BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034410
(95 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1R3U|A Chain A, Crystal Structure Of Hypoxanthine-guanine
Phosphoribosyltransferase From Thermoanaerobacter
Tengcongensis
pdb|1R3U|B Chain B, Crystal Structure Of Hypoxanthine-guanine
Phosphoribosyltransferase From Thermoanaerobacter
Tengcongensis
pdb|1YFZ|A Chain A, Novel Imp Binding In Feedback Inhibition Of
Hypoxanthine-Guanine Phosphoribosyltransferase From
Thermoanaerobacter Tengcongensis
pdb|1YFZ|B Chain B, Novel Imp Binding In Feedback Inhibition Of
Hypoxanthine-Guanine Phosphoribosyltransferase From
Thermoanaerobacter Tengcongensis
Length = 205
Score = 99.0 bits (245), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 63/87 (72%), Gaps = 5/87 (5%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYF 68
VEDI+D+G TL+ L L+ + S+ +CT+LDKP RR+ V++ Y GF+ PD F
Sbjct: 124 VEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPERREADVKV-----DYCGFKIPDKF 178
Query: 69 VVGYGMDFAELYRNLPYVGVLKPECYK 95
VVGYG+D+AE YRNLP++GVLKPE YK
Sbjct: 179 VVGYGLDYAEKYRNLPFIGVLKPELYK 205
>pdb|2GEB|A Chain A, Crystal Structure Of The Thermoanaerobacter Tengcongensis
Hypoxanthine-Guanine Phosphoribosyltransferase L160i
Mutant: Insights Into The Inhibitor Design
Length = 185
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 63/87 (72%), Gaps = 5/87 (5%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYF 68
VEDI+D+G TL+ L L+ + S+ +CT+LDKP RR+ V++ Y GF+ PD F
Sbjct: 104 VEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPERREADVKV-----DYCGFKIPDKF 158
Query: 69 VVGYGMDFAELYRNLPYVGVLKPECYK 95
VVGYG+D+AE YRNLP++GVLKPE YK
Sbjct: 159 VVGYGIDYAEKYRNLPFIGVLKPELYK 185
>pdb|3H83|A Chain A, 2.06 Angstrom Resolution Structure Of A
Hypoxanthine-Guanine Phosphoribosyltransferase (Hpt-1)
From Bacillus Anthracis Str. 'ames Ancestor'
pdb|3H83|B Chain B, 2.06 Angstrom Resolution Structure Of A
Hypoxanthine-Guanine Phosphoribosyltransferase (Hpt-1)
From Bacillus Anthracis Str. 'ames Ancestor'
pdb|3H83|C Chain C, 2.06 Angstrom Resolution Structure Of A
Hypoxanthine-Guanine Phosphoribosyltransferase (Hpt-1)
From Bacillus Anthracis Str. 'ames Ancestor'
pdb|3H83|D Chain D, 2.06 Angstrom Resolution Structure Of A
Hypoxanthine-Guanine Phosphoribosyltransferase (Hpt-1)
From Bacillus Anthracis Str. 'ames Ancestor'
pdb|3HVU|A Chain A, 1.95 Angstrom Crystal Structure Of Complex Of
Hypoxanthine-Guanine Phosphoribosyltransferase From
Bacillus Anthracis With 2-(N- Morpholino)ethanesulfonic
Acid (Mes)
pdb|3HVU|B Chain B, 1.95 Angstrom Crystal Structure Of Complex Of
Hypoxanthine-Guanine Phosphoribosyltransferase From
Bacillus Anthracis With 2-(N- Morpholino)ethanesulfonic
Acid (Mes)
pdb|3HVU|C Chain C, 1.95 Angstrom Crystal Structure Of Complex Of
Hypoxanthine-Guanine Phosphoribosyltransferase From
Bacillus Anthracis With 2-(N- Morpholino)ethanesulfonic
Acid (Mes)
pdb|3HVU|D Chain D, 1.95 Angstrom Crystal Structure Of Complex Of
Hypoxanthine-Guanine Phosphoribosyltransferase From
Bacillus Anthracis With 2-(N- Morpholino)ethanesulfonic
Acid (Mes)
pdb|3KB8|A Chain A, 2.09 Angstrom Resolution Structure Of A
Hypoxanthine-Guanine Phosphoribosyltransferase (Hpt-1)
From Bacillus Anthracis Str. 'ames Ancestor' In Complex
With Gmp
pdb|3KB8|B Chain B, 2.09 Angstrom Resolution Structure Of A
Hypoxanthine-Guanine Phosphoribosyltransferase (Hpt-1)
From Bacillus Anthracis Str. 'ames Ancestor' In Complex
With Gmp
pdb|3KB8|C Chain C, 2.09 Angstrom Resolution Structure Of A
Hypoxanthine-Guanine Phosphoribosyltransferase (Hpt-1)
From Bacillus Anthracis Str. 'ames Ancestor' In Complex
With Gmp
pdb|3KB8|D Chain D, 2.09 Angstrom Resolution Structure Of A
Hypoxanthine-Guanine Phosphoribosyltransferase (Hpt-1)
From Bacillus Anthracis Str. 'ames Ancestor' In Complex
With Gmp
Length = 204
Score = 90.5 bits (223), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 56/86 (65%), Gaps = 5/86 (5%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYF 68
VEDI+D+G TLS L+ + A SV + TLLDKP RK+ ++ Y GF P F
Sbjct: 122 VEDIIDSGLTLSYLVDLFKYRKAKSVKIVTLLDKPTGRKVDLK-----ADYVGFTVPHEF 176
Query: 69 VVGYGMDFAELYRNLPYVGVLKPECY 94
VVGYG+D+ E YRNLPYVGVLKP Y
Sbjct: 177 VVGYGLDYKEQYRNLPYVGVLKPSVY 202
>pdb|3OHP|A Chain A, Crystal Structure Of Hgprt From Vibrio Cholerae
pdb|3OHP|B Chain B, Crystal Structure Of Hgprt From Vibrio Cholerae
pdb|3OHP|C Chain C, Crystal Structure Of Hgprt From Vibrio Cholerae
pdb|3OHP|D Chain D, Crystal Structure Of Hgprt From Vibrio Cholerae
Length = 177
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 57/83 (68%), Gaps = 5/83 (6%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYF 68
VEDI+DTG TL+ + L + S+ +CTLLDKP RR++ VE+ + GFE PD F
Sbjct: 97 VEDIIDTGNTLNKVKEILALREPKSIRICTLLDKPTRREVDVEV-----NWVGFEIPDEF 151
Query: 69 VVGYGMDFAELYRNLPYVGVLKP 91
VVG G+D+A+ YR+LPY+G + P
Sbjct: 152 VVGVGIDYAQKYRHLPYIGKVVP 174
>pdb|1G9S|A Chain A, Crystal Structure Of A Complex Between E.Coli Hprt And Imp
pdb|1G9S|B Chain B, Crystal Structure Of A Complex Between E.Coli Hprt And Imp
pdb|1G9T|A Chain A, Crystal Structure Of E.Coli Hprt-Gmp Complex
pdb|1G9T|B Chain B, Crystal Structure Of E.Coli Hprt-Gmp Complex
pdb|1GRV|A Chain A, Hypoxanthine Phosphoribosyltransferase From E. Coli
pdb|1GRV|B Chain B, Hypoxanthine Phosphoribosyltransferase From E. Coli
Length = 182
Score = 82.8 bits (203), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 56/79 (70%), Gaps = 5/79 (6%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYF 68
VEDI+D+G TLS + L + S+++CTLLDKP+RR++ V + + GF PD F
Sbjct: 102 VEDIIDSGNTLSKVREILSLREPKSLAICTLLDKPSRREVNVPVE-----FIGFSIPDEF 156
Query: 69 VVGYGMDFAELYRNLPYVG 87
VVGYG+D+A+ YR+LPY+G
Sbjct: 157 VVGYGIDYAQRYRHLPYIG 175
>pdb|1J7J|A Chain A, Crystal Structure Of The Hprt From Salmonella Typhimurium
pdb|1J7J|B Chain B, Crystal Structure Of The Hprt From Salmonella Typhimurium
Length = 178
Score = 82.4 bits (202), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 56/79 (70%), Gaps = 5/79 (6%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYF 68
VEDI+D+G TLS + L + S+++CTLLDKP+RR++ V + + GF PD F
Sbjct: 98 VEDIIDSGNTLSKVREILGLREPKSLAICTLLDKPSRREVDVPVE-----FVGFSIPDEF 152
Query: 69 VVGYGMDFAELYRNLPYVG 87
VVGYG+D+A+ YR+LPYVG
Sbjct: 153 VVGYGIDYAQRYRHLPYVG 171
>pdb|3O7M|A Chain A, 1.98 Angstrom Resolution Crystal Structure Of A
Hypoxanthine-Guanine Phosphoribosyltransferase (Hpt-2)
From Bacillus Anthracis Str. 'ames Ancestor'
pdb|3O7M|B Chain B, 1.98 Angstrom Resolution Crystal Structure Of A
Hypoxanthine-Guanine Phosphoribosyltransferase (Hpt-2)
From Bacillus Anthracis Str. 'ames Ancestor'
pdb|3O7M|C Chain C, 1.98 Angstrom Resolution Crystal Structure Of A
Hypoxanthine-Guanine Phosphoribosyltransferase (Hpt-2)
From Bacillus Anthracis Str. 'ames Ancestor'
pdb|3O7M|D Chain D, 1.98 Angstrom Resolution Crystal Structure Of A
Hypoxanthine-Guanine Phosphoribosyltransferase (Hpt-2)
From Bacillus Anthracis Str. 'ames Ancestor'
Length = 186
Score = 79.7 bits (195), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 55/87 (63%), Gaps = 6/87 (6%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYF 68
VEDI+D+G TL L + ++ CTLLDKP RRK V+L E Y GF+ PD F
Sbjct: 100 VEDIIDSGLTLHFLKDHFFMHKPKALKFCTLLDKPERRK--VDLTAE---YVGFQIPDEF 154
Query: 69 VVGYGMDFAELYRNLPYVG-VLKPECY 94
+VGYG+D AE YRNLP++ V+ E Y
Sbjct: 155 IVGYGIDCAEKYRNLPFIASVVTEESY 181
>pdb|3ACB|A Chain A, Crystal Structure Of Hypoxanthine-Guanine
Phosphoribosyltransferase From Thermus Thermophilus Hb8
pdb|3ACC|A Chain A, Crystal Structure Of Hypoxanthine-Guanine
Phosphoribosyltransferase With Gmp From Thermus
Thermophilus Hb8
pdb|3ACD|A Chain A, Crystal Structure Of Hypoxanthine-Guanine
Phosphoribosyltransferase With Imp From Thermus
Thermophilus Hb8
Length = 181
Score = 79.0 bits (193), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 56/84 (66%), Gaps = 5/84 (5%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYF 68
VEDIVDTG TLS L+ L ++ +SV V LL KP+RR+++V + Y GFE D +
Sbjct: 101 VEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKPSRRQVEVPI-----HYLGFEIEDAY 155
Query: 69 VVGYGMDFAELYRNLPYVGVLKPE 92
V GYG+D A+ RNLP++ ++PE
Sbjct: 156 VYGYGLDRAQFDRNLPFITSIRPE 179
>pdb|1HGX|A Chain A, Hypoxanthine-Guanine-Xanthine Phosphoribosyltransferase
(Hgxprtase)
pdb|1HGX|B Chain B, Hypoxanthine-Guanine-Xanthine Phosphoribosyltransferase
(Hgxprtase)
Length = 183
Score = 68.6 bits (166), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYF 68
VEDI+DTG T+ L+ NL + +S+ VCTL DK +K + Y GF + +
Sbjct: 101 VEDIIDTGLTMYQLLNNLQMRKPASLKVCTLCDKDIGKKAYDVPID----YCGFVVENRY 156
Query: 69 VVGYGMDFAELYRNLPYVGVLKPECY 94
++GYG DF YRNLP +G+LK Y
Sbjct: 157 IIGYGFDFHNKYRNLPVIGILKESVY 182
>pdb|1PZM|A Chain A, Crystal Structure Of Hgprt-Ase From Leishmania Tarentolae
In Complex With Gmp
pdb|1PZM|B Chain B, Crystal Structure Of Hgprt-Ase From Leishmania Tarentolae
In Complex With Gmp
Length = 211
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYF 68
VEDIVD+ TL L+ +++K +S+ LLDKP+ RK+ V LV Y P F
Sbjct: 124 VEDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKPSGRKVDV-LVD----YPVITIPRAF 178
Query: 69 VVGYGMDFAELYRNLPYVGVLKPECYK 95
V+GYGMDFAE YR L + VLK E Y+
Sbjct: 179 VIGYGMDFAESYRELRDICVLKKEYYE 205
>pdb|1HMP|A Chain A, The Crystal Structure Of Human Hypoxanthine-Guanine
Phosphoribosyltransferase With Bound Gmp
pdb|1HMP|B Chain B, The Crystal Structure Of Human Hypoxanthine-Guanine
Phosphoribosyltransferase With Bound Gmp
pdb|1BZY|A Chain A, Human Hgprtase With Transition State Inhibitor
pdb|1BZY|B Chain B, Human Hgprtase With Transition State Inhibitor
pdb|1BZY|C Chain C, Human Hgprtase With Transition State Inhibitor
pdb|1BZY|D Chain D, Human Hgprtase With Transition State Inhibitor
pdb|1Z7G|A Chain A, Free Human Hgprt
pdb|1Z7G|B Chain B, Free Human Hgprt
pdb|1Z7G|C Chain C, Free Human Hgprt
pdb|1Z7G|D Chain D, Free Human Hgprt
pdb|3GEP|A Chain A, Human Hypoxanthine Guanine Phosphoribosyltranserfase In
Complex With (S)-9-(3-Hydroxy-2-Phosphonylmethoxypropyl)
Guanine
pdb|3GEP|B Chain B, Human Hypoxanthine Guanine Phosphoribosyltranserfase In
Complex With (S)-9-(3-Hydroxy-2-Phosphonylmethoxypropyl)
Guanine
pdb|3GGC|A Chain A, Human Hypoxanthine-guanine Phosphoribosyltransferase In
Complex With 9-(2-phosphonoethoxyethyl)hypoxanthine
pdb|3GGC|B Chain B, Human Hypoxanthine-guanine Phosphoribosyltransferase In
Complex With 9-(2-phosphonoethoxyethyl)hypoxanthine
pdb|3GGJ|A Chain A, Human Hypoxanthine-guanine Phosphoribosyltransferase In
Complex With 9-(2-phosphonoethoxyethyl)guanine
pdb|3GGJ|B Chain B, Human Hypoxanthine-guanine Phosphoribosyltransferase In
Complex With 9-(2-phosphonoethoxyethyl)guanine
Length = 217
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYF 68
VEDI+DTG T+ +L++ + V V +LL K R VG + GFE PD F
Sbjct: 132 VEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRTPRS-----VGYKPDFVGFEIPDKF 186
Query: 69 VVGYGMDFAELYRNLPYVGVL 89
VVGY +D+ E +R+L +V V+
Sbjct: 187 VVGYALDYNEYFRDLNHVCVI 207
>pdb|1D6N|A Chain A, Ternary Complex Structure Of Human Hgprtase, Prpp, Mg2+,
And The Inhibitor Hpp Reveals The Involvement Of The
Flexible Loop In Substrate Binding
pdb|1D6N|B Chain B, Ternary Complex Structure Of Human Hgprtase, Prpp, Mg2+,
And The Inhibitor Hpp Reveals The Involvement Of The
Flexible Loop In Substrate Binding
Length = 214
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYF 68
VEDI+DTG T+ +L++ + V V +LL K R VG + GFE PD F
Sbjct: 129 VEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRTPRS-----VGYKPDFVGFEIPDKF 183
Query: 69 VVGYGMDFAELYRNLPYVGVL 89
VVGY +D+ E +R+L +V V+
Sbjct: 184 VVGYALDYNEYFRDLNHVCVI 204
>pdb|1TC1|A Chain A, A 1.4 Angstrom Crystal Structure For The Hypoxanthine
Phosphoribosyltransferase Of Trypanosoma Cruzi
pdb|1TC1|B Chain B, A 1.4 Angstrom Crystal Structure For The Hypoxanthine
Phosphoribosyltransferase Of Trypanosoma Cruzi
Length = 220
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYF 68
VEDIVDT TL+ L ++ +S+ LLDK R++ Y P+ F
Sbjct: 109 VEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKREGRRVPF-----SADYVVANIPNAF 163
Query: 69 VVGYGMDFAELYRNLPYVGVLKPECY 94
V+GYG+D+ + YR L + VL+PE Y
Sbjct: 164 VIGYGLDYDDTYRELRDIVVLRPEVY 189
>pdb|1TC2|A Chain A, Ternary Substrate Complex Of The Hypoxanthine
Phosphoribosyltransferase From Trypanosoma Cruzi
pdb|1TC2|B Chain B, Ternary Substrate Complex Of The Hypoxanthine
Phosphoribosyltransferase From Trypanosoma Cruzi
pdb|1P19|A Chain A, Hypoxanthine Phosphoribosyltransferase From Trypanosoma
Cruzi, In Complex With The Product Imp
pdb|1P19|B Chain B, Hypoxanthine Phosphoribosyltransferase From Trypanosoma
Cruzi, In Complex With The Product Imp
pdb|1P19|C Chain C, Hypoxanthine Phosphoribosyltransferase From Trypanosoma
Cruzi, In Complex With The Product Imp
pdb|1P19|D Chain D, Hypoxanthine Phosphoribosyltransferase From Trypanosoma
Cruzi, In Complex With The Product Imp
Length = 221
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYF 68
VEDIVDT TL+ L ++ +S+ LLDK R++ Y P+ F
Sbjct: 110 VEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKREGRRVPF-----SADYVVANIPNAF 164
Query: 69 VVGYGMDFAELYRNLPYVGVLKPECY 94
V+GYG+D+ + YR L + VL+PE Y
Sbjct: 165 VIGYGLDYDDTYRELRDIVVLRPEVY 190
>pdb|1P17|A Chain A, Hypoxanthine Phosphoribosyltransferase From Trypanosoma
Cruzi, K68r Mutant, Complexed With The Product Imp
pdb|1P17|B Chain B, Hypoxanthine Phosphoribosyltransferase From Trypanosoma
Cruzi, K68r Mutant, Complexed With The Product Imp
pdb|1P17|C Chain C, Hypoxanthine Phosphoribosyltransferase From Trypanosoma
Cruzi, K68r Mutant, Complexed With The Product Imp
pdb|1P17|D Chain D, Hypoxanthine Phosphoribosyltransferase From Trypanosoma
Cruzi, K68r Mutant, Complexed With The Product Imp
pdb|1P18|A Chain A, Hypoxanthine Phosphoribosyltransferase From Trypanosoma
Cruzi, K68r Mutant, Ternary Substrates Complex
pdb|1P18|B Chain B, Hypoxanthine Phosphoribosyltransferase From Trypanosoma
Cruzi, K68r Mutant, Ternary Substrates Complex
Length = 221
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYF 68
VEDIVDT TL+ L ++ +S+ LLDK R++ Y P+ F
Sbjct: 110 VEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKREGRRVPF-----SADYVVANIPNAF 164
Query: 69 VVGYGMDFAELYRNLPYVGVLKPECY 94
V+GYG+D+ + YR L + VL+PE Y
Sbjct: 165 VIGYGLDYDDTYRELRDIVVLRPEVY 190
>pdb|2JBH|A Chain A, Human Phosphoribosyl Transferase Domain Containing 1
pdb|2JBH|B Chain B, Human Phosphoribosyl Transferase Domain Containing 1
Length = 225
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYF 68
VED+V TG T+ +L++N+ + + V +LL K R G Y GFE P+ F
Sbjct: 140 VEDVVGTGRTMKALLSNIEKYKPNMIKVASLLVKRTSRS-----DGFRPDYAGFEIPNLF 194
Query: 69 VVGYGMDFAELYRNLPYVGVLK 90
VVGY +D+ E +R+L ++ V+
Sbjct: 195 VVGYALDYNEYFRDLNHICVIN 216
>pdb|1I0L|A Chain A, Analysis Of An Invariant Aspartic Acid In Hprts-Asparagine
Mutant
pdb|1I0L|B Chain B, Analysis Of An Invariant Aspartic Acid In Hprts-Asparagine
Mutant
Length = 221
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYF 68
VEDIV+T TL+ L ++ +S+ LLDK R++ Y P+ F
Sbjct: 110 VEDIVNTALTLNYLYHMYFTRRPASLKTVVLLDKREGRRVPF-----SADYVVANIPNAF 164
Query: 69 VVGYGMDFAELYRNLPYVGVLKPECY 94
V+GYG+D+ + YR L + VL+PE Y
Sbjct: 165 VIGYGLDYDDTYRELRDIVVLRPEVY 190
>pdb|1I14|A Chain A, Analysis Of An Invariant Aspartic Acid In Hprts-Glutamic
Acid Mutant
pdb|1I14|B Chain B, Analysis Of An Invariant Aspartic Acid In Hprts-Glutamic
Acid Mutant
Length = 221
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYF 68
VEDIV+T TL+ L ++ +S+ LLDK R++ Y P+ F
Sbjct: 110 VEDIVETALTLNYLYHMYFTRRPASLKTVVLLDKREGRRVPF-----SADYVVANIPNAF 164
Query: 69 VVGYGMDFAELYRNLPYVGVLKPECY 94
V+GYG+D+ + YR L + VL+PE Y
Sbjct: 165 VIGYGLDYDDTYRELRDIVVLRPEVY 190
>pdb|1I0I|A Chain A, Analysis Of An Invariant Aspartic Acid In Hprts-Glutamine
Mutant
pdb|1I0I|B Chain B, Analysis Of An Invariant Aspartic Acid In Hprts-Glutamine
Mutant
Length = 221
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYF 68
VEDIV T TL+ L ++ +S+ LLDK R++ Y P+ F
Sbjct: 110 VEDIVQTALTLNYLYHMYFTRRPASLKTVVLLDKREGRRVPF-----SADYVVANIPNAF 164
Query: 69 VVGYGMDFAELYRNLPYVGVLKPECY 94
V+GYG+D+ + YR L + VL+PE Y
Sbjct: 165 VIGYGLDYDDTYRELRDIVVLRPEVY 190
>pdb|1I13|A Chain A, Analysis Of An Invariant Aspartic Acid In Hprts-Alanine
Mutant
pdb|1I13|B Chain B, Analysis Of An Invariant Aspartic Acid In Hprts-Alanine
Mutant
Length = 221
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYF 68
VEDIV T TL+ L ++ +S+ LLDK R++ Y P+ F
Sbjct: 110 VEDIVATALTLNYLYHMYFTRRPASLKTVVLLDKREGRRVPF-----SADYVVANIPNAF 164
Query: 69 VVGYGMDFAELYRNLPYVGVLKPECY 94
V+GYG+D+ + YR L + VL+PE Y
Sbjct: 165 VIGYGLDYDDTYRELRDIVVLRPEVY 190
>pdb|2VFA|A Chain A, Crystal Structure Of A Chimera Of Plasmodium Falciparum
And Human Hypoxanthine-Guanine Phosphoribosyl
Transferases
pdb|2VFA|B Chain B, Crystal Structure Of A Chimera Of Plasmodium Falciparum
And Human Hypoxanthine-Guanine Phosphoribosyl
Transferases
Length = 229
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDK--PARRKIQVELVGEGKFYRGFECPD 66
VEDI+DTG T+ +L++ + V V L K P + + VG F PD
Sbjct: 141 VEDIIDTGKTMQTLLSLVRQYNPKMVKVACLFIKRTPLWNGFKADFVG-------FSIPD 193
Query: 67 YFVVGYGMDFAELYRNLPYVGVLKPECYK 95
+FVVGY +D+ E++R+L + ++ E K
Sbjct: 194 HFVVGYSLDYNEIFRDLDHCCLVNDEGKK 222
>pdb|1QK3|A Chain A, Toxoplasma Gondii Hypoxanthine-Guanine
Phosphoribosyltransferase Gmp Complex
pdb|1QK3|B Chain B, Toxoplasma Gondii Hypoxanthine-Guanine
Phosphoribosyltransferase Gmp Complex
pdb|1QK3|C Chain C, Toxoplasma Gondii Hypoxanthine-Guanine
Phosphoribosyltransferase Gmp Complex
pdb|1QK3|D Chain D, Toxoplasma Gondii Hypoxanthine-Guanine
Phosphoribosyltransferase Gmp Complex
pdb|1QK4|A Chain A, Toxoplasma Gondii Hypoxanthine-Guanine
Phosphoribosyltransferase Imp Complex
pdb|1QK4|B Chain B, Toxoplasma Gondii Hypoxanthine-Guanine
Phosphoribosyltransferase Imp Complex
pdb|1QK4|C Chain C, Toxoplasma Gondii Hypoxanthine-Guanine
Phosphoribosyltransferase Imp Complex
pdb|1QK4|D Chain D, Toxoplasma Gondii Hypoxanthine-Guanine
Phosphoribosyltransferase Imp Complex
pdb|1FSG|A Chain A, Toxoplasma Gondii Hypoxanthine-Guanine
Phosphoribosyltransferase Complexed With 9-Deazaguanine,
Alpha-D-5-Phosphoribosyl-1- Pyrophosphate (Prpp) And Two
Mg2+ Ions
pdb|1FSG|C Chain C, Toxoplasma Gondii Hypoxanthine-Guanine
Phosphoribosyltransferase Complexed With 9-Deazaguanine,
Alpha-D-5-Phosphoribosyl-1- Pyrophosphate (Prpp) And Two
Mg2+ Ions
Length = 233
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYF 68
VEDIVDTG TL+ L + G S+ + TL++K R + +G F GF D +
Sbjct: 148 VEDIVDTGFTLTEFGERLKAVGPKSMRIATLVEKRTDRSNSL----KGDFV-GFSIEDVW 202
Query: 69 VVGYGMDFAELYRNLPYVGVLKPECYK 95
+VG DF E++R+ +V VL K
Sbjct: 203 IVGCCYDFNEMFRDFDHVAVLSDAARK 229
>pdb|1DBR|A Chain A, Hypoxanthine Guanine Xanthine
pdb|1DBR|B Chain B, Hypoxanthine Guanine Xanthine
pdb|1DBR|C Chain C, Hypoxanthine Guanine Xanthine
pdb|1DBR|D Chain D, Hypoxanthine Guanine Xanthine
Length = 231
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYF 68
VEDIVDTG TL+ L + G S+ + TL++K R + +G F GF D +
Sbjct: 145 VEDIVDTGFTLTEFGERLKAVGPKSMRIATLVEKRTDRSNSL----KGDFV-GFSIEDVW 199
Query: 69 VVGYGMDFAELYRNLPYVGVLKPECYK 95
+VG DF E++R+ +V VL K
Sbjct: 200 IVGCCYDFNEMFRDFDHVAVLSDAARK 226
>pdb|1CJB|A Chain A, Malarial Purine Phosphoribosyltransferase
pdb|1CJB|B Chain B, Malarial Purine Phosphoribosyltransferase
pdb|1CJB|C Chain C, Malarial Purine Phosphoribosyltransferase
pdb|1CJB|D Chain D, Malarial Purine Phosphoribosyltransferase
Length = 231
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDK--PARRKIQVELVGEGKFYRGFECPD 66
VEDI+DTG TL L +V++ L K P + + VG F PD
Sbjct: 143 VEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRTPLWNGFKADFVG-------FSIPD 195
Query: 67 YFVVGYGMDFAELYRNLPYVGVLKPE 92
+FVVGY +D+ E++R+L + ++ E
Sbjct: 196 HFVVGYSLDYNEIFRDLDHCCLVNDE 221
>pdb|3OZF|A Chain A, Crystal Structure Of Plasmodium Falciparum
Hypoxanthine-Guanine- Xanthine Phosphoribosyltransferase
In Complex With Hypoxanthine
pdb|3OZF|B Chain B, Crystal Structure Of Plasmodium Falciparum
Hypoxanthine-Guanine- Xanthine Phosphoribosyltransferase
In Complex With Hypoxanthine
pdb|3OZF|C Chain C, Crystal Structure Of Plasmodium Falciparum
Hypoxanthine-Guanine- Xanthine Phosphoribosyltransferase
In Complex With Hypoxanthine
pdb|3OZF|D Chain D, Crystal Structure Of Plasmodium Falciparum
Hypoxanthine-Guanine- Xanthine Phosphoribosyltransferase
In Complex With Hypoxanthine
pdb|3OZG|A Chain A, Crystal Structure Of Plasmodium Falciparum
Hypoxanthine-Guanine- Xanthine Phosphoribosyltransferase
In Complex With S-Serme-Immh Phosphonate
pdb|3OZG|B Chain B, Crystal Structure Of Plasmodium Falciparum
Hypoxanthine-Guanine- Xanthine Phosphoribosyltransferase
In Complex With S-Serme-Immh Phosphonate
pdb|3OZG|C Chain C, Crystal Structure Of Plasmodium Falciparum
Hypoxanthine-Guanine- Xanthine Phosphoribosyltransferase
In Complex With S-Serme-Immh Phosphonate
pdb|3OZG|D Chain D, Crystal Structure Of Plasmodium Falciparum
Hypoxanthine-Guanine- Xanthine Phosphoribosyltransferase
In Complex With S-Serme-Immh Phosphonate
Length = 250
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDK--PARRKIQVELVGEGKFYRGFECPD 66
VEDI+DTG TL L +V++ L K P + + VG F PD
Sbjct: 162 VEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRTPLWNGFKADFVG-------FSIPD 214
Query: 67 YFVVGYGMDFAELYRNLPYVGVLKPE 92
+FVVGY +D+ E++R+L + ++ E
Sbjct: 215 HFVVGYSLDYNEIFRDLDHCCLVNDE 240
>pdb|1QK5|A Chain A, Toxoplasma Gondii Hypoxanthine-Guanine
Phosphoribosyltransferase With Xmp, Pyrophosphate And
Two Mg2+ Ions
pdb|1QK5|B Chain B, Toxoplasma Gondii Hypoxanthine-Guanine
Phosphoribosyltransferase With Xmp, Pyrophosphate And
Two Mg2+ Ions
Length = 233
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYF 68
VEDIV TG TL+ L + G S+ + TL++K R ++ G F GF D +
Sbjct: 148 VEDIVATGFTLTEFGERLKAVGPKSMRIATLVEKRTDRSNSLK----GDFV-GFSIEDVW 202
Query: 69 VVGYGMDFAELYRNLPYVGVLKPECYK 95
+VG DF E++R+ +V VL K
Sbjct: 203 IVGCCYDFNEMFRDFDHVAVLSDAARK 229
>pdb|3FFS|A Chain A, The Crystal Structure Of Cryptosporidium Parvum
Inosine-5'- Monophosphate Dehydrogenase
pdb|3FFS|B Chain B, The Crystal Structure Of Cryptosporidium Parvum
Inosine-5'- Monophosphate Dehydrogenase
pdb|3FFS|C Chain C, The Crystal Structure Of Cryptosporidium Parvum
Inosine-5'- Monophosphate Dehydrogenase
pdb|3FFS|D Chain D, The Crystal Structure Of Cryptosporidium Parvum
Inosine-5'- Monophosphate Dehydrogenase
Length = 400
Score = 28.9 bits (63), Expect = 0.72, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 12 IVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEG--KFYRG 61
I D G S I ++ GASSV + ++L + EL+G+ K+YRG
Sbjct: 250 IADGGIRYSGDIGKALAVGASSVMIGSILAGTEESPGEKELIGDTVYKYYRG 301
>pdb|1DKR|A Chain A, Crystal Structures Of Bacillus Subtilis
Phosphoribosylpyrophosphate Synthetase: Molecular Basis
Of Allosteric Inhibition And Activation.
pdb|1DKR|B Chain B, Crystal Structures Of Bacillus Subtilis
Phosphoribosylpyrophosphate Synthetase: Molecular Basis
Of Allosteric Inhibition And Activation.
pdb|1DKU|A Chain A, Crystal Structures Of Bacillus Subtilis
Phosphoribosylpyrophosphate Synthetase: Molecular Basis
Of Allosteric Inhibition And Activation.
pdb|1DKU|B Chain B, Crystal Structures Of Bacillus Subtilis
Phosphoribosylpyrophosphate Synthetase: Molecular Basis
Of Allosteric Inhibition And Activation.
pdb|1IBS|A Chain A, Phosphoribosyldiphosphate Synthetase In Complex With
Cadmium Ions
pdb|1IBS|B Chain B, Phosphoribosyldiphosphate Synthetase In Complex With
Cadmium Ions
Length = 317
Score = 28.5 bits (62), Expect = 0.88, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCT---LLDKPARRKIQVELVGE 55
++DI+DT T++ LV GA V C +L PA +I + E
Sbjct: 223 IDDIIDTAGTITLAANALVENGAKEVYACCTHPVLSGPAVERINNSTIKE 272
>pdb|3KHJ|A Chain A, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
pdb|3KHJ|B Chain B, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
pdb|3KHJ|C Chain C, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
pdb|3KHJ|D Chain D, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
pdb|3KHJ|E Chain E, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
pdb|3KHJ|F Chain F, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
pdb|3KHJ|G Chain G, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
pdb|3KHJ|H Chain H, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
Length = 361
Score = 28.5 bits (62), Expect = 0.90, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 12 IVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEG--KFYRG 61
I D G S I ++ GASSV + ++L + EL+G+ K+YRG
Sbjct: 211 IADGGIRYSGDIGKALAVGASSVMIGSILAGTEESPGEKELIGDTVYKYYRG 262
>pdb|1VDM|A Chain A, Crystal Structure Of Purine Phosphoribosyltransferase From
Pyrococcus Horikoshii Ot3
pdb|1VDM|B Chain B, Crystal Structure Of Purine Phosphoribosyltransferase From
Pyrococcus Horikoshii Ot3
pdb|1VDM|C Chain C, Crystal Structure Of Purine Phosphoribosyltransferase From
Pyrococcus Horikoshii Ot3
pdb|1VDM|D Chain D, Crystal Structure Of Purine Phosphoribosyltransferase From
Pyrococcus Horikoshii Ot3
pdb|1VDM|E Chain E, Crystal Structure Of Purine Phosphoribosyltransferase From
Pyrococcus Horikoshii Ot3
pdb|1VDM|F Chain F, Crystal Structure Of Purine Phosphoribosyltransferase From
Pyrococcus Horikoshii Ot3
pdb|1VDM|G Chain G, Crystal Structure Of Purine Phosphoribosyltransferase From
Pyrococcus Horikoshii Ot3
pdb|1VDM|H Chain H, Crystal Structure Of Purine Phosphoribosyltransferase From
Pyrococcus Horikoshii Ot3
pdb|1VDM|I Chain I, Crystal Structure Of Purine Phosphoribosyltransferase From
Pyrococcus Horikoshii Ot3
pdb|1VDM|J Chain J, Crystal Structure Of Purine Phosphoribosyltransferase From
Pyrococcus Horikoshii Ot3
pdb|1VDM|K Chain K, Crystal Structure Of Purine Phosphoribosyltransferase From
Pyrococcus Horikoshii Ot3
pdb|1VDM|L Chain L, Crystal Structure Of Purine Phosphoribosyltransferase From
Pyrococcus Horikoshii Ot3
Length = 153
Score = 28.5 bits (62), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKP 43
V+D+ DTG TL +I + GA + + L KP
Sbjct: 89 VDDVSDTGKTLEVVIEEVKKLGAKEIKIACLAMKP 123
>pdb|3B13|A Chain A, Crystal Structure Of The Dhr-2 Domain Of Dock2 In Complex
With Rac1 (T17n Mutant)
pdb|3B13|C Chain C, Crystal Structure Of The Dhr-2 Domain Of Dock2 In Complex
With Rac1 (T17n Mutant)
Length = 431
Score = 27.7 bits (60), Expect = 1.6, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 15/84 (17%)
Query: 18 TLSSLIANLVSKGA---SSVSVCTLLDKPARRKI------QVELVGEGKFYRGF-----E 63
TL I KG ++S+C L + +I L+ + KFY
Sbjct: 88 TLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIMKILRP 147
Query: 64 CPDYFVVG-YGMDFAELYRNLPYV 86
PDYF VG YG F RN ++
Sbjct: 148 KPDYFAVGYYGQGFPSFLRNKVFI 171
>pdb|2YIN|A Chain A, Structure Of The Complex Between Dock2 And Rac1.
pdb|2YIN|B Chain B, Structure Of The Complex Between Dock2 And Rac1
Length = 436
Score = 27.7 bits (60), Expect = 1.6, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 15/84 (17%)
Query: 18 TLSSLIANLVSKGA---SSVSVCTLLDKPARRKI------QVELVGEGKFYRGF-----E 63
TL I KG ++S+C L + +I L+ + KFY
Sbjct: 93 TLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIMKILRP 152
Query: 64 CPDYFVVG-YGMDFAELYRNLPYV 86
PDYF VG YG F RN ++
Sbjct: 153 KPDYFAVGYYGQGFPSFLRNKVFI 176
>pdb|3QW4|B Chain B, Structure Of Leishmania Donovani Ump Synthase
pdb|3QW4|C Chain C, Structure Of Leishmania Donovani Ump Synthase
Length = 453
Score = 27.7 bits (60), Expect = 1.8, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDK 42
++D+V TG T I L S G VS+ L+D+
Sbjct: 371 IDDLVSTGETKVEAIEKLRSAGLEVVSIVVLVDR 404
>pdb|1GKT|A Chain A, Neutron Laue Diffraction Structure Of Endothiapepsin
Complexed With Transition State Analogue Inhibitor H261
Length = 329
Score = 27.3 bits (59), Expect = 2.1, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 3 TFLCSQVEDIVDTGTTLSSLIANLVSKGASSVS 35
TF + ++ I DTGTTL L A +VS + VS
Sbjct: 207 TFKSTSIDGIADTGTTLLYLPATVVSAYWAQVS 239
>pdb|1ER8|E Chain E, The Active Site Of Aspartic Proteinases
pdb|2ER0|E Chain E, X-Ray Studies Of Aspartic Proteinase-Statine Inhibitor
Complexes
pdb|2ER6|E Chain E, The Structure Of A Synthetic Pepsin Inhibitor Complexed
With Endothiapepsin.
pdb|2ER7|E Chain E, X-Ray Analyses Of Aspartic Proteinases.Iii.
Three-Dimensional Structure Of Endothiapepsin Complexed
With A Transition-State Isostere Inhibitor Of Renin At
1.6 Angstroms Resolution
pdb|2ER9|E Chain E, X-Ray Studies Of Aspartic Proteinase-Statine Inhibitor
Complexes.
pdb|3ER3|E Chain E, The Active Site Of Aspartic Proteinases
pdb|3ER5|E Chain E, The Active Site Of Aspartic Proteinases
pdb|4ER1|E Chain E, The Active Site Of Aspartic Proteinases
pdb|4ER2|E Chain E, The Active Site Of Aspartic Proteinases
pdb|4ER4|E Chain E, High-Resolution X-Ray Analyses Of Renin Inhibitor-Aspartic
Proteinase Complexes
pdb|5ER1|E Chain E, A Rational Approach To The Design Of Antihypertensives.
X-Ray Studies Of Complexes Between Aspartic Proteinases
And Aminoalcohol Renin Inhibitors
pdb|5ER2|E Chain E, High-Resolution X-Ray Diffraction Study Of The Complex
Between Endothiapepsin And An Oligopeptide Inhibitor.
The Analysis Of The Inhibitor Binding And Description Of
The Rigid Body Shift In The Enzyme
pdb|1EED|P Chain P, X-Ray Crystallographic Analysis Of Inhibition Of
Endothiapepsin By Cyclohexyl Renin Inhibitors
pdb|1ENT|E Chain E, X-Ray Analyses Of Aspartic Proteinases. The
Three-Dimensional Structure At 2.1 Angstroms Resolution
Of Endothiapepsin
pdb|1EPL|E Chain E, A Structural Comparison Of 21 Inhibitor Complexes Of The
Aspartic Proteinase From Endothia Parasitica
pdb|1EPM|E Chain E, A Structural Comparison Of 21 Inhibitor Complexes Of The
Aspartic Proteinase From Endothia Parasitica
pdb|1EPN|E Chain E, A Structural Comparison Of 21 Inhibitor Complexes Of The
Aspartic Proteinase From Endothia Parasitica
pdb|1EPO|E Chain E, Endothia Aspartic Proteinase (Endothiapepsin) Complexed
With Cp-81,282 (Mor Phe Nle Chf Nme)
pdb|1EPP|E Chain E, Endothia Aspartic Proteinase (endothiapepsin) Complexed
With Pd-130, 693 (mas Phe Lys+mtf Sta Mba)
pdb|1EPQ|E Chain E, Endothia Aspartic Proteinase (Endothiapepsin) Complexed
With Pd-133, 450 (Sot Phe Gly+scc Gcl)
pdb|1E5O|E Chain E, Endothiapepsin Complex With Inhibitor Db2
pdb|1E81|E Chain E, Endothiapepsin Complex With Renin Inhibitor
Merck-Kgaa-Emd61395
pdb|1E82|E Chain E, Endothiapepsin Complex With Renin Inhibitor
Merck-Kgaa-Emd59601
pdb|1E80|E Chain E, Endothiapepsin Complex With Renin Inhibitor
Merck-Kgaa-Emd56133
pdb|1OD1|A Chain A, Endothiapepsin Pd135,040 Complex
pdb|4APE|A Chain A, The Active Site Of Aspartic Proteinases
pdb|2V00|A Chain A, X-Ray Crystal Structure Of Endothiapepsin Complexed With
Compound 1
pdb|3LZY|A Chain A, Crystal Structure Of Endothiapesin In Complex With Xenon
pdb|3PB5|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PBD|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PBZ|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PCW|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PCZ|A Chain A, Endothiapepsin In Complex With Benzamidine
pdb|3PGI|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PRS|A Chain A, Endothiapepsin In Complex With Ritonavir
pdb|3PI0|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PLD|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PLL|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PM4|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PMU|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PMY|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PSY|A Chain A, Endothiapepsin In Complex With An Inhibitor Based On The
Gewald Reaction
pdb|3PWW|A Chain A, Endothiapepsin In Complex With Saquinavir
pdb|3Q6Y|A Chain A, Endothiapepsin In Complex With A Pyrrolidine Based
Inhibitor
pdb|3T6I|A Chain A, Endothiapepsin In Complex With An Azepin Derivative
pdb|3T7P|A Chain A, Endothiapepsin In Complex With A Hydrazide Derivative
pdb|3T7Q|A Chain A, Endothiapepsin In Complex With An Inhibitor Based On The
Gewald Reaction
pdb|3T7X|A Chain A, Endothiapepsin In Complex With An Inhibitor Based On The
Gewald Reaction
Length = 330
Score = 27.3 bits (59), Expect = 2.1, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 3 TFLCSQVEDIVDTGTTLSSLIANLVSKGASSVS 35
TF + ++ I DTGTTL L A +VS + VS
Sbjct: 208 TFKSTSIDGIADTGTTLLYLPATVVSAYWAQVS 240
>pdb|1GVT|A Chain A, Endothiapepsin Complex With Cp-80,794
pdb|1GVU|A Chain A, Endothiapepsin Complex With H189
pdb|1GVV|A Chain A, Five Atomic Resolution Structures Of Endothiapepsin
Inhibitor Complexes; Implications For The Aspartic
Proteinase Mechanism
pdb|1GVW|A Chain A, Endothiapepsin Complex With Pd-130,328
pdb|1GVX|A Chain A, Endothiapepsin Complexed With H256
pdb|1OEX|A Chain A, Atomic Resolution Structure Of Endothiapepsin In Complex
With A Hydroxyethylene Transition State Analogue
Inhibitor H261
pdb|2JJI|A Chain A, Endothiapepsin In Complex With A Gem-Diol Inhibitor.
pdb|2JJJ|A Chain A, Endothiapepsin In Complex With A Gem-Diol Inhibitor.
pdb|2VS2|A Chain A, Neutron Diffraction Structure Of Endothiapepsin In Complex
With A Gem- Diol Inhibitor.
pdb|3URJ|A Chain A, Type Iv Native Endothiapepsin
pdb|3URI|A Chain A, Endothiapepsin-Db5 Complex.
pdb|3URL|A Chain A, Endothiapepsin-Db6 Complex.
pdb|1OEW|A Chain A, Atomic Resolution Structure Of Native Endothiapepsin
Length = 329
Score = 27.3 bits (59), Expect = 2.1, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 3 TFLCSQVEDIVDTGTTLSSLIANLVSKGASSVS 35
TF + ++ I DTGTTL L A +VS + VS
Sbjct: 207 TFKSTSIDGIADTGTTLLYLPATVVSAYWAQVS 239
>pdb|1EPR|E Chain E, Endothia Aspartic Proteinase (Endothiapepsin) Complexed
With Pd-135, 040
Length = 330
Score = 27.3 bits (59), Expect = 2.1, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 3 TFLCSQVEDIVDTGTTLSSLIANLVSKGASSVS 35
TF + ++ I DTGTTL L A +VS + VS
Sbjct: 208 TFKSTSIDGIADTGTTLLYLPATVVSAYWAQVS 240
>pdb|1UZR|A Chain A, Crystal Structure Of The Class Ib Ribonucleotide Reductase
R2f-2 Subunit From Mycobacterium Tuberculosis
pdb|1UZR|B Chain B, Crystal Structure Of The Class Ib Ribonucleotide Reductase
R2f-2 Subunit From Mycobacterium Tuberculosis
pdb|1UZR|C Chain C, Crystal Structure Of The Class Ib Ribonucleotide Reductase
R2f-2 Subunit From Mycobacterium Tuberculosis
Length = 296
Score = 26.6 bits (57), Expect = 3.4, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 41 DKPARRKIQVELVGEGKFYRGFECPDYF 68
D+P +RK+ L+ FY GF P Y+
Sbjct: 150 DEPLKRKVASTLLESFLFYSGFYLPMYW 177
>pdb|2Z6J|A Chain A, Crystal Structure Of S. Pneumoniae Enoyl-acyl Carrier
Protein Reductase (fabk) In Complex With An Inhibitor
pdb|2Z6J|B Chain B, Crystal Structure Of S. Pneumoniae Enoyl-acyl Carrier
Protein Reductase (fabk) In Complex With An Inhibitor
Length = 332
Score = 25.8 bits (55), Expect = 5.8, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 13 VDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVE 51
VD G+ ++ IA LVSK ++ + L A +KIQ E
Sbjct: 275 VDGGSVMAGQIAGLVSKEETAEEILKDLYYGAAKKIQEE 313
>pdb|2I9U|A Chain A, Crystal Structure Of Guanine Deaminase From C.
Acetobutylicum With Bound Guanine In The Active Site
pdb|2I9U|B Chain B, Crystal Structure Of Guanine Deaminase From C.
Acetobutylicum With Bound Guanine In The Active Site
Length = 439
Score = 25.8 bits (55), Expect = 6.7, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 6/61 (9%)
Query: 18 TLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEG------KFYRGFECPDYFVVG 71
T LI +L+ G + V++ L K + ++ L+ G K + CPDY
Sbjct: 114 TYGRLIKDLIKNGTTRVALFATLHKDSTIELFNMLIKSGIGAYVGKVNMDYNCPDYLTEN 173
Query: 72 Y 72
Y
Sbjct: 174 Y 174
>pdb|1ORO|A Chain A, A Flexible Loop At The Dimer Interface Is A Part Of The
Active Site Of The Adjacent Monomer Of Escherichia Coli
Orotate Phosphoribosyltransferase
pdb|1ORO|B Chain B, A Flexible Loop At The Dimer Interface Is A Part Of The
Active Site Of The Adjacent Monomer Of Escherichia Coli
Orotate Phosphoribosyltransferase
Length = 213
Score = 25.8 bits (55), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 11/47 (23%), Positives = 24/47 (51%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGE 55
V+D++ GT + + + + GA+ V LD+ R + ++ + E
Sbjct: 123 VDDVITAGTAIRESMEIIQANGATLAGVLISLDRQERGRGEISAIQE 169
>pdb|1LH0|A Chain A, Crystal Structure Of Salmonella Typhimurium Omp Synthase
In Complex With Mgprpp And Orotate
pdb|1LH0|B Chain B, Crystal Structure Of Salmonella Typhimurium Omp Synthase
In Complex With Mgprpp And Orotate
pdb|1OPR|A Chain A, The Crystal Structure Of The Orotate
Phosphoribosyltransferase Complexed With Orotate And
Alpha-D-5-Phosphoribosyl-1-Pyrophosphate
Length = 213
Score = 25.8 bits (55), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 11/47 (23%), Positives = 24/47 (51%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGE 55
V+D++ GT + + + + GA+ V LD+ R + ++ + E
Sbjct: 123 VDDVITAGTAIRESMEIIQAHGATLAGVLISLDRQERGRGEISAIQE 169
>pdb|1STO|A Chain A, Crystal Structure Of Orotate Phosphoribosyltransferase
Length = 213
Score = 25.4 bits (54), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 11/47 (23%), Positives = 24/47 (51%)
Query: 9 VEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGE 55
V+D++ GT + + + + GA+ V LD+ R + ++ + E
Sbjct: 123 VDDVITAGTAIRESMEIIQAHGATLAGVLISLDRQERGRGEISAIQE 169
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.141 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,927,986
Number of Sequences: 62578
Number of extensions: 108488
Number of successful extensions: 254
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 190
Number of HSP's gapped (non-prelim): 45
length of query: 95
length of database: 14,973,337
effective HSP length: 62
effective length of query: 33
effective length of database: 11,093,501
effective search space: 366085533
effective search space used: 366085533
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 45 (21.9 bits)