BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034396
MAWVLITDRGLKMMSNSLNSRDHRRSLPDIDYLDTHGTTSSDGMSSFLRHGGWTWGGGNL
SSMSASVSTLGDSGWLIHVQSILAGSAWIAAQIALE

High Scoring Gene Products

Symbol, full name Information P value
MTM1
myotubularin 1 		protein from Arabidopsis thaliana 1.1e-27
MTM2
myotubularin 2 		protein from Arabidopsis thaliana 6.1e-27

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034396
        (96 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2075850 - symbol:MTM1 "myotubularin 1" species...   320  1.1e-27   1
TAIR|locus:2184402 - symbol:MTM2 "myotubularin 2" species...   313  6.1e-27   1


>TAIR|locus:2075850 [details] [associations]
            symbol:MTM1 "myotubularin 1" species:3702 "Arabidopsis
            thaliana" [GO:0004725 "protein tyrosine phosphatase activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016311
            "dephosphorylation" evidence=IEA] [GO:0016791 "phosphatase
            activity" evidence=IEA] [GO:0004438
            "phosphatidylinositol-3-phosphatase activity" evidence=IDA]
            [GO:0052629 "phosphatidylinositol-3,5-bisphosphate 3-phosphatase
            activity" evidence=IDA] [GO:0007243 "intracellular protein kinase
            cascade" evidence=RCA] [GO:0043407 "negative regulation of MAP
            kinase activity" evidence=RCA] InterPro:IPR010569
            InterPro:IPR016130 InterPro:IPR017906 Pfam:PF06602 PROSITE:PS00383
            PROSITE:PS51339 EMBL:CP002686 Gene3D:2.30.29.30 InterPro:IPR011993
            GO:GO:0004725 GO:GO:0035335 InterPro:IPR004182 SMART:SM00568
            GO:GO:0004438 GO:GO:0052629 IPI:IPI00546922 RefSeq:NP_187666.5
            UniGene:At.46683 ProteinModelPortal:F4J3T8 SMR:F4J3T8 PRIDE:F4J3T8
            EnsemblPlants:AT3G10550.1 GeneID:820220 KEGG:ath:AT3G10550
            OMA:ACGCLWA Uniprot:F4J3T8
        Length = 840

 Score = 320 (117.7 bits), Expect = 1.1e-27, P = 1.1e-27
 Identities = 57/66 (86%), Positives = 63/66 (95%)

Query:    31 DYLDTHGTTSSDGMSSFLRHGGWTWGGGNLSSMSASVSTLGDSGWLIHVQSILAGSAWIA 90
             DYLD HGTTSSDG SSFLRHGGWTWGGGNLSSMSASVS LGDSGWLIH+QS+LAG+AWIA
Sbjct:   370 DYLDMHGTTSSDGRSSFLRHGGWTWGGGNLSSMSASVSLLGDSGWLIHIQSVLAGAAWIA 429

Query:    91 AQIALE 96
             A++A+E
Sbjct:   430 ARVAME 435


>TAIR|locus:2184402 [details] [associations]
            symbol:MTM2 "myotubularin 2" species:3702 "Arabidopsis
            thaliana" [GO:0004725 "protein tyrosine phosphatase activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016311
            "dephosphorylation" evidence=IEA] [GO:0016791 "phosphatase
            activity" evidence=IEA] [GO:0009627 "systemic acquired resistance"
            evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
            evidence=RCA] [GO:0032957 "inositol trisphosphate metabolic
            process" evidence=RCA] [GO:0046855 "inositol phosphate
            dephosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
            transport" evidence=RCA] [GO:0048527 "lateral root development"
            evidence=RCA] InterPro:IPR010569 InterPro:IPR016130
            InterPro:IPR017906 Pfam:PF06602 PROSITE:PS00383 PROSITE:PS51339
            EMBL:CP002688 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0004725
            GO:GO:0035335 InterPro:IPR004182 SMART:SM00568 IPI:IPI00530979
            RefSeq:NP_196074.2 UniGene:At.46239 EnsemblPlants:AT5G04540.1
            GeneID:830333 KEGG:ath:AT5G04540 OMA:NYSPIFL Uniprot:F4JWB3
        Length = 833

 Score = 313 (115.2 bits), Expect = 6.1e-27, P = 6.1e-27
 Identities = 57/66 (86%), Positives = 61/66 (92%)

Query:    31 DYLDTHGTTSSDGMSSFLRHGGWTWGGGNLSSMSASVSTLGDSGWLIHVQSILAGSAWIA 90
             DYLD HGTTSSDG SSFLRHGGWTWGGGNLSSMSASVS LGDSGWL H+QSILAG AWIA
Sbjct:   367 DYLDMHGTTSSDGTSSFLRHGGWTWGGGNLSSMSASVSVLGDSGWLSHIQSILAGVAWIA 426

Query:    91 AQIALE 96
             A++A+E
Sbjct:   427 ARVAME 432


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.129   0.407    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       96        96   0.00091  102 3  11 22  0.39    30
                                                     29  0.43    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  539 (57 KB)
  Total size of DFA:  115 KB (2076 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.00u 0.06s 10.06t   Elapsed:  00:00:23
  Total cpu time:  10.00u 0.06s 10.06t   Elapsed:  00:00:23
  Start:  Thu May  9 13:38:57 2013   End:  Thu May  9 13:39:20 2013

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