCSEESBHHH
T ss_pred CCCCCChhhHHHhCCcEEEeCeeeeehHHH
Confidence 457888888777653 3699999999875
No 6
>d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]}
Probab=24.80 E-value=3.5 Score=25.06 Aligned_cols=10 Identities=50% Similarity=0.880 Sum_probs=8.7
Q ss_pred hhhhhccccc
Q 034394 14 SFVGNSMGGV 23 (96)
Q Consensus 14 sfi~n~mgG~ 23 (96)
.+||.||||+
T Consensus 71 ~lvGHSmGG~ 80 (179)
T d1ispa_ 71 DIVAHSMGGA 80 (179)
T ss_dssp EEEEETHHHH
T ss_pred EEEeecCcCH
Confidence 5789999997
No 7
>d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=22.86 E-value=4.7 Score=27.24 Aligned_cols=11 Identities=36% Similarity=0.785 Sum_probs=9.0
Q ss_pred hhhhhcccccC
Q 034394 14 SFVGNSMGGVR 24 (96)
Q Consensus 14 sfi~n~mgG~R 24 (96)
.+||.||||+-
T Consensus 77 ~ligHS~GG~~ 87 (285)
T d1ex9a_ 77 NLIGHSHGGPT 87 (285)
T ss_dssp EEEEETTHHHH
T ss_pred EEEEECccHHH
Confidence 48999999963
No 8
>d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]}
Probab=21.17 E-value=4.4 Score=29.23 Aligned_cols=16 Identities=31% Similarity=0.856 Sum_probs=12.5
Q ss_pred hchhhhhhhcccccCC
Q 034394 10 GNLRSFVGNSMGGVRG 25 (96)
Q Consensus 10 gn~rsfi~n~mgG~RG 25 (96)
-.++..||.||||...
T Consensus 133 ~~l~~viG~SmGGmqA 148 (357)
T d2b61a1 133 SHLKAIIGGSFGGMQA 148 (357)
T ss_dssp CCEEEEEEETHHHHHH
T ss_pred ceEEEEecccHHHHHH
Confidence 3567789999999765
No 9
>d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]}
Probab=18.30 E-value=16 Score=21.12 Aligned_cols=8 Identities=50% Similarity=0.667 Sum_probs=6.7
Q ss_pred hhhhcccc
Q 034394 15 FVGNSMGG 22 (96)
Q Consensus 15 fi~n~mgG 22 (96)
.||.||||
T Consensus 94 lvGhS~G~ 101 (277)
T d1brta_ 94 LVGFSTGT 101 (277)
T ss_dssp EEEEGGGH
T ss_pred ccccccch
Confidence 58999996
No 10
>d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.25 E-value=6 Score=22.73 Aligned_cols=10 Identities=30% Similarity=0.418 Sum_probs=8.0
Q ss_pred hhhhcccccC
Q 034394 15 FVGNSMGGVR 24 (96)
Q Consensus 15 fi~n~mgG~R 24 (96)
++|.||||.-
T Consensus 88 lvGhS~Gg~v 97 (286)
T d1xkta_ 88 VAGYSYGACV 97 (286)
T ss_dssp EEEETHHHHH
T ss_pred EeecCCccHH
Confidence 6789999863
Done!